RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC41 (Homo sapiens)

Ensembl gene IDs: ENSG00000132128

Ensembl transcript IDs: ENST00000343304.10, ENST00000469150.1, ENST00000472710.2, ENST00000496156.5, ENST00000498402.2, ENST00000615587.4, ENST00000617190.5, ENST00000617760.4

Found 819 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGTGACTGCATCCTGGTCCAGCCAGTTTTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAAC +
Preference number: 1 (lower is better)
Translates to: AVTASWSSQFWKRRR*PKAPRPQRSSRLAN
Trigger: GTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR TCA 90 bp TGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATaGGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGT +
Preference number: 1 (lower is better)
Translates to: CCLHCHHLRLPPAFS*GAAGPPLITSWSGC
Trigger: ACACCCAGACCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR CCA 90 bp TGCACTGATAAGTGGGGGCTCCGGGATGAGGTACTCCAGGCTGCCTaGGATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGT +
Preference number: 1 (lower is better)
Translates to: CTDKWGLRDEVLQAA*DAASTAITFVFHQR
Trigger: ACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCCCAGGCAGCCTGGAGTACCTCATCCCGGAGCCCCCACTTATCAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR CCA 90 bp CGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAGGGTaGAACCACTGCACTGATAAGTGGGGGCTCCGGGATGAGGTACTC +
Preference number: 1 (lower is better)
Translates to: RPPPDGSDCTSDLAG*NHCTDKWGLRDEVL
Trigger: GAGTACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTGGTTCCACCCTGCCAGGTCTGAAGTGCAGTCAGAACCATCAGGGGGTGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR CCA 90 bp GTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTaGCAGGGTGGAACCACTGCACTGATAAGTGGGGGCTCCGGGATG +
Preference number: 1 (lower is better)
Translates to: VRSGHPLMVLTALQT*QGGTTALISGGSGM
Trigger: CATCCCGGAGCCCCCACTTATCAGTGCAGTGGTTCCACCCTGCCAGGTCTGAAGTGCAGTCAGAACCATCAGGGGGTGGCCGGATCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR GCA 90 bp CCTGATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTaGACTGATAAGTGGGGGCTCCGGGATGAGGTACTCCAGGCTGCC +
Preference number: 1 (lower is better)
Translates to: PDGSDCTSDLAGWNH*TDKWGLRDEVLQAA
Trigger: GGCAGCCTGGAGTACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTGGTTCCACCCTGCCAGGTCTGAAGTGCAGTCAGAACCATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR GCA 90 bp GGATCTGTAGTGACTTCAGCTGTGCCTTCTGTCCCTAGGTTGCACTaGCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCTGAT +
Preference number: 1 (lower is better)
Translates to: GSVVTSAVPSVPRLH*RRCVNSRQIRPPPD
Trigger: ATCAGGGGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGACAGAAGGCACAGCTGAAGTCACTACAGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR TCA 90 bp CCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATTTCCTATaGGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGT +
Preference number: 1 (lower is better)
Translates to: PAWSQGVFSHPHHFL*DLPPSCWSPPERKC
Trigger: ACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
3UTR GCA 90 bp GGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAGCCCTaGTGGTTCCTGAAGCCCCAGCACAGAAATATCTGTATTCCAACT +
Preference number: 1 (lower is better)
Translates to: GTRVSQPNYGWQNQP*WFLKPQHRNICIPT
Trigger: AGTTGGAATACAGATATTTCTGTGCTGGGGCTTCAGGAACCAGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR CCA 90 bp ACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAGCCCTGCTaGTTCCTGAAGCCCCAGCACAGAAATATCTGTATTCCAACTCCC +
Preference number: 1 (lower is better)
Translates to: TRVSQPNYGWQNQPC*FLKPQHRNICIPTP
Trigger: GGGAGTTGGAATACAGATATTTCTGTGCTGGGGCTTCAGGAACCAGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR GCA 90 bp TCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCCCTaGTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: SSDSSWLVSLPLRNP*FQQLIKCIDFMFLS
Trigger: AGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
3UTR GCA 90 bp TGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTaGCTTCCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: CLSMHILYCSHLPLD*LPYLKCIHSSDSSW
Trigger: CCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGGAAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
3UTR TCA 90 bp TCATGTCATGTTCTCAGGAGACAGACTGGGAAAATGGACCTCAGCTaGGTAGAGATAATGTTCTGGGACTCATACTTTTTATTCATCTCC +
Preference number: 1 (lower is better)
Translates to: SCHVLRRQTGKMDLS*VEIMFWDSYFLFIS
Trigger: GGAGATGAATAAAAAGTATGAGTCCCAGAACATTATCTCTACTCAGCTGAGGTCCATTTTCCCAGTCTGTCTCCTGAGAACATGACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR-3UTR TCA 90 bp TCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTAGCCCTGCTGGTTCCTaGAGCCCCAGCACAGAAATA +
Preference number: 2 (lower is better)
Translates to: STAPALQPLGELQKPIWLSPAGS*SPSTEI
Trigger: TATTTCTGTGCTGGGGCTTCAGGAACCAGCAGGGCT...AAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR CCA 90 bp CGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGATCCCAACCCAACTATaGCTGGCAGAACCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: RPQRSSRLANSRSPSGLMIPTQL*LAEPAL
Trigger: CAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGAT...CATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGTACTCCAGGCTGCCTaGGATGCTGCCTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPVLQAA*DAASTA
