Pregenerated sensors for LRRC43 (Homo sapiens)
Ensembl gene IDs: ENSG00000158113Ensembl transcript IDs: ENST00000339777.5, ENST00000537113.5, ENST00000537729.5, ENST00000537733.1, ENST00000538800.1, ENST00000541498.5
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGCTGTCGATGGTGAGGCCGCGGTAGTAGGGCACCAAGGCCAGTaGGTTTCCCTGCAGCACCAGGAGTCGCAGGTGCCGGAGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: QAVDGEAAVVGHQGQ*VSLQHQESQVPEGP Trigger: AGGACCCTCCGGCACCTGCGACTCCTGGTGCTGCAGGGAAACCCACTGGCCTTGGTGCCCTACTACCGCGGCCTCACCATCGACAGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CCA 90 bp | CCCTACACGGCGAACATGCGCAGAGCCTCCTCCGCCGAGCGGCACTaGTTCAGCTGGATCTGCACCTCTACGGTCAGGGGCTCAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: PYTANMRRASSAERH*FSWICTSTVRGSGW Trigger: CCACCCTGAGCCCCTGACCGTAGAGGTGCAGATCCAGCTGAACCAGTGCCGCTCGGCGGAGGAGGCTCTGCGCATGTTCGCCGTGTAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS GCA 90 bp | GGCACCAAGGCCAGTGGGTTTCCCTGCAGCACCAGGAGTCGCAGGTaGCGGAGGGTCCTCAGGCTGGTGACCATGCTCTGCAGGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: GTKASGFPCSTRSRR*RRVLRLVTMLCRSV Trigger: GACAGACCTGCAGAGCATGGTCACCAGCCTGAGGACCCTCCGGCACCTGCGACTCCTGGTGCTGCAGGGAAACCCACTGGCCTTGGTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS GCA 90 bp | AGGAGTCGCAGGTGCCGGAGGGTCCTCAGGCTGGTGACCATGCTCTaGAGGTCTGTCAGGTCGTTGAAGCCCAGGTCCAGGGAGACGAGG | + |
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Preference number: 5 (lower is better) Translates to: RSRRCRRVLRLVTML*RSVRSLKPRSRETR Trigger: CCTCGTCTCCCTGGACCTGGGCTTCAACGACCTGACAGACCTGCAGAGCATGGTCACCAGCCTGAGGACCCTCCGGCACCTGCGACTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CCA 90 bp | AAACTGTCTTCTGCATTCGAGTTGTTCAGCAGAGCCCAGGGGGAGTaGCGGCTGCGGACCAGGCCCAGCAGGGCCTCCACCGTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: KLSSAFELFSRAQGE*RLRTRPSRASTVSS Trigger: AGAGGAGACGGTGGAGGCCCTGCTGGGCCTGGTCCGCAGCCGCCACTCCCCCTGGGCTCTGCTGAACAACTCGAATGCAGAAGACAGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 ENST00000538800.1 ENST00000541498.5 |
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| CDS CCA 90 bp | CTCCACGATGGTCACGGTGGTCCCCGCCAGCAGGAAGGCCTTCAGTaGGACCAGGTCCCTGAGAGAGTGCTGCATCTCGTAACTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LHDGHGGPRQQEGLQ*DQVPERVLHLVTAG Trigger: CCCTGCAGTTACGAGATGCAGCACTCTCTCAGGGACCTGGTCCCACTGAAGGCCTTCCTGCTGGCGGGGACCACCGTGACCATCGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS TCA 90 bp | CTGCAGAGGCCCTCGGCATCTGCAAGATGGTCGAAGGCCCCGAGATaGCAGACAGCTCCGACTCTCCTGACTCCTCCACCTCAGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: LQRPSASARWSKAPR*QTAPTLLTPPPQTP Trigger: TGGAGTCTGAGGTGGAGGAGTCAGGAGAGTCGGAGCTGTCTGTCATCTCGGGGCCTTCGACCATCTTGCAGATGCCGAGGGCCTCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS GCA 90 bp | CTTTCCAAGGGGCCTAGAAGTTTGTTGTGGCCTAACCCCAAGTGCTaGAGGCCGGCGGGTGGGTGGGCACACAGACACTCCATGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSKGPRSLLWPNPKC*RPAGGWAHRHSMLL Trigger: CAGCAGCATGGAGTGTCTGTGTGCCCACCCACCCGCCGGCCTGCAGCACTTGGGGTTAGGCCACAACAAACTTCTAGGCCCCTTGGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 |
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| CDS GCA 90 bp | CGCAGCCTCAACTTGGCCAGCTCTTCTGCAGAGGCCCTCGGCATCTaGAAGATGGTCGAAGGCCCCGAGATGACAGACAGCTCCGACTCT | + |
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Preference number: 5 (lower is better) Translates to: RSLNLASSSAEALGI*KMVEGPEMTDSSDS Trigger: AGAGTCGGAGCTGTCTGTCATCTCGGGGCCTTCGACCATCTTGCAGATGCCGAGGGCCTCTGCAGAAGAGCTGGCCAAGTTGAGGCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS GCA 90 bp | GCAGAGCCGGGGATCTATACGCAGCCTCAACTTGGCCAGCTCTTCTaGAGAGGCCCTCGGCATCTGCAAGATGGTCGAAGGCCCCGAGAT | + |
