RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC4B (Homo sapiens)

Ensembl gene IDs: ENSG00000131409

Ensembl transcript IDs: ENST00000389201.7, ENST00000599957.5, ENST00000600381.1, ENST00000652263.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGACCGCCGGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGA +
Preference number: 1 (lower is better)
Translates to: GTAGREQSRALGREL*RRVHLFSFEGGGVG
Trigger: TCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCCGGCGGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR CCA 90 bp AAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCT +
Preference number: 1 (lower is better)
Translates to: KAPLSPGRRRARNAW*ESEEETRRTQATSP
Trigger: AGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR CCA 90 bp GAGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTaGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCT +
Preference number: 1 (lower is better)
Translates to: EKAPLSPGRRRARNA*WESEEETRRTQATS
Trigger: AGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR TCA 90 bp GGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTaGGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAA +
Preference number: 1 (lower is better)
Translates to: GAGTGALATCPSLQF*GRRSGREGRASNCK
Trigger: TTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGGTCCGAGCCCCAGATaGGGCTGGAAGCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISGPSPR*GWKPPL
Trigger: GAGAGGTGGCTTCCAGCCCCATCTGGGGCTCGGACC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCGGGCCCGGAACGCTTaGTGGGAGAGCGAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISRARNA*WESEEE
Trigger: TTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCG...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGGGTCCGAGCCCCAGATaGGGCTGGAAGCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: WKAAGPERLVGERGGNAEGPSPR*GWKPPL
Trigger: GAGAGGTGGCTTCCAGCCCCATCTGGGGCTCGGACC...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGTCCGAGCCCCAGATaGGGCTGGAAGCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: AAGPERLVGERGGNAENSGPSPR*GWKPPL
Trigger: GAGAGGTGGCTTCCAGCCCCATCTGGGGCTCGGACC...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR GCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCTCTCCCCAATTCCCTaGGTGGTCCCAGAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LPSPGIGGGEARIPETPLLSPIP*VVPEGG
Trigger: CCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAG...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR CAA 90 bp GGAGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTaGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTC +
Preference number: 2 (lower is better)
Translates to: GESSSLPWKAAGPER*VGERGGNAENSGHF
Trigger: GAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACTCTCCCCAATTCCCTaGGTGGTCCCAGAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: AAGPERLVGERGGNAENSLSPIP*VVPEGG
Trigger: CCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACCACCCTGTCCTTACTaGGGGTCCGAGCCCCAGATG +
Preference number: 2 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRPPCPY*GSEPQM
Trigger: CATCTGGGGCTCGGACCCCCAGTAAGGACAGGGTGG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCAGAGACTCCGCTCCTaGAGCCCCACCCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: RRARNAWWESEEETRRTQQRLRS*SPTLSL
Trigger: TAAGGACAGGGTGGGGCTCCAGGAGCGGAGTCTCTG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR GCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACTCTCCCCAATTCCCTaGGTGGTCCCAGAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRLSPIP*VVPEGG
Trigger: CCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTAGCTCCTCTCTCCCCTaGAAGGCGGCGGGCCCGGAA +
Preference number: 2 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRSSSLP*KAAGPE
Trigger: TTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCT...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGCCACCCTGTCCTTACTaGGGGTCCGAGCCCCAGATG +
Preference number: 2 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEPPCPY*GSEPQM
Trigger: CATCTGGGGCTCGGACCCCCAGTAAGGACAGGGTGG...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACG +
Preference number: 2 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRARNAW*ESEEET
Trigger: CGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR TCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCAAACTGCAAAAACTaGACCGTAAAAGGAAGGTGT +
Preference number: 2 (lower is better)
Translates to: GREQSRALGRELWRRVHLSNCKN*TVKGRC
Trigger: ACACCTTCCTTTTACGGTTCAGTTTTTGCAGTTTGA...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGAGCAGAGCCGGGCGCTaGGACGGGAGCTCTGGCGAC +
Preference number: 2 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQSRAGR*DGSSGD
Trigger: GTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGCAGAGACTCCGCTCCTaGAGCCCCACCCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGQRLRS*SPTLSL
Trigger: TAAGGACAGGGTGGGGCTCCAGGAGCGGAGTCTCTG...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTC +
Preference number: 2 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGLGREL*RRVHLF
Trigger: GAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAG...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACG +
Preference number: 2 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQARNAW*ESEEET
Trigger: CGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTC +
Preference number: 2 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQLGREL*RRVHLF
Trigger: GAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAG...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CAA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGTCCCGTCACCGGGGATaGGCGGGGGTGAGGCGAGGA +
Preference number: 3 (lower is better)
Translates to: WKAAGPERLVGERGGNAESRHRG*AGVRRG
Trigger: TCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGA...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR CCA 72 bp CTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCC +
Preference number: 3 (lower is better)
Translates to: LSPGRRRARNAW*ESEEETRRTQA
Trigger: GGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR CCA 72 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGA +
Preference number: 3 (lower is better)
Translates to: GREQSRALGREL*RRVHLFSFEGG
Trigger: TCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR CCA 72 bp ATGGGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTaGTCCCAGAAGGTGGGCTGGGCTGTGGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: MGLEATSPQFPA*SQKVGWAVGGR
Trigger: CCTCCCTCCCACAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CAA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTCCCGTCACCGGGGATaGGCGGGGGTGAGGCGAGGA +
Preference number: 3 (lower is better)
Translates to: LVGERGGNAENSGHFSWVSRHRG*AGVRRG
Trigger: TCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTCCCGTCACCGGGGATaGGCGGGGGTGAGGCGAGGA +
Preference number: 3 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRSRHRG*AGVRRG
Trigger: TCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGCGGGCCCGGAACGCTaGGTGGGAGAGCGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRAGPER*VGERGG
Trigger: TCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CAA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGCGGGCCCGGAACGCTaGGTGGGAGAGCGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQAGPER*VGERGG
Trigger: TCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
3UTR-3UTR CAA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGTCCATCTCTTCAGTTTaGAGGGCGGAGGAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQSISSV*RAEEWE
Trigger: CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGA...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCAGGCCGGCGGGCGCATaGCAGCGGGCGCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRRPAGA*QRAQHV
Trigger: GACGTGCTGCGCCCGCTGTCATGCGCCCGCCGGCCT...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGGAGCGCGGGGCGGGTaGCGTGGTAGAAGACGAGGC +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISGARGG*RGRRRG
Trigger: GCCTCGTCTTCTACCACGGCACCCGCCCCGCGCTCC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCGCGGGCAGGGCCAGGTaGCTGTCCCCGCCCACACCA +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLAGRAR*LSPPTP
Trigger: TGGTGTGGGCGGGGACAGCCACCTGGCCCTGCCCGC...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCCGCAGCCCCCGCCGCTaGGGTTGCTGCTGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRRSPRR*GCCCSA
Trigger: CGCACTACAGCAGCAACCCCAGCGGCGGGGGCTGCG...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGGCTGGGCAGCCCGTTaGAGGCGCCCACCTCGATCT +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISGWAAR*RRPPRS
Trigger: AGATCGAGGTGGGCGCCTTCAACGGGCTGCCCAGCC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGGCGGTGCAGGGGCGTaGAGAGGTCGTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENGGAGA*RGRGAA
Trigger: CGCTGCCCCACGACCTCTTCACGCCCCTGCACCGCC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACCACGGCCGAGACGTTaGGCGTGGCCGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSPRPRR*AWPRRW
Trigger: CCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCCCGGCTGGCCTGGTTaGTGCAGGAGCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLPGWPG*CRSRPR
Trigger: CCGTGGCCTGCTCCTGCAGCAACCAGGCCAGCCGGG...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTACGCGCTCGAGGCGGTaGAGGGGCGTGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISTRSRR*RGVKRS
Trigger: CGACCTCTTCACGCCCCTGCACCGCCTCGAGCGCGT...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGCTCCGCGTGGACGCTaGGGGGAGCGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENAPRGR*GERGEG
Trigger: CCCCTCTCCTCGCTCCCCCCAGCGTCCACGCGGAGC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389201.7
ENST00000652263.1
CDS-3UTR CCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCTCCACGGTGCGCGTaGGCCCGTGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLSPRCA*ARGACG
Trigger: TCCACAAGCACCACGGGCCCACGCGCACCGTGGAGA...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGCGGGCAGGGCCAGGTaGCTGTCCCCGCCCACACCA +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENAGRAR*LSPPTP
Trigger: TGGTGTGGGCGGGGACAGCCACCTGGCCCTGCCCGC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCGGTGCCGCAGGTGCTTaGACGTGTCCGTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLGAAGA*TCPSGS
Trigger: TGATCCGGACGGACACGTTCAAGCACCTGCGGCACC...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGTATTCCAGCCGCTTaGGCTCGCCCAGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLCIPAA*ARPGPG
Trigger: GCCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACA...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCGCTTGCGCAGGCTGGTaGGACCCTGGAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLACAGW*DPGRSP
Trigger: CGGGCTCCTTCCAGGGTCTCACCAGCCTGCGCAAGC...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGGCCAGGGGTTGTGGTTaGGGTGCACGCGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEARGCG*GARARG
Trigger: GCCTCGAGCGCGTGCACCTCAACCACAACCCCTGGC...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCAGGTACTCGAAGGCCTaGGTGGGCACCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLRYSKA*VGTVVS
Trigger: GCTGACCACGGTGCCCACGCAGGCCTTCGAGTACCT...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCAGGTCCAGCCGGTTaGCCGACAGCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLSGPAG*PTAPAP
Trigger: AGGAGCTGGAGCTGTCGGGCAACCGGCTGGACCTGA...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACTCCAACACCACCACTaGCCCCAGGGCCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRLQHHH*PQGRPR
Trigger: GCGGGGGCGGCCCTGGGGGCAGTGGTGGTGTTGGAG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGGAGCGCGGGGCGGGTaGCGTGGTAGAAGACGAGGC +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQGARGG*RGRRRG
Trigger: GCCTCGTCTTCTACCACGGCACCCGCCCCGCGCTCC...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGGTGCGCGTGGGCCCGTaGTGCTTGTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEVRVGP*CLWSWC
Trigger: GCACCAGCTCCACAAGCACCACGGGCCCACGCGCAC...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTTCTCCACGGTGCGCGTaGGCCCGTGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISSPRCA*ARGACG