Trigger: GGCAGTGGAGGCAGCATCCCAGGCAGCCTGGAGTAC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR-3UTR GCA 90 bp AAGGCCTGGGATGAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCTCTCTAAAGCCTGGGTaGCTGCTTGAGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: KAWDESHESLTTWQVARSSLKPG*LLEEGR
Trigger: CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGA...GCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTCATCCCAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR CAA 90 bp GAGATGGGATCTGTAGTGACTTCAGCTGTGCCTTCTGTCCCTAGGTaGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCC +
Preference number: 2 (lower is better)
Translates to: EMGSVVTSAVPSVPR*HCRRCVNSRQIRPP
Trigger: GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGACAGAAGGCACAGCTGAAGTCACTACAGATCCCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGGGTTCCCAGGATACTaGGTAAGGGGCCCAAAGACT +
Preference number: 2 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPGFPGY*VRGPKT
Trigger: AGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
3UTR-3UTR GCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 2 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR GCA 90 bp AAGGCCTGGGATGAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: KAWDESHESLTTWQVARSVRMPV*WASSRP
Trigger: AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCAC...GCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTCATCCCAGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: DYKPSCENACLLGLIKASWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR GCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 2 (lower is better)
Translates to: KGPKDYKPSCENACLLGLPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR GCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 2 (lower is better)
Translates to: DYKPSCENACLLGLIKASPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGATAGAACTGGTGGTTaGGGTTCTGGGCAGCCCATG +
Preference number: 2 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRDRTGG*GSGQPM
Trigger: CATGGGCTGCCCAGAACCCCAACCACCAGTTCTATC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR-3UTR CCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGACTCCCACGTTCCCAGTaGAGAGGTCTTTGCCTTTAT +
Preference number: 2 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGLPRSQ*RGLCLY
Trigger: ATAAAGGCAAAGACCTCTCCACTGGGAACGTGGGAG...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CCA 90 bp CAGAGAGAGGAGGATGAATCCTCTGAGAAAACATCTGCCAAGGCCAGCAGGCCAAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: QREEDESSEKTSAKASRPRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...TGGCCTGCTGGCCTTGGCAGATGTTTTCTCAGAGGATTCATCCTCCTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR GCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCAGTGGAGAGGTCTTTaGCTTTATCCAGTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCQWRGL*LYPVSF
Trigger: AAAACTCACTGGATAAAGGCAAAGACCTCTCCACTG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CCA 90 bp ATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATTTCCTATGAGAAGGAAGTGTTGGTCTaGTCATATGTGACGAGGTAC +
Preference number: 2 (lower is better)
Translates to: MNQRGARVSSPILIISYEKEVLV*SYVTRY
Trigger: GTACCTCGTCACATATGACCAGACCAACACTTCCTT...CTCATAGGAAATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
3UTR TCA 72 bp GCATCCTGGTCCAGCCAGTTTTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCCCAGCGCTCCAGCCGC +
Preference number: 3 (lower is better)
Translates to: ASWSSQFWKRRR*PKAPRPQRSSR
Trigger: GCGGCTGGAGCGCTGGGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCAAAACTGGCTGGACCAGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR CCA 72 bp AAGGCCTGGGATGAGTCCCATGAGTCGCTAACCACATaGCAGGTAGCCCGGAGCCGCCGGATGGCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: KAWDESHESLTT*QVARSRRMASL
Trigger: CAGGGAAGCCATCCGGCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTCATCCCAGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR CCA 72 bp AAGTGGGGGCTCCGGGATGAGGTACTCCAGGCTGCCTaGGATGCTGCCTCCACTGCCATCACCTTCGTCTTC +
Preference number: 3 (lower is better)
Translates to: KWGLRDEVLQAA*DAASTAITFVF
Trigger: GAAGACGAAGGTGATGGCAGTGGAGGCAGCATCCCAGGCAGCCTGGAGTACCTCATCCCGGAGCCCCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR TCA 72 bp CACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATaGGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGG +
Preference number: 3 (lower is better)
Translates to: HCHHLRLPPAFS*GAAGPPLITSW
Trigger: CCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR-3UTR CAA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 3 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR GCA 72 bp GTGACTTCAGCTGTGCCTTCTGTCCCTAGGTTGCACTaGCGACGTTGTGTCAACAGCCGTCAGATCCGGCCA +
Preference number: 3 (lower is better)
Translates to: VTSAVPSVPRLH*RRCVNSRQIRP
Trigger: TGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGACAGAAGGCACAGCTGAAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR-3UTR CAA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCCAGTGGAGAGGTCTTaGCCTTTATCCAGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPPVERS*PLSSEF
Trigger: AAACTCACTGGATAAAGGCAAAGACCTCTCCACTGG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR TCA 72 bp ACTGGTGAGGTGGTGAGGTCAAACTCTAGCCCTGCCTaGGCATGCATATACTATACTGCTCCCACCTGCCCT +
