RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC47 (Homo sapiens)

Ensembl gene IDs: ENSG00000130764

Ensembl transcript IDs: ENST00000378251.3, ENST00000462356.5, ENST00000479239.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTGGCCCCGCTaGGCCAGGGTGAGGTGCTGCCACTGCCTTCAGCCTACAGGCTGC +
Preference number: 1 (lower is better)
Translates to: TMETPPMPLSSAWPR*ARVRCCHCLQPTGC
Trigger: GCAGCCTGTAGGCTGAAGGCAGTGGCAGCACCTCACCCTGGCTCAGCGGGGCCAAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp GAGTGTGTGGGCCTCGTCCTGTCTGGAGTCCCCTCCCTCCCACAGTaGGCGAGACGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCA +
Preference number: 1 (lower is better)
Translates to: ECVGLVLSGVPSLPQ*ARREGLAVTRQVGP
Trigger: TGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCGTCTCGCCCACTGTGGGAGGGAGGGGACTCCAGACAGGACGAGGCCCACACACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp AGCAGAGGCGTCTGGTCCACTCCTGGGGCTCCACCTGCCTGTCACTaGAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTC +
Preference number: 1 (lower is better)
Translates to: SRGVWSTPGAPPACH*STSVHTMETPPMPL
Trigger: GAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCCAGGAGTGGACCAGACGCCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp ATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATaGAGAGAAAGGGCAGCCTCTGCCATGGCAGCCCCAAATCACCTC +
Preference number: 1 (lower is better)
Translates to: IPPFLPSSFPGWAGP*RERAASAMAAPNHL
Trigger: GAGGTGATTTGGGGCTGCCATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp TGGGTCCAGGTCTCAAGGCAGCCTGGCCCATGTCCTGCAAGGCTCTaGAGAGCCACCCAGCTGTTAGTCTGCCCACTGCACAGGGCCCCG +
Preference number: 1 (lower is better)
Translates to: WVQVSRQPGPCPARL*RATQLLVCPLHRAP
Trigger: CGGGGCCCTGTGCAGTGGGCAGACTAACAGCTGGGTGGCTCTTCAGAGCCTTGCAGGACATGGGCCAGGCTGCCTTGAGACCTGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp AGGCAAGGCAGTCATCTGACACACCCACGGCAGTCCAGCTGGCACTaGGTGTGTGGGCCTCGTCCTGTCTGGAGTCCCCTCCCTCCCACA +
Preference number: 1 (lower is better)
Translates to: RQGSHLTHPRQSSWH*VCGPRPVWSPLPPT
Trigger: TGTGGGAGGGAGGGGACTCCAGACAGGACGAGGCCCACACACTCAGTGCCAGCTGGACTGCCGTGGGTGTGTCAGATGACTGCCTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp ATGCTTCCCAAGCAGAGGCGTCTGGTCCACTCCTGGGGCTCCACCTaGCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACC +
Preference number: 1 (lower is better)
Translates to: MLPKQRRLVHSWGST*LSLQHQRAHDGNPT
Trigger: GGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCCAGGAGTGGACCAGACGCCTCTGCTTGGGAAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp CAGCTTTTGCTACCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATaGTTCCCAAGCAGAGGCGTCTGGTCCACTCCTGGGGCTCCACCT +
Preference number: 1 (lower is better)
Translates to: QLLLPSVPRLAEDCR*FPSRGVWSTPGAPP
Trigger: AGGTGGAGCCCCAGGAGTGGACCAGACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp GCCTCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTaGCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGAGGACA +
Preference number: 1 (lower is better)
Translates to: ASSLQQGRPLANCGI*LDCPEQQESGFGRT
Trigger: TGTCCTCCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp AAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTaGCTGCCCAGAGCAGCAGGAATCAGGTTTTGGGAGGACACAAGG +
Preference number: 1 (lower is better)
Translates to: KPPAGQAPGQLWHLP*LPRAAGIRFWEDTR
Trigger: CCTTGTGTCCTCCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp ATCCTCCAGCTTTTGCTACCATCTGTCCCTCGGCTGGCTGAGGACTaGCGATGCTTCCCAAGCAGAGGCGTCTGGTCCACTCCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: ILQLLLPSVPRLAED*RCFPSRGVWSTPGA
Trigger: AGCCCCAGGAGTGGACCAGACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAGCTGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp CAGGGTGAGGTGCTGCCACTGCCTTCAGCCTACAGGCTGCTTGCCTaGAGGGGTCTCCACATCTCCACCCCCACAAAGCAATCCAACAGC +
Preference number: 1 (lower is better)
Translates to: QGEVLPLPSAYRLLA*RGLHISTPTKQSNS
Trigger: GCTGTTGGATTGCTTTGTGGGGGTGGAGATGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTGAAGGCAGTGGCAGCACCTCACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp CCTAAGCATCCTCCAGCTTTTGCTACCATCTGTCCCTCGGCTGGCTaGGGACTGCCGATGCTTCCCAAGCAGAGGCGTCTGGTCCACTCC +
Preference number: 1 (lower is better)
Translates to: PKHPPAFATICPSAG*GLPMLPKQRRLVHS
Trigger: GGAGTGGACCAGACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAGCTGGAGGATGCTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp GCAGTGGGGTCTGTAAAATCATCGCGGTGGCTGGCCGTGTCCTCATaGGCCAAGCACACTGACTCCCGGGAGTGGTGTGCACGCACATGT +
Preference number: 1 (lower is better)
Translates to: AVGSVKSSRWLAVSS*AKHTDSREWCARTC
Trigger: ACATGTGCGTGCACACCACTCCCGGGAGTCAGTGTGCTTGGCTCATGAGGACACGGCCAGCCACCGCGATGATTTTACAGACCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp CAGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTaGCACACCCACGGCAGTCCAGCTGGCACTGAGTGTGTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: QQESGFGRTQGKAVI*HTHGSPAGTECVGL
Trigger: GAGGCCCACACACTCAGTGCCAGCTGGACTGCCGTGGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp AAGCACACTGACTCCCGGGAGTGGTGTGCACGCACATGTGGTGCCTaGACATACACGAAGACACATGGACGTGGGGGTCTGACCTGGACA +
Preference number: 1 (lower is better)
Translates to: KHTDSREWCARTCGA*TYTKTHGRGGLTWT
Trigger: TGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCGTGCACACCACTCCCGGGAGTCAGTGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp GGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTaGACATTCACAACGGAAACGTCTACAACAGAAGGCGCCCAGGAC +
Preference number: 1 (lower is better)
Translates to: GAWTYTKTHGRGGLT*TFTTETSTTEGAQD
Trigger: GTCCTGGGCGCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp CATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTaGCCTGGACATTCACAACGGAAACGTCTACAACAGAAGGCGCCC +
Preference number: 1 (lower is better)
Translates to: HVVPGHTRRHMDVGV*PGHSQRKRLQQKAP
Trigger: GGGCGCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp GTGGTGTGCACGCACATGTGGTGCCTGGACATACACGAAGACACATaGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTAC +
Preference number: 1 (lower is better)
Translates to: VVCTHMWCLDIHEDT*TWGSDLDIHNGNVY
Trigger: GTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCGTGCACACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp AGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGTaGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCA +
Preference number: 1 (lower is better)
Translates to: SISRITSCIRKGHSM*QPHPHPRSDRCVTA
Trigger: TGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp TGCACGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTaGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGA +
Preference number: 1 (lower is better)
Translates to: CTHMWCLDIHEDTWT*GSDLDIHNGNVYNR
Trigger: TCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp GTGCTGCGAGTTAAATACATTTCCAGCATCTCACGCATCACAAGCTaGATCAGGAAAGGGCACAGCATGTGGCAGCCTCATCCACACCCA +
Preference number: 1 (lower is better)
Translates to: VLRVKYISSISRITS*IRKGHSMWQPHPHP
Trigger: TGGGTGTGGATGAGGCTGCCACATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTATTTAACTCGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 90 bp AAGATTATGATCACTGCCAGCTGGAGAACCCAACGCCCTTGCACATaGCAAGCTGCATCCTGGCATGATATGGTTTTACAAGATGCTGCG +
Preference number: 1 (lower is better)
Translates to: KIMITASWRTQRPCT*QAASWHDMVLQDAA
Trigger: CGCAGCATCTTGTAAAACCATATCATGCCAGGATGCAGCTTGGCATGTGCAAGGGCGTTGGGTTCTCCAGCTGGCAGTGATCATAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 90 bp CATCCTGGCATGATATGGTTTTACAAGATGCTGCGTCATAGAAAGTaGCCGTGCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGT +
Preference number: 1 (lower is better)
Translates to: HPGMIWFYKMLRHRK*PCRSRKRTSVGFPS
Trigger: ACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGCACGGTCACTTTCTATGACGCAGCATCTTGTAAAACCATATCATGCCAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp ACAACGGAAACGTCTACAACAGAAGGCGCCCAGGACCCACCTTTCTaGCGCATAAATGAAGATTTTTGGCTCAAAAACCTAAGCATCCTC +
Preference number: 1 (lower is better)
Translates to: TTETSTTEGAQDPPF*RINEDFWLKNLSIL
Trigger: GAGGATGCTTAGGTTTTTGAGCCAAAAATCTTCATTTATGCGCCAGAAAGGTGGGTCCTGGGCGCCTTCTGTTGTAGACGTTTCCGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp AACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCACATaGCACCCAGATCGTAAGGCAGTGGGGTCTGTAAAATCATCGCGG +
Preference number: 1 (lower is better)
Translates to: NKWCHSIKLMSLLLT*HPDRKAVGSVKSSR
Trigger: CCGCGATGATTTTACAGACCCCACTGCCTTACGATCTGGGTGCCATGTGAGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 90 bp AGAAGTCGTTTTCTTAACCTTTGTCTTCTCACTGTTGGTTATTGGTaGGAAGGAAATCACATCACCGTCTGCATCCACAAGACACGGGTA +
Preference number: 1 (lower is better)
Translates to: RSRFLNLCLLTVGYW*EGNHITVCIHKTRV
Trigger: TACCCGTGTCTTGTGGATGCAGACGGTGATGTGATTTCCTTCCCACCAATAACCAACAGTGAGAAGACAAAGGTTAAGAAAACGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
3UTR CCA 90 bp ATCAGAAGTCGTTTTCTTAACCTTTGTCTTCTCACTGTTGGTTATTaGTGGGAAGGAAATCACATCACCGTCTGCATCCACAAGACACGG +
Preference number: 1 (lower is better)
Translates to: IRSRFLNLCLLTVGY*WEGNHITVCIHKTR
Trigger: CCGTGTCTTGTGGATGCAGACGGTGATGTGATTTCCTTCCCACCAATAACCAACAGTGAGAAGACAAAGGTTAAGAAAACGACTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
3UTR TCA 90 bp TCCCAAAATCACCAGTCATTTCTACAGACACAGAAATCGAGACACTaGACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTG +
Preference number: 1 (lower is better)
Translates to: SQNHQSFLQTQKSRH*TENKWCHSIKLMSL
Trigger: CAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGTCTCGATTTCTGTGTCTGTAGAAATGACTGGTGATTTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CAA 90 bp CAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTaGGCCCCGCTGAGCCAGGGTGAGGTGCTGCCACTGCCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: QRAHDGNPTDAALLR*APLSQGEVLPLPSA
Trigger: GGCTGAAGGCAGTGGCAGCACCTCACCCTGGCTCAGCGGGGCCAAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAGGGAAGGCCTGGCGGTaGCCAGACAAGTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRGKAWR*PDKWVQ
Trigger: CTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCC...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGACAGTCCAGCTGGCACTaGGTGTGTGGGCCTCGTCCT +
Preference number: 2 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRQSSWH*VCGPRP
Trigger: AGGACGAGGCCCACACACTCAGTGCCAGCTGGACTG...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGACGTCTGGTCCACTCCTaGGGCTCCACCTGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRRLVHS*GSTCLS
Trigger: TGACAGGCAGGTGGAGCCCCAGGAGTGGACCAGACG...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCCAGCGTGCACACGATaGAAACCCCACCGATGCCGC +
Preference number: 2 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWPACTR*KPHRCR
Trigger: GCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCTCGAGATCACGCCACTaGACTCCAGCCTGGCGACAG +
Preference number: 2 (lower is better)
Translates to: SSLQQGRPLANCGICLDCSRSRH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGCGTGATCTCGA...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCAGACACAGGCTGCAGTaGCTCGAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: SSLQQGRPLANCGICLDCRHRLQ*LEITPL
Trigger: CAGTGGCGTGATCTCGAGTCACTGCAGCCTGTGTCT...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp GACCTGGACATTCACAACGGAAACGTCTACAACAGAAGGCGCCCAGGACCCACCCCCGCTGAGCCAGGGTaGGGTGCTGCCACTGCCTTC +
Preference number: 2 (lower is better)
Translates to: DLDIHNGNVYNRRRPGPTPAEPG*GAATAF
Trigger: GAAGGCAGTGGCAGCACCTCACCCTGGCTCAGCGGG...GGTGGGTCCTGGGCGCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAATCCGCTTGGCCCCGCTaGGCCAGGGTGAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQSAWPR*ARVRCC
Trigger: GCAGCACCTCACCCTGGCTCAGCGGGGCCAAGCGGA...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCCTTCAGCCTACAGGCTaGTTGCCTGAAGGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVLQPTG*LPEGVS