Trigger: TCCACAAGCACCACGGGCCCACGCGCACCGTGGAGA...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACGCAGCCCCCGCCGCTaGGGTTGCTGCTGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSRSPRR*GCCCSA
Trigger: CGCACTACAGCAGCAACCCCAGCGGCGGGGGCTGCG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCGCAGCCCCCGCCGCTaGGGTTGCTGCTGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQRSPRR*GCCCSA
Trigger: CGCACTACAGCAGCAACCCCAGCGGCGGGGGCTGCG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLARNAW*ESEEET
Trigger: CGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGC...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACAGCAGAGCCGGGCGCTaGGACGGGAGCTCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENSRAGR*DGSSGD
Trigger: GTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCT...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGCGAGGGCACGCGGTTaGAGGCGTAGGAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENARARG*RRRRGC
Trigger: GCATCCCCTCCTACGCCTTCAACCGCGTGCCCTCGC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTGTATTCCAGCCGCTTaGGCTCGCCCAGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRCIPAA*ARPGPG
Trigger: GCCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACA...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACAATGTAGCGCCCCTTaGGGCCGGCGGGCGCATGAC +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSQCSAP*GRRAHD
Trigger: GTCATGCGCCCGCCGGCCTCAAGGGGCGCTACATTG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCCGGGCGCATAGCAGGTaGAATGCGACTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLRAHSR*NATGPA
Trigger: AGCTGGACCAGTCGCATTTCACCTGCTATGCGCCCG...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGTGCCCGTGCGGCATTTaGGCTCGGCAGCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAECPCGI*ARQPCP
Trigger: AGGGCATGGCTGCCGAGCTCAAATGCCGCACGGGCA...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTTGGGCGTCAGCCAGTTaGCGGAGGTCATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISWASAS*RRSWRC
Trigger: GCACCTCCATGACCTCCGTCAACTGGCTGACGCCCA...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCAGGAGCCGTGGGTCATaGGGGTGCCGTTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLRSRGS*GCRWAS
Trigger: TGACGCCCAACGGCACCCTCATGACCCACGGCTCCT...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGCGCAGGGCCTGGATTTaGGGCCGGGGGACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLRRAWI*GRGTPQ
Trigger: CTGCGGGGTCCCCCGGCCTCAAATCCAGGCCCTGCG...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599957.5
CDS-3UTR GCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACACGCGCTCGAGGCGGTaGAGGGGCGTGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENTRSRR*RGVKRS
Trigger: CGACCTCTTCACGCCCCTGCACCGCCTCGAGCGCGT...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCTCCTCTCCGGGCTaGGTCTCCAGGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQASSPG*VSRVST
Trigger: CGTGGAGACCCTGGAGACGCAGCCCGGAGAGGAGGC...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCCTCCTCTCCGGGCTaGGTCTCCAGGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSASSPG*VSRVST
Trigger: CGTGGAGACCCTGGAGACGCAGCCCGGAGAGGAGGC...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCGCGTGGGCCCGTGGTaGTTGTGGAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQRVGPW*LWSWCC
Trigger: GCAGCACCAGCTCCACAAGCACCACGGGCCCACGCG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRARNAW*ESEEET
Trigger: CGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGC...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCGGGCCCGGAACGCTTaGTGGGAGAGCGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLRARNA*WESEEE
Trigger: TTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCG...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGAGCTCCTCTCTCCCCTaGAAGGCGGCGGGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQSSSLP*KAAGPE
Trigger: TTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCT...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLLGREL*RRVHLF
Trigger: GAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAG...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAAGCAGAGCCGGGCGCTaGGACGGGAGCTCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRSRAGR*DGSSGD
Trigger: GTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCT...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCTACCTGGGCGTGCATaGGCCACAGCTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQLPGRA*ATACAG
Trigger: GCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCGCTCCTCCAGCGACTTaGGGTCGTCGAAGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLAPPAT*GRRRRC
Trigger: GCAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGC...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGGCGGTGCAGGGGCGTaGAGAGGTCGTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSGGAGA*RGRGAA
Trigger: CGCTGCCCCACGACCTCTTCACGCCCCTGCACCGCC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCTGGGCACCGTCTCCTTaGGCCACCAGCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLWAPSP*ATSSAR
Trigger: TCTGGCTGAGCTGGTGGCTCAAGGAGACGGTGCCCA...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCAGGCCGGCGGGCGCATaGCAGCGGGCGCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVRPAGA*QRAQHV
Trigger: GACGTGCTGCGCCCGCTGTCATGCGCCCGCCGGCCT...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTGCTGTAGTGCGCCTTaGAGGCGGCAGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRCCSAP*RRQPRS
Trigger: ACTACGTGGCTGCCGCCTTCAAGGCGCACTACAGCA...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCCAGGTCTCTCCGTGTaGAGATCACCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEPGLSV*RSPGWP
Trigger: AGGCCAGCCGGGTGATCTGCACACGGAGAGACCTGG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGTCCAGGTGCCGCAGGTaGTTGAACGTGTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAESRCRR*LNVSVR
Trigger: CCGGACGGACACGTTCAAGCACCTGCGGCACCTGGA...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAGGTACTCGAAGGCCTaGGTGGGCACCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAERYSKA*VGTVVS
Trigger: GCTGACCACGGTGCCCACGCAGGCCTTCGAGTACCT...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCTCAGGTCCAGCCGGTTaGCCGACAGCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLSGPAG*PTAPAP
Trigger: AGGAGCTGGAGCTGTCGGGCAACCGGCTGGACCTGA...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGGGTTGTGGTTGAGGTaGACGCGCTCGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQGLWLR*TRSRRC
Trigger: GCACCGCCTCGAGCGCGTGCACCTCAACCACAACCC...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCATGCAGGACGGAGATaGGCACGCGGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEHAGRR*ARGRSR
Trigger: ACGGCTCCTACCGCGTGCGCATCTCCGTCCTGCATG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCCGAGGCGGTGGTGTTaGCGGCTGAGTTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEPRRWC*RLSSSP
Trigger: TGGTGACGAACTCAGCCGGCAACACCACCGCCTCGG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCCCCCGCCTCGGACGGTaGGGCAGCGACCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSPRLGR*GSDREQ
Trigger: CTGCTCTCGGTCGCTGCCGCACCGTCCGAGGCGGGG...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCTCAGGAATTTGGGGTaGAAGGCCCGCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAELRNLG*KARCGE
Trigger: CTCCCCGCAGCGGGCCTTGCACCCCAAATTCCTGAG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652263.1
CDS-3UTR CCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCAGGGGATGCTCTCGATaGGGTTGTTCCGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLRGCSR*GCSAAR
Trigger: TCTGGCTGCGGAACAACCCCATCGAGAGCATCCCCT...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGGCGTGAAGAGGTCGTaGGGCAGCGACATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISGVKRS*GSDIRL
Trigger: CAACCTGATGTCGCTGCCCCACGACCTCTTCACGCC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGTGGCCGAGGCGGTaGTGTTGCCGGCTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRAWPRR*CCRLSS
Trigger: CGAACTCAGCCGGCAACACCACCGCCTCGGCCACGC...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCAGACACCGTCTGTCGTaGGCCCTGGCGGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRRHRLS*ALAVPS
Trigger: AGAAGGAACCGCCAGGGCCCACGACAGACGGTGTCT...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGTGCGCGTGGGCCCGTaGTGCTTGTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRVRVGP*CLWSWC
Trigger: GCACCAGCTCCACAAGCACCACGGGCCCACGCGCAC...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTCTCCACGGTGCGCGTaGGCCCGTGGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQSPRCA*ARGACG
Trigger: TCCACAAGCACCACGGGCCCACGCGCACCGTGGAGA...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGCGGGCAGGGCCAGGTaGCTGTCCCCGCCCACACCA +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSAGRAR*LSPPTP
Trigger: TGGTGTGGGCGGGGACAGCCACCTGGCCCTGCCCGC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGAGCTCCTCTCTCCCCTaGAAGGCGGCGGGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWSSSLP*KAAGPE
Trigger: TTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCT...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCATCAGGTACCGCGTGTTaGCCGGGATGCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSSGTAC*PGCWLG
Trigger: TCCCAGCCAGCATCCCGGTCAACACGCGGTACCTGA...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGTGCCGCAGGTGCTTaGACGTGTCCGTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSGAAGA*TCPSGS
Trigger: TGATCCGGACGGACACGTTCAAGCACCTGCGGCACC...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGGGCTGGGCAGCCCGTTaGAGGCGCCCACCTCGATCT +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLGWAAR*RRPPRS
Trigger: AGATCGAGGTGGGCGCCTTCAACGGGCTGCCCAGCC...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGGGCGGTGCAGGGGCGTaGAGAGGTCGTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEGGAGA*RGRGAA
Trigger: CGCTGCCCCACGACCTCTTCACGCCCCTGCACCGCC...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCCACGGCCGAGACGTTaGGCGTGGCCGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRPRPRR*AWPRRW
Trigger: CCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGCCACGGCCGAGACGTTaGGCGTGGCCGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEPRPRR*AWPRRW
Trigger: CCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGG...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACCCACGGTCACCGTGGTaGAGTAGGTGTAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENPRSPW*SRCSRH
Trigger: GTGGCGGCTACACCTACTTCACCACGGTGACCGTGG...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACGTAGTGGTGGTGGTTaGGGTGGTCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSRSGGG*GGLAPG
Trigger: CCCTGGAGCGAGACCACCTCAACCACCACCACTACG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACCGTAGTGGTGGTGGTTaGGGTGGTCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENRSGGG*GGLAPG
Trigger: CCCTGGAGCGAGACCACCTCAACCACCACCACTACG...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGTTCGTGGATGGAGTTaGGGCCAGGCGGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENVRGWS*GQAGLC
Trigger: GCAAAGGCCCGCCTGGCCTCAACTCCATCCACGAAC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCATCCTCAATGTTCATaGTCCGCGTGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISHPQCS*SAWTLG
Trigger: CCCCAGCGTCCACGCGGAGCATGAACATTGAGGATG...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACCAGGTCTCTCCGTGTaGAGATCACCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSPGLSV*RSPGWP
Trigger: AGGCCAGCCGGGTGATCTGCACACGGAGAGACCTGG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCCAGGTCTCTCCGTGTaGAGATCACCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQPGLSV*RSPGWP
Trigger: AGGCCAGCCGGGTGATCTGCACACGGAGAGACCTGG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTCCAGGTGCCGCAGGTaGTTGAACGTGTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQSRCRR*LNVSVR
Trigger: CCGGACGGACACGTTCAAGCACCTGCGGCACCTGGA...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGTGGCTACCTGGGCGTaGATGAGCCACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQVATWA*MSHSLR
Trigger: GCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCAC...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTGGCTACCTGGGCGTaGATGAGCCACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSVATWA*MSHSLR
Trigger: GCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCAC...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGGGTCGTCGAAGGCGTTaGGCTCGATGGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEGRRRR*ARWWLP