Preference number: 3 (lower is better)
Translates to: TGEVVRSNSSPA*ACIYYTAPTCP
Trigger: AGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGGCTAGAGTTTGACCTCACCACCTCACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
3UTR GCA 72 bp CCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGC +
Preference number: 3 (lower is better)
Translates to: PKTINPAVRMPV*WASSRPPGPQC
Trigger: GCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR TCA 72 bp AATCTGAAGCTGCAGCAGACAAACCTCAGTTCACCCTaGCGGGATTTAGCCAGGCCCTGGGACCCTTCATTA +
Preference number: 3 (lower is better)
Translates to: NLKLQQTNLSSP*RDLARPWDPSL
Trigger: TAATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTCTGCTGCAGCTTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR CCA 72 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAG +
Preference number: 3 (lower is better)
Translates to: KTINPAVRMPVC*ASSRPPGPQCK
Trigger: CTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR CCA 72 bp TCCCAACCCAACTATGGCTGGCAGAACCAGCCCTGCTaGTTCCTGAAGCCCCAGCACAGAAATATCTGTATT +
Preference number: 3 (lower is better)
Translates to: SQPNYGWQNQPC*FLKPQHRNICI
Trigger: AATACAGATATTTCTGTGCTGGGGCTTCAGGAACCAGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
3UTR-3UTR CAA 90 bp AGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATCCTTCCGCCTTCATGTaGGAGTCCTCCAGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: RRIHEPAWSQGVFSHPHHPSAFM*ESSRKE
Trigger: TTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGG...ATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
3UTR CCA 72 bp CTGGATGAAGCTAGCCTCAGTGACACACATGACAGGTaGGGAAGTGCCCTAACCATTATCTCTAAGCTACCC +
Preference number: 3 (lower is better)
Translates to: LDEASLSDTHDR*GSALTIISKLP
Trigger: GGGTAGCTTAGAGATAATGGTTAGGGCACTTCCCCACCTGTCATGTGTGTCACTGAGGCTAGCTTCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR CCA 72 bp CACCTTTTCTGTTGTAGAAGGATTCATGAACCAGCGTaGAGCCAGGGTGTCTTCTCCCATCCTCATCATTTC +
Preference number: 3 (lower is better)
Translates to: HLFCCRRIHEPA*SQGVFSHPHHF
Trigger: GAAATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCTACAACAGAAAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
3UTR-3UTR CAA 90 bp GTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 3 (lower is better)
Translates to: VEFCSLGENHQEGLHDVCCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...GCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR TCA 72 bp GAGAGAGACGGTGGAAAGGAGAGTAGCATAGTTGTTTaGAAGCATGAATCTGCAGTCTGGTTGCCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: ERDGGKESSIVV*KHESAVWLPGF
Trigger: AAACCCAGGCAACCAGACTGCAGATTCATGCTTTCAAACAACTATGCTACTCTCCTTTCCACCGTCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
3UTR CCA 72 bp TCCTTGCTCCACAGGGCCCTGTTGAATTTTGTTCTCTaGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT +
Preference number: 3 (lower is better)
Translates to: SLLHRALLNFVL*EKIIKKGCMMF
Trigger: AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGCCCTGTGGAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR GCA 72 bp ATGCATATACTATACTGCTCCCACCTGCCCTTGGACTaGCTTCCATATCTAAAATGTATTCATTCTTCAGAT +
Preference number: 3 (lower is better)
Translates to: MHILYCSHLPLD*LPYLKCIHSSD
Trigger: ATCTGAAGAATGAATACATTTTAGATATGGAAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AACCACATGGCAGGTAGCCCGGAGCCGCCGGATGGCTTCCCTGGCTGTGACTGCTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: NHMAGSPEPPDGFPGCDCWKRRR*PKAPRP
Trigger: GGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCA...GCAGTCACAGCCAGGGAAGCCATCCGGCGGCTCCGGGCTACCTGCCATGTGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp CGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGGTGGCTAGGGGGCCCTaGATTCCCTGGCACACCAGG +
Preference number: 4 (lower is better)
Translates to: RPQRSSRLANSRSPSGLMVARGP*IPWHTR
Trigger: CCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCAC...CATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp GGCTCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGTCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GSTAPALQPLGELQKPIWSRDSC*REPEAF
Trigger: GAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGA...CCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp GAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCGCCGGATGGCTACCCAGGCGGTTCCCTaGCAGCCGGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESHESLTTWQVARSRRMATQAVP*QPEALQ
Trigger: CTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGT...AGCCATCCGGCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGTGCTGGAGCAGAAGGTaGCCGCTTGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPQRSSRLANSRSPSGLMCWSRR*PLGARS
Trigger: GCTCCTGGCACCAAGCGGTCACCTTCTGCTCCAGCA...CATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp CGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGGAGTCGCTAACCACATaGCAGGTAGCCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RPQRSSRLANSRSPSGLMESLTT*QVARSR
Trigger: GCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTC...CATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCACATCCAGCCTGGCCTaGCAGGGCCCGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RRCVNSRQIRPPPDGSDCTSSLA*QGPQAV