Trigger: GGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTGAAG...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAAAGCAGAGTCCTGGCCTaGGGAAGCCCCCGTGCCGCC +
Preference number: 2 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQSRVLA*GSPRAA
Trigger: GGCGGCACGGGGGCTTCCCCAGGCCAGGACTCTGCT...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CAA 90 bp CAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTaGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGAGGACACAAG +
Preference number: 2 (lower is better)
Translates to: QASSRAGPWPTVASA*TAQSSRNQVLGGHK
Trigger: CTTGTGTCCTCCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCGTAATCCCAGCACTTTaGGGGGCAGAGGTGGACAGA +
Preference number: 2 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVVIPAL*GAEVDR
Trigger: TCTGTCCACCTCTGCCCCTCAAAGTGCTGGGATTAC...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGTGTCCCTCGGCTGGCTaGGGACTGCCGATGCTTCCC +
Preference number: 2 (lower is better)
Translates to: ANCGICLDCPEQQESGFGCPSAG*GLPMLP
Trigger: GGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACA...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCAGCCTACAGGCTGCTTaGCTGAAGGGGTCTCCACAT +
Preference number: 2 (lower is better)
Translates to: SSLQQGRPLANCGICLDCSLQAA*LKGSPH
Trigger: ATGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCT...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAGAAACGCACATCGGTTaGCTTCCCAAGTTTTCGGGT +
Preference number: 2 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRETHIG*LPKFSG
Trigger: ACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTC...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATATACACGAAGACACATaGACGTGGGGGTCTGACCTG +
Preference number: 2 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHIHEDT*TWGSDL
Trigger: CAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTAT...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGCCCCGGGAGCCAAGATaGCAGCTCCAGCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWPREPR*QLQHPS
Trigger: GGAGGGATGCTGGAGCTGCCATCTTGGCTCCCGGGG...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCGGATAATTCAGCATTaGCGCATAGAAACCTCCGCA +
Preference number: 2 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWRIIQH*RIETSA
Trigger: TGCGGAGGTTTCTATGCGGCAATGCTGAATTATCCG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGGCTGAGGACTGCCGATaGTTCCCAAGCAGAGGCGTC +
Preference number: 2 (lower is better)
Translates to: ANCGICLDCPEQQESGFGAEDCR*FPSRGV
Trigger: GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGC...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGCTCCCGGGAGTGGTGTaGACGCACATGTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWLPGVV*THMWCL
Trigger: CAGGCACCACATGTGCGTGCACACCACTCCCGGGAG...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCTTTGAGGGGCAGAGGTaGACAGATCATGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: SSLQQGRPLANCGICLDCFEGQR*TDHEVK
Trigger: CTTGACCTCATGATCTGTCCACCTCTGCCCCTCAAA...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGTACAGGCTGCTTGCCTaGAGGGGTCTCCACATCTCC +
Preference number: 2 (lower is better)
Translates to: ANCGICLDCPEQQESGFGYRLLA*RGLHIS
Trigger: GGAGATGTGGAGACCCCTTCAGGCAAGCAGCCTGTA...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCAATCCAACAGCAGTATaGAGAGACGCAATTCTGCCA +
Preference number: 2 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVNPTAV*RDAILP
Trigger: TGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATT...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAACCGGGCCTCTCAGGTTaGCAACTAAAGGTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQPGLSG*QLKVCG
Trigger: CCCACACACCTTTAGTTGTCAACCTGAGAGGCCCGG...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGTGTCCTGCAAGGCTCTaGAGAGCCACCCAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: ANCGICLDCPEQQESGFGCPARL*RATQLL
Trigger: TAACAGCTGGGTGGCTCTTCAGAGCCTTGCAGGACA...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGGCCAACTGTGGCATCTaGCTTGACTGCCCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWANCGI*LDCPEQ
Trigger: CTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp TGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTGGACATCCCAGCAGCATGACTaGACATCACTCACTTCCCCT +
Preference number: 2 (lower is better)
Translates to: CGAWTYTKTHGRGGLTWTSQQHD*TSLTSP
Trigger: AGGGGAAGTGAGTGATGTTCAGTCATGCTGCTGGGA...TGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp GTGCTTAGCCGCTGCTGTGTGATCACAGAGTCTTTACACAAGCCTCGATGGTGCCCAGGAGACACAGGCTaGAGTGACTCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: VLSRCCVITESLHKPRWCPGDTG*SDSRSR
Trigger: GCGTGATCTCGAGTCACTGCAGCCTGTGTCTCCTGG...GCACCATCGAGGCTTGTGTAAAGACTCTGTGATCACACAGCAGCGGCTAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAACAACGCCCTTGCACATaGCAAGCTGCATCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQQRPCT*QAASWH
Trigger: ATGCCAGGATGCAGCTTGGCATGTGCAAGGGCGTTG...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp GACCTGGACATTCACAACGGAAACGTCTACAACAGAAGGCGCCCAGGACCCACCCCAGACGCTGTTACGTaGCACATGACTGTACAGTGC +
Preference number: 2 (lower is better)
Translates to: DLDIHNGNVYNRRRPGPTPDAVT*HMTVQC
Trigger: GCACTGTACAGTCATGTGCCACGTAACAGCGTCTGG...GGTGGGTCCTGGGCGCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp TACATTTCCAGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGCATCTGTCCCTCGGCTaGCTGAGGACTGCCGATGCT +
Preference number: 2 (lower is better)
Translates to: YISSISRITSCIRKGHSMHLSLG*LRTADA
Trigger: AGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATG...CATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGGAGGTGGACAGATCATaGGGTCAAGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWEVDRS*GQEIKT
Trigger: GGTCTTGATCTCTTGACCTCATGATCTGTCCACCTC...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCTGGAAACCCCACCGATaGCGCTCTCCTCCGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GVKKTSETPVLRVKYISSWKPHR*RSPPLG
Trigger: GCCAAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCA...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACCACATGACTGTACAGTaGCACGTAACAGCACTGTAC +
Preference number: 2 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNHMTVQ*HVTALY
Trigger: GTACAGTGCTGTTACGTGGCACTGTACAGTCATGTG...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CAA 90 bp GGGCCTCTCAGGTTGACAACTAAAGGTGTGTGGGCTGTGGGGCTCTaGCAGATGCTTCCCAAAATCACCAGTCATTTCTACAGACACAGA +
Preference number: 2 (lower is better)
Translates to: GPLRLTTKGVWAVGL*QMLPKITSHFYRHR
Trigger: TCTGTGTCTGTAGAAATGACTGGTGATTTTGGGAAGCATCTGCAAGAGCCCCACAGCCCACACACCTTTAGTTGTCAACCTGAGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp TACATTTCCAGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGGAAGACACATGGACGTaGGGGTCTGACCTGGACATT +
Preference number: 2 (lower is better)
Translates to: YISSISRITSCIRKGHSMEDTWT*GSDLDI
Trigger: AATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTC...CATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGTTATGTGTTTTCATCTaGAAAACCAAGTGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWLCVFI*KTKCPS
Trigger: GCTGGGACACTTGGTTTTCCAGATGAAAACACATAA...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CAA 90 bp ATAAATGAAGATTTTTGGCTCAAAAACCTAAGCATCCTCCAGCTTTaGCTACCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTC +
Preference number: 2 (lower is better)
Translates to: INEDFWLKNLSILQL*LPSVPRLAEDCRCF
Trigger: GAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAGCTGGAGGATGCTTAGGTTTTTGAGCCAAAAATCTTCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAAGGTTTTACAAGATGCTaGGTCATAGAAAGTGACCGT +
Preference number: 2 (lower is better)
Translates to: HGRGGLTWTFTTETSTTEGFTRC*VIESDR
Trigger: ACGGTCACTTTCTATGACGCAGCATCTTGTAAAACC...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR GCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTACTGCAGCACCAGCGTaGACACGATGGAAACCCCAC +
Preference number: 2 (lower is better)
Translates to: TLNREQMVSFDKADESASTAAPA*TRWKPH
Trigger: GTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGT...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCGTGGGGGTCTGACCTaGACATTCACAACGGAAACG +
Preference number: 2 (lower is better)
Translates to: TLNREQMVSFDKADESASRGGLT*TFTTET
Trigger: CGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACG...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCTGCGTCATAGAAAGTaGCCGTGCCGTTCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: TLNREQMVSFDKADESASLRHRK*PCRSRK
Trigger: TTTCCTTGAACGGCACGGTCACTTTCTATGACGCAG...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR TCA 90 bp CAATCCAACAGCAGTATGAAGAGACGCAATTCTGCCAATTCTAAGGTCACATTAAGCTGCATCCTGGCATaGTATGGTTTTACAAGATGC +
Preference number: 2 (lower is better)
Translates to: QSNSSMKRRNSANSKVTLSCILA*YGFTRC
Trigger: GCATCTTGTAAAACCATATCATGCCAGGATGCAGCT...TAATGTGACCTTAGAATTGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CCA 90 bp CATGACATCCTTGCAAATCTGCAGACTGGTGGCACTTGTTACTTCCAAAAACAACTCACTGTTGGTTATTaGTGGGAAGGAAATCACATC +
Preference number: 2 (lower is better)
Translates to: HDILANLQTGGTCYFQKQLTVGY*WEGNHI
Trigger: GATGTGATTTCCTTCCCACCAATAACCAACAGTGAG...TTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGCAGATTTGCAAGGATGTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479239.1
3UTR-3UTR GCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTTATGGTTTTACAAGATaGTGCGTCATAGAAAGTGAC +
Preference number: 2 (lower is better)
Translates to: TLNREQMVSFDKADESASYGFTR*CVIESD
Trigger: GTCACTTTCTATGACGCAGCATCTTGTAAAACCATA...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp TGCCGCTCTCCTCCGCTTGGCCCCGCTGAGCCAGGGTaGGGTGCTGCCACTGCCTTCAGCCTACAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: CRSPPLGPAEPG*GAATAFSLQAA
Trigger: AGCAGCCTGTAGGCTGAAGGCAGTGGCAGCACCTCACCCTGGCTCAGCGGGGCCAAGCGGAGGAGAGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp GGCCTCGTCCTGTCTGGAGTCCCCTCCCTCCCACAGTaGGCGAGACGGGAAGGCCTGGCGGTGACCAGACAA +
Preference number: 3 (lower is better)
Translates to: GLVLSGVPSLPQ*ARREGLAVTRQ
Trigger: TTGTCTGGTCACCGCCAGGCCTTCCCGTCTCGCCCACTGTGGGAGGGAGGGGACTCCAGACAGGACGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp AGCATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTaGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: SIPPFLPSSFPG*AGPCRERAASA
Trigger: GGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp GACACACCCACGGCAGTCCAGCTGGCACTGAGTGTGTaGGCCTCGTCCTGTCTGGAGTCCCCTCCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: DTPTAVQLALSV*ASSCLESPPSH
Trigger: GTGGGAGGGAGGGGACTCCAGACAGGACGAGGCCCACACACTCAGTGCCAGCTGGACTGCCGTGGGTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp CTGGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTaGACACGATGGAAACCCCACCGATGCCGCTCTCCT +
Preference number: 3 (lower is better)
Translates to: LGLHLPVTAAPA*TRWKPHRCRSP
Trigger: AGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp CACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATaGAAACCCCACCGATGCCGCTCTCCTCCGCTTGGC +
Preference number: 3 (lower is better)
Translates to: HLPVTAAPACTR*KPHRCRSPPLG
Trigger: GCCAAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp CCGATGCTTCCCAAGCAGAGGCGTCTGGTCCACTCCTaGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGT +
Preference number: 3 (lower is better)
Translates to: PMLPKQRRLVHS*GSTCLSLQHQR
Trigger: ACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCCAGGAGTGGACCAGACGCCTCTGCTTGGGAAGCATCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp AAGCAGAGGCGTCTGGTCCACTCCTGGGGCTCCACCTaGCTGTCACTGCAGCACCAGCGTGCACACGATGGA +
Preference number: 3 (lower is better)
Translates to: KQRRLVHSWGST*LSLQHQRAHDG