Trigger: AGGTAGCCACCATCGAGCGCAACGCCTTCGACGACC...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGACGCGCTCGAGGCGGTaGAGGGGCGTGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLTRSRR*RGVKRS
Trigger: CGACCTCTTCACGCCCCTGCACCGCCTCGAGCGCGT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCATGCAGGACGGAGATaGGCACGCGGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQHAGRR*ARGRSR
Trigger: ACGGCTCCTACCGCGTGCGCATCTCCGTCCTGCATG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACCGAGGCGGTGGTGTTaGCGGCTGAGTTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSPRRWC*RLSSSP
Trigger: TGGTGACGAACTCAGCCGGCAACACCACCGCCTCGG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTCCAACACCACCACTaGCCCCAGGGCCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVLQHHH*PQGRPR
Trigger: GCGGGGGCGGCCCTGGGGGCAGTGGTGGTGTTGGAG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAAGGTGTAGCCGCCACTaGCCCCTCCAACACCACCAC +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSRCSRH*PLQHHH
Trigger: GTGGTGGTGTTGGAGGGGGCAGTGGCGGCTACACCT...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGGAGCGCGGGGCGGGTaGCGTGGTAGAAGACGAGGC +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSGARGG*RGRRRG
Trigger: GCCTCGTCTTCTACCACGGCACCCGCCCCGCGCTCC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGGAGCTGGTGCTGCTTaGGCAGCTTGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISGAGAA*AACRRP
Trigger: TGGCCTTCTACAAGCTGCGCAAGCAGCACCAGCTCC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCGGAGCTGGTGCTGCTTaGGCAGCTTGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRGAGAA*AACRRP
Trigger: TGGCCTTCTACAAGCTGCGCAAGCAGCACCAGCTCC...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCCGCCGCCTCAGATCTaGGTCTCTTGCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEPPPQI*VSCTFS
Trigger: GGAGAACGTGCAAGAGACGCAGATCTGAGGCGGCGG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGCTCCGCGTGGACGCTaGGGGGAGCGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRAPRGR*GERGEG
Trigger: CCCCTCTCCTCGCTCCCCCCAGCGTCCACGCGGAGC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389201.7
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAAGAGCAATGCCCCGTaGGGCCAGGACATCCTACCG +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEKSNAP*GQDILP
Trigger: CGGTAGGATGTCCTGGCCCCACGGGGCATTGCTCTT...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCCTGCGTGGGCACCGTaGTCAGCCGGTTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISPAWAP*SAGCQK
Trigger: TTTTTGACAACCGGCTGACCACGGTGCCCACGCAGG...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACAGGCGTTGCGCTCGATaGTGGCTACCTGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENRRCAR*WLPGRA
Trigger: TGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCT...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCCACCCTGTCCTTACTaGGGGTCCGAGCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQPPCPY*GSEPQM
Trigger: CATCTGGGGCTCGGACCCCCAGTAAGGACAGGGTGG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACCCACCCTGTCCTTACTaGGGGTCCGAGCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENPPCPY*GSEPQM
Trigger: CATCTGGGGCTCGGACCCCCAGTAAGGACAGGGTGG...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGCCCGGAACGCTTGGTaGGAGAGCGAGGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENARNAW*ESEEET
Trigger: CGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGGGAAAGGACACCCCTaGAGAAAGCTCCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISGKGHP*RKLLSP
Trigger: GGGAGAGAGGAGCTTTCTCCAGGGGTGTCCTTTCCC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCGGGAAAGGACACCCCTaGAGAAAGCTCCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRGKGHP*RKLLSP
Trigger: GGGAGAGAGGAGCTTTCTCCAGGGGTGTCCTTTCCC...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLLGREL*RRVHLF
Trigger: GAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAG...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCTCCGCGTGGACGCTaGGGGGCTCTTAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRAPRGR*GALKTL
Trigger: CAGGGTCTTAAGAGCCCCCCAGCGTCCACGCGGAGC...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599957.5
3UTR CAA 72 bp TCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTaGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCA +
Preference number: 4 (lower is better)
Translates to: SSLPWKAAGPER*VGERGGNAENS
Trigger: TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGTCAGGTACCGCGTGTTaGCCGGGATGCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWSGTAC*PGCWLG
Trigger: TCCCAGCCAGCATCCCGGTCAACACGCGGTACCTGA...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGGCTGGGCAGCCCGTTaGAGGCGCCCACCTCGATCT +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSGWAAR*RRPPRS
Trigger: AGATCGAGGTGGGCGCCTTCAACGGGCTGCCCAGCC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGATGTATTCCAGCCGCTTaGGCTCGCCCAGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRCIPAA*ARPGPG
Trigger: GCCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACA...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGCTACCTGGGCGTGCATaGGCCACAGCTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLLPGRA*ATACAG
Trigger: GCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAG...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGTGGTGTTGCCGGCTaGGTTCGTCACCATGCACGT +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSGGVAG*VRHHAR
Trigger: ACGTGCATGGTGACGAACTCAGCCGGCAACACCACC...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCGTCGTCCAGGTCCTTaGGGGCGTTCTCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQRRPGP*GRSPSH
Trigger: ATGTGACGGAGAACGCCCTCAAGGACCTGGACGACG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACCGTCGTCCAGGTCCTTaGGGGCGTTCTCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENRRPGP*GRSPSH
Trigger: ATGTGACGGAGAACGCCCTCAAGGACCTGGACGACG...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGCGTAGTGGTGGTGGTTaGGGTGGTCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWRSGGG*GGLAPG
Trigger: CCCTGGAGCGAGACCACCTCAACCACCACCACTACG...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCAGAGCAGGTAGTCGTTaGCGCAAACCTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GREQSRALGRELWRRVHLRAGSR*RKPPFS
Trigger: ACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTCT...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCATCCTCAATGTTCATaGTCCGCGTGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAEHPQCS*SAWTLG
Trigger: CCCCAGCGTCCACGCGGAGCATGAACATTGAGGATG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCACCAGAGGAAGAGCAATaGCCCGTGGGGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSPEEEQ*PVGPGH
Trigger: ATGTCCTGGCCCCACGGGGCATTGCTCTTCCTCTGG...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTGGATGCCGTTCTCTTaGAGGTTCAGGTACCGCGTG +
Preference number: 4 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRWMPFS*RFRYRV
Trigger: CACGCGGTACCTGAACCTGCAAGAGAACGGCATCCA...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCGCCCACCTCGATCTTaGGCACCAGGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLRPPRS*APGSCS
Trigger: TGAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCG...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGAGGTACTCGAAGGCCTaGGTGGGCACCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWRYSKA*VGTVVS
Trigger: GCTGACCACGGTGCCCACGCAGGCCTTCGAGTACCT...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGGTCGTCGAAGGCGTTaGGCTCGATGGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENGRRRR*ARWWLP
Trigger: AGGTAGCCACCATCGAGCGCAACGCCTTCGACGACC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCTCTCCCCAATTCCCTaGGTGGTCCCAGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQLSPIP*VVPEGG
Trigger: CCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACCTCTCCCCAATTCCCTaGGTGGTCCCAGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENLSPIP*VVPEGG
Trigger: CCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAG...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGACTCGAAGGCCTGCGTaGGCACCGTGGTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLTRRPA*APWSAG
Trigger: ACCGGCTGACCACGGTGCCCACGCAGGCCTTCGAGT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCATCGATGGTGGCTACCTaGGCGTGCATGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSSMVAT*ACMSHS
Trigger: GCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGA...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAAGGCGTTGCGCTCGATaGTGGCTACCTGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRRRCAR*WLPGRA
Trigger: TGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCT...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGCGTGGCCGAGGCGGTaGTGTTGCCGGCTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSAWPRR*CCRLSS
Trigger: CGAACTCAGCCGGCAACACCACCGCCTCGGCCACGC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGGGCCCGTGGTGCTTGTaGAGCTGGTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLGPWCL*SWCCLR
Trigger: GCGCAAGCAGCACCAGCTCCACAAGCACCACGGGCC...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGTGCGCGTGGGCCCGTaGTGCTTGTGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSVRVGP*CLWSWC
Trigger: GCACCAGCTCCACAAGCACCACGGGCCCACGCGCAC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISKSRGS*MELRPG
Trigger: GCCTGGCCTCAACTCCATCCACGAACCTCTGCTCTT...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCGCCAGGGGTTGTGGTTaGGGTGCACGCGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVARGCG*GARARG
Trigger: GCCTCGAGCGCGTGCACCTCAACCACAACCCCTGGC...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCAATGTAGCGCCCCTTaGGGCCGGCGGGCGCATGAC +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRQCSAP*GRRAHD
Trigger: GTCATGCGCCCGCCGGCCTCAAGGGGCGCTACATTG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACGGGCGCATAGCAGGTaGAATGCGACTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRRAHSR*NATGPA
Trigger: AGCTGGACCAGTCGCATTTCACCTGCTATGCGCCCG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCCTTGGAGCCGCTCTTaGAGAGCAGAGGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQPWSRS*RAEVRG
Trigger: TCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTTGCGCACCAGGTTCTTaGTCAGCTGCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISCAPGS*SAAESP
Trigger: TGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCA...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGCGCCCACCTCGATCTTaGGCACCAGGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQRPPRS*APGSCS
Trigger: TGAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCG...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCACGTCGCAGTTGCAATaGCAGGGGTTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLTSQLQ*QGLWLR
Trigger: CCTCAACCACAACCCCTGGCATTGCAACTGCGACGT...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGCTGAGTTCGTCACCATaGACGTGTACTGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: WKAAGPERLVGERGGNAELSSSP*TCTGPC
Trigger: ACACGGGCCAGTACACGTGCATGGTGACGAACTCAG...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGAGGTGTAGCCGCCACTaGCCCCTCCAACACCACCAC +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLRCSRH*PLQHHH
Trigger: GTGGTGGTGTTGGAGGGGGCAGTGGCGGCTACACCT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGGCCTCCTCTCCGGGCTaGGTCTCCAGGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEASSPG*VSRVST
Trigger: CGTGGAGACCCTGGAGACGCAGCCCGGAGAGGAGGC...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGCGTGGGCCCGTGGTaGTTGTGGAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVRVGPW*LWSWCC
Trigger: GCAGCACCAGCTCCACAAGCACCACGGGCCCACGCG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCAGATCTGCGTCTCTTaGACGTTCTCCTTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LPSPGIGGGEARIPETPLQICVS*TFSLEP
Trigger: CGGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTG...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGCCGCCGCCTCAGATCTaGGTCTCTTGCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWPPPQI*VSCTFS
Trigger: GGAGAACGTGCAAGAGACGCAGATCTGAGGCGGCGG...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTCCGTCCGGATCACCTaGATGCCGTTCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQSVRIT*MPFSCR