Trigger: GACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGT...GCAGTCAGAACCATCAGGGGGTGGCCGGATCTGACGGCTGTTGACACAACGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCGGCCGAGCTCTTCGCTaGCGCCGCCTCCCGGGACGT +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCGRALR*RRLPGR
Trigger: ACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCC...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp CGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPQRSSRLANSRSPSGLMQELSR*HSVRAA
Trigger: GGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTG...CATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp GTCCCTAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: VPRLHCRRCVNSRQIRPPSSGAG*APRGNP
Trigger: GGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCT...GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGCCCCAGGCGGTTCCCTaGCAGCCGGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRPQAVP*QPEALQ
Trigger: CTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGG...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCCCCAGGCGGTTCCCTaGCAGCCGGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPPQAVP*QPEALQ
Trigger: CTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AACCACATGGCAGGTAGCCCGGAGCCGCCGGATGGCTTCCCTGGCTGTGACTGCTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NHMAGSPEPPDGFPGCDCWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...GCAGTCACAGCCAGGGAAGCCATCCGGCGGCTCCGGGCTACCTGCCATGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRSAPGP*RVRAPF
Trigger: GAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGA...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTACATCCAGCCTGGCCTaGCAGGGCCCGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPTSSLA*QGPQAV
Trigger: GACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGT...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVWKRRR*PKAPRP
Trigger: GGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCA...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGCAGGCCCCTGACGGGTaGGAGCACCCTTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMQAPDG*EHPSSL
Trigger: CAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTG...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCCGGGCGCCGCCATCTTaGGGAGGTGCGCGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSRAPPS*GGARAR
Trigger: TCGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCG...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CCA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGGGGACGTGGCCTCCATaGTCGTTGCCGCCGCTACCT +
Preference number: 4 (lower is better)
Translates to: GSGQPMLQPLQADGTEHEGTWPP*SLPPLP
Trigger: AGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCC...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCCCCTTCATCTCGGGATaGGGCCCGGCCTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCPFISG*GPASGG
Trigger: GCCTCCCGAGGCCGGGCCCCATCCCGAGATGAAGGG...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAGGCGACATCCAGCCTaGCCTGACAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPRRHPA*PDRARR
Trigger: CCTGCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCT...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGGAGTCGCTAACCACATaGCAGGTAGCCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPESLTT*QVARSR
Trigger: GCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTC...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GGCTCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSTAPALQPLGELQKPIWRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...CCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGTGCTGGAGCAGAAGGTaGCCGCTTGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSGQPMLQPLQADGTEHECWSRR*PLGARS
Trigger: GCTCCTGGCACCAAGCGGTCACCTTCTGCTCCAGCA...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGATCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGSAPGP*RVRAPF
Trigger: GAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGA...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCACATCCAGCCTGGCCTaGCAGGGCCCGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPTSSLA*QGPQAV
Trigger: GACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGT...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTAAGGTCTGTTCCGCCTaGTGTCAGGCTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: STAPALQPLGELQKPIWLKVCSA*CQALLC
Trigger: ACACAGGAGAGCCTGACAGCAGGCGGAACAGACCTT...AAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCAGGCCCCTGACGGGTaGGAGCACCCTTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPQAPDG*EHPSSL
Trigger: CAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GGCTCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGGCTCCAAGGTGGAGATaGTGCGGAATCTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSTAPALQPLGELQKPIWAPRWR*CGIFVK
Trigger: CTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGC...CCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCCGGGCGCCGCCATCTTaGGGAGGTGCGCGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASRAPPS*GGARAR
Trigger: TCGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCG...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCCGCCTCCCGGGACGTaGCCTCCATGGTCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCPPPGT*PPWSLP
Trigger: CGGCAACGACCATGGAGGCCACGTCCCGGGAGGCGG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATCCAGAACCCCCATATaGGCGCTCACCGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKSRTPI*ALTARP