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Preference number: 5 (lower is better) Translates to: AEPGIYTQPQLGQLF*RGPRHLQDGRRPRD Trigger: ATCTCGGGGCCTTCGACCATCTTGCAGATGCCGAGGGCCTCTGCAGAAGAGCTGGCCAAGTTGAGGCTGCGTATAGATCCCCGGCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS CCA 90 bp | GGGCCTCCACCGTCTCCTCTCCGGGGCTCACCACATCCTCCTCTCTaGGGACAAGCTCCCTCCAAGTTCGCCAAGTTTGAGGAAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: GPPPSPLRGSPHPPL*GQAPSKFAKFEEES Trigger: GCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAGGAGGATGTGGTGAGCCCCGGAGAGGAGACGGTGGAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 ENST00000538800.1 ENST00000541498.5 |
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| CDS GCA 90 bp | AGACTTTCCAAGGGGCCTAGAAGTTTGTTGTGGCCTAACCCCAAGTaGTGCAGGCCGGCGGGTGGGTGGGCACACAGACACTCCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: RLSKGPRSLLWPNPK*CRPAGGWAHRHSML Trigger: CAGCATGGAGTGTCTGTGTGCCCACCCACCCGCCGGCCTGCAGCACTTGGGGTTAGGCCACAACAAACTTCTAGGCCCCTTGGAAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 |
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| CDS TCA 90 bp | ACATCCTCCTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTTaGGGAAGAAAGCGCGACTTATTCCAGCTGCCGGCACCGCACGGG | + |
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Preference number: 5 (lower is better) Translates to: TSSSLGTSSLQVRQV*GRKRDLFQLPAPHG Trigger: CCCGTGCGGTGCCGGCAGCTGGAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAGGAGGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000541498.5 |
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| CDS TCA 90 bp | CGGGCCTGGGTTCCGGGTCTAAGACAGAGGTGTCCAGGACTCCTCTaGTGTTTCCGATGGTCACCACAAACTGCGCCTCCTGTGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: RAWVPGLRQRCPGLL*CFRWSPQTAPPVPR Trigger: TCTTGGCACAGGAGGCGCAGTTTGTGGTGACCATCGGAAACATCAGAGGAGTCCTGGACACCTCTGTCTTAGACCCGGAACCCAGGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS GCA 90 bp | TCTTCTTTGAATCCCTGGCCAACGTCAGCCTGTCAGATGTCAATGTaGGGACCACGCCGAAGTTGCACACGGTGGACACCAGGGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSLNPWPTSACQMSM*GPRRSCTRWTPGAP Trigger: GGGAGCCCCTGGTGTCCACCGTGTGCAACTTCGGCGTGGTCCGCACATTGACATCTGACAGGCTGACGTTGGCCAGGGATTCAAAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537733.1 |
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| CDS TCA 90 bp | ACATCCTCCTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTTaGGGAAGAAAGCGCGACTTATTATCTTGCGTGCTCGACAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TSSSLGTSSLQVRQV*GRKRDLLSCVLDSC Trigger: GCAGCTGTCGAGCACGCAAGATAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAGGAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537729.5 |
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| CDS CCA 90 bp | TGTCTTTCTCCTTCCCTTTCTTGTCTTTCTCCCCCTTTCCTTTCTTaGCAGACAGGGGACTGTCAACAGCAGGTAGCACCACAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: CLSPSLSCLSPPFLS*QTGDCQQQVAPQAR Trigger: CCTGGCCTGTGGTGCTACCTGCTGTTGACAGTCCCCTGTCTGCCAAGAAAGGAAAGGGGGAGAAAGACAAGAAAGGGAAGGAGAAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000541498.5 |
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| CDS GCA 90 bp | CCTGAGGTTGGATTTTCTTTGTGCACGTCAATTACAGCAACATATTaGAAGCAGTTGACTGCAGAAGTAGCTGTAAGAATCCAGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PEVGFSLCTSITATY*KQLTAEVAVRIQLS Trigger: AGACAGCTGGATTCTTACAGCTACTTCTGCAGTCAACTGCTTGCAATATGTTGCTGTAATTGACGTGCACAAAGAAAATCCAACCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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| CDS GCA 72 bp | CCGCACGGGAACTCGCGCAGACACAGCTTCCGCAAGTaGTCGCGCACGGCCGCGCTCACGGTCCCGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PHGNSRRHSFRK*SRTAALTVPVP Trigger: CGGGACCGGGACCGTGAGCGCGGCCGTGCGCGAGCACTTGCGGAAGCTGTGTCTGCGCGAGTTCCCGTGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000541498.5 |