Trigger: CCTGCAAGAGAACGGCATCCAGGTGATCCGGACGGA...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGGCGTGAAGAGGTCGTaGGGCAGCGACATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRGVKRS*GSDIRL
Trigger: CAACCTGATGTCGCTGCCCCACGACCTCTTCACGCC...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACAATGCCAGGGGTTGTaGTTGAGGTGCACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRQCQGL*LRCTRS
Trigger: CGAGCGCGTGCACCTCAACCACAACCCCTGGCATTG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGCAATGCCAGGGGTTGTaGTTGAGGTGCACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWQCQGL*LRCTRS
Trigger: CGAGCGCGTGCACCTCAACCACAACCCCTGGCATTG...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGGCGTGGCCGAGGCGGTaGTGTTGCCGGCTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEAWPRR*CCRLSS
Trigger: CGAACTCAGCCGGCAACACCACCGCCTCGGCCACGC...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAAGACACCGTCTGTCGTaGGCCCTGGCGGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRRHRLS*ALAVPS
Trigger: AGAAGGAACCGCCAGGGCCCACGACAGACGGTGTCT...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACAGAGACTCCGCTCCTaGAGCCCCACCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRQRLRS*SPTLSL
Trigger: TAAGGACAGGGTGGGGCTCCAGGAGCGGAGTCTCTG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTACCTGGGCGTGCATaGGCCACAGCTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVLPGRA*ATACAG
Trigger: GCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGCTCCTCCAGCGACTTaGGGTCGTCGAAGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSAPPAT*GRRRRC
Trigger: GCAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTGGGCACCGTCTCCTTaGGCCACCAGCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSWAPSP*ATSSAR
Trigger: TCTGGCTGAGCTGGTGGCTCAAGGAGACGGTGCCCA...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGAGGAGCCGTGGGTCATaGGGGTGCCGTTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWERSRGS*GCRWAS
Trigger: TGACGCCCAACGGCACCCTCATGACCCACGGCTCCT...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCCCACGGTCACCGTGGTaGAGTAGGTGTAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSPRSPW*SRCSRH
Trigger: GTGGCGGCTACACCTACTTCACCACGGTGACCGTGG...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGCGTCGTCCAGGTCCTTaGGGGCGTTCTCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLRRPGP*GRSPSH
Trigger: ATGTGACGGAGAACGCCCTCAAGGACCTGGACGACG...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACCTTGGAGCCGCTCTTaGAGAGCAGAGGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRPWSRS*RAEVRG
Trigger: TCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTTAAGACCCTGGCGATaGTCCAGCCCACACCCTCTT +
Preference number: 4 (lower is better)
Translates to: RRARNAWWESEEETRRTQLRPWR*SSPHPL
Trigger: AAGAGGGTGTGGGCTGGATCATCGCCAGGGTCTTAA...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599957.5
CDS-3UTR GCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTGGATGCCGTTCTCTTaGAGGTTCAGGTACCGCGTG +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENWMPFS*RFRYRV
Trigger: CACGCGGTACCTGAACCTGCAAGAGAACGGCATCCA...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTCCAGGTGCCGCAGGTaGTTGAACGTGTCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSSRCRR*LNVSVR
Trigger: CCGGACGGACACGTTCAAGCACCTGCGGCACCTGGA...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCATGCAGAATCTCCAGGTaGCGCAGGTGCTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSCRISR*RRCLNV
Trigger: CACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCA...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCGGGTTGTGGTTGAGGTaGACGCGCTCGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVGLWLR*TRSRRC
Trigger: GCACCGCCTCGAGCGCGTGCACCTCAACCACAACCC...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACAGAGCACGTCGCAGTTaGAATGCCAGGGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KAAGPERLVGERGGNAENRARRS*NARGCG
Trigger: ACCACAACCCCTGGCATTGCAACTGCGACGTGCTCT...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCCATGCAGGACGGAGATaGGCACGCGGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSHAGRR*ARGRSR
Trigger: ACGGCTCCTACCGCGTGCGCATCTCCGTCCTGCATG...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGATACTGGCCCGTGTCCTaGACGGTGACGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRYWPVS*TVTLVK
Trigger: CTTCACCAACGTCACCGTGCAGGACACGGGCCAGTA...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGATCCGTCCGGATCACCTaGATGCCGTTCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRSVRIT*MPFSCR
Trigger: CCTGCAAGAGAACGGCATCCAGGTGATCCGGACGGA...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGTGGTGCTTGTGGAGCTaGTGCTGCTTGCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWWCLWS*CCLRSL
Trigger: CAAGCTGCGCAAGCAGCACCAGCTCCACAAGCACCA...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCGGCCCGTGGTGCTTGTaGAGCTGGTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVGPWCL*SWCCLR
Trigger: GCGCAAGCAGCACCAGCTCCACAAGCACCACGGGCC...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGGGTCCGAGCCCCAGATaGGGCTGGAAGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEGPSPR*GWKPPL
Trigger: GAGAGGTGGCTTCCAGCCCCATCTGGGGCTCGGACC...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGGTCCGAGCCCCAGATaGGGCTGGAAGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRGPSPR*GWKPPL
Trigger: GAGAGGTGGCTTCCAGCCCCATCTGGGGCTCGGACC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCGGGCCCGGAACGCTTaGTGGGAGAGCGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRRARNA*WESEEE
Trigger: TTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGGGCCCGGAACGCTTaGTGGGAGAGCGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVRARNA*WESEEE
Trigger: TTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTCAGGTACCGCGTGTTaGCCGGGATGCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRSGTAC*PGCWLG
Trigger: TCCCAGCCAGCATCCCGGTCAACACGCGGTACCTGA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGAGGCCGGCGGGCGCATaGCAGCGGGCGCAGCACGTC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGRPAGA*QRAQHV
Trigger: GACGTGCTGCGCCCGCTGTCATGCGCCCGCCGGCCT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTGGGCGTCAGCCAGTTaGCGGAGGTCATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVWASAS*RRSWRC
Trigger: GCACCTCCATGACCTCCGTCAACTGGCTGACGCCCA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCCACGGTCACCGTGGTaGAGTAGGTGTAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRPRSPW*SRCSRH
Trigger: GTGGCGGCTACACCTACTTCACCACGGTGACCGTGG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGGTTCGTGGATGGAGTTaGGGCCAGGCGGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEVRGWS*GQAGLC
Trigger: GCAAAGGCCCGCCTGGCCTCAACTCCATCCACGAAC...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCGTTCGTGGATGGAGTTaGGGCCAGGCGGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVVRGWS*GQAGLC
Trigger: GCAAAGGCCCGCCTGGCCTCAACTCCATCCACGAAC...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAAGAGCAGGTAGTCGTTaGCGCAAACCTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AAGPERLVGERGGNAENSRAGSR*RKPPFS
Trigger: ACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTCT...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGCCCGGCTGGCCTGGTTaGTGCAGGAGCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGPGWPG*CRSRPR
Trigger: CCGTGGCCTGCTCCTGCAGCAACCAGGCCAGCCGGG...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGTGCAGAATCTCCAGGTaGCGCAGGTGCTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWCRISR*RRCLNV
Trigger: CACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCA...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTCAGGTCCAGCCGGTTaGCCGACAGCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVSGPAG*PTAPAP
Trigger: AGGAGCTGGAGCTGTCGGGCAACCGGCTGGACCTGA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGAGAGCACGTCGCAGTTaGAATGCCAGGGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWRARRS*NARGCG
Trigger: ACCACAACCCCTGGCATTGCAACTGCGACGTGCTCT...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCCGAGGCGGTGGTGTTaGCGGCTGAGTTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVPRRWC*RLSSSP
Trigger: TGGTGACGAACTCAGCCGGCAACACCACCGCCTCGG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGACAGATCTGCGTCTCTTaGACGTTCTCCTTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRQICVS*TFSLEP
Trigger: CGGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTG...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRKSRGS*MELRPG
Trigger: GCCTGGCCTCAACTCCATCCACGAACCTCTGCTCTT...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCCACCCTGTCCTTACTaGGGGTCCGAGCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRPPCPY*GSEPQM
Trigger: CATCTGGGGCTCGGACCCCCAGTAAGGACAGGGTGG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGCGAGGGCACGCGGTTaGAGGCGTAGGAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGARARG*RRRRGC
Trigger: GCATCCCCTCCTACGCCTTCAACCGCGTGCCCTCGC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGCTTGCGCAGGCTGGTaGGACCCTGGAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGACAGW*DPGRSP
Trigger: CGGGCTCCTTCCAGGGTCTCACCAGCCTGCGCAAGC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGCGGGCGCATAGCAGGTaGAATGCGACTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWERAHSR*NATGPA
Trigger: AGCTGGACCAGTCGCATTTCACCTGCTATGCGCCCG...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGATCCGGATCACCTGGATaGCGTTCTCTTGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRSGSPG*RSLAGS
Trigger: TGAACCTGCAAGAGAACGGCATCCAGGTGATCCGGA...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGACGTCGCAGTTGCAATaGCAGGGGTTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLTSQLQ*QGLWLR
Trigger: CCTCAACCACAACCCCTGGCATTGCAACTGCGACGT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTTAAGCGTGCCGTCATaGAGGACGGAGATGCGCACG +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSLSVPS*RTEMRT
Trigger: CGTGCGCATCTCCGTCCTGCATGACGGCACGCTTAA...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGCTCCAACACCACCACTaGCCCCAGGGCCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQLQHHH*PQGRPR
Trigger: GCGGGGGCGGCCCTGGGGGCAGTGGTGGTGTTGGAG...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGGAGCTGGTGCTGCTTaGGCAGCTTGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSGAGAA*AACRRP
Trigger: TGGCCTTCTACAAGCTGCGCAAGCAGCACCAGCTCC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTAAGAGCAATGCCCCGTaGGGCCAGGACATCCTACCG +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRKSNAP*GQDILP
Trigger: CGGTAGGATGTCCTGGCCCCACGGGGCATTGCTCTT...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTCGATGGTGGCTACCTaGGCGTGCATGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRSMVAT*ACMSHS
Trigger: GCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTCGATGGTGGCTACCTaGGCGTGCATGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVSMVAT*ACMSHS
Trigger: GCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGGCGTGAAGAGGTCGTaGGGCAGCGACATCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRGVKRS*GSDIRL
Trigger: CAACCTGATGTCGCTGCCCCACGACCTCTTCACGCC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGACCATGCACGTGTACTaGCCCGTGTCCTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWETMHVY*PVSCTV
Trigger: CACCGTGCAGGACACGGGCCAGTACACGTGCATGGT...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCAGAGACTCCGCTCCTaGAGCCCCACCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRQRLRS*SPTLSL
Trigger: TAAGGACAGGGTGGGGCTCCAGGAGCGGAGTCTCTG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGAGGAGCCGTGGGTCATaGGGGTGCCGTTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGRSRGS*GCRWAS
Trigger: TGACGCCCAACGGCACCCTCATGACCCACGGCTCCT...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGCCTTGGAGCCGCTCTTaGAGAGCAGAGGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEPWSRS*RAEVRG
Trigger: TCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGG...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGCCCGGCTGGCCTGGTTaGTGCAGGAGCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQPGWPG*CRSRPR
Trigger: CCGTGGCCTGCTCCTGCAGCAACCAGGCCAGCCGGG...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTGGATGCCGTTCTCTTaGAGGTTCAGGTACCGCGTG +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSWMPFS*RFRYRV