Trigger: CGGGCGGGCGGTGAGCGCCCATATGGGGGTTCTGGA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCCCTTCATCTCGGGATaGGGCCCGGCCTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRPFISG*GPASGG
Trigger: GCCTCCCGAGGCCGGGCCCCATCCCGAGATGAAGGG...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCCCCTTCATCTCGGGATaGGGCCCGGCCTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPPFISG*GPASGG
Trigger: GCCTCCCGAGGCCGGGCCCCATCCCGAGATGAAGGG...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMHSYAG*PSGLQH
Trigger: GTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTG...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMGVLPE*QVQLWA
Trigger: TGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCC...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAAGGCGACATCCAGCCTaGCCTGACAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKRRHPA*PDRARR
Trigger: CCTGCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCT...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGAACGGAGCACAGCAGTaGGGCTGGCTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: DAASTAITFVFHQRSHEENGAQQ*GWLGSP
Trigger: CGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTT...CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGCAGGTGGCGGAACTTaGGAGTGTGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPAGGGT*ECAGSW
Trigger: CCAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGCAGGTGGCGGAACTTaGGAGTGTGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPAGGGT*ECAGSW
Trigger: CCAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCATCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: HPRTGDKGIPTQLWLAEPSAPGP*RVRAPF
Trigger: GAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGA...TGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSSAPGP*RVRAPF
Trigger: GAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGA...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp ACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATCAGGCAGCTGGGATCTaGTCCATCCAAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: TAPALQPLGELQKPIWLDQAAGI*SIQSST
Trigger: TGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTG...ATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAACATCCAGCCTGGCCTaGCAGGGCCCGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPRTGDKGIPTQLWLAEPTSSLA*QGPQAV
Trigger: GACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGT...TGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGACATCCAGCCTGGCCTaGCAGGGCCCGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRTSSLA*QGPQAV
Trigger: GACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGT...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCWKRRR*PKAPRP
Trigger: GGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCA...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTGGCTTCCCTGGCTGTaGCTGCATCCTGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRWLPWL*LHPGPA
Trigger: GGCTGGACCAGGATGCAGTCACAGCCAGGGAAGCCA...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGCCTGGGATGAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCCGAGCATGAGACTGTaGGGTACGGGCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: KAWDESHESLTTWQVARSPSMRL*GTGPIT
Trigger: TGTGATGGGGCCCGTACCTCACAGTCTCATGCTCGG...GCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTCATCCCAGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPAGHQG*STSLSS
Trigger: GCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGCTCTGGGCATCTaGTTGGCTTCACTCTTACGC +
Preference number: 4 (lower is better)
Translates to: TAPALQPLGELQKPIWLDAALGI*LASLLR
Trigger: GCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGC...ATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGTCAGGCTCTCCTGTGTaGTCCGGCGTGTTACCCGAG +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMSGSPV*SGVLPE
Trigger: CTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGA...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACGGGACGTGGCCTCCATaGTCGTTGCCGCCGCTACCT +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDGTWPP*SLPPLP
Trigger: AGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCC...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCGGCCGAGCTCTTCGCTaGCGCCGCCTCCCGGGACGT +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFGRALR*RRLPGR
Trigger: ACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCC...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTCCAGAACCCCCATATaGGCGCTCACCGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLSRTPI*ALTARP
Trigger: CGGGCGGGCGGTGAGCGCCCATATGGGGGTTCTGGA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGAGTCGGCGCCAGATaGCCTGAGTTGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPRVGAR*PELRGL
Trigger: AAGGCCTCTCAACTCAGGCCATCTGGCGCCGACTCT...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGACCAGAACCCTGCGGTTaGGCTCAGCCACCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGPEPCG*AQPPAR
Trigger: CCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGG...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPHSYAG*PSGLQH
Trigger: GTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGTGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPWQVQL*ASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCA...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTAGGCGACATCCAGCCTaGCCTGACAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLRRHPA*PDRARR