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| CDS TCA 72 bp | CGTCCAGCACGCAGAGCTGGGCCAGGCTGTCGATGGTaGGGCCGCGGTAGTAGGGCACCAAGGCCAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RPARRAGPGCRW*GRGSRAPRPVG Trigger: ACCCACTGGCCTTGGTGCCCTACTACCGCGGCCTCACCATCGACAGCCTGGCCCAGCTCTGCGTGCTGGACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CCA 72 bp | CGCAGAGCCTCCTCCGCCGAGCGGCACTGGTTCAGCTaGATCTGCACCTCTACGGTCAGGGGCTCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RRASSAERHWFS*ICTSTVRGSGW Trigger: CCACCCTGAGCCCCTGACCGTAGAGGTGCAGATCCAGCTGAACCAGTGCCGCTCGGCGGAGGAGGCTCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS GCA 72 bp | GCCAGTGGGTTTCCCTGCAGCACCAGGAGTCGCAGGTaGCGGAGGGTCCTCAGGCTGGTGACCATGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASGFPCSTRSRR*RRVLRLVTMLC Trigger: GCAGAGCATGGTCACCAGCCTGAGGACCCTCCGGCACCTGCGACTCCTGGTGCTGCAGGGAAACCCACTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CCA 72 bp | GATGGTGAGGCCGCGGTAGTAGGGCACCAAGGCCAGTaGGTTTCCCTGCAGCACCAGGAGTCGCAGGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: DGEAAVVGHQGQ*VSLQHQESQVP Trigger: CGGCACCTGCGACTCCTGGTGCTGCAGGGAAACCCACTGGCCTTGGTGCCCTACTACCGCGGCCTCACCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CCA 72 bp | GCGAACATGCGCAGAGCCTCCTCCGCCGAGCGGCACTaGTTCAGCTGGATCTGCACCTCTACGGTCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ANMRRASSAERH*FSWICTSTVRG Trigger: GCCCCTGACCGTAGAGGTGCAGATCCAGCTGAACCAGTGCCGCTCGGCGGAGGAGGCTCTGCGCATGTTCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS GCA 72 bp | GCCTGTCAGATGTCAATGTGCGGACCACGCCGAAGTTaGACACGGTGGACACCAGGGGCTCCCCGGCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ACQMSMCGPRRS*TRWTPGAPRRA Trigger: TGCTCGCCGGGGAGCCCCTGGTGTCCACCGTGTGCAACTTCGGCGTGGTCCGCACATTGACATCTGACAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537733.1 |
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| CDS CAA 72 bp | AGCCTGTCAGATGTCAATGTGCGGACCACGCCGAAGTaGCACACGGTGGACACCAGGGGCTCCCCGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SLSDVNVRTTPK*HTVDTRGSPAS Trigger: GCTCGCCGGGGAGCCCCTGGTGTCCACCGTGTGCAACTTCGGCGTGGTCCGCACATTGACATCTGACAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537733.1 |
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| CDS GCA 72 bp | GGGCCTAGAAGTTTGTTGTGGCCTAACCCCAAGTGCTaGAGGCCGGCGGGTGGGTGGGCACACAGACACTCC | + |
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Preference number: 6 (lower is better) Translates to: GPRSLLWPNPKC*RPAGGWAHRHS Trigger: GGAGTGTCTGTGTGCCCACCCACCCGCCGGCCTGCAGCACTTGGGGTTAGGCCACAACAAACTTCTAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 |
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| CDS GCA 72 bp | AGGTGCCGGAGGGTCCTCAGGCTGGTGACCATGCTCTaGAGGTCTGTCAGGTCGTTGAAGCCCAGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RCRRVLRLVTML*RSVRSLKPRSR Trigger: CCTGGACCTGGGCTTCAACGACCTGACAGACCTGCAGAGCATGGTCACCAGCCTGAGGACCCTCCGGCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS GCA 72 bp | AACAGCCTTTACTGCCCACGCCCTACACGGCGAACATaGGCAGAGCCTCCTCCGCCGAGCGGCACTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: NSLYCPRPTRRT*AEPPPPSGTGS Trigger: TGAACCAGTGCCGCTCGGCGGAGGAGGCTCTGCGCATGTTCGCCGTGTAGGGCGTGGGCAGTAAAGGCTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS CCA 72 bp | GGTCACGGTGGTCCCCGCCAGCAGGAAGGCCTTCAGTaGGACCAGGTCCCTGAGAGAGTGCTGCATCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: GHGGPRQQEGLQ*DQVPERVLHLV Trigger: TACGAGATGCAGCACTCTCTCAGGGACCTGGTCCCACTGAAGGCCTTCCTGCTGGCGGGGACCACCGTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS TCA 72 bp | GCCCCCGGAAGAGATGCTTCTCATTGGGAGACACGGTaGTGTCGTCCAGCACGCAGAGCTGGGCCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: APGRDASHWETR*CRPARRAGPGC Trigger: ACAGCCTGGCCCAGCTCTGCGTGCTGGACGACATCACCGTGTCTCCCAATGAGAAGCATCTCTTCCGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS GCA 72 bp | AAGGGGCCTAGAAGTTTGTTGTGGCCTAACCCCAAGTaGTGCAGGCCGGCGGGTGGGTGGGCACACAGACAC | + |
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Preference number: 6 (lower is better) Translates to: KGPRSLLWPNPK*CRPAGGWAHRH Trigger: GTGTCTGTGTGCCCACCCACCCGCCGGCCTGCAGCACTTGGGGTTAGGCCACAACAAACTTCTAGGCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 |
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| CDS CCA 72 bp | TGGCCTAACCCCAAGTGCTGCAGGCCGGCGGGTGGGTaGGCACACAGACACTCCATGCTGCTGATCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: WPNPKCCRPAGG*AHRHSMLLISL Trigger: CAATGAGATCAGCAGCATGGAGTGTCTGTGTGCCCACCCACCCGCCGGCCTGCAGCACTTGGGGTTAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 |
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| CDS CCA 72 bp | GCCAGGAGAGAATCTTCTCCTCCACGATGGTCACGGTaGTCCCCGCCAGCAGGAAGGCCTTCAGTGGGACCA | + |
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Preference number: 6 (lower is better) Translates to: ARRESSPPRWSR*SPPAGRPSVGP Trigger: TGGTCCCACTGAAGGCCTTCCTGCTGGCGGGGACCACCGTGACCATCGTGGAGGAGAAGATTCTCTCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS CCA 72 bp | GCACCACAGGCCAGGAGAGAATCTTCTCCTCCACGATaGTCACGGTGGTCCCCGCCAGCAGGAAGGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: APQARRESSPPR*SRWSPPAGRPS Trigger: TGAAGGCCTTCCTGCTGGCGGGGACCACCGTGACCATCGTGGAGGAGAAGATTCTCTCCTGGCCTGTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS TCA 72 bp | CCCTCGGCATCTGCAAGATGGTCGAAGGCCCCGAGATaGCAGACAGCTCCGACTCTCCTGACTCCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PSASARWSKAPR*QTAPTLLTPPP Trigger: AGGTGGAGGAGTCAGGAGAGTCGGAGCTGTCTGTCATCTCGGGGCCTTCGACCATCTTGCAGATGCCGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS CAA 90 bp | AAGAGATCGCCATTGAGGCTGAGCCCCCGGAAGAGATGCTTCTCATaGGGAGACACGGTGATGTCGTCCAGCACGCAGAGCTGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KRSPLRLSPRKRCFS*GDTVMSSSTQSWAR Trigger: CCTGGCCCAGCTCTGCGTGCTGGACGACATCACCGTGTCTCCCAATGAGAAGCATCTCTTCCGGGGGCTCAGCCTCAATGGCGATCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS GCA 72 bp | AACTTGGCCAGCTCTTCTGCAGAGGCCCTCGGCATCTaGAAGATGGTCGAAGGCCCCGAGATGACAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: NLASSSAEALGI*KMVEGPEMTDS Trigger: GCTGTCTGTCATCTCGGGGCCTTCGACCATCTTGCAGATGCCGAGGGCCTCTGCAGAAGAGCTGGCCAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS CAA 72 bp | CCATTGAGGCTGAGCCCCCGGAAGAGATGCTTCTCATaGGGAGACACGGTGATGTCGTCCAGCACGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLRLSPRKRCFS*GDTVMSSSTQS Trigger: GCTCTGCGTGCTGGACGACATCACCGTGTCTCCCAATGAGAAGCATCTCTTCCGGGGGCTCAGCCTCAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CAA 90 bp | CACATCCTCCTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTaGAGGAAGAAAGCGCGACTTATTCCAGCTGCCGGCACCGCACGG | + |
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Preference number: 6 (lower is better) Translates to: HILLSGDKLPPSSPS*RKKARLIPAAGTAR Trigger: CCGTGCGGTGCCGGCAGCTGGAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAGGAGGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000541498.5 |