Trigger: TCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCCAGGAGTGGACCAGACGCCTCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp CTACCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATaGTTCCCAAGCAGAGGCGTCTGGTCCACTCCTGGG +
Preference number: 3 (lower is better)
Translates to: LPSVPRLAEDCR*FPSRGVWSTPG
Trigger: CCCAGGAGTGGACCAGACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CAA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGCAGCCTACAGGCTGCTaGCCTGAAGGGGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: APPACHCSTSVHTMETPPQPTGC*PEGVST
Trigger: TGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTG...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CAA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAAGCCGCTCTCCTCCGCTaGGCCCCGCTGAGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQAALLR*APLSQG
Trigger: ACCCTGGCTCAGCGGGGCCAAGCGGAGGAGAGCGGC...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp AGTCATCTGACACACCCACGGCAGTCCAGCTGGCACTaGGTGTGTGGGCCTCGTCCTGTCTGGAGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: SHLTHPRQSSWH*VCGPRPVWSPL
Trigger: GAGGGGACTCCAGACAGGACGAGGCCCACACACTCAGTGCCAGCTGGACTGCCGTGGGTGTGTCAGATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp AGGGTGAGGTGCTGCCACTGCCTTCAGCCTACAGGCTaGTTGCCTGAAGGGGTCTCCACATCTCCACCCCCA +
Preference number: 3 (lower is better)
Translates to: RVRCCHCLQPTG*LPEGVSTSPPP
Trigger: TGGGGGTGGAGATGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTGAAGGCAGTGGCAGCACCTCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp GGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATaGCAGCCCCAAATCACCTCTCAGAGCAACTGTCTG +
Preference number: 3 (lower is better)
Translates to: GPGHAEKGQPLP*QPQITSQSNCL
Trigger: CAGACAGTTGCTCTGAGAGGTGATTTGGGGCTGCCATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp CCTCCAGCTTTTGCTACCATCTGTCCCTCGGCTGGCTaGGGACTGCCGATGCTTCCCAAGCAGAGGCGTCTG +
Preference number: 3 (lower is better)
Translates to: PPAFATICPSAG*GLPMLPKQRRL
Trigger: CAGACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp GTCTCAAGGCAGCCTGGCCCATGTCCTGCAAGGCTCTaGAGAGCCACCCAGCTGTTAGTCTGCCCACTGCAC +
Preference number: 3 (lower is better)
Translates to: VSRQPGPCPARL*RATQLLVCPLH
Trigger: GTGCAGTGGGCAGACTAACAGCTGGGTGGCTCTTCAGAGCCTTGCAGGACATGGGCCAGGCTGCCTTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp GACTCCCGGGAGTGGTGTGCACGCACATGTGGTGCCTaGACATACACGAAGACACATGGACGTGGGGGTCTG +
Preference number: 3 (lower is better)
Translates to: DSREWCARTCGA*TYTKTHGRGGL
Trigger: CAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCGTGCACACCACTCCCGGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp GTGCTGCCACTGCCTTCAGCCTACAGGCTGCTTGCCTaGAGGGGTCTCCACATCTCCACCCCCACAAAGCAA +
Preference number: 3 (lower is better)
Translates to: VLPLPSAYRLLA*RGLHISTPTKQ
Trigger: TTGCTTTGTGGGGGTGGAGATGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTGAAGGCAGTGGCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp CTTTTGCTACCATCTGTCCCTCGGCTGGCTGAGGACTaGCGATGCTTCCCAAGCAGAGGCGTCTGGTCCACT +
Preference number: 3 (lower is better)
Translates to: LLLPSVPRLAED*RCFPSRGVWST
Trigger: AGTGGACCAGACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CAA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCAACGGATAATTCAGCATaGCCGCATAGAAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: GAPPACHCSTSVHTMETPTDNSA*PHRNLR
Trigger: GCGGAGGTTTCTATGCGGCAATGCTGAATTATCCGT...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CAA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCGAGAACCCAACGCCCTaGCACATGCCAAGCTGCATC +
Preference number: 3 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTENPTP*HMPSCI
Trigger: GATGCAGCTTGGCATGTGCAAGGGCGTTGGGTTCTC...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp TCTGTAAAATCATCGCGGTGGCTGGCCGTGTCCTCATaGGCCAAGCACACTGACTCCCGGGAGTGGTGTGCA +
Preference number: 3 (lower is better)
Translates to: SVKSSRWLAVSS*AKHTDSREWCA
Trigger: TGCACACCACTCCCGGGAGTCAGTGTGCTTGGCTCATGAGGACACGGCCAGCCACCGCGATGATTTTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp CATCCACACCCACGCAGTGACAGATGTGTTACAGCATaGACACCAAGTCCCCGGGAGCCAAGATGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: HPHPRSDRCVTA*TPSPREPRWQL
Trigger: GAGCTGCCATCTTGGCTCCCGGGGACTTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp TCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTaGCACACCCACGGCAGTCCAGCTGGCACTGAGTGT +
Preference number: 3 (lower is better)
Translates to: SGFGRTQGKAVI*HTHGSPAGTEC
Trigger: ACACTCAGTGCCAGCTGGACTGCCGTGGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp ACGCACATGTGGTGCCTGGACATACACGAAGACACATaGACGTGGGGGTCTGACCTGGACATTCACAACGGA +
Preference number: 3 (lower is better)
Translates to: THMWCLDIHEDT*TWGSDLDIHNG
Trigger: TCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp AAAGTGACCGTGCCGTTCAAGGAAACGCACATCGGTTaGCTTCCCAAGTTTTCGGGTCTCCGAACCAGTGAC +
Preference number: 3 (lower is better)
Translates to: KVTVPFKETHIG*LPKFSGLRTSD
Trigger: GTCACTGGTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGCACGGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp ATGTGGTGCCTGGACATACACGAAGACACATGGACGTaGGGGTCTGACCTGGACATTCACAACGGAAACGTC +
Preference number: 3 (lower is better)
Translates to: MWCLDIHEDTWT*GSDLDIHNGNV
Trigger: GACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp CCTGGACATACACGAAGACACATGGACGTGGGGGTCTaGCCTGGACATTCACAACGGAAACGTCTACAACAG +
Preference number: 3 (lower is better)
Translates to: PGHTRRHMDVGV*PGHSQRKRLQQ
Trigger: CTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp CGCTCAGTGACACATGAGAAACGTGTGCTTAGCCGCTaGTGTGTGATCACAGAGTCTTTACACAAGCCTCGA +
Preference number: 3 (lower is better)
Translates to: RSVTHEKRVLSR*CVITESLHKPR
Trigger: TCGAGGCTTGTGTAAAGACTCTGTGATCACACAGCAGCGGCTAAGCACACGTTTCTCATGTGTCACTGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp ATCACTGCCAGCTGGAGAACCCAACGCCCTTGCACATaGCAAGCTGCATCCTGGCATGATATGGTTTTACAA +
Preference number: 3 (lower is better)
Translates to: ITASWRTQRPCT*QAASWHDMVLQ
Trigger: TTGTAAAACCATATCATGCCAGGATGCAGCTTGGCATGTGCAAGGGCGTTGGGTTCTCCAGCTGGCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR GCA 72 bp ATTATGATCACTGCCAGCTGGAGAACCCAACGCCCTTaGACATGCCAAGCTGCATCCTGGCATGATATGGTT +
Preference number: 3 (lower is better)
Translates to: IMITASWRTQRP*TCQAASWHDMV
Trigger: AACCATATCATGCCAGGATGCAGCTTGGCATGTGCAAGGGCGTTGGGTTCTCCAGCTGGCAGTGATCATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp ACATACACGAAGACACATGGACGTGGGGGTCTGACCTaGACATTCACAACGGAAACGTCTACAACAGAAGGC +
Preference number: 3 (lower is better)
Translates to: TYTKTHGRGGLT*TFTTETSTTEG
Trigger: GCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CAA 90 bp CAATCCAACAGCAGTATGAAGAGACGCAATTCTGCCAATTCTAAGGTCACATTAGGAAACGCACATCGGTaGGCTTCCCAAGTTTTCGGG +
Preference number: 3 (lower is better)
Translates to: QSNSSMKRRNSANSKVTLGNAHR*ASQVFG
Trigger: CCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCC...TAATGTGACCTTAGAATTGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR-3UTR CAA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTAGCATCCTCCAGCTTTaGCTACCATCTGTCCCTCGG +
Preference number: 3 (lower is better)
Translates to: TLNREQMVSFDKADESASSILQL*LPSVPR
Trigger: CCGAGGGACAGATGGTAGCAAAAGCTGGAGGATGCT...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR TCA 72 bp ATGATATGGTTTTACAAGATGCTGCGTCATAGAAAGTaGCCGTGCCGTTCAAGGAAACGCACATCGGTTGGC +
Preference number: 3 (lower is better)
Translates to: MIWFYKMLRHRK*PCRSRKRTSVG
Trigger: GCCAACCGATGTGCGTTTCCTTGAACGGCACGGTCACTTTCTATGACGCAGCATCTTGTAAAACCATATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp TGTCATTCGATAAAGCTGATGAGTCTGCTTCTCACATaGCACCCAGATCGTAAGGCAGTGGGGTCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: CHSIKLMSLLLT*HPDRKAVGSVK
Trigger: TTTTACAGACCCCACTGCCTTACGATCTGGGTGCCATGTGAGAAGCAGACTCATCAGCTTTATCGAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CCA 72 bp TTTCTTAACCTTTGTCTTCTCACTGTTGGTTATTGGTaGGAAGGAAATCACATCACCGTCTGCATCCACAAG +
Preference number: 3 (lower is better)
Translates to: FLNLCLLTVGYW*EGNHITVCIHK
Trigger: CTTGTGGATGCAGACGGTGATGTGATTTCCTTCCCACCAATAACCAACAGTGAGAAGACAAAGGTTAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
3UTR TCA 72 bp CACCAGTCATTTCTACAGACACAGAAATCGAGACACTaGACAGAGAACAAATGGTGTCATTCGATAAAGCTG +
Preference number: 3 (lower is better)
Translates to: HQSFLQTQKSRH*TENKWCHSIKL
Trigger: CAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGTCTCGATTTCTGTGTCTGTAGAAATGACTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCCTCGGCACGGCCCTTaGCCTTCCCGCCACCACGGC +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWPRHGP*PSRHHG
Trigger: GCCGTGGTGGCGGGAAGGGCAAGGGCCGTGCCGAGG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCGCAGCACGAGGCTGTaGAGCTGCGGCAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWRSTRL*SCGRPC
Trigger: GCAGGGCCTGCCGCAGCTGCACAGCCTCGTGCTGCG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCACGAGGCTGTGCAGCTaGGGCAGGCCCTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVTRLCS*GRPCAR
Trigger: CCTGGCGCAGGGCCTGCCGCAGCTGCACAGCCTCGT...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCTGGGGAAGCCCCCGTaGCGCCTCAAGCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWLGKPP*RLKPPA
Trigger: TGCTGGAGGCTTGAGGCGGCACGGGGGCTTCCCCAG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACGTGGGGAGGGGCAGTaGCCAGGTCGGCCTTGGACG +
Preference number: 4 (lower is better)
Translates to: GAPPACHCSTSVHTMETPRGEGQ*PGRPWT
Trigger: CGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACG...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGGCGGACAGGCGGCCCTaGCGTCAGCGCACGACAGTC +
Preference number: 4 (lower is better)
Translates to: APPACHCSTSVHTMETPPADRRP*RQRTTV
Trigger: GACTGTCGTGCGCTGACGCCAGGGCCGCCTGTCCGC...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CAA 72 bp CACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTaGGCCCCGCTGAGCCAGGGTGAGGTGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: HDGNPTDAALLR*APLSQGEVLPL
Trigger: CAGTGGCAGCACCTCACCCTGGCTCAGCGGGGCCAAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTCTCCGGCCAAGACTCTaGCACCGCTGCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLLRPRL*HRCRRH
Trigger: ATGGCGGCGGCAGCGGTGTCAGAGTCTTGGCCGGAG...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTCCCTCCCTCCCACAGTaGGCGAGACGGGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLPSLPQ*ARREGL
Trigger: CAGGCCTTCCCGTCTCGCCCACTGTGGGAGGGAGGG...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGCCAAGGGGACAATCTTaGGGTCCTGTGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: APPACHCSTSVHTMETPPPRGQS*GPVGAG
Trigger: CCCGGCCCCCACAGGACCTCAAGATTGTCCCCTTGG...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAGGCAAGGCAGTCATCTaGCACACCCACGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRGKAVI*HTHGSP
Trigger: TGGACTGCCGTGGGTGTGTCAGATGACTGCCTTGCC...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCGTCTGGTCCACTCCTaGGGCTCCACCTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWRLVHS*GSTCLS
Trigger: TGACAGGCAGGTGGAGCCCCAGGAGTGGACCAGACG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCCCCCGGGAGCCAAGATaGCAGCTCCAGCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVPREPR*QLQHPS
Trigger: GGAGGGATGCTGGAGCTGCCATCTTGGCTCCCGGGG...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGCAGCCGCCAGTTCACTaGGCAGGGGCAGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ANCGICLDCPEQQESGFGQPPVH*AGAARR
Trigger: CCGGCGCGCTGCCCCTGCTCAGTGAACTGGCGGCTG...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCGGGCGATGTCGGGGCTaGGTTCTCGGAGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCGRCRG*VLGGSC