Trigger: CCTGCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCT...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGAGGCGACATCCAGCCTaGCCTGACAGGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRRRHPA*PDRARR
Trigger: CCTGCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCT...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGCCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGA +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVPGLSR*LGWSTR
Trigger: TCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGG...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCSSGAG*APRGNP
Trigger: GGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCT...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCAACGGAGCACAGCAGTaGGGCTGGCTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCNGAQQ*GWLGSP
Trigger: CGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTT...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCCCCCAGGCGGTTCCCTaGCAGCCGGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLPQAVP*QPEALQ
Trigger: CTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGG...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGGAGTCGCTAACCACATaGCAGGTAGCCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRESLTT*QVARSR
Trigger: GCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTC...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGCCAGATGGCCTGAGTTaGGAGGCCTTTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVPDGLS*EAFLEG
Trigger: GCCCTCAAGAAAGGCCTCTCAACTCAGGCCATCTGG...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGCCAGATGGCCTGAGTTaGGAGGCCTTTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMPDGLS*EAFLEG
Trigger: GCCCTCAAGAAAGGCCTCTCAACTCAGGCCATCTGG...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGCGGCGCCAGATGGCCTaGGTTGAGAGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRRRQMA*VERPFL
Trigger: CAAGAAAGGCCTCTCAACTCAGGCCATCTGGCGCCG...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCGGCGCCAGATGGCCTaGGTTGAGAGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPRRQMA*VERPFL
Trigger: CAAGAAAGGCCTCTCAACTCAGGCCATCTGGCGCCG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTGCTGGAGCAGAAGGTaGCCGCTTGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDCWSRR*PLGARS
Trigger: GCTCCTGGCACCAAGCGGTCACCTTCTGCTCCAGCA...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCTTAGGCTGTGGGGCTaGGCTAGCTGGTGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPLRLWG*ASWCPF
Trigger: AAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCTCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLSAPGP*RVRAPF
Trigger: GAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGA...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGTGAGAACAGGTCACTaGGATGCAGGGCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPVRTGH*DAGHGG
Trigger: GCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCAC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRWKRRR*PKAPRP
Trigger: GGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTGGAAGAGGCGCAGGTaGCCAAAGGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLWKRRR*PKAPRP
Trigger: GGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTGGCTTCCCTGGCTGTaGCTGCATCCTGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDWLPWL*LHPGPA
Trigger: GGCTGGACCAGGATGCAGTCACAGCCAGGGAAGCCA...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGCCATCTTGGGGAGGTaGGCGAGCCCGAGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEAILGR*ASPRVS
Trigger: CGACACTCTCGGGCTCGCGCACCTCCCCAAGATGGC...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR GCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCAGHQG*STSLSS
Trigger: GCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGC...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTCAGGCCCCTGACGGGTaGGAGCACCCTTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLQAPDG*EHPSSL
Trigger: CAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTG...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGTGGCTAGGGGGCCCTaGATTCCCTGGCACACCAGG +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQVARGP*IPWHTR
Trigger: CCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCAC...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCGTGGCTAGGGGGCCCTaGATTCCCTGGCACACCAGG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCVARGP*IPWHTR
Trigger: CCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCAC...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRSRDSC*REPEAF
Trigger: GAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGA...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGTTCCCTGGCTGTGACTaGATCCTGGTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPFPGCD*ILVQPV
Trigger: AACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAA...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GTCCCTAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCTTCCCTGGCTGTGACTaGATCCTGGTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VPRLHCRRCVNSRQIRPPFPGCD*ILVQPV
Trigger: AACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAA...GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACCCAGGCTGCCTGGGATaGTGCCTCCACTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDPGCLG*CLHCHH