Trigger: CACGCGGTACCTGAACCTGCAAGAGAACGGCATCCA...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCAGGTTCTTGCTCAGCTaGAGAATCTCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSRFLLS*RISRCR
Trigger: GCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCT...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCGCCCACCTCGATCTTaGGCACCAGGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRRPPRS*APGSCS
Trigger: TGAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGGGTTGTGGTTGAGGTaGACGCGCTCGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGGLWLR*TRSRRC
Trigger: GCACCGCCTCGAGCGCGTGCACCTCAACCACAACCC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCAGAGCACGTCGCAGTTaGAATGCCAGGGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSRARRS*NARGCG
Trigger: ACCACAACCCCTGGCATTGCAACTGCGACGTGCTCT...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTTAAGCGTGCCGTCATaGAGGACGGAGATGCGCACG +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRLSVPS*RTEMRT
Trigger: CGTGCGCATCTCCGTCCTGCATGACGGCACGCTTAA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTTAAGCGTGCCGTCATaGAGGACGGAGATGCGCACG +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVLSVPS*RTEMRT
Trigger: CGTGCGCATCTCCGTCCTGCATGACGGCACGCTTAA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGTACTGGCCCGTGTCCTaGACGGTGACGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEYWPVS*TVTLVK
Trigger: CTTCACCAACGTCACCGTGCAGGACACGGGCCAGTA...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCCTGCGTGGGCACCGTaGTCAGCCGGTTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVPAWAP*SAGCQK
Trigger: TTTTTGACAACCGGCTGACCACGGTGCCCACGCAGG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTCCTGCGTGGGCACCGTaGTCAGCCGGTTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRPAWAP*SAGCQK
Trigger: TTTTTGACAACCGGCTGACCACGGTGCCCACGCAGG...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTAGGGGATGCTCTCGATaGGGTTGTTCCGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRRGCSR*GCSAAR
Trigger: TCTGGCTGCGGAACAACCCCATCGAGAGCATCCCCT...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCAGGGGATGCTCTCGATaGGGTTGTTCCGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVRGCSR*GCSAAR
Trigger: TCTGGCTGCGGAACAACCCCATCGAGAGCATCCCCT...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTGGTGCTTGTGGAGCTaGTGCTGCTTGCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVWCLWS*CCLRSL
Trigger: CAAGCTGCGCAAGCAGCACCAGCTCCACAAGCACCA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGGCCCGTGGTGCTTGTaGAGCTGGTGCTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGGPWCL*SWCCLR
Trigger: GCGCAAGCAGCACCAGCTCCACAAGCACCACGGGCC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSKSRGS*MELRPG
Trigger: GCCTGGCCTCAACTCCATCCACGAACCTCTGCTCTT...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCGGGAAAGGACACCCCTaGAGAAAGCTCCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVGKGHP*RKLLSP
Trigger: GGGAGAGAGGAGCTTTCTCCAGGGGTGTCCTTTCCC...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGCGAGGGCACGCGGTTaGAGGCGTAGGAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQARARG*RRRRGC
Trigger: GCATCCCCTCCTACGCCTTCAACCGCGTGCCCTCGC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGCTTGCGCAGGCTGGTaGGACCCTGGAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQACAGW*DPGRSP
Trigger: CGGGCTCCTTCCAGGGTCTCACCAGCCTGCGCAAGC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGCCAGGGGTTGTGGTTaGGGTGCACGCGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQARGCG*GARARG
Trigger: GCCTCGAGCGCGTGCACCTCAACCACAACCCCTGGC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGTGGGCACCGTCTCCTTaGGCCACCAGCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGWAPSP*ATSSAR
Trigger: TCTGGCTGAGCTGGTGGCTCAAGGAGACGGTGCCCA...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCAGAGCAGGTAGTCGTTaGCGCAAACCTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WWESEEETRRTQATSPGSRAGSR*RKPPFS
Trigger: ACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTCT...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTGCAGAATCTCCAGGTaGCGCAGGTGCTTGAACGTG +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVCRISR*RRCLNV
Trigger: CACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGACGTCGCAGTTGCAATaGCAGGGGTTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GSSGDVSISSVLRAEEWETSQLQ*QGLWLR
Trigger: CCTCAACCACAACCCCTGGCATTGCAACTGCGACGT...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTGAGTTCGTCACCATaGACGTGTACTGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVLSSSP*TCTGPC
Trigger: ACACGGGCCAGTACACGTGCATGGTGACGAACTCAG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCGCGTGGGCCCGTGGTaGTTGTGGAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGRVGPW*LWSWCC
Trigger: GCAGCACCAGCTCCACAAGCACCACGGGCCCACGCG...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGAGGCGTTGCGCTCGATaGTGGCTACCTGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGRRCAR*WLPGRA
Trigger: TGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCT...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGAGCTCCTCTCTCCCCTaGAAGGCGGCGGGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQSSSLP*KAAGPE
Trigger: TTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGTGCCCGTGCGGCATTTaGGCTCGGCAGCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQCPCGI*ARQPCP
Trigger: AGGGCATGGCTGCCGAGCTCAAATGCCGCACGGGCA...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGGTGGTGTTGCCGGCTaGGTTCGTCACCATGCACGT +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGGGVAG*VRHHAR
Trigger: ACGTGCATGGTGACGAACTCAGCCGGCAACACCACC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGTGCTGTAGTGCGCCTTaGAGGCGGCAGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGCCSAP*RRQPRS
Trigger: ACTACGTGGCTGCCGCCTTCAAGGCGCACTACAGCA...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTCCGGATCACCTGGATaGCGTTCTCTTGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LVGERGGNAENSGHFSWVSGSPG*RSLAGS
Trigger: TGAACCTGCAAGAGAACGGCATCCAGGTGATCCGGA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGAAGAGCAATGCCCCGTaGGGCCAGGACATCCTACCG +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGKSNAP*GQDILP
Trigger: CGGTAGGATGTCCTGGCCCCACGGGGCATTGCTCTT...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGACTCGAAGGCCTGCGTaGGCACCGTGGTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQTRRPA*APWSAG
Trigger: ACCGGCTGACCACGGTGCCCACGCAGGCCTTCGAGT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGACCATGCACGTGTACTaGCCCGTGTCCTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGTMHVY*PVSCTV
Trigger: CACCGTGCAGGACACGGGCCAGTACACGTGCATGGT...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGGCTCCTCCAGCGACTTaGGGTCGTCGAAGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGAPPAT*GRRRRC
Trigger: GCAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGC...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGTGGGCGTCAGCCAGTTaGCGGAGGTCATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGWASAS*RRSWRC
Trigger: GCACCTCCATGACCTCCGTCAACTGGCTGACGCCCA...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGCTACCTGGGCGTaGATGAGCCACAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQVATWA*MSHSLR
Trigger: GCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCAC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGTACTGGCCCGTGTCCTaGACGGTGACGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGYWPVS*TVTLVK
Trigger: CTTCACCAACGTCACCGTGCAGGACACGGGCCAGTA...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGAGGTGTAGCCGCCACTaGCCCCTCCAACACCACCAC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGRCSRH*PLQHHH
Trigger: GTGGTGGTGTTGGAGGGGGCAGTGGCGGCTACACCT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGTCCGTCCGGATCACCTaGATGCCGTTCTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGSVRIT*MPFSCR
Trigger: CCTGCAAGAGAACGGCATCCAGGTGATCCGGACGGA...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGTGCTGTAGTGCGCCTTaGAGGCGGCAGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGCCSAP*RRQPRS
Trigger: ACTACGTGGCTGCCGCCTTCAAGGCGCACTACAGCA...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGTCAAACTGCAAAAACTaGACCGTAAAAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWSNCKN*TVKGRC
Trigger: ACACCTTCCTTTTACGGTTCAGTTTTTGCAGTTTGA...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGCCAGAGGAAGAGCAATaGCCCGTGGGGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQPEEEQ*PVGPGH
Trigger: ATGTCCTGGCCCCACGGGGCATTGCTCTTCCTCTGG...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGAGGTTCTTGCTCAGCTaGAGAATCTCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGRFLLS*RISRCR
Trigger: GCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCT...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGGTCGTCGAAGGCGTTaGGCTCGATGGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQGRRRR*ARWWLP
Trigger: AGGTAGCCACCATCGAGCGCAACGCCTTCGACGACC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGCTGAGTTCGTCACCATaGACGTGTACTGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGLSSSP*TCTGPC
Trigger: ACACGGGCCAGTACACGTGCATGGTGACGAACTCAG...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCTCTCCCCAATTCCCTaGGTGGTCCCAGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGLSPIP*VVPEGG
Trigger: CCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAG...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGCAATGCCAGGGGTTGTaGTTGAGGTGCACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQQCQGL*LRCTRS
Trigger: CGAGCGCGTGCACCTCAACCACAACCCCTGGCATTG...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGACCATGCACGTGTACTaGCCCGTGTCCTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGTMHVY*PVSCTV
Trigger: CACCGTGCAGGACACGGGCCAGTACACGTGCATGGT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGAGACACCGTCTGTCGTaGGCCCTGGCGGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQRHRLS*ALAVPS
Trigger: AGAAGGAACCGCCAGGGCCCACGACAGACGGTGTCT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCTGGGACGGGAGCTCTaGCGACGTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGLGREL*RRVHLF
Trigger: GAAGAGATGGACACGTCGCCAGAGCTCCCGTCCCAG...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGCATCCTCAATGTTCATaGTCCGCGTGGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQHPQCS*SAWTLG
Trigger: CCCCAGCGTCCACGCGGAGCATGAACATTGAGGATG...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGAGGTTCTTGCTCAGCTaGAGAATCTCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGRFLLS*RISRCR
Trigger: GCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGATCTGCGTCTCTTaGACGTTCTCCTTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGQICVS*TFSLEP
Trigger: CGGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTG...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR TCA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTCAAACTGCAAAAACTaGACCGTAAAAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRSNCKN*TVKGRC
Trigger: ACACCTTCCTTTTACGGTTCAGTTTTTGCAGTTTGA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR GCA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGTGCGCACCAGGTTCTTaGTCAGCTGCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQCAPGS*SAAESP
Trigger: TGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCA...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 90 bp CGCTGCCGGTGCCCCCGGCCGCCACGGGGTCCACGGCCGAGACGTTaGGCGTGGCCGAGGCGGTGGTGTTGCCGGCTGAGTTCGTCACCA +
Preference number: 5 (lower is better)
Translates to: RCRCPRPPRGPRPRR*AWPRRWCCRLSSSP
Trigger: TGGTGACGAACTCAGCCGGCAACACCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGGACCCCGTGGCGGCCGGGGGCACCGGCAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 90 bp CCGTCTGTCGTGGGCCCTGGCGGTTCCTTCTCCGTCCCCCGCGGCTaGAGGGCCTCCTCTCCGGGCTGCGTCTCCAGGGTCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: PSVVGPGGSFSVPRG*RASSPGCVSRVSTV
Trigger: GACCGTGGAGACCCTGGAGACGCAGCCCGGAGAGGAGGCCCTGCAGCCGCGGGGGACGGAGAAGGAACCGCCAGGGCCCACGACAGACGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCCCGTCACCGGGGATaGGCGGGGGTGAGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLSRHRG*AGVRRG
Trigger: TCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGA...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCGCCGAGGCGGTGGTGTaGCCGGCTGAGTTCGTCACC +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLAEAVV*PAEFVT