Trigger: ACAACTGCCTCCGAGAACTCAGCCCCGACATCGCCC...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATATGAGCCAAGCACACTaGCTCCCGGGAGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHMSQAH*LPGVVC
Trigger: GCACACCACTCCCGGGAGTCAGTGTGCTTGGCTCAT...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATGCAGGTACTCCAGGATaGATCTGGTCTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHAGTPG*IWSGSR
Trigger: GCGGCTGCCAGACCAGATCCATCCTGGAGTACCTGC...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCAGCAGAGTCCTGGCCTaGGGAAGCCCCCGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTSRVLA*GSPRAA
Trigger: GGCGGCACGGGGGCTTCCCCAGGCCAGGACTCTGCT...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATTACAGGCTGCTTGCCTaGAGGGGTCTCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHYRLLA*RGLHIS
Trigger: GGAGATGTGGAGACCCCTTCAGGCAAGCAGCCTGTA...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCCTGGCCGTGTCCTCATaGGCCAAGCACACTGACTCC +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVLAVSS*AKHTDS
Trigger: GGAGTCAGTGTGCTTGGCTCATGAGGACACGGCCAG...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCATCGAGATCACGCCACTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: GAPPACHCSTSVHTMETPSRSRH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGCGTGATCTCGA...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCAGCTGAGGACTGCCGATaGTTCCCAAGCAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GAPPACHCSTSVHTMETPAEDCR*FPSRGV
Trigger: GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGC...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCGCCTGGCCCATGTCCTaGAAGGCTCTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVAWPMS*KALKSH
Trigger: GTGGCTCTTCAGAGCCTTGCAGGACATGGGCCAGGC...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATGCCAACTGTGGCATCTaGCTTGACTGCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHANCGI*LDCPEQ
Trigger: CTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAGGATGGATCTGGTCTaGCAGCCGCTGACCATCTTC +
Preference number: 4 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRRMDLV*QPLTIF
Trigger: GAAGATGGTCAGCGGCTGCCAGACCAGATCCATCCT...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCAATCTTGAGGTCCTGTaGGGGCCGGGCGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCNLEVL*GPGAVQ
Trigger: CTGTACTGCGCCCGGCCCCCACAGGACCTCAAGATT...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATACTGACTCCCGGGAGTaGTGTGCACGCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHTDSRE*CARTCG
Trigger: ACCACATGTGCGTGCACACCACTCCCGGGAGTCAGT...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCGGTCTCAAGGCAGCCTaGCCCATGTCCTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCGLKAA*PMSCKA
Trigger: AGCCTTGCAGGACATGGGCCAGGCTGCCTTGAGACC...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACTGGCACTGAGTGTGTaGGCCTCGTCCTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAPPACHCSTSVHTMETPLALSV*ASSCLE
Trigger: CTCCAGACAGGACGAGGCCCACACACTCAGTGCCAG...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTCCGGGCCTCTCAGGTTaGCAACTAAAGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLPGLSG*QLKVCG
Trigger: CCCACACACCTTTAGTTGTCAACCTGAGAGGCCCGG...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCTTCTTCTGCTTCCTCTaGTCCTCGGCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCFFCFL*SSASSC
Trigger: GCAGCTGGAGGCCGAGGAGCAGAGGAAGCAGAAGAA...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGAGGCCCGACACACTCTaGCGCTTCTTCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: APPACHCSTSVHTMETPPRPDTL*RFFCFL
Trigger: GAGGAAGCAGAAGAAGCGGCAGAGTGTGTCGGGCCT...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGAGAAAGGGCAGCCTCTaGCATGGCAGCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWRKGSL*HGSPKS
Trigger: TGATTTGGGGCTGCCATGGCAGAGGCTGCCCTTTCT...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGATCACAGAGATCTTCGTaGAGCTTGGTCTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRSQRSS*SLVCEV
Trigger: CACCTCGCAGACCAAGCTCCACGAAGATCTCTGTGA...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGACGGCACGGAGCTCGTaGGTGGCAAGGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ANCGICLDCPEQQESGFGTARSS*VARVAA
Trigger: GGCTGCCACCCTTGCCACCCACGAGCTCCGTGCCGT...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATAAAGGGCACAGCATGTaGCAGCCTCATCCACACCCA +
Preference number: 4 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHKGHSM*QPHPHP
Trigger: TGGGTGTGGATGAGGCTGCCACATGCTGTGCCCTTT...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTGGTCTGGCAGCCGCTaGCCATCTTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTWSGSR*PSSPGA
Trigger: AGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCA...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGTTTCCATCCAGCAAGTaGAGGTATCTGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWFPSSK*RYLCRP
Trigger: GGGCCTGCACAGATACCTTCACTTGCTGGATGGAAA...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCGCGCCTCCAGCGCGTTaGCCGACAGGTCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPAPPAR*PTGRAP
Trigger: GGGTGCTCGACCTGTCGGGCAACGCGCTGGAGGCGC...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGCTGGCTGCAGGTCCATaGCTCGCACCACGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWLAAGP*LAPRPP
Trigger: TGGGGGCCGTGGTGCGAGGCATGGACCTGCAGCCAG...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGGCCTCCAGCTGCAGCTaGCGCACCAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWASSCS*RTSSLA
Trigger: GGCCAAGGAGCTGGTGCGGCAGCTGCAGCTGGAGGC...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTAGAACCCAACGCCCTTaGACATGCCAAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLRTQRP*TCQAAS
Trigger: GGATGCAGCTTGGCATGTGCAAGGGCGTTGGGTTCT...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCGCATCCTCCAGCTTTTaGTACCATCTGTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCASSSF*YHLSLG
Trigger: GCCGAGGGACAGATGGTAGCAAAAGCTGGAGGATGC...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGCACGGAGCTCGTGGGTaGCAAGGGTGGCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWHGARG*QGWQPS
Trigger: GGACGGCTGCCACCCTTGCCACCCACGAGCTCCGTG...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCCCAGCGTGCACACGATaGAAACCCCACCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTPACTR*KPHRCR
Trigger: GCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGG...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378251.3
3UTR CAA 72 bp AGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTaGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SRAGPWPTVASA*TAQSSRNQVLG
Trigger: TCCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGTGTCCCTCGGCTGGCTaGGGACTGCCGATGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWCPSAG*GLPMLP
Trigger: GGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACA...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGGGGAAGGCCTGGCGGTaGCCAGACAAGTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWGKAWR*PDKWVQ
Trigger: CTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCC...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAATCACATCACCGTCTaGATCCACAAGACACGGGTA +
Preference number: 4 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRNHITV*IHKTRV
Trigger: TACCCGTGTCTTGTGGATGCAGACGGTGATGTGATT...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTTGCACGCACATGTGGTaGCTGGACATACACGAAGAC +
Preference number: 4 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLCTHMW*LDIHED
Trigger: GTCTTCGTGTATGTCCAGGCACCACATGTGCGTGCA...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCATCACGCATCACAAGCTaGATCAGGAAAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GAPPACHCSTSVHTMETPSRITS*IRKGHS
Trigger: GCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGA...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGTTGAGCGAGGCCAGGTaGGCGATGTCGGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ANCGICLDCPEQQESGFGLSEAR*AMSGLS
Trigger: ACTCAGCCCCGACATCGCCCACCTGGCCTCGCTCAA...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCCGTCCTTTCCAGCACTaGGATTCGTTGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVRPFQH*DSLWDL
Trigger: CAGATCCCACAACGAATCCCAGTGCTGGAAAGGACG...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCCATCTGTCCCTCGGCTaGCTGAGGACTGCCGATGCT +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTHLSLG*LRTADA
Trigger: AGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATG...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGAGATGTGTTACAGCATaGACACCAAGTCCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: APPACHCSTSVHTMETPPRCVTA*TPSPRE
Trigger: CTCCCGGGGACTTGGTGTCCATGCTGTAACACATCT...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCAGAGGTGGACAGATCATaGGGTCAAGAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: GAPPACHCSTSVHTMETPEVDRS*GQEIKT
Trigger: GGTCTTGATCTCTTGACCTCATGATCTGTCCACCTC...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp TACATTTCCAGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGGTGAGGTTGAGGCTCTaGAGGCGCGGGGCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: YISSISRITSCIRKGHSMVRLRL*RRGAQR
Trigger: GCGCTGCGCCCCGCGCCTGCAGAGCCTCAACCTCAC...CATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGTCCACCACCCGGACCTaGTCCACCACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWSTTRT*STTRRE
Trigger: CTCCCTTCTGGTGGTGGAGCAGGTCCGGGTGGTGGA...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCCTTCAGCCTACAGGCTaGTTGCCTGAAGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTLQPTG*LPEGVS
Trigger: GGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTGAAG...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACTGGAAACCCCACCGATaGCGCTCTCCTCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNWKPHR*RSPPLG
Trigger: GCCAAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCA...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCACTGCAGCACCAGCGTaGACACGATGGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTTAAPA*TRWKPH
Trigger: GTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGT...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCTGGGGCTCTTGCAGATaGTTCCCAAAATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVWGSCR*FPKSPV
Trigger: GACTGGTGATTTTGGGAAGCATCTGCAAGAGCCCCA...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCGAAACGCACATCGGTTaGCTTCCCAAGTTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCETHIG*LPKFSG
Trigger: ACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTC...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCAGTCTGCTTCTCACATaGCACCCAGATCGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVSLLLT*HPDRKA
Trigger: TGCCTTACGATCTGGGTGCCATGTGAGAAGCAGACT...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp TACATTTCCAGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGCCCGCTGAGCCAGGGTaGGGTGCTGCCACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: YISSISRITSCIRKGHSMPAEPG*GAATAF
Trigger: GAAGGCAGTGGCAGCACCTCACCCTGGCTCAGCGGG...CATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGATGGACGTGGGGGTCTaGCCTGGACATTCACAACGG +
Preference number: 4 (lower is better)
Translates to: ANCGICLDCPEQQESGFGMDVGV*PGHSQR
Trigger: CCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCAT...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCAAGCTGCATCCTGGCATGATATGGTTTTACAAGATGCTGCGTCATAGAAAGCGGGCCCCAGCGCGTTaGGCCGCAGCACGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AKLHPGMIWFYKMLRHRKRAPAR*AAARGC
Trigger: ACAGCCTCGTGCTGCGGCGCAACGCGCTGGGGCCCG...CTTTCTATGACGCAGCATCTTGTAAAACCATATCATGCCAGGATGCAGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACAGTGCATTCCCTGGCTaGAGGTCCATGCCTCGCACC +
Preference number: 4 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNSAFPG*RSMPRT
Trigger: GGTGCGAGGCATGGACCTGCAGCCAGGGAATGCACT...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCCTCCCGGGAGTGGTGTaGACGCACATGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPLPGVV*THMWCL