Trigger: GTGATGGCAGTGGAGGCAGCATCCCAGGCAGCCTGG...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTGGCCGAGCTCTTCGCTaGCGCCGCCTCCCGGGACGT +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPGRALR*RRLPGR
Trigger: ACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCC...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGCCAGAACCCTGCGGTTaGGCTCAGCCACCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRPEPCG*AQPPAR
Trigger: CCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGG...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAACTCCAGAAGCCCATCTGGCTTGATGCAGTTGGAACTGATGTCCAGCTGACACCCTTCATCTCGGGATaGGGCCCGGCCTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELQKPIWLDAVGTDVQLTPFISG*GPASGG
Trigger: GCCTCCCGAGGCCGGGCCCCATCCCGAGATGAAGGG...TGTCAGCTGGACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAGCCCTGCTCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: NRGQGYPNPTMAGRTSPAHSYAG*PSGLQH
Trigger: GTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTG...AGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDGVLPE*QVQLWA
Trigger: TGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCC...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCCTCATGGGAGGTGGCTaGGGGGTGCAGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPLMGGG*GVQLPL
Trigger: AAGAGGGAGCTGCACCCCCCAGCCACCTCCCATGAG...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPEAPGS*DLIHPK
Trigger: CTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTC...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRSSGAG*APRGNP
Trigger: GGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCT...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAACGGAGCACAGCAGTaGGGCTGGCTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLNGAQQ*GWLGSP
Trigger: CGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTT...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GTCCCTAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCACTGCACTGATAAGTaGGGGCTCCGGGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: VPRLHCRRCVNSRQIRPPHCTDK*GLRDEV
Trigger: TACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTG...GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTACGGGCCCCATCACTGCCGAAGTGACTGCTaGGCAGCCACATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLQADGTEHETVRYGPHHCRSDC*AATSEN
Trigger: GTTCTCTGATGTGGCTGCTCAGCAGTCACTTCGGCA...GTGATGGGGCCCGTACCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTTGCTGGAGCAGAAGGTaGCCGCTTGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLCWSRR*PLGARS
Trigger: GCTCCTGGCACCAAGCGGTCACCTTCTGCTCCAGCA...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGCTGGAGCAGAAGGTaGCCGCTTGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSCWSRR*PLGARS
Trigger: GCTCCTGGCACCAAGCGGTCACCTTCTGCTCCAGCA...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGTGCTGGAGCAGAAGGTaGCCGCTTGGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEECWSRR*PLGARS
Trigger: GCTCCTGGCACCAAGCGGTCACCTTCTGCTCCAGCA...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp ACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATTGGTGCCCGTTTGTATaGGGATGTAGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TAPALQPLGELQKPIWLDWCPFV*GCRRRG
Trigger: GCCTCTTCTTCTACATCCTCATACAAACGGGCACCA...ATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCCTTAGGCTGTGGGGCTaGGCTAGCTGGTGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCLRLWG*ASWCPF
Trigger: AAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAG...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCGTGAGAACAGGTCACTaGGATGCAGGGCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPVRTGH*DAGHGG
Trigger: GCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCAC...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGGGGTTCCCAGGATACTaGGTAAGGGGCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVGFPGY*VRGPKT
Trigger: AGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCC...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCACCAGCGTTCTCATaGGGAGCAGCGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSPPAFS*GAAGPP
Trigger: CGGAGGCCCCGCTGCTCCTCATGAGAACGCTGGTGG...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEAGHQG*STSLSS
Trigger: GCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGC...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLAGHQG*STSLSS
Trigger: GCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGC...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLAGHQG*STSLSS
Trigger: GCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGC...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGCAGCTCTGGGCATCTaGTTGGCTTCACTCTTACGC +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMAALGI*LASLLR
Trigger: GCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGC...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCTCAGGCTCTCCTGTGTaGTCCGGCGTGTTACCCGAG +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPSGSPV*SGVLPE
Trigger: CTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGA...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATCAGGCTCTCCTGTGTaGTCCGGCGTGTTACCCGAG +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKSGSPV*SGVLPE