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| CDS GCA 72 bp | GGGATCTATACGCAGCCTCAACTTGGCCAGCTCTTCTaGAGAGGCCCTCGGCATCTGCAAGATGGTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GIYTQPQLGQLF*RGPRHLQDGRR Trigger: CCTTCGACCATCTTGCAGATGCCGAGGGCCTCTGCAGAAGAGCTGGCCAAGTTGAGGCTGCGTATAGATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339777.5 |
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| CDS GCA 72 bp | AATCCCTGGCCAACGTCAGCCTGTCAGATGTCAATGTaGGGACCACGCCGAAGTTGCACACGGTGGACACCA | + |
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Preference number: 6 (lower is better) Translates to: NPWPTSACQMSM*GPRRSCTRWTP Trigger: TGGTGTCCACCGTGTGCAACTTCGGCGTGGTCCGCACATTGACATCTGACAGGCTGACGTTGGCCAGGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537733.1 |
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| CDS GCA 72 bp | AAGAGATCGCCATTGAGGCTGAGCCCCCGGAAGAGATaGTTCTCATTGGGAGACACGGTGATGTCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: KRSPLRLSPRKR*FSLGDTVMSSS Trigger: GCTGGACGACATCACCGTGTCTCCCAATGAGAAGCATCTCTTCCGGGGGCTCAGCCTCAATGGCGATCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CAA 72 bp | CTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTaGAGGAAGAAAGCGCGACTTATTCCAGCTGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LSGDKLPPSSPS*RKKARLIPAAG Trigger: GCCGGCAGCTGGAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000541498.5 |
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| CDS CAA 72 bp | CTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTaGAGGAAGAAAGCGCGACTTATTCTGCCCCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSGDKLPPSSPS*RKKARLILPRG Trigger: CCCTCGGGGCAGAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537113.5 |
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| CDS TCA 72 bp | TCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTTaGGGAAGAAAGCGCGACTTATTCCAGCTGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLGTSSLQVRQV*GRKRDLFQLPA Trigger: TGCCGGCAGCTGGAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000541498.5 |
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| CDS TCA 72 bp | GTTCCGGGTCTAAGACAGAGGTGTCCAGGACTCCTCTaGTGTTTCCGATGGTCACCACAAACTGCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VPGLRQRCPGLL*CFRWSPQTAPP Trigger: AGGAGGCGCAGTTTGTGGTGACCATCGGAAACATCAGAGGAGTCCTGGACACCTCTGTCTTAGACCCGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS TCA 72 bp | TCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTTaGGGAAGAAAGCGCGACTTATTCTGCCCCGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SLGTSSLQVRQV*GRKRDLFCPEG Trigger: TCCCTCGGGGCAGAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537113.5 |
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| CDS GCA 72 bp | AGGACTCCTCTGATGTTTCCGATGGTCACCACAAACTaGGCCTCCTGTGCCAAGAGATCGCCATTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RTPLMFPMVTTN*ASCAKRSPLRL Trigger: CAGCCTCAATGGCGATCTCTTGGCACAGGAGGCGCAGTTTGTGGTGACCATCGGAAACATCAGAGGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339777.5 ENST00000537729.5 |
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| CDS CAA 90 bp | CACATCCTCCTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTaGAGGAAGAAAGCGCGACTTATTATCTTGCGTGCTCGACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HILLSGDKLPPSSPS*RKKARLIILRARQL Trigger: CAGCTGTCGAGCACGCAAGATAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAGGAGGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537729.5 |