Trigger: CAGGCACCACATGTGCGTGCACACCACTCCCGGGAG...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAAAGCAGGGCAGGCCCCTaGCCAACTGTGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTESRAGP*PTVASA
Trigger: GGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCT...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACCTCAGAGCAACTGTCTaGGGTCCCCAGCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNLRATV*GPQPQN
Trigger: GTTCTGGGGCTGGGGACCCCAGACAGTTGCTCTGAG...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGGGGCAGCCTCTGCCATaGCAGCCCCAAATCACCTCT +
Preference number: 4 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWGQPLP*QPQITS
Trigger: AGAGGTGATTTGGGGCTGCCATGGCAGAGGCTGCCC...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCTCCGCTTGGCCCCGCTaGGCCAGGGTGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSSAWPR*ARVRCC
Trigger: GCAGCACCTCACCCTGGCTCAGCGGGGCCAAGCGGA...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGCAGAAATCGAGACACTaGACAGAGAACAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWQKSRH*TENKWC
Trigger: ACACCATTTGTTCTCTGTTCAGTGTCTCGATTTCTG...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTCCACACCCACGCAGTaGCAGATGTGTTACAGCATG +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTSTPTQ*QMCYSM
Trigger: CATGCTGTAACACATCTGTCACTGCGTGGGTGTGGA...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCGCAGTCCGCAAGCTCTaGAGGGATCTCGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPAVRKL*RDLAQL
Trigger: CAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGC...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp TGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTGGACACAACGCCCTTGCACATaGCAAGCTGCATCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CGAWTYTKTHGRGGLTWTQRPCT*QAASWH
Trigger: ATGCCAGGATGCAGCTTGGCATGTGCAAGGGCGTTG...TGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGGGCATCTGCCTTGACTaGCCAGAGCAGCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: ANCGICLDCPEQQESGFGGICLD*PEQQES
Trigger: TGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCC...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GTGCTTAGCCGCTGCTGTGTGATCACAGAGTCTTTACACAAGCCTCGATGGTGCTGGCCAGGTCGGCCTTaGACGGGTACACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: VLSRCCVITESLHKPRWCWPGRP*TGTPPS
Trigger: TGAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCA...GCACCATCGAGGCTTGTGTAAAGACTCTGTGATCACACAGCAGCGGCTAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GCCAAGCTGCATCCTGGCATGATATGGTTTTACAAGATGCTGCGTCATAGAAAGACAGCAGGGGCCCTTTaGCGGCACGGAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: AKLHPGMIWFYKMLRHRKTAGAL*RHGARG
Trigger: CCCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGT...CTTTCTATGACGCAGCATCTTGTAAAACCATATCATGCCAGGATGCAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCAAGCTGCATCCTGGCATGATATGGTTTTACAAGATGCTGCGTCATAGAAAGTTGAGGCTCTGCAGCTaGGGAAGGCCCGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: AKLHPGMIWFYKMLRHRKLRLCS*GRPGGS
Trigger: CGAGCCGCCGGGCCTTCCGCAGCTGCAGAGCCTCAA...CTTTCTATGACGCAGCATCTTGTAAAACCATATCATGCCAGGATGCAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACGGGATCTCGCTCAGCTaGTTGTTCGAGAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNGISLS*LFERSN
Trigger: GTTGGACCTCTCGAACAACCAGCTGAGCGAGATCCC...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGACTGTTGGTTATTGGTaGGAAGGAAATCACATCACC +
Preference number: 4 (lower is better)
Translates to: APPACHCSTSVHTMETPPTVGYW*EGNHIT
Trigger: GGTGATGTGATTTCCTTCCCACCAATAACCAACAGT...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGCTCACTGTTGGTTATTaGTGGGAAGGAAATCACATC +
Preference number: 4 (lower is better)
Translates to: APPACHCSTSVHTMETPPLTVGY*WEGNHI
Trigger: GATGTGATTTCCTTCCCACCAATAACCAACAGTGAG...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGGGAAGGCCTGGCGGTGACCAGACAAGTGGGTCCAGGTCTCAAGGCAGCCTGGTTGTCTTCTCACTGTTaGTTATTGGTGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: REGLAVTRQVGPGLKAAWLSSHC*LLVGRK
Trigger: TTTCCTTCCCACCAATAACCAACAGTGAGAAGACAA...CCAGGCTGCCTTGAGACCTGGACCCACTTGTCTGGTCACCGCCAGGCCTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCCACTGGGATTCGTTGTaGGATCTGGAAGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTHWDSL*DLEVVQ
Trigger: CTGGACAACTTCCAGATCCCACAACGAATCCCAGTG...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACATGATCACTGCCAGCTaGAGAACCCAACGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNMITAS*RTQRPC
Trigger: GCAAGGGCGTTGGGTTCTCCAGCTGGCAGTGATCAT...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GTGCTTAGCCGCTGCTGTGTGATCACAGAGTCTTTACACAAGCCTCGATGGTGCGTAATCCCAGCACTTTaGGGGGCAGAGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: VLSRCCVITESLHKPRWCVIPAL*GAEVDR
Trigger: TCTGTCCACCTCTGCCCCTCAAAGTGCTGGGATTAC...GCACCATCGAGGCTTGTGTAAAGACTCTGTGATCACACAGCAGCGGCTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAACCAGGAGACACAGGCTaGAGTGACTCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTEPGDTG*SDSRSR
Trigger: GCGTGATCTCGAGTCACTGCAGCCTGTGTCTCCTGG...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp TACATTTCCAGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGCGGCTGGCTGAGGACTaGCGATGCTTCCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: YISSISRITSCIRKGHSMRLAED*RCFPSR
Trigger: TCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCG...CATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCAAATCTGCAGACTGGTaGCACTTGTTACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSLQQGRPLANCGICLDCKSADW*HLLLPK
Trigger: TTTTGGAAGTAACAAGTGCCACCAGTCTGCAGATTT...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GACCTGGACATTCACAACGGAAACGTCTACAACAGAAGGCGCCCAGGACCCACCTTTGAGGGGCAGAGGTaGACAGATCATGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: DLDIHNGNVYNRRRPGPTFEGQR*TDHEVK
Trigger: CTTGACCTCATGATCTGTCCACCTCTGCCCCTCAAA...GGTGGGTCCTGGGCGCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCCGTGGGGGTCTGACCTaGACATTCACAACGGAAACG +
Preference number: 4 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPRGGLT*TFTTET
Trigger: CGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACG...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAAAATCATCGCGGTGGCTaGCCGTGTCCTCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTENHRGG*PCPHEP
Trigger: TGGCTCATGAGGACACGGCCAGCCACCGCGATGATT...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCCCTCGGGGCTCACTCTaGCTGTCAGAGGTACGGGGT +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSPRGSL*LSEVRG
Trigger: ACCCCGTACCTCTGACAGTCAGAGTGAGCCCCGAGG...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AACGACAACATAGCATCACTTTACGACAGAATCATCTGGAAAAACAGAACAACGCCGCTGCCGCCGCCATaGCGCCTCAGCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NDNIASLYDRIIWKNRTTPLPPP*RLSCWQ
Trigger: CTGCCAGCAGCTGAGGCGCCATGGCGGCGGCAGCGG...CGTTGTTCTGTTTTTCCAGATGATTCTGTCGTAAAGTGATGCTATGTTGTCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GACCTGGACATTCACAACGGAAACGTCTACAACAGAAGGCGCCCAGGACCCACCATTCGTTGTGGGATCTaGAAGTTGTCCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: DLDIHNGNVYNRRRPGPTIRCGI*KLSRDC
Trigger: GCAGTCTCTGGACAACTTCCAGATCCCACAACGAAT...GGTGGGTCCTGGGCGCCTTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCCCAGACGCTGTTACGTaGCACATGACTGTACAGTGC +
Preference number: 4 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPPDAVT*HMTVQC
Trigger: GCACTGTACAGTCATGTGCCACGTAACAGCGTCTGG...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAATCCCAGCAGCATGACTaGACATCACTCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTESQQHD*TSLTSP
Trigger: AGGGGAAGTGAGTGATGTTCAGTCATGCTGCTGGGA...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACCGGATAATTCAGCATTaGCGCATAGAAACCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNRIIQH*RIETSA
Trigger: TGCGGAGGTTTCTATGCGGCAATGCTGAATTATCCG...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCGGTTTTACAAGATGCTaGGTCATAGAAAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTGFTRC*VIESDR
Trigger: ACGGTCACTTTCTATGACGCAGCATCTTGTAAAACC...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCCCAGCTCCTTGGCCTTaGCTTCTTTCCGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSPAPWP*LLSAPR
Trigger: CCTTGGGGCGGAAAGAAGCCAAGGCCAAGGAGCTGG...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCGCACGACAGTCACGTaGGGAGGGGCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLNREQMVSFDKADESASRTTVT*GGAVAR
Trigger: CCTGGCCACTGCCCCTCCCCACGTGACTGTCGTGCG...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCCAGGACCCACCTTTCTaGCGCATAAATGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTQDPPF*RINEDF
Trigger: AAAATCTTCATTTATGCGCCAGAAAGGTGGGTCCTG...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAAGAAGACACATGGACGTaGGGGTCTGACCTGGACATT +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTEEDTWT*GSDLDI
Trigger: AATGTCCAGGTCAGACCCCCACGTCCATGTGTCTTC...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp AACGACAACATAGCATCACTTTACGACAGAATCATCTGGAAAAACAGAACAACGAGACGTGCAGGACCCTaGGCAGCAGCCGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: NDNIASLYDRIIWKNRTTRRAGP*AAAGRH
Trigger: ATGCCGGCCGGCTGCTGCTCAGGGTCCTGCACGTCT...CGTTGTTCTGTTTTTCCAGATGATTCTGTCGTAAAGTGATGCTATGTTGTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCAGACACAGGCTGCAGTaGCTCGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSRHRLQ*LEITPL
Trigger: CAGTGGCGTGATCTCGAGTCACTGCAGCCTGTGTCT...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAACTGCGTCATAGAAAGTaGCCGTGCCGTTCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTELRHRK*PCRSRK
Trigger: TTTCCTTGAACGGCACGGTCACTTTCTATGACGCAG...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCGAGGAAGCGCTTGAGTaGATTCCCTGGCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSEEALE*IPWLQV
Trigger: GACCTGCAGCCAGGGAATGCACTCAAGCGCTTCCTC...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CATCACCGTCTGCATCCACAAGACACGGGTAATTTTCATTTCCATCCAGCAAGTAGGCCCGACACACTCTaGCGCTTCTTCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HHRLHPQDTGNFHFHPASRPDTL*RFFCFL
Trigger: GAGGAAGCAGAAGAAGCGGCAGAGTGTGTCGGGCCT...ACTTGCTGGATGGAAATGAAAATTACCCGTGTCTTGTGGATGCAGACGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
3UTR CAA 72 bp GATTTTTGGCTCAAAAACCTAAGCATCCTCCAGCTTTaGCTACCATCTGTCCCTCGGCTGGCTGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: DFWLKNLSILQL*LPSVPRLAEDC
Trigger: GCAGTCCTCAGCCAGCCGAGGGACAGATGGTAGCAAAAGCTGGAGGATGCTTAGGTTTTTGAGCCAAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCAGTCCAGCTGGCACTaGGTGTGTGGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TLNREQMVSFDKADESASQSSWH*VCGPRP
Trigger: AGGACGAGGCCCACACACTCAGTGCCAGCTGGACTG...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCAGCCTACAGGCTGCTTaGCTGAAGGGGTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSSLQAA*LKGSPH
Trigger: ATGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCT...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCGTGGGTGGCAAGGGTaGCAGCCGTCCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TLNREQMVSFDKADESASRGWQG*QPSSSH
Trigger: GTGAGAAGAGGACGGCTGCCACCCTTGCCACCCACG...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTCCAAGCAGAGGCGTCTaGTCCACTCCTGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLNREQMVSFDKADESASPSRGV*STPGAP
Trigger: TGGAGCCCCAGGAGTGGACCAGACGCCTCTGCTTGG...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp CAAGACACGGGTAATTTTCATTTCCATCCAGCAAGTGAAGGTATCTCCGCTCCTTCAGGGCCATCTAGATaGCAGACTGGTTCCACAACG +
Preference number: 4 (lower is better)
Translates to: QDTGNFHFHPASEGISAPSGPSR*QTGSTT