Trigger: GGTGACGAACTCAGCCGGCAACACCACCGCCTCGGC...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGGCGCAGGGCCTGGATTaGAGGCCGGGGGACCCCGCA +
Preference number: 5 (lower is better)
Translates to: WKAAGPERLVGERGGNAEAQGLD*RPGDPA
Trigger: TGCGGGGTCCCCCGGCCTCAAATCCAGGCCCTGCGC...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599957.5
CDS TCA 90 bp CACCCTCTTAGCCAAAGGGCTGGCCCAAAGCGCAGGGCCTGGATTTaGGGCCGGGGGACCCCGCAGGGCCTGTGGGAGCCCACGGCACCC +
Preference number: 5 (lower is better)
Translates to: HPLSQRAGPKRRAWI*GRGTPQGLWEPTAP
Trigger: GGGTGCCGTGGGCTCCCACAGGCCCTGCGGGGTCCCCCGGCCTCAAATCCAGGCCCTGCGCTTTGGGCCAGCCCTTTGGCTAAGAGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599957.5
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCATCAGGTCCAGCCGGTaGCCCGACAGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLIRSSR*PDSSSS
Trigger: GGAGCTGGAGCTGTCGGGCAACCGGCTGGACCTGAT...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTATGCCCTCGGTGACGTaGAGGTCCGTGGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISMPSVT*RSVGGS
Trigger: GGAGCCGCCCACGGACCTCAACGTCACCGAGGGCAT...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTGCCGAGGCGGTGGTGTaGCCGGCTGAGTTCGTCACC +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISAEAVV*PAEFVT
Trigger: GGTGACGAACTCAGCCGGCAACACCACCGCCTCGGC...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCGTGGGCCCGTGGTGCTaGTGGAGCTGGTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLVGPWC*WSWCCL
Trigger: CAAGCAGCACCAGCTCCACAAGCACCACGGGCCCAC...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGGCGGGCCCGGAACGCTaGGTGGGAGAGCGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: WKAAGPERLVGERGGNAEAGPER*VGERGG
Trigger: TCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGC...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCGCGGGCCCGGAACGCTaGGTGGGAGAGCGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LPSPGIGGGEARIPETPLAGPER*VGERGG
Trigger: TCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGC...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGACCCGGCTGGCCTGGTaGCTGCAGGAGCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: RRARNAWWESEEETRRTQTRLAW*LQEQAT
Trigger: CGTGGCCTGCTCCTGCAGCAACCAGGCCAGCCGGGT...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCAGGTCGTCGAAGGCGTaGCGCTCGATGGTGGCTACC +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLRSSKA*RSMVAT
Trigger: GGTAGCCACCATCGAGCGCAACGCCTTCGACGACCT...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTTGCCAGGGGTTGTGGTaGAGGTGCACGCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISCQGLW*RCTRSR
Trigger: CCTCGAGCGCGTGCACCTCAACCACAACCCCTGGCA...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCATGCCCTCGGTGACGTaGAGGTCCGTGGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPSPGIGGGEARIPETPLMPSVT*RSVGGS
Trigger: GGAGCCGCCCACGGACCTCAACGTCACCGAGGGCAT...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCGTGGGCCCGTGGTGCTaGTGGAGCTGGTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRVGPWC*WSWCCL
Trigger: CAAGCAGCACCAGCTCCACAAGCACCACGGGCCCAC...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCCCGTCACCGGGGATaGGCGGGGGTGAGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: KAAGPERLVGERGGNAENSRHRG*AGVRRG
Trigger: TCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGA...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCAGGTGCCGCAGGTGCTaGAACGTGTCCGTCCGGATC +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRRCRRC*NVSVRI
Trigger: GATCCGGACGGACACGTTCAAGCACCTGCGGCACCT...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCAAAAGCTCCAGCGTGTaGAGGCTGGGCAGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLKSSSV*RLGSPL
Trigger: CAACGGGCTGCCCAGCCTCAACACGCTGGAGCTTTT...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTAGGTCGTCGAAGGCGTaGCGCTCGATGGTGGCTACC +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISRSSKA*RSMVAT
Trigger: GGTAGCCACCATCGAGCGCAACGCCTTCGACGACCT...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCCAGAGCACGTCGCAGTaGCAATGCCAGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GREQSRALGRELWRRVHLQSTSQ*QCQGLW
Trigger: CCACAACCCCTGGCATTGCAACTGCGACGTGCTCTG...GAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCGTCATGAGGGTGCCGTaGGGCGTCAGCCAGTTGACG +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRVMRVP*GVSQLT
Trigger: CGTCAACTGGCTGACGCCCAACGGCACCCTCATGAC...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGATCCCGTCACCGGGGATaGGCGGGGGTGAGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRSRHRG*AGVRRG
Trigger: TCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGA...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGTTCAGGTACCGCGTGTaGACCGGGATGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: WKAAGPERLVGERGGNAEFRYRV*TGMLAG
Trigger: CCCAGCCAGCATCCCGGTCAACACGCGGTACCTGAA...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTAAAAGCTCCAGCGTGTaGAGGCTGGGCAGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISKSSSV*RLGSPL
Trigger: CAACGGGCTGCCCAGCCTCAACACGCTGGAGCTTTT...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACATCAGGTCCAGCCGGTaGCCCGACAGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KAAGPERLVGERGGNAENIRSSR*PDSSSS
Trigger: GGAGCTGGAGCTGTCGGGCAACCGGCTGGACCTGAT...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCGCAGCACGTCGTGTaGCTGGGCACCGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RRARNAWWESEEETRRTQAQHVV*LGTVSL
Trigger: CAAGGAGACGGTGCCCAGCAACACGACGTGCTGCGC...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGTGCCCGTGCGGCATTaGAGCTCGGCAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRVPVRH*SSAAMP
Trigger: GGGCATGGCTGCCGAGCTCAAATGCCGCACGGGCAC...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTTTGGGCGTCAGCCAGTaGACGGAGGTCATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISLGVSQ*TEVMEV
Trigger: CACCTCCATGACCTCCGTCAACTGGCTGACGCCCAA...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 90 bp CCTCCTCTCCGGGCTGCGTCTCCAGGGTCTCCACGGTCACCGTGGTaGAGTAGGTGTAGCCGCCACTGCCCCCTCCAACACCACCACTGC +
Preference number: 5 (lower is better)
Translates to: PPLRAASPGSPRSPW*SRCSRHCPLQHHHC
Trigger: GCAGTGGTGGTGTTGGAGGGGGCAGTGGCGGCTACACCTACTTCACCACGGTGACCGTGGAGACCCTGGAGACGCAGCCCGGAGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCACCCGGCTGGCCTGGTaGCTGCAGGAGCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: WWESEEETRRTQATSPGSTRLAW*LQEQAT
Trigger: CGTGGCCTGCTCCTGCAGCAACCAGGCCAGCCGGGT...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCCGGGAGCAGAGCCGGGCGCTGGGACGGGAGCTCTGGCGACGTGTCCATCTCTCTGGATGCCGTTCTCTaGCAGGTTCAGGTACCGCGT +
Preference number: 5 (lower is better)
Translates to: AGSRAGRWDGSSGDVSISLDAVL*QVQVPR
Trigger: ACGCGGTACCTGAACCTGCAAGAGAACGGCATCCAG...AGAGATGGACACGTCGCCAGAGCTCCCGTCCCAGCGCCCGGCTCTGCTCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGCGCCCACCTCGATCTaGCGCACCAGGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KAAGPERLVGERGGNAENAPTSI*RTRFLL
Trigger: GAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCGC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTGCATGAGCCACAGCTaGCGCAGGCTGGTGAGACCC +
Preference number: 5 (lower is better)
Translates to: RRARNAWWESEEETRRTQCMSHS*RRLVRP
Trigger: GGGTCTCACCAGCCTGCGCAAGCTGTGGCTCATGCA...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGGTGCCCGTGCGGCATTaGAGCTCGGCAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLVPVRH*SSAAMP
Trigger: GGGCATGGCTGCCGAGCTCAAATGCCGCACGGGCAC...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGTCATGAGGGTGCCGTaGGGCGTCAGCCAGTTGACG +
Preference number: 5 (lower is better)
Translates to: AAGPERLVGERGGNAENSVMRVP*GVSQLT
Trigger: CGTCAACTGGCTGACGCCCAACGGCACCCTCATGAC...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTCCACGGCCGAGACGTaGAGCGTGGCCGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: WWESEEETRRTQATSPGSSTAET*SVAEAV
Trigger: CACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGGA...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGTGGGCCCGTGGTGCTaGTGGAGCTGGTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRVGPWC*WSWCCL
Trigger: CAAGCAGCACCAGCTCCACAAGCACCACGGGCCCAC...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACGGTTCGTGGATGGAGTaGAGGCCAGGCGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: KAAGPERLVGERGGNAENGSWME*RPGGPL
Trigger: CAAAGGCCCGCCTGGCCTCAACTCCATCCACGAACC...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGATGAGGCTCAGGAATTaGGGGTGCAAGGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RRARNAWWESEEETRRTQMRLRN*GCKARC
Trigger: GCAGCGGGCCTTGCACCCCAAATTCCTGAGCCTCAT...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389201.7
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTTGTTGTGGGACAGGTaGAGCTCCTCCAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRLLWDR*SSSSDL
Trigger: CAAGTCGCTGGAGGAGCTCAACCTGTCCCACAACAA...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCAGCGACATCAGGTTGTaGTGGGACAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRSDIRL*WDRLSS
Trigger: GGAGCTCAACCTGTCCCACAACAACCTGATGTCGCT...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCGGCAGCGACATCAGGTaGTTGTGGGACAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LPSPGIGGGEARIPETPLGSDIR*LWDRLS
Trigger: GCTCAACCTGTCCCACAACAACCTGATGTCGCTGCC...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGTGCCAGGGGTTGTGGTaGAGGTGCACGCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLCQGLW*RCTRSR
Trigger: CCTCGAGCGCGTGCACCTCAACCACAACCCCTGGCA...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCATTGCAATGCCAGGGGTaGTGGTTGAGGTGCACGCGC +
Preference number: 5 (lower is better)
Translates to: AAGPERLVGERGGNAENSLQCQG*WLRCTR
Trigger: GCGCGTGCACCTCAACCACAACCCCTGGCATTGCAA...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCGTGCCCGTGCGGCATTaGAGCTCGGCAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: WWESEEETRRTQATSPGSVPVRH*SSAAMP
Trigger: GGGCATGGCTGCCGAGCTCAAATGCCGCACGGGCAC...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCTCCTGCACGGTGACGTaGGTGAAGTTAAGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LPSPGIGGGEARIPETPLSCTVT*VKLSVP
Trigger: CGGCACGCTTAACTTCACCAACGTCACCGTGCAGGA...GAGCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGAGCTCGTCCTCCACGTaGATGATCTCCACGGTGCGC +
Preference number: 5 (lower is better)
Translates to: RRARNAWWESEEETRRTQSSSST*MISTVR
Trigger: GCGCACCGTGGAGATCATCAACGTGGAGGACGAGCT...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCTTGCACGTTCTCCTaGGAGCCGCTCTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRSCTFS*EPLLKS
Trigger: GCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGA...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CCCTCCCGTCACCGGGGATTGGCGGGGGTGAGGCGAGGATCCCAGAGACTCCGCTCCATCTCTTCAGTTTaGAGGGCGGAGGAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PSRHRGLAGVRRGSQRLRSISSV*RAEEWE
Trigger: CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGA...GCGGAGTCTCTGGGATCCTCGCCTCACCCCCGCCAATCCCCGGTGACGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 90 bp CATGACAGCGGGCGCAGCACGTCGTGTTGCTGGGCACCGTCTCCTTaGGCCACCAGCTCAGCCAGAGCACGTCGCAGTTGCAATGCCAGG +
Preference number: 5 (lower is better)
Translates to: HDSGRSTSCCWAPSP*ATSSARARRSCNAR
Trigger: CCTGGCATTGCAACTGCGACGTGCTCTGGCTGAGCTGGTGGCTCAAGGAGACGGTGCCCAGCAACACGACGTGCTGCGCCCGCTGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CCA 90 bp AGCGACTTGAGGTCGTCGAAGGCGTTGCGCTCGATGGTGGCTACCTaGGCGTGCATGAGCCACAGCTTGCGCAGGCTGGTGAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: SDLRSSKALRSMVAT*ACMSHSLRRLVRPW
Trigger: CCAGGGTCTCACCAGCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCTTCGACGACCTCAAGTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGGCGCCCACCTCGATCTaGCGCACCAGGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLAPTSI*RTRFLL
Trigger: GAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCGC...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACACCGTGGTCAGCCGGTaGTCAAAAAGCTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: KAAGPERLVGERGGNAENTVVSR*SKSSSV
Trigger: CACGCTGGAGCTTTTTGACAACCGGCTGACCACGGT...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAATGTATTCCAGCCGCTaGAGCTCGCCCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRMYSSR*SSPRSR