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| CDS CAA 72 bp | GGGGGCAGATTGGTGGCATCCACCTCCTTGATTCGATaGGCGCTCAGTACCAACTCCTCCAGCTTTAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: GGRLVASTSLIR*ALSTNSSSFRN Trigger: ATTTCTAAAGCTGGAGGAGTTGGTACTGAGCGCCAATCGAATCAAGGAGGTGGATGCCACCAATCTGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000339777.5 ENST00000537113.5 ENST00000537729.5 ENST00000538800.1 |
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| CDS TCA 72 bp | TCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTTaGGGAAGAAAGCGCGACTTATTATCTTGCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLGTSSLQVRQV*GRKRDLLSCVL Trigger: GAGCACGCAAGATAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537729.5 |
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| CDS CAA 72 bp | CTCTCTGGGGACAAGCTCCCTCCAAGTTCGCCAAGTTaGAGGAAGAAAGCGCGACTTATTATCTTGCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSGDKLPPSSPS*RKKARLIILRA Trigger: AGCACGCAAGATAATAAGTCGCGCTTTCTTCCTCAAACTTGGCGAACTTGGAGGGAGCTTGTCCCCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537729.5 |
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| CDS GCA 72 bp | AAGTTTGAGGAAGAAAGCGCGACTTATTATCTTGCGTaGTCGACAGCTGCAGTGGCTAGTGGCGACCTCATT | + |
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Preference number: 6 (lower is better) Translates to: KFEEESATYYLA*STAAVASGDLI Trigger: AATGAGGTCGCCACTAGCCACTGCAGCTGTCGAGCACGCAAGATAATAAGTCGCGCTTTCTTCCTCAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537729.5 |
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| CDS CAA 72 bp | TTGTGCACGTCAATTACAGCAACATATTGCAAGCAGTaGACTGCAGAAGTAGCTGTAAGAATCCAGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LCTSITATYCKQ*TAEVAVRIQLS Trigger: AGACAGCTGGATTCTTACAGCTACTTCTGCAGTCAACTGCTTGCAATATGTTGCTGTAATTGACGTGCACAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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| CDS TCA 72 bp | GTATCACAAATCACATGTTCATATAGGCATGGGTTTTaGAGTCCAGCAGCATATGCCCTCCAACGTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: VSQITCSYRHGF*SPAAYALQRLL Trigger: AAGTAAACGTTGGAGGGCATATGCTGCTGGACTTCAAAACCCATGCCTATATGAACATGTGATTTGTGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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| CDS GCA 72 bp | CACGTCAATTACAGCAACATATTGCAAGCAGTTGACTaGAGAAGTAGCTGTAAGAATCCAGCTGTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HVNYSNILQAVD*RSSCKNPAVFN Trigger: ATTGAAGACAGCTGGATTCTTACAGCTACTTCTGCAGTCAACTGCTTGCAATATGTTGCTGTAATTGACGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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| CDS CAA 90 bp | GGATTTTCTTTGTGCACGTCAATTACAGCAACATATTGCAAGCAGTaGACTGCAGAAGTAGCTGTAAGAATCCAGCTGTCTTCAATTAAG | + |
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Preference number: 6 (lower is better) Translates to: GFSLCTSITATYCKQ*TAEVAVRIQLSSIK Trigger: CTTAATTGAAGACAGCTGGATTCTTACAGCTACTTCTGCAGTCAACTGCTTGCAATATGTTGCTGTAATTGACGTGCACAAAGAAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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| CDS GCA 72 bp | GGATTTTCTTTGTGCACGTCAATTACAGCAACATATTaGAAGCAGTTGACTGCAGAAGTAGCTGTAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: GFSLCTSITATY*KQLTAEVAVRI Trigger: GATTCTTACAGCTACTTCTGCAGTCAACTGCTTGCAATATGTTGCTGTAATTGACGTGCACAAAGAAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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| CDS GCA 72 bp | TTTTCCAATTATGGGCCTGAGGTTGGATTTTCTTTGTaGACGTCAATTACAGCAACATATTGCAAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FSNYGPEVGFSL*TSITATYCKQL Trigger: CAACTGCTTGCAATATGTTGCTGTAATTGACGTGCACAAAGAAAATCCAACCTCAGGCCCATAATTGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537733.1 |
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