Trigger: CGTTGTGGAACCAGTCTGTCATCTAGATGGCCCTGA...AGGAGCGGAGATACCTTCACTTGCTGGATGGAAATGAAAATTACCCGTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR GCA 90 bp CAATCCAACAGCAGTATGAAGAGACGCAATTCTGCCAATTCTAAGGTCACATTACTCTGCCGCTTCTTCTaGTTCCTCTGCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QSNSSMKRRNSANSKVTLLCRFF*FLCSSA
Trigger: GGCCGAGGAGCAGAGGAAGCAGAAGAAGCGGCAGAG...TAATGTGACCTTAGAATTGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GCCAAGCTGCATCCTGGCATGATATGGTTTTACAAGATGCTGCGTCATAGAAAGGGGCTGTGGGGCTCTTaGAGATGCTTCCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: AKLHPGMIWFYKMLRHRKGLWGS*RCFPKS
Trigger: TGATTTTGGGAAGCATCTGCAAGAGCCCCACAGCCC...CTTTCTATGACGCAGCATCTTGTAAAACCATATCATGCCAGGATGCAGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GTGCTTAGCCGCTGCTGTGTGATCACAGAGTCTTTACACAAGCCTCGATGGTGCTGCCAAGCTGCATCCTaGCATGATATGGTTTTACAA +
Preference number: 4 (lower is better)
Translates to: VLSRCCVITESLHKPRWCCQAAS*HDMVLQ
Trigger: TTGTAAAACCATATCATGCCAGGATGCAGCTTGGCA...GCACCATCGAGGCTTGTGTAAAGACTCTGTGATCACACAGCAGCGGCTAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAACAGAGACACCTGTGCTaGGAGTTAAATACATTTCCA +
Preference number: 4 (lower is better)
Translates to: HGRGGLTWTFTTETSTTEQRHLC*ELNTFP
Trigger: TGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTG...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GTGCTTAGCCGCTGCTGTGTGATCACAGAGTCTTTACACAAGCCTCGATGGTGCTTATGTGTTTTCATCTaGAAAACCAAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VLSRCCVITESLHKPRWCLCVFI*KTKCPS
Trigger: GCTGGGACACTTGGTTTTCCAGATGAAAACACATAA...GCACCATCGAGGCTTGTGTAAAGACTCTGTGATCACACAGCAGCGGCTAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR TCA 90 bp AACGACAACATAGCATCACTTTACGACAGAATCATCTGGAAAAACAGAACAACGTGTCCTGCAAGGCTCTaGAGAGCCACCCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: NDNIASLYDRIIWKNRTTCPARL*RATQLL
Trigger: TAACAGCTGGGTGGCTCTTCAGAGCCTTGCAGGACA...CGTTGTTCTGTTTTTCCAGATGATTCTGTCGTAAAGTGATGCTATGTTGTCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR GCA 90 bp GTGGCACTTGTTACTTCCAAAAACAAATCAGAAGTCGTTTTCTTAACCTTTGTCATTAGGCGGTTCCTGTaGAGGCCCGACACACTCTGC +
Preference number: 4 (lower is better)
Translates to: VALVTSKNKSEVVFLTFVIRRFL*RPDTLC
Trigger: GCAGAGTGTGTCGGGCCTGCACAGGAACCGCCTAAT...GACAAAGGTTAAGAAAACGACTTCTGATTTGTTTTTGGAAGTAACAAGTGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CCA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCTGCAAATCTGCAGACTaGTGGCACTTGTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: GVKKTSETPVLRVKYISSCKSAD*WHLLLP
Trigger: TGGAAGTAACAAGTGCCACCAGTCTGCAGATTTGCA...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp TGTCTTCTCACTGTTGGTTATTGGTGGGAAGGAAATCACATCACCGTCTGCATCTGCAAATCTGCAGACTaGTGGCACTTGTTACTTCCA +
Preference number: 4 (lower is better)
Translates to: CLLTVGYWWEGNHITVCICKSAD*WHLLLP
Trigger: TGGAAGTAACAAGTGCCACCAGTCTGCAGATTTGCA...GATGCAGACGGTGATGTGATTTCCTTCCCACCAATAACCAACAGTGAGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTATACACGAAGACACATaGACGTGGGGGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: TLNREQMVSFDKADESASIHEDT*TWGSDL
Trigger: CAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTAT...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp CTTTGTCTTCTCACTGTTGGTTATTGGTGGGAAGGAAATCACATCACCGTCTGCCTGTTAAGAAGCTTCTaGGTTCTGGTAGCATTAGGC +
Preference number: 4 (lower is better)
Translates to: LCLLTVGYWWEGNHITVCLLRSF*VLVALG
Trigger: GCCTAATGCTACCAGAACCCAGAAGCTTCTTAACAG...GCAGACGGTGATGTGATTTCCTTCCCACCAATAACCAACAGTGAGAAGACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR GCA 90 bp CATCCTTGCAAATCTGCAGACTGGTGGCACTTGTTACTTCCAAAAACAAATCAGAATCACATCACCGTCTaGATCCACAAGACACGGGTA +
Preference number: 4 (lower is better)
Translates to: HPCKSADWWHLLLPKTNQNHITV*IHKTRV
Trigger: TACCCGTGTCTTGTGGATGCAGACGGTGATGTGATT...CTGATTTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGCAGATTTGCAAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CCA 90 bp CACCGTCTGCATCCACAAGACACGGGTAATTTTCATTTCCATCCAGCAAGTGAAACTGTTGGTTATTGGTaGGAAGGAAATCACATCACC +
Preference number: 4 (lower is better)
Translates to: HRLHPQDTGNFHFHPASETVGYW*EGNHIT
Trigger: GGTGATGTGATTTCCTTCCCACCAATAACCAACAGT...TTCACTTGCTGGATGGAAATGAAAATTACCCGTGTCTTGTGGATGCAGACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CCA 90 bp CAATCCAACAGCAGTATGAAGAGACGCAATTCTGCCAATTCTAAGGTCACATTACGCACATGTGGTGCCTaGACATACACGAAGACACAT +
Preference number: 4 (lower is better)
Translates to: QSNSSMKRRNSANSKVTLRTCGA*TYTKTH
Trigger: ATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG...TAATGTGACCTTAGAATTGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AACGACAACATAGCATCACTTTACGACAGAATCATCTGGAAAAACAGAACAACGACAACTAAAGGTGTGTaGGCTGTGGGGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NDNIASLYDRIIWKNRTTTTKGV*AVGLLQ
Trigger: CTGCAAGAGCCCCACAGCCCACACACCTTTAGTTGT...CGTTGTTCTGTTTTTCCAGATGATTCTGTCGTAAAGTGATGCTATGTTGTCGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp GGAAGGAAATCACATCACCGTCTGCATCCACAAGACACGGGTAATTTTCATTTCCTCACTGTTGGTTATTaGTGGGAAGGAAATCACATC +
Preference number: 4 (lower is better)
Translates to: GRKSHHRLHPQDTGNFHFLTVGY*WEGNHI
Trigger: GATGTGATTTCCTTCCCACCAATAACCAACAGTGAG...GAAATGAAAATTACCCGTGTCTTGTGGATGCAGACGGTGATGTGATTTCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR TCA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTAGCTGCATCCTGGCATaGTATGGTTTTACAAGATGC +
Preference number: 4 (lower is better)
Translates to: TLNREQMVSFDKADESASSCILA*YGFTRC
Trigger: GCATCTTGTAAAACCATATCATGCCAGGATGCAGCT...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp AATTTTCATTTCCATCCAGCAAGTGAAGGTATCTCCGCTCCTAACACCTTCCACAAATCTGCAGACTGGTaGCACTTGTTACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: NFHFHPASEGISAPNTFHKSADW*HLLLPK
Trigger: TTTTGGAAGTAACAAGTGCCACCAGTCTGCAGATTT...GTGGAAGGTGTTAGGAGCGGAGATACCTTCACTTGCTGGATGGAAATGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CCA 90 bp CATCCTTGCAAATCTGCAGACTGGTGGCACTTGTTACTTCCAAAAACAAATCAGTTGTCTTCTCACTGTTaGTTATTGGTGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: HPCKSADWWHLLLPKTNQLSSHC*LLVGRK
Trigger: TTTCCTTCCCACCAATAACCAACAGTGAGAAGACAA...CTGATTTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGCAGATTTGCAAGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR GCA 90 bp CAATCCAACAGCAGTATGAAGAGACGCAATTCTGCCAATTCTAAGGTCACATTACATCAGAGACACCTGTaGTGCGAGTTAAATACATTT +
Preference number: 4 (lower is better)
Translates to: QSNSSMKRRNSANSKVTLHQRHL*CELNTF
Trigger: AAATGTATTTAACTCGCAGCACAGGTGTCTCTGATG...TAATGTGACCTTAGAATTGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CCA 90 bp ACATCCTTGCAAATCTGCAGACTGGTGGCACTTGTTACTTCCAAAAACAAATCACCACAACGTCTCCTTTaGAAAGAGAATGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TSLQICRLVALVTSKNKSPQRLL*KENAFF
Trigger: AAAGAAAGCATTCTCTTTCCAAAGGAGACGTTGTGG...TGATTTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGCAGATTTGCAAGGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR GCA 90 bp CAATCCAACAGCAGTATGAAGAGACGCAATTCTGCCAATTCTAAGGTCACATTATATGGTTTTACAAGATaGTGCGTCATAGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: QSNSSMKRRNSANSKVTLYGFTR*CVIESD
Trigger: GTCACTTTCTATGACGCAGCATCTTGTAAAACCATA...TAATGTGACCTTAGAATTGGCAGAATTGCGTCTCTTCATACTGCTGTTGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp AGGCCGGGCCCCAGCGCGTTGCGCCGCAGCACGAGGCTGTGCAGCTaGGGCAGGCCCTGCGCCAGGCCAGGCCCCGGCGCGCGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: RPGPSALRRSTRLCS*GRPCARPGPGARKL
Trigger: GAGCTTGCGCGCGCCGGGGCCTGGCCTGGCGCAGGGCCTGCCGCAGCTGCACAGCCTCGTGCTGCGGCGCAACGCGCTGGGGCCCGGCCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp CGGCGGGGCCCAGGCCTTGGCCCGGCGGCAGCGCCTCCAGCGCGTTaGCCGACAGGTCGAGCACCCGAAGGGCAGGCAGCGGCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: RRGPGLGPAAAPPAR*PTGRAPEGQAAARA
Trigger: AGCTCGGGCCGCTGCCTGCCCTTCGGGTGCTCGACCTGTCGGGCAACGCGCTGGAGGCGCTGCCGCCGGGCCAAGGCCTGGGCCCCGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp TCGGCGGGAAAGGAGTCTAGGCAATTGCCGGTGAGGTTGAGGCTCTaGAGGCGCGGGGCGCAGCGCGCCAGGTCGGCTGGCAGCTCGCGC +
Preference number: 5 (lower is better)
Translates to: SAGKESRQLPVRLRL*RRGAQRARSAGSSR
Trigger: GCGCGAGCTGCCAGCCGACCTGGCGCGCTGCGCCCCGCGCCTGCAGAGCCTCAACCTCACCGGCAATTGCCTAGACTCCTTTCCCGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp GGCGGCCCTGGCGTCAGCGCACGACAGTCACGTGGGGAGGGGCAGTaGCCAGGTCGGCCTTGGACGGGTACACCACCTTCAGGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: GGPGVSARQSRGEGQ*PGRPWTGTPPSGSL
Trigger: AAGGGAGCCTGAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACGTGACTGTCGTGCGCTGACGCCAGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp ACAAACGCGGACAGGCGGCCCTGGCGTCAGCGCACGACAGTCACGTaGGGAGGGGCAGTGGCCAGGTCGGCCTTGGACGGGTACACCACC +
Preference number: 5 (lower is better)
Translates to: TNADRRPWRQRTTVT*GGAVARSALDGYTT
Trigger: GGTGGTGTACCCGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACGTGACTGTCGTGCGCTGACGCCAGGGCCGCCTGTCCGCGTTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp TCTTCCTCCGGCTCTCTTCCTTCTCCGAGCCCTCGGCACGGCCCTTaGCCTTCCCGCCACCACGGCCTCCGACGCGCAGGTACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SSSGSLPSPSPRHGP*PSRHHGLRRAGTPG
Trigger: TCCTGGAGTACCTGCGCGTCGGAGGCCGTGGTGGCGGGAAGGGCAAGGGCCGTGCCGAGGGCTCGGAGAAGGAAGAGAGCCGGAGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCAGCGCCTCCAGCGCGTaGCCCGACAGGTCGAGCACC +
Preference number: 5 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVSASSA*PDRSST
Trigger: GGTGCTCGACCTGTCGGGCAACGCGCTGGAGGCGCT...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp CATCCCTCCCTTCCTCCCTTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGACCCAAGGGGACAATCTaGAGGTCCTGTGGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: HPSLPPFLLPGLGRAMQRPKGTI*RSCGGR
Trigger: CCGGCCCCCACAGGACCTCAAGATTGTCCCCTTGGG...TCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAAGGGAGGAAGGGAGGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp GGCCGGGCGCAGTACAGCAGGGGCCCTTTGACGGCACGGAGCTCGTaGGTGGCAAGGGTGGCAGCCGTCCTCTTCTCACAGAGATCTTCG +
Preference number: 5 (lower is better)
Translates to: GRAQYSRGPLTARSS*VARVAAVLFSQRSS
Trigger: CGAAGATCTCTGTGAGAAGAGGACGGCTGCCACCCTTGCCACCCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGTACTGCGCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp AGCGCACGACAGTCACGTGGGGAGGGGCAGTGGCCAGGTCGGCCTTaGACGGGTACACCACCTTCAGGCTCCCTTCCAGATCCACCACCC +
Preference number: 5 (lower is better)
Translates to: SARQSRGEGQWPGRP*TGTPPSGSLPDPPP
Trigger: GGGTGGTGGATCTGGAAGGGAGCCTGAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACGTGACTGTCGTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTGTGGCCAGGTCGGCCTaGGACGGGTACACCACCTTC +
Preference number: 5 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLVARSA*DGYTTF
Trigger: GAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCAC...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp GGGTACACCACCTTCAGGCTCCCTTCCAGATCCACCACCCGGACCTaGTCCACCACCAGAAGGGAGGGCCCGTCCTTTCCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: GYTTFRLPSRSTTRT*STTRREGPSFPALG
Trigger: TCCCAGTGCTGGAAAGGACGGGCCCTCCCTTCTGGTGGTGGAGCAGGTCCGGGTGGTGGATCTGGAAGGGAGCCTGAAGGTGGTGTACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378251.3
ENST00000462356.5
CDS CCA 90 bp CCACCACGGCCTCCGACGCGCAGGTACTCCAGGATGGATCTGGTCTaGCAGCCGCTGACCATCTTCTCCAGGCGCTTGTCCCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PPRPPTRRYSRMDLV*QPLTIFSRRLSLSL
Trigger: CAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCAGATCCATCCTGGAGTACCTGCGCGTCGGAGGCCGTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp GCATCTCCCACGTCCTGCTCCTCCCCATCACCACCTTCCCGCCTCTaGTTCCTCTCCCTCCTCTTCCTCCGGCTCTCTTCCTTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: ASPTSCSSPSPPSRL*FLSLLFLRLSSFSE
Trigger: CTCGGAGAAGGAAGAGAGCCGGAGGAAGAGGAGGGAGAGGAAGCAGAGGCGGGAAGGTGGTGATGGGGAGGAGCAGGACGTGGGAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCCCCTCGGCACGGCCCTaGCCCTTCCCGCCACCACGG +