Trigger: CCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACAT...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGGGATGTCCTTGAGGTaGCACATGCCCAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: RRARNAWWESEEETRRTQGMSLR*HMPRLR
Trigger: CCTCAACCTGGGCATGTGCAACCTCAAGGACATCCC...CTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGTGCATGAGCCACAGCTaGCGCAGGCTGGTGAGACCC +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLCMSHS*RRLVRP
Trigger: GGGTCTCACCAGCCTGCGCAAGCTGTGGCTCATGCA...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGTTGTTGTGGGACAGGTaGAGCTCCTCCAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: WKAAGPERLVGERGGNAELLWDR*SSSSDL
Trigger: CAAGTCGCTGGAGGAGCTCAACCTGTCCCACAACAA...CTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCATGCCCTCGGTGACGTaGAGGTCCGTGGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LVGERGGNAENSGHFSWVMPSVT*RSVGGS
Trigger: GGAGCCGCCCACGGACCTCAACGTCACCGAGGGCAT...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCATCCTTGGAGCCGCTCTaGAAGAGCAGAGGTTCGTGG +
Preference number: 5 (lower is better)
Translates to: AAGPERLVGERGGNAENSSLEPL*KSRGSW
Trigger: CCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGA...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 90 bp TTGAGGTCGTCGAAGGCGTTGCGCTCGATGGTGGCTACCTGGGCGTaGATGAGCCACAGCTTGCGCAGGCTGGTGAGACCCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LRSSKALRSMVATWA*MSHSLRRLVRPWKE
Trigger: CTCCTTCCAGGGTCTCACCAGCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCTTCGACGACCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGACCAGGGCCGTCAGGTaGGGGATGTCCTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLTRAVR*GMSLRL
Trigger: CAACCTCAAGGACATCCCCAACCTGACGGCCCTGGT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGATCAGGTCCAGCCGGTaGCCCGACAGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEIRSSR*PDSSSS
Trigger: GGAGCTGGAGCTGTCGGGCAACCGGCTGGACCTGAT...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCTGCCAGGGGTTGTGGTaGAGGTGCACGCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LVGERGGNAENSGHFSWVCQGLW*RCTRSR
Trigger: CCTCGAGCGCGTGCACCTCAACCACAACCCCTGGCA...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGCAGAGCACGTCGCAGTaGCAATGCCAGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLQSTSQ*QCQGLW
Trigger: CCACAACCCCTGGCATTGCAACTGCGACGTGCTCTG...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGAGCTCGTCCTCCACGTaGATGATCTCCACGGTGCGC +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLSSSST*MISTVR
Trigger: GCGCACCGTGGAGATCATCAACGTGGAGGACGAGCT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGATCCTTGGAGCCGCTCTaGAAGAGCAGAGGTTCGTGG +
Preference number: 5 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRSLEPL*KSRGSW
Trigger: CCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGA...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCATCTTGCACGTTCTCCTaGGAGCCGCTCTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AAGPERLVGERGGNAENSSCTFS*EPLLKS
Trigger: GCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGA...TGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGATCTGCGTCTCTaGCACGTTCTCCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: KAAGPERLVGERGGNAENSDLRL*HVLLGA
Trigger: GGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTGA...GTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAAGCGTTCCGGGCCCGCCGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCAGGTGCCGCAGGTGCTaGAACGTGTCCGTCCGGATC +
Preference number: 5 (lower is better)
Translates to: LVGERGGNAENSGHFSWVRCRRC*NVSVRI
Trigger: GATCCGGACGGACACGTTCAAGCACCTGCGGCACCT...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGTTGCGCACCAGGTTCTaGCTCAGCTGCAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWLRTRF*LSCRIS
Trigger: GGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAA...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGCGCCCACCTCGATCTaGCGCACCAGGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRAPTSI*RTRFLL
Trigger: GAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCGC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGACCGTGGTCAGCCGGTaGTCAAAAAGCTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLTVVSR*SKSSSV
Trigger: CACGCTGGAGCTTTTTGACAACCGGCTGACCACGGT...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGAAAGCTCCTCTCTCCCCTGGAAGGCGGCGGGCCCGGAACGCTTGGTGGGAGAAGCGACATCAGGTTGTaGTGGGACAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RKLLSPLEGGGPGTLGGRSDIRL*WDRLSS
Trigger: GGAGCTCAACCTGTCCCACAACAACCTGATGTCGCT...TCTCCCACCAAGCGTTCCGGGCCCGCCGCCTTCCAGGGGAGAGAGGAGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGTCATGAGGGTGCCGTaGGGCGTCAGCCAGTTGACG +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRVMRVP*GVSQLT
Trigger: CGTCAACTGGCTGACGCCCAACGGCACCCTCATGAC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGTCCACGGCCGAGACGTaGAGCGTGGCCGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGSTAET*SVAEAV
Trigger: CACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGGA...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGGTTCGTGGATGGAGTaGAGGCCAGGCGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRGSWME*RPGGPL
Trigger: CAAAGGCCCGCCTGGCCTCAACTCCATCCACGAACC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGCTGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGTCTTGCACGTTCTCCTaGGAGCCGCTCTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GLEATSPQFPAWSQKVGWSCTFS*EPLLKS
Trigger: GCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGA...CCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 90 bp TTGAAGGCGCCCACCTCGATCTTGCGCACCAGGTTCTTGCTCAGCTaGAGAATCTCCAGGTGCCGCAGGTGCTTGAACGTGTCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: LKAPTSILRTRFLLS*RISRCRRCLNVSVR
Trigger: CCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCGCCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGTTGCGCACCAGGTTCTaGCTCAGCTGCAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLLRTRF*LSCRIS
Trigger: GGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAA...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTAAAAGCTCCAGCGTGTaGAGGCTGGGCAGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRKSSSV*RLGSPL
Trigger: CAACGGGCTGCCCAGCCTCAACACGCTGGAGCTTTT...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGATGTATTCCAGCCGCTaGAGCTCGCCCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEMYSSR*SSPRSR
Trigger: CCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACAT...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTACCAGGGCCGTCAGGTaGGGGATGTCCTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRTRAVR*GMSLRL
Trigger: CAACCTCAAGGACATCCCCAACCTGACGGCCCTGGT...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTAGCTCCTCCAGCGACTaGAGGTCGTCGAAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRSSSSD*RSSKAL
Trigger: CAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGCT...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCAGCTCCTCCAGCGACTaGAGGTCGTCGAAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LVGERGGNAENSGHFSWVSSSSD*RSSKAL
Trigger: CAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGCT...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGTTGTTGTGGGACAGGTaGAGCTCCTCCAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLLLWDR*SSSSDL
Trigger: CAAGTCGCTGGAGGAGCTCAACCTGTCCCACAACAA...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTTGCAATGCCAGGGGTaGTGGTTGAGGTGCACGCGC +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRLQCQG*WLRCTR
Trigger: GCGCGTGCACCTCAACCACAACCCCTGGCATTGCAA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGTTGGGCGTCAGCCAGTaGACGGAGGTCATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GSSGDVSISSVLRAEEWELGVSQ*TEVMEV
Trigger: CACCTCCATGACCTCCGTCAACTGGCTGACGCCCAA...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGAAGCCACCTCTCCCCAATTCCCTGCGTGGTCCCAGAAGGTGGGCTGGGCTGTCCATCTCTTCAGTTTaGAGGGCGGAGGAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: WKPPLPNSLRGPRRWAGLSISSV*RAEEWE
Trigger: CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGA...CAGCCCAGCCCACCTTCTGGGACCACGCAGGGAATTGGGGAGAGGTGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 90 bp CGCACCAGGTTCTTGCTCAGCTGCAGAATCTCCAGGTGCCGCAGGTaGTTGAACGTGTCCGTCCGGATCACCTGGATGCCGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RTRFLLSCRISRCRR*LNVSVRITWMPFSC
Trigger: GCAAGAGAACGGCATCCAGGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS GCA 90 bp TCGATCTTGCGCACCAGGTTCTTGCTCAGCTGCAGAATCTCCAGGTaGCGCAGGTGCTTGAACGTGTCCGTCCGGATCACCTGGATGCCG +
Preference number: 5 (lower is better)
Translates to: SILRTRFLLSCRISR*RRCLNVSVRITWMP
Trigger: CGGCATCCAGGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAAGATCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS GCA 90 bp TTGCCGGCTGAGTTCGTCACCATGCACGTGTACTGGCCCGTGTCCTaGACGGTGACGTTGGTGAAGTTAAGCGTGCCGTCATGCAGGACG +
Preference number: 5 (lower is better)
Translates to: LPAEFVTMHVYWPVS*TVTLVKLSVPSCRT
Trigger: CGTCCTGCATGACGGCACGCTTAACTTCACCAACGTCACCGTGCAGGACACGGGCCAGTACACGTGCATGGTGACGAACTCAGCCGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TTGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTGGATGCCGTTCTCTaGCAGGTTCAGGTACCGCGT +
Preference number: 5 (lower is better)
Translates to: LVGERGGNAENSGHFSWVLDAVL*QVQVPR
Trigger: ACGCGGTACCTGAACCTGCAAGAGAACGGCATCCAG...GACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGCTGGATGCCGTTCTCTaGCAGGTTCAGGTACCGCGT +
Preference number: 5 (lower is better)
Translates to: GSSGDVSISSVLRAEEWELDAVL*QVQVPR
Trigger: ACGCGGTACCTGAACCTGCAAGAGAACGGCATCCAG...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGGGGATGTCCTTGAGGTaGCACATGCCCAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GSSGDVSISSVLRAEEWEGMSLR*HMPRLR
Trigger: CCTCAACCTGGGCATGTGCAACCTCAAGGACATCCC...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTGGCAGCGACATCAGGTaGTTGTGGGACAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRGSDIR*LWDRLS
Trigger: GCTCAACCTGTCCCACAACAACCTGATGTCGCTGCC...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp TGGTGGGAGAGCGAGGAGGAAACGCGGAGAACTCAGGCCACTTCTCCTGGGTCCTCAGATCTGCGTCTCTaGCACGTTCTCCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: WWESEEETRRTQATSPGSSDLRL*HVLLGA
Trigger: GGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTGA...GGACCCAGGAGAAGTGGCCTGAGTTCTCCGCGTTTCCTCCTCGCTCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp AGGGCGGAGGAGTGGGAGGGAGGGACGGGCGTCAAACTGCAAAAACTGAACCGTTTGCGCACCAGGTTCTaGCTCAGCTGCAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: RAEEWEGGTGVKLQKLNRLRTRF*LSCRIS
Trigger: GGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAA...ACGGTTCAGTTTTTGCAGTTTGACGCCCGTCCCTCCCTCCCACTCCTCCGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGGTTCGTGGATGGAGTaGAGGCCAGGCGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGGSWME*RPGGPL
Trigger: CAAAGGCCCGCCTGGCCTCAACTCCATCCACGAACC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GGGAGCTCTGGCGACGTGTCCATCTCTTCAGTTTTGAGGGCGGAGGAGTGGGAGTCCATCTCTTCAGTTTaGAGGGCGGAGGAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GSSGDVSISSVLRAEEWESISSV*RAEEWE
Trigger: CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGA...CTCCCACTCCTCCGCCCTCAAAACTGAAGAGATGGACACGTCGCCAGAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGAGCTCCTCCAGCGACTaGAGGTCGTCGAAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGSSSSD*RSSKAL
Trigger: CAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGCT...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGCAGAGCACGTCGCAGTaGCAATGCCAGGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGQSTSQ*QCQGLW
Trigger: CCACAACCCCTGGCATTGCAACTGCGACGTGCTCTG...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGCGCAGCACGTCGTGTaGCTGGGCACCGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQAQHVV*LGTVSL
Trigger: CAAGGAGACGGTGCCCAGCAACACGACGTGCTGCGC...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGGGATGTCCTTGAGGTaGCACATGCCCAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGGMSLR*HMPRLR
Trigger: CCTCAACCTGGGCATGTGCAACCTCAAGGACATCCC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGGGCAGCGACATCAGGTaGTTGTGGGACAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGGSDIR*LWDRLS