Preference number: 5 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPPSARP*PFPPPR
Trigger: CCGTGGTGGCGGGAAGGGCAAGGGCCGTGCCGAGGG...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCAGCACCAGCGTGCACACGATGGAAACCCCACCGATGCCGCTCTCCTCCGCTTGAGGTGAGGAAGCGCTaGAGTGCATTCCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AAPACTRWKPHRCRSPPLEVRKR*SAFPGC
Trigger: GCAGCCAGGGAATGCACTCAAGCGCTTCCTCACCTC...AAGCGGAGGAGAGCGGCATCGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCAACCAGCTCCTTGGCCTaGGCTTCTTTCCGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: GAPPACHCSTSVHTMETPTSSLA*ASFRPK
Trigger: CTTGGGGCGGAAAGAAGCCAAGGCCAAGGAGCTGGT...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGGCCGCTCTCCTCCGCTaGGCCCCGCTGAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWAALLR*APLSQG
Trigger: ACCCTGGCTCAGCGGGGCCAAGCGGAGGAGAGCGGC...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS TCA 90 bp CTCCGACGCGCAGGTACTCCAGGATGGATCTGGTCTGGCAGCCGCTaGCCATCTTCTCCAGGCGCTTGTCCCTCAGCTTGTTCCCACGGA +
Preference number: 5 (lower is better)
Translates to: LRRAGTPGWIWSGSR*PSSPGACPSACSHG
Trigger: TCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCAGATCCATCCTGGAGTACCTGCGCGTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp TTGAGCTTGGGGCAGTCCGCAAGCTCTGCAGGGATCTCGCTCAGCTaGTTGTTCGAGAGGTCCAACGTCTTGAGCGAGGCCAGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: LSLGQSASSAGISLS*LFERSNVLSEARWA
Trigger: CGCCCACCTGGCCTCGCTCAAGACGTTGGACCTCTCGAACAACCAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp TTCCTCCTTCCCGGGCTGGGCCGGGCCATGCAGAGAAAGGGCAGCCTCTGCCATATCTCGCTCAGCTGGTaGTTCGAGAGGTCCAACGTC +
Preference number: 5 (lower is better)
Translates to: FLLPGLGRAMQRKGSLCHISLSW*FERSNV
Trigger: GACGTTGGACCTCTCGAACAACCAGCTGAGCGAGAT...ATGGCAGAGGCTGCCCTTTCTCTGCATGGCCCGGCCCAGCCCGGGAAGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCAGAGAACCCAACGCCCTaGCACATGCCAAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: GAPPACHCSTSVHTMETPENPTP*HMPSCI
Trigger: GATGCAGCTTGGCATGTGCAAGGGCGTTGGGTTCTC...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCATCTTCTCCAGGCGCTaGTCCCTCAGCTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SSLQQGRPLANCGICLDCIFSRR*SLSLFP
Trigger: TGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGAT...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp CCATCTGTCCCTCGGCTGGCTGAGGACTGCCGATGCTTCCCAAGCAGAGGCGTCGGAAACGCACATCGGTaGGCTTCCCAAGTTTTCGGG +
Preference number: 5 (lower is better)
Translates to: PSVPRLAEDCRCFPSRGVGNAHR*ASQVFG
Trigger: CCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCC...GACGCCTCTGCTTGGGAAGCATCGGCAGTCCTCAGCCAGCCGAGGGACAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GGGGCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACAGCACTGGGATTCGTaGTGGGATCTGGAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: GAPPACHCSTSVHTMETPQHWDS*WDLEVV
Trigger: GACAACTTCCAGATCCCACAACGAATCCCAGTGCTG...TGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCTCCACCTGCCTGTCACTGCAGCACCAGCGTGCACACGATGGAAACCCCACCGAGCAGGAATCAGGTTTaGGGAGGACACAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: APPACHCSTSVHTMETPPSRNQV*GGHKAR
Trigger: CCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT...CGGTGGGGTTTCCATCGTGTGCACGCTGGTGCTGCAGTGACAGGCAGGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGCAGCCTACAGGCTGCTaGCCTGAAGGGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: ANCGICLDCPEQQESGFGQPTGC*PEGVST
Trigger: TGTGGAGACCCCTTCAGGCAAGCAGCCTGTAGGCTG...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 90 bp CCCACGGAAATTGATCTCCTTGAGCTTGGGGCAGTCCGCAAGCTCTaGAGGGATCTCGCTCAGCTGGTTGTTCGAGAGGTCCAACGTCTT +
Preference number: 5 (lower is better)
Translates to: PTEIDLLELGAVRKL*RDLAQLVVREVQRL
Trigger: AAGACGTTGGACCTCTCGAACAACCAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp CCACCAGAAGGGAGGGCCCGTCCTTTCCAGCACTGGGATTCGTTGTaGGATCTGGAAGTTGTCCAGAGACTGCATCGGCTTCAGTATCTG +
Preference number: 5 (lower is better)
Translates to: PPEGRARPFQHWDSL*DLEVVQRLHRLQYL
Trigger: CAGATACTGAAGCCGATGCAGTCTCTGGACAACTTCCAGATCCCACAACGAATCCCAGTGCTGGAAAGGACGGGCCCTCCCTTCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378251.3
ENST00000462356.5
CDS-3UTR CAA 90 bp TACATTTCCAGCATCTCACGCATCACAAGCTGCATCAGGAAAGGGCACAGCATGGAGAGGTCCAACGTCTaGAGCGAGGCCAGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: YISSISRITSCIRKGHSMERSNV*SEARWA
Trigger: CGCCCACCTGGCCTCGCTCAAGACGTTGGACCTCTC...CATGCTGTGCCCTTTCCTGATGCAGCTTGTGATGCGTGAGATGCTGGAAATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGCGGAAATTGATCTCCTaGAGCTTGGGGCAGTCCGCA +
Preference number: 5 (lower is better)
Translates to: ANCGICLDCPEQQESGFGRKLIS*SLGQSA
Trigger: TGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCG...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp TGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTGGACAAGCATCCTCCAGCTTTaGCTACCATCTGTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: CGAWTYTKTHGRGGLTWTSILQL*LPSVPR
Trigger: CCGAGGGACAGATGGTAGCAAAAGCTGGAGGATGCT...TGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCCGTTCAAGGAAACGCACATCGGTTGGCTTCCCAAGTTTTCGGGTCTCCGAACAAGGAGTCTAGGCAATaGCCGGTGAGGTTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: AVQGNAHRLASQVFGSPNKESRQ*PVRLRL
Trigger: GAGCCTCAACCTCACCGGCAATTGCCTAGACTCCTT...GTTCGGAGACCCGAAAACTTGGGAAGCCAACCGATGTGCGTTTCCTTGAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp TCAAGCCTCCAGCAGGGCAGGCCCCTGGCCAACTGTGGCATCTGCCTTGACTGCGCAGACTGGTGGCACTaGTTACTTCCAAAAACAAAT +
Preference number: 5 (lower is better)
Translates to: SSLQQGRPLANCGICLDCADWWH*LLPKTN
Trigger: ATTTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGC...GCAGTCAAGGCAGATGCCACAGTTGGCCAGGGGCCTGCCCTGCTGGAGGCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAATGTGGGATCTGGAAGTaGTCCAGAGACTGCATCGGC +
Preference number: 5 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQCGIWK*SRDCIG
Trigger: GCCGATGCAGTCTCTGGACAACTTCCAGATCCCACA...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp AGCATGTGGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGTGGGCTGTGGGGCTCTaGCAGATGCTTCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: SMWQPHPHPRSDRCVTAWWAVGL*QMLPKI
Trigger: GATTTTGGGAAGCATCTGCAAGAGCCCCACAGCCCA...CCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCCACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GCCAACTGTGGCATCTGCCTTGACTGCCCAGAGCAGCAGGAATCAGGTTTTGGGTTGTTCCCACGGAAATaGATCTCCTTGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: ANCGICLDCPEQQESGFGLFPRK*ISLSLG
Trigger: CCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAA...CCCAAAACCTGATTCCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GGCAGCCTCATCCACACCCACGCAGTGACAGATGTGTTACAGCATGGACACCAACGCTTGTCCCTCAGCTaGTTCCCACGGAAATTGATC +
Preference number: 5 (lower is better)
Translates to: GSLIHTHAVTDVLQHGHQRLSLS*FPRKLI
Trigger: GATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCG...TTGGTGTCCATGCTGTAACACATCTGTCACTGCGTGGGTGTGGATGAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp TGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTGGACAGCATCCATGACATCCTaGCAAATCTGCAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: CGAWTYTKTHGRGGLTWTASMTS*QICRLV
Trigger: CACCAGTCTGCAGATTTGCAAGGATGTCATGGATGC...TGTCCAGGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAACCCGGGCCTCTCAGGTaGACAACTAAAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: HGRGGLTWTFTTETSTTEPGPLR*TTKGVW
Trigger: CCACACACCTTTAGTTGTCAACCTGAGAGGCCCGGG...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp CATGGACGTGGGGGTCTGACCTGGACATTCACAACGGAAACGTCTACAACAGAATTGATCTCCTTGAGCTaGGGGCAGTCCGCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: HGRGGLTWTFTTETSTTELISLS*GQSASS
Trigger: AGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAA...TTCTGTTGTAGACGTTTCCGTTGTGAATGTCCAGGTCAGACCCCCACGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTAGCTCGCGCAGCCGGTaGCCGCTGAGGTTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: TLNREQMVSFDKADESASSSRSR*PLRLRL
Trigger: GAGCCTCAACCTCAGCGGCAACCGGCTGCGCGAGCT...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp CGCACATGTGGTGCCTGGACATACACGAAGACACATGGACGTGGGGGTCTGACCTTTGTCTTCTCACTGTaGGTTATTGGTGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RTCGAWTYTKTHGRGGLTFVFSL*VIGGKE
Trigger: TTCCTTCCCACCAATAACCAACAGTGAGAAGACAAA...GGTCAGACCCCCACGTCCATGTGTCTTCGTGTATGTCCAGGCACCACATGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp AGCAGGAATCAGGTTTTGGGAGGACACAAGGCAAGGCAGTCATCTGACACACCCACGGATAATTCAGCATaGCCGCATAGAAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: SRNQVLGGHKARQSSDTPTDNSA*PHRNLR
Trigger: GCGGAGGTTTCTATGCGGCAATGCTGAATTATCCGT...GGGTGTGTCAGATGACTGCCTTGCCTTGTGTCCTCCCAAAACCTGATTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCACTGTGGCATCTGCCTaGACTGCCCAGAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GVKKTSETPVLRVKYISSTVASA*TAQSSR
Trigger: CCTGCTGCTCTGGGCAGTCAAGGCAGATGCCACAGT...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS TCA 90 bp CCGCTCCTAACACCTTCCACTTCCCTCACGTCAGGGCCATCTAGATaGCAGACTGGTTCCACAACGTCTCCTTTGGAAAGAGAATGCTTT +
Preference number: 5 (lower is better)
Translates to: PLLTPSTSLTSGPSR*QTGSTTSPLERECF
Trigger: AAAGCATTCTCTTTCCAAAGGAGACGTTGTGGAACCAGTCTGTCATCTAGATGGCCCTGACGTGAGGGAAGTGGAAGGTGTTAGGAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CAA 90 bp GGGGTGAAGAAAACATCAGAGACACCTGTGCTGCGAGTTAAATACATTTCCAGCAGTTCTCGGAGGCAGTaGTCAGCAGCCGCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: GVKKTSETPVLRVKYISSSSRRQ*SAAASS
Trigger: TGAACTGGCGGCTGCTGACAACTGCCTCCGAGAACT...GCTGGAAATGTATTTAACTCGCAGCACAGGTGTCTCTGATGTTTTCTTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 90 bp CCTTTGGAAAGAGAATGCTTTCTTTGTACCCTGTTAAGAAGCTTCTaGGTTCTGGTAGCATTAGGCGGTTCCTGTGCAGGCCCGACACAC +
Preference number: 5 (lower is better)
Translates to: PLERECFLCTLLRSF*VLVALGGSCAGPTH
Trigger: GTGTGTCGGGCCTGCACAGGAACCGCCTAATGCTACCAGAACCCAGAAGCTTCTTAACAGGGTACAAAGAAAGCATTCTCTTTCCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CAA 90 bp AACGACAACATAGCATCACTTTACGACAGAATCATCTGGAAAAACAGAACAACGTACAGCAGGGGCCCTTaGACGGCACGGAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: NDNIASLYDRIIWKNRTTYSRGP*TARSSW
Trigger: CCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGTA...CGTTGTTCTGTTTTTCCAGATGATTCTGTCGTAAAGTGATGCTATGTTGTCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp ACACTGAACAGAGAACAAATGGTGTCATTCGATAAAGCTGATGAGTCTGCTTCTAGATCTTCGTGGAGCTaGGTCTGCGAGGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: TLNREQMVSFDKADESASRSSWS*VCEVRK
Trigger: CTTCCTCACCTCGCAGACCAAGCTCCACGAAGATCT...AGAAGCAGACTCATCAGCTTTATCGAATGACACCATTTGTTCTCTGTTCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS-3UTR CAA 90 bp GAAGGAAATCACATCACCGTCTGCATCCACAAGACACGGGTAATTTTCATTTCCGCATCCATGACATCCTaGCAAATCTGCAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: EGNHITVCIHKTRVIFISASMTS*QICRLV
Trigger: CACCAGTCTGCAGATTTGCAAGGATGTCATGGATGC...GGAAATGAAAATTACCCGTGTCTTGTGGATGCAGACGGTGATGTGATTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CAA 90 bp ATCACCGTCTGCATCCACAAGACACGGGTAATTTTCATTTCCATCCAGCAAGTGTCCACAACGTCTCCTTaGGAAAGAGAATGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: ITVCIHKTRVIFISIQQVSTTSP*ERECFL
Trigger: AAGAAAGCATTCTCTTTCCAAAGGAGACGTTGTGGA...CACTTGCTGGATGGAAATGAAAATTACCCGTGTCTTGTGGATGCAGACGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CAA 90 bp AATTTTCATTTCCATCCAGCAAGTGAAGGTATCTCCGCTCCTAACACCTTCCACTTTGTCTTCTCACTGTaGGTTATTGGTGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: NFHFHPASEGISAPNTFHFVFSL*VIGGKE
Trigger: TTCCTTCCCACCAATAACCAACAGTGAGAAGACAAA...GTGGAAGGTGTTAGGAGCGGAGATACCTTCACTTGCTGGATGGAAATGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CAA 90 bp TCACATCACCGTCTGCATCCACAAGACACGGGTAATTTTCATTTCCATCCAGCAAAGAGAATGCTTTCTTaGTACCCTGTTAAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SHHRLHPQDTGNFHFHPAKRMLS*YPVKKL
Trigger: AAGCTTCTTAACAGGGTACAAAGAAAGCATTCTCTT...TGCTGGATGGAAATGAAAATTACCCGTGTCTTGTGGATGCAGACGGTGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS-3UTR CAA 90 bp TCTGCAGACTGGTGGCACTTGTTACTTCCAAAAACAAATCAGAAGTCGTTTTCTGCAGACTGGTGGCACTaGTTACTTCCAAAAACAAAT +
Preference number: 5 (lower is better)
Translates to: SADWWHLLLPKTNQKSFSADWWH*LLPKTN
Trigger: ATTTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGC...AGAAAACGACTTCTGATTTGTTTTTGGAAGTAACAAGTGCCACCAGTCTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS CAA 90 bp TCGGCGGGGCCCAGGCCTTGGCCCGGCGGCAGCGCCTCCAGCGCGTaGCCCGACAGGTCGAGCACCCGAAGGGCAGGCAGCGGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: SAGPRPWPGGSASSA*PDRSSTRRAGSGPS
Trigger: GCTCGGGCCGCTGCCTGCCCTTCGGGTGCTCGACCTGTCGGGCAACGCGCTGGAGGCGCTGCCGCCGGGCCAAGGCCTGGGCCCCGCCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 72 bp CCAGGCCTTGGCCCGGCGGCAGCGCCTCCAGCGCGTTaGCCGACAGGTCGAGCACCCGAAGGGCAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: PGLGPAAAPPAR*PTGRAPEGQAA
Trigger: CGCTGCCTGCCCTTCGGGTGCTCGACCTGTCGGGCAACGCGCTGGAGGCGCTGCCGCCGGGCCAAGGCCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS TCA 72 bp CCTGTGGGGGCCGGGCGCAGTACAGCAGGGGCCCTTTaGCGGCACGGAGCTCGTGGGTGGCAAGGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: PVGAGRSTAGAL*RHGARGWQGWQ
Trigger: CTGCCACCCTTGCCACCCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGTACTGCGCCCGGCCCCCACAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 72 bp GGCTCTCTTCCTTCTCCGAGCCCTCGGCACGGCCCTTaGCCTTCCCGCCACCACGGCCTCCGACGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: GSLPSPSPRHGP*PSRHHGLRRAG
Trigger: ACCTGCGCGTCGGAGGCCGTGGTGGCGGGAAGGGCAAGGGCCGTGCCGAGGGCTCGGAGAAGGAAGAGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 72 bp TCCTGTGGGGGCCGGGCGCAGTACAGCAGGGGCCCTTaGACGGCACGGAGCTCGTGGGTGGCAAGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: SCGGRAQYSRGP*TARSSWVARVA
Trigger: TGCCACCCTTGCCACCCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGTACTGCGCCCGGCCCCCACAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp AGCGAGGCCAGGTGGGCGATGTCGGGGCTGAGTTCTCGGAGGCAGTaGTCAGCAGCCGCCAGTTCACTGAGCAGGGGCAGCGCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: SEARWAMSGLSSRRQ*SAAASSLSRGSAPG
Trigger: CCCCGGCGCGCTGCCCCTGCTCAGTGAACTGGCGGCTGCTGACAACTGCCTCCGAGAACTCAGCCCCGACATCGCCCACCTGGCCTCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp ATCTTGAGGTCCTGTGGGGGCCGGGCGCAGTACAGCAGGGGCCCTTaGACGGCACGGAGCTCGTGGGTGGCAAGGGTGGCAGCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: ILRSCGGRAQYSRGP*TARSSWVARVAAVL
Trigger: GAGGACGGCTGCCACCCTTGCCACCCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGTACTGCGCCCGGCCCCCACAGGACCTCAAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 72 bp AAGGAGTCTAGGCAATTGCCGGTGAGGTTGAGGCTCTaGAGGCGCGGGGCGCAGCGCGCCAGGTCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: KESRQLPVRLRL*RRGAQRARSAG
Trigger: GCCAGCCGACCTGGCGCGCTGCGCCCCGCGCCTGCAGAGCCTCAACCTCACCGGCAATTGCCTAGACTCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS TCA 72 bp GTTCTCGGAGGCAGTTGTCAGCAGCCGCCAGTTCACTaGGCAGGGGCAGCGCGCCGGGGCGAAAGAGCTCGG +
Preference number: 6 (lower is better)
Translates to: VLGGSCQQPPVH*AGAARRGERAR
Trigger: CCGAGCTCTTTCGCCCCGGCGCGCTGCCCCTGCTCAGTGAACTGGCGGCTGCTGACAACTGCCTCCGAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp GGCGTCAGCGCACGACAGTCACGTGGGGAGGGGCAGTaGCCAGGTCGGCCTTGGACGGGTACACCACCTTCA +
Preference number: 6 (lower is better)
Translates to: GVSARQSRGEGQ*PGRPWTGTPPS
Trigger: TGAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACGTGACTGTCGTGCGCTGACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp CAGCGCACGACAGTCACGTGGGGAGGGGCAGTGGCCAGGTCGGCCTaGGACGGGTACACCACCTTCAGGCTCCCTTCCAGATCCACCACC +
Preference number: 6 (lower is better)
Translates to: QRTTVTWGGAVARSA*DGYTTFRLPSRSTT
Trigger: GGTGGTGGATCTGGAAGGGAGCCTGAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACGTGACTGTCGTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp CAGTACAGCAGGGGCCCTTTGACGGCACGGAGCTCGTaGGTGGCAAGGGTGGCAGCCGTCCTCTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: QYSRGPLTARSS*VARVAAVLFSQ
Trigger: CTGTGAGAAGAGGACGGCTGCCACCCTTGCCACCCACGAGCTCCGTGCCGTCAAAGGGCCCCTGCTGTACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp CAGTCACGTGGGGAGGGGCAGTGGCCAGGTCGGCCTTaGACGGGTACACCACCTTCAGGCTCCCTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: QSRGEGQWPGRP*TGTPPSGSLPD
Trigger: ATCTGGAAGGGAGCCTGAAGGTGGTGTACCCGTCCAAGGCCGACCTGGCCACTGCCCCTCCCCACGTGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 72 bp AGGTGGGCGATGTCGGGGCTGAGTTCTCGGAGGCAGTaGTCAGCAGCCGCCAGTTCACTGAGCAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RWAMSGLSSRRQ*SAAASSLSRGS
Trigger: GCTGCCCCTGCTCAGTGAACTGGCGGCTGCTGACAACTGCCTCCGAGAACTCAGCCCCGACATCGCCCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS TCA 72 bp TCAGAGGTACGGGGTTTTCAGAGACGTGCAGGACCCTaGGCAGCAGCCGGCCGGCATCTCCCACGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SEVRGFQRRAGP*AAAGRHLPRPA
Trigger: AGCAGGACGTGGGAGATGCCGGCCGGCTGCTGCTCAGGGTCCTGCACGTCTCTGAAAACCCCGTACCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS GCA 72 bp ACCTTCAGGCTCCCTTCCAGATCCACCACCCGGACCTaGTCCACCACCAGAAGGGAGGGCCCGTCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: TFRLPSRSTTRT*STTRREGPSFP
Trigger: TGGAAAGGACGGGCCCTCCCTTCTGGTGGTGGAGCAGGTCCGGGTGGTGGATCTGGAAGGGAGCCTGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378251.3
ENST00000462356.5
CDS CCA 72 bp CCTCCGACGCGCAGGTACTCCAGGATGGATCTGGTCTaGCAGCCGCTGACCATCTTCTCCAGGCGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: PPTRRYSRMDLV*QPLTIFSRRLS
Trigger: GGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCAGATCCATCCTGGAGTACCTGCGCGTCGGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp GGGCAGTCCGCAAGCTCTGCAGGGATCTCGCTCAGCTaGTTGTTCGAGAGGTCCAACGTCTTGAGCGAGGCC +
Preference number: 6 (lower is better)
Translates to: GQSASSAGISLS*LFERSNVLSEA
Trigger: GGCCTCGCTCAAGACGTTGGACCTCTCGAACAACCAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp TTGTTCGAGAGGTCCAACGTCTTGAGCGAGGCCAGGTaGGCGATGTCGGGGCTGAGTTCTCGGAGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: LFERSNVLSEAR*AMSGLSSRRQL
Trigger: CAACTGCCTCCGAGAACTCAGCCCCGACATCGCCCACCTGGCCTCGCTCAAGACGTTGGACCTCTCGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 72 bp CAGTCCGCAAGCTCTGCAGGGATCTCGCTCAGCTGGTaGTTCGAGAGGTCCAACGTCTTGAGCGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QSASSAGISLSW*FERSNVLSEAR
Trigger: CCTGGCCTCGCTCAAGACGTTGGACCTCTCGAACAACCAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS TCA 72 bp GCAGGTACTCCAGGATGGATCTGGTCTGGCAGCCGCTaGCCATCTTCTCCAGGCGCTTGTCCCTCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: AGTPGWIWSGSR*PSSPGACPSAC
Trigger: ACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCAGATCCATCCTGGAGTACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp TCCAGGCGCTTGTCCCTCAGCTTGTTCCCACGGAAATTGATCTCCTaGAGCTTGGGGCAGTCCGCAAGCTCTGCAGGGATCTCGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SRRLSLSLFPRKLIS*SLGQSASSAGISLS
Trigger: GCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp GTCTGGCAGCCGCTGACCATCTTCTCCAGGCGCTTGTCCCTCAGCTaGTTCCCACGGAAATTGATCTCCTTGAGCTTGGGGCAGTCCGCA +
Preference number: 6 (lower is better)
Translates to: VWQPLTIFSRRLSLS*FPRKLISLSLGQSA
Trigger: TGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp CGCTTGTCCCTCAGCTTGTTCCCACGGAAATTGATCTCCTTGAGCTaGGGGCAGTCCGCAAGCTCTGCAGGGATCTCGCTCAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RLSLSLFPRKLISLS*GQSASSAGISLSWL
Trigger: CAACCAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp CCACCACCAGAAGGGAGGGCCCGTCCTTTCCAGCACTaGGATTCGTTGTGGGATCTGGAAGTTGTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PPPEGRARPFQH*DSLWDLEVVQR
Trigger: TCTCTGGACAACTTCCAGATCCCACAACGAATCCCAGTGCTGGAAAGGACGGGCCCTCCCTTCTGGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378251.3
ENST00000462356.5
CDS CAA 72 bp CTGGTCTGGCAGCCGCTGACCATCTTCTCCAGGCGCTaGTCCCTCAGCTTGTTCCCACGGAAATTGATCTCC +
Preference number: 6 (lower is better)
Translates to: LVWQPLTIFSRR*SLSLFPRKLIS
Trigger: GGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp ACCATCTTCTCCAGGCGCTTGTCCCTCAGCTTGTTCCCACGGAAATaGATCTCCTTGAGCTTGGGGCAGTCCGCAAGCTCTGCAGGGATC +
Preference number: 6 (lower is better)
Translates to: TIFSRRLSLSLFPRK*ISLSLGQSASSAGI
Trigger: GATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp CCACCACCAGAAGGGAGGGCCCGTCCTTTCCAGCACTGGGATTCGTaGTGGGATCTGGAAGTTGTCCAGAGACTGCATCGGCTTCAGTAT +
Preference number: 6 (lower is better)
Translates to: PPPEGRARPFQHWDS*WDLEVVQRLHRLQY
Trigger: ATACTGAAGCCGATGCAGTCTCTGGACAACTTCCAGATCCCACAACGAATCCCAGTGCTGGAAAGGACGGGCCCTCCCTTCTGGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378251.3
ENST00000462356.5
CDS GCA 72 bp ATTGATCTCCTTGAGCTTGGGGCAGTCCGCAAGCTCTaGAGGGATCTCGCTCAGCTGGTTGTTCGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: IDLLELGAVRKL*RDLAQLVVREV
Trigger: GACCTCTCGAACAACCAGCTGAGCGAGATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 72 bp TCCAGGCGCTTGTCCCTCAGCTTGTTCCCACGGAAATaGATCTCCTTGAGCTTGGGGCAGTCCGCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: SRRLSLSLFPRK*ISLSLGQSASS
Trigger: AGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 72 bp CCGCTGACCATCTTCTCCAGGCGCTTGTCCCTCAGCTaGTTCCCACGGAAATTGATCTCCTTGAGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PLTIFSRRLSLS*FPRKLISLSLG
Trigger: CCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 90 bp AGGATGGATCTGGTCTGGCAGCCGCTGACCATCTTCTCCAGGCGCTaGTCCCTCAGCTTGTTCCCACGGAAATTGATCTCCTTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: RMDLVWQPLTIFSRR*SLSLFPRKLISLSL
Trigger: CAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAAGCGCCTGGAGAAGATGGTCAGCGGCTGCCAGACCAGATCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CAA 72 bp TTGTCCCTCAGCTTGTTCCCACGGAAATTGATCTCCTaGAGCTTGGGGCAGTCCGCAAGCTCTGCAGGGATC +
Preference number: 6 (lower is better)
Translates to: LSLSLFPRKLIS*SLGQSASSAGI
Trigger: GATCCCTGCAGAGCTTGCGGACTGCCCCAAGCTCAAGGAGATCAATTTCCGTGGGAACAAGCTGAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378251.3
CDS CCA 72 bp CCCGTCCTTTCCAGCACTGGGATTCGTTGTGGGATCTaGAAGTTGTCCAGAGACTGCATCGGCTTCAGTATC +
Preference number: 6 (lower is better)
Translates to: PVLSSTGIRCGI*KLSRDCIGFSI
Trigger: GATACTGAAGCCGATGCAGTCTCTGGACAACTTCCAGATCCCACAACGAATCCCAGTGCTGGAAAGGACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378251.3
ENST00000462356.5
CDS TCA 72 bp ACACCTTCCACTTCCCTCACGTCAGGGCCATCTAGATaGCAGACTGGTTCCACAACGTCTCCTTTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: TPSTSLTSGPSR*QTGSTTSPLER
Trigger: TCTTTCCAAAGGAGACGTTGTGGAACCAGTCTGTCATCTAGATGGCCCTGACGTGAGGGAAGTGGAAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS CCA 72 bp AGAGAATGCTTTCTTTGTACCCTGTTAAGAAGCTTCTaGGTTCTGGTAGCATTAGGCGGTTCCTGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: RECFLCTLLRSF*VLVALGGSCAG
Trigger: GCCTGCACAGGAACCGCCTAATGCTACCAGAACCCAGAAGCTTCTTAACAGGGTACAAAGAAAGCATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1
CDS CAA 90 bp ACAGACTGGTTCCACAACGTCTCCTTTGGAAAGAGAATGCTTTCTTaGTACCCTGTTAAGAAGCTTCTGGGTTCTGGTAGCATTAGGCGG +
Preference number: 6 (lower is better)
Translates to: TDWFHNVSFGKRMLS*YPVKKLLGSGSIRR
Trigger: CCGCCTAATGCTACCAGAACCCAGAAGCTTCTTAACAGGGTACAAAGAAAGCATTCTCTTTCCAAAGGAGACGTTGTGGAACCAGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479239.1