Trigger: GCTCAACCTGTCCCACAACAACCTGATGTCGCTGCC...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGATGAGGCTCAGGAATTaGGGGTGCAAGGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQMRLRN*GCKARC
Trigger: GCAGCGGGCCTTGCACCCCAAATTCCTGAGCCTCAT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389201.7
ENST00000652263.1
CDS-3UTR CAA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGATGTATTCCAGCCGCTaGAGCTCGCCCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQMYSSR*SSPRSR
Trigger: CCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACAT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGACCAGGGCCGTCAGGTaGGGGATGTCCTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGTRAVR*GMSLRL
Trigger: CAACCTCAAGGACATCCCCAACCTGACGGCCCTGGT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGTTGGGCGTCAGCCAGTaGACGGAGGTCATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGLGVSQ*TEVMEV
Trigger: CACCTCCATGACCTCCGTCAACTGGCTGACGCCCAA...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGAGCTCGTCCTCCACGTaGATGATCTCCACGGTGCGC +
Preference number: 5 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGSSSST*MISTVR
Trigger: GCGCACCGTGGAGATCATCAACGTGGAGGACGAGCT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGGTGGGGTCAGATCTGCGTCTCTaGCACGTTCTCCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: VVDANLPSVSKVSVGQVGSDLRL*HVLLGA
Trigger: GGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTGA...CCCCACCTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp CAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGCAGACCGTGGTCAGCCGGTaGTCAAAAAGCTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: QVVVDANLPSVSKVSVGQTVVSR*SKSSSV
Trigger: CACGCTGGAGCTTTTTGACAACCGGCTGACCACGGT...CTGCCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGTCCTGCACGGTGACGTaGGTGAAGTTAAGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGSCTVT*VKLSVP
Trigger: CGGCACGCTTAACTTCACCAACGTCACCGTGCAGGA...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS-3UTR CAA 90 bp GAGCAGGTAGTCGTTGACGCAAACCTCCCTTCAGTATCAAAAGTGTCTGTGGGGAGCGACATCAGGTTGTaGTGGGACAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EQVVVDANLPSVSKVSVGSDIRL*WDRLSS
Trigger: GGAGCTCAACCTGTCCCACAACAACCTGATGTCGCT...CCCCACAGACACTTTTGATACTGAAGGGAGGTTTGCGTCAACGACTACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 90 bp CCGCTGCCGGTGCCCCCGGCCGCCACGGGGTCCACGGCCGAGACGTaGAGCGTGGCCGAGGCGGTGGTGTTGCCGGCTGAGTTCGTCACC +
Preference number: 6 (lower is better)
Translates to: PLPVPPAATGSTAET*SVAEAVVLPAEFVT
Trigger: GGTGACGAACTCAGCCGGCAACACCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGGACCCCGTGGCGGCCGGGGGCACCGGCAGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 72 bp GTGCCCCCGGCCGCCACGGGGTCCACGGCCGAGACGTaGAGCGTGGCCGAGGCGGTGGTGTTGCCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VPPAATGSTAET*SVAEAVVLPAE
Trigger: CTCAGCCGGCAACACCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGGACCCCGTGGCGGCCGGGGGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 72 bp TGCCCCCGGCCGCCACGGGGTCCACGGCCGAGACGTTaGGCGTGGCCGAGGCGGTGGTGTTGCCGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: CPRPPRGPRPRR*AWPRRWCCRLS
Trigger: ACTCAGCCGGCAACACCACCGCCTCGGCCACGCTCAACGTCTCGGCCGTGGACCCCGTGGCGGCCGGGGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 72 bp GTGGGCCCTGGCGGTTCCTTCTCCGTCCCCCGCGGCTaGAGGGCCTCCTCTCCGGGCTGCGTCTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: VGPGGSFSVPRG*RASSPGCVSRV
Trigger: GACCCTGGAGACGCAGCCCGGAGAGGAGGCCCTGCAGCCGCGGGGGACGGAGAAGGAACCGCCAGGGCCCAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CCA 72 bp TTGAGGTGGTCTCGCTCCAGGGCGGGCAGGGCCAGGTaGCTGTCCCCGCCCACACCACCCCCACTGGCCACG +
Preference number: 6 (lower is better)
Translates to: LRWSRSRAGRAR*LSPPTPPPLAT
Trigger: CGTGGCCAGTGGGGGTGGTGTGGGCGGGGACAGCCACCTGGCCCTGCCCGCCCTGGAGCGAGACCACCTCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 90 bp GCGGCCACGGACACGGCCGAGGCGGCGGGCAGCTCGTCCTCCACGTaGATGATCTCCACGGTGCGCGTGGGCCCGTGGTGCTTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: AATDTAEAAGSSSST*MISTVRVGPWCLWS
Trigger: GCTCCACAAGCACCACGGGCCCACGCGCACCGTGGAGATCATCAACGTGGAGGACGAGCTGCCCGCCGCCTCGGCCGTGTCCGTGGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 72 bp AGCCAAAGGGCTGGCCCAAAGCGCAGGGCCTGGATTTaGGGCCGGGGGACCCCGCAGGGCCTGTGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SQRAGPKRRAWI*GRGTPQGLWEP
Trigger: GGGCTCCCACAGGCCCTGCGGGGTCCCCCGGCCTCAAATCCAGGCCCTGCGCTTTGGGCCAGCCCTTTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599957.5
CDS CAA 72 bp GACACGGCCGAGGCGGCGGGCAGCTCGTCCTCCACGTaGATGATCTCCACGGTGCGCGTGGGCCCGTGGTGC +
Preference number: 6 (lower is better)
Translates to: DTAEAAGSSSST*MISTVRVGPWC
Trigger: GCACCACGGGCCCACGCGCACCGTGGAGATCATCAACGTGGAGGACGAGCTGCCCGCCGCCTCGGCCGTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 72 bp CCTCGAAGGCCGCCTCCGAGATGTATTCCAGCCGCTTaGGCTCGCCCAGGTCCAGGCGCCGCAGCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PRRPPPRCIPAA*ARPGPGAAARA
Trigger: TGCCCTCGCTGCGGCGCCTGGACCTGGGCGAGCTCAAGCGGCTGGAATACATCTCGGAGGCGGCCTTCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS TCA 72 bp AATGCGACTGGTCCAGCTCCCCAATGTAGCGCCCCTTaGGGCCGGCGGGCGCATGACAGCGGGCGCAGCACG +
Preference number: 6 (lower is better)
Translates to: NATGPAPQCSAP*GRRAHDSGRST
Trigger: CGTGCTGCGCCCGCTGTCATGCGCCCGCCGGCCTCAAGGGGCGCTACATTGGGGAGCTGGACCAGTCGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 72 bp CGGCATTTGAGCTCGGCAGCCATGCCCTCGGTGACGTaGAGGTCCGTGGGCGGCTCCACGATGACGGGCGCA +
Preference number: 6 (lower is better)
Translates to: RHLSSAAMPSVT*RSVGGSTMTGA
Trigger: TGCGCCCGTCATCGTGGAGCCGCCCACGGACCTCAACGTCACCGAGGGCATGGCTGCCGAGCTCAAATGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 72 bp GGGCGCAGCACGTCGTGTTGCTGGGCACCGTCTCCTTaGGCCACCAGCTCAGCCAGAGCACGTCGCAGTTGC +
Preference number: 6 (lower is better)
Translates to: GRSTSCCWAPSP*ATSSARARRSC
Trigger: GCAACTGCGACGTGCTCTGGCTGAGCTGGTGGCTCAAGGAGACGGTGCCCAGCAACACGACGTGCTGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS TCA 72 bp CGGGCTGCGTCTCCAGGGTCTCCACGGTCACCGTGGTaGAGTAGGTGTAGCCGCCACTGCCCCCTCCAACAC +
Preference number: 6 (lower is better)
Translates to: RAASPGSPRSPW*SRCSRHCPLQH
Trigger: GTGTTGGAGGGGGCAGTGGCGGCTACACCTACTTCACCACGGTGACCGTGGAGACCCTGGAGACGCAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 72 bp TCGAAGGCGTTGCGCTCGATGGTGGCTACCTGGGCGTaGATGAGCCACAGCTTGCGCAGGCTGGTGAGACCC +
Preference number: 6 (lower is better)
Translates to: SKALRSMVATWA*MSHSLRRLVRP
Trigger: GGGTCTCACCAGCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCTTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 72 bp ACGTCGCAGTTGCAATGCCAGGGGTTGTGGTTGAGGTaGACGCGCTCGAGGCGGTGCAGGGGCGTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: TSQLQCQGLWLR*TRSRRCRGVKR
Trigger: CCTCTTCACGCCCCTGCACCGCCTCGAGCGCGTGCACCTCAACCACAACCCCTGGCATTGCAACTGCGACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CCA 72 bp AGGTCGTCGAAGGCGTTGCGCTCGATGGTGGCTACCTaGGCGTGCATGAGCCACAGCTTGCGCAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RSSKALRSMVAT*ACMSHSLRRLV
Trigger: CACCAGCCTGCGCAAGCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCTTCGACGACCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 72 bp CAGTTGACGGAGGTCATGGAGGTGCCCGTGCGGCATTaGAGCTCGGCAGCCATGCCCTCGGTGACGTTGAGG +
Preference number: 6 (lower is better)
Translates to: QLTEVMEVPVRH*SSAAMPSVTLR
Trigger: CCTCAACGTCACCGAGGGCATGGCTGCCGAGCTCAAATGCCGCACGGGCACCTCCATGACCTCCGTCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 90 bp CGCCCGGCCCCGCCGCCTCAGATCTGCGTCTCTTGCACGTTCTCCTaGGAGCCGCTCTTGAAGAGCAGAGGTTCGTGGATGGAGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RPAPPPQICVSCTFS*EPLLKSRGSWMELR
Trigger: CCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTGAGGCGGCGGGGCCGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 90 bp TGGGACAGGTTGAGCTCCTCCAGCGACTTGAGGTCGTCGAAGGCGTaGCGCTCGATGGTGGCTACCTGGGCGTGCATGAGCCACAGCTTG +
Preference number: 6 (lower is better)
Translates to: WDRLSSSSDLRSSKA*RSMVATWACMSHSL
Trigger: CAAGCTGTGGCTCATGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGCTCAACCTGTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CCA 72 bp TTCTCCTTGGAGCCGCTCTTGAAGAGCAGAGGTTCGTaGATGGAGTTGAGGCCAGGCGGGCCTTTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: FSLEPLLKSRGS*MELRPGGPLPP
Trigger: CGGGGGCAAAGGCCCGCCTGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 72 bp TTGAGCTCCTCCAGCGACTTGAGGTCGTCGAAGGCGTaGCGCTCGATGGTGGCTACCTGGGCGTGCATGAGC +
Preference number: 6 (lower is better)
Translates to: LSSSSDLRSSKA*RSMVATWACMS
Trigger: GCTCATGCACGCCCAGGTAGCCACCATCGAGCGCAACGCCTTCGACGACCTCAAGTCGCTGGAGGAGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 90 bp CCGCCTCAGATCTGCGTCTCTTGCACGTTCTCCTTGGAGCCGCTCTaGAAGAGCAGAGGTTCGTGGATGGAGTTGAGGCCAGGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: PPQICVSCTFSLEPL*KSRGSWMELRPGGP
Trigger: AGGCCCGCCTGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTGAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS GCA 72 bp CGCACCAGGTTCTTGCTCAGCTGCAGAATCTCCAGGTaGCGCAGGTGCTTGAACGTGTCCGTCCGGATCACC +
Preference number: 6 (lower is better)
Translates to: RTRFLLSCRISR*RRCLNVSVRIT
Trigger: GGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS CAA 72 bp TTGAAGGCGCCCACCTCGATCTTGCGCACCAGGTTCTaGCTCAGCTGCAGAATCTCCAGGTGCCGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: LKAPTSILRTRF*LSCRISRCRRC
Trigger: GCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAAGATCGAGGTGGGCGCCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS TCA 72 bp TGCTCAGCTGCAGAATCTCCAGGTGCCGCAGGTGCTTaGACGTGTCCGTCCGGATCACCTGGATGCCGTTCT +
Preference number: 6 (lower is better)
Translates to: CSAAESPGAAGA*TCPSGSPGCRS
Trigger: AGAACGGCATCCAGGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS GCA 72 bp TTCTTGCTCAGCTGCAGAATCTCCAGGTGCCGCAGGTaGTTGAACGTGTCCGTCCGGATCACCTGGATGCCG +
Preference number: 6 (lower is better)
Translates to: FLLSCRISRCRR*LNVSVRITWMP
Trigger: CGGCATCCAGGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS GCA 72 bp CCCACCTCGATCTTGCGCACCAGGTTCTTGCTCAGCTaGAGAATCTCCAGGTGCCGCAGGTGCTTGAACGTG +
Preference number: 6 (lower is better)
Translates to: PTSILRTRFLLS*RISRCRRCLNV
Trigger: CACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGTGCGCAAGATCGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS CAA 72 bp TTGCTCAGCTGCAGAATCTCCAGGTGCCGCAGGTGCTaGAACGTGTCCGTCCGGATCACCTGGATGCCGTTC +
Preference number: 6 (lower is better)
Translates to: LLSCRISRCRRC*NVSVRITWMPF
Trigger: GAACGGCATCCAGGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS CAA 72 bp ATGCACGTGTACTGGCCCGTGTCCTGCACGGTGACGTaGGTGAAGTTAAGCGTGCCGTCATGCAGGACGGAG +
Preference number: 6 (lower is better)
Translates to: MHVYWPVSCTVT*VKLSVPSCRTE
Trigger: CTCCGTCCTGCATGACGGCACGCTTAACTTCACCAACGTCACCGTGCAGGACACGGGCCAGTACACGTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 72 bp CCGCCGCCTCAGATCTGCGTCTCTTGCACGTTCTCCTaGGAGCCGCTCTTGAAGAGCAGAGGTTCGTGGATG +
Preference number: 6 (lower is better)
Translates to: PPPQICVSCTFS*EPLLKSRGSWM
Trigger: CATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGAGACGCAGATCTGAGGCGGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 90 bp ACCAGGTTCTTGCTCAGCTGCAGAATCTCCAGGTGCCGCAGGTGCTaGAACGTGTCCGTCCGGATCACCTGGATGCCGTTCTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: TRFLLSCRISRCRRC*NVSVRITWMPFSCR
Trigger: CCTGCAAGAGAACGGCATCCAGGTGATCCGGACGGACACGTTCAAGCACCTGCGGCACCTGGAGATTCTGCAGCTGAGCAAGAACCTGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000600381.1
ENST00000652263.1
CDS GCA 72 bp GAGTTCGTCACCATGCACGTGTACTGGCCCGTGTCCTaGACGGTGACGTTGGTGAAGTTAAGCGTGCCGTCA +
Preference number: 6 (lower is better)
Translates to: EFVTMHVYWPVS*TVTLVKLSVPS
Trigger: TGACGGCACGCTTAACTTCACCAACGTCACCGTGCAGGACACGGGCCAGTACACGTGCATGGTGACGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1
CDS CAA 72 bp ATCTGCGTCTCTTGCACGTTCTCCTTGGAGCCGCTCTaGAAGAGCAGAGGTTCGTGGATGGAGTTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: ICVSCTFSLEPL*KSRGSWMELRP
Trigger: TGGCCTCAACTCCATCCACGAACCTCTGCTCTTCAAGAGCGGCTCCAAGGAGAACGTGCAAGAGACGCAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389201.7
ENST00000599957.5
ENST00000652263.1