Trigger: CTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCACCCTTCTTCCCTaGAGCTCGCTTGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPSTLLP*SSLETL
Trigger: AAGCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCT...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGACAGGTCTTCAGACTCTaGACCAGGCCCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGQVFRL*TRPLTG
Trigger: ACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTG...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAACAGGTCACTGAGATaGAGGGCACGGAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVNRSLR*RARRRH
Trigger: ATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTT...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKSRDSC*REPEAF
Trigger: GAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGTCTCTAAAGCCTGGGTaGCTGCTTGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMSLKPG*LLEEGR
Trigger: CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGA...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGTCTCTAAAGCCTGGGTaGCTGCTTGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSGQPMLQPLQADGTEHESLKPG*LLEEGR
Trigger: CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGA...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGGGATGCTGCCTCCACTaGCATCACCTTCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVGCCLH*HHLRLP
Trigger: TGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCC...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGTCAGAGAACAGCAGGTaGCGGAACTTGAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPSENSR*RNLRVC
Trigger: GCACACTCTCAAGTTCCGCCACCTGCTGTTCTCTGA...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCACCCTTCATCTCGGGATaGGGCCCGGCCTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPPFISG*GPASGG
Trigger: GCCTCCCGAGGCCGGGCCCCATCCCGAGATGAAGGG...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAACACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQHSYAG*PSGLQH
Trigger: GTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTG...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GACAAACCTCAGTTCACCCTGACGGGATTTAGCCAGGCCCTGGGACCCTTCATTCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DKPQFTLTGFSQALGPFIHSYAG*PSGLQH
Trigger: GTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTG...AATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPLWASA*LHSYAG
Trigger: GCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTTGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPWQVQL*ASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCA...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGGVLPE*QVQLWA
Trigger: TGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCC...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRGVLPE*QVQLWA
Trigger: TGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGCTCATGGGAGGTGGCTaGGGGGTGCAGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRLMGGG*GVQLPL
Trigger: AAGAGGGAGCTGCACCCCCCAGCCACCTCCCATGAG...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTCATGGGAGGTGGCTaGGGGGTGCAGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCLMGGG*GVQLPL
Trigger: AAGAGGGAGCTGCACCCCCCAGCCACCTCCCATGAG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCCTCATGGGAGGTGGCTaGGGGGTGCAGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSLMGGG*GVQLPL
Trigger: AAGAGGGAGCTGCACCCCCCAGCCACCTCCCATGAG...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCCTCATGGGAGGTGGCTaGGGGGTGCAGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPLMGGG*GVQLPL
Trigger: AAGAGGGAGCTGCACCCCCCAGCCACCTCCCATGAG...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCCAGAAGGTGACCGCTTaGTGCCAGGAGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPQKVTA*CQEPHG
Trigger: CCCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTG...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTGTCAGCTCCAGGATaGGCAGTGGTGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMVSAPG*AVVRTG
Trigger: ACCTGTTCTCACCACTGCCCATCCTGGAGCTGACAC...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGTCCCGCTGGCTTGGGTaGTCAACACGAATAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMSRWLG*STRIER
Trigger: CCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGA...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACCCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGA +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDPGLSR*LGWSTR
Trigger: TCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGG...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTGGCTGGGCTCCCCGTaGAAATCCCATCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRWLGSP*KSHLQL
Trigger: CAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCA...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCTGGCTGGGCTCCCCGTaGAAATCCCATCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPWLGSP*KSHLQL
Trigger: CAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCA...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKSSGAG*APRGNP
Trigger: GGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCT...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAACGGAGCACAGCAGTaGGGCTGGCTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPSSSFPMRPSAFMLESSNGAQQ*GWLGSP
Trigger: CGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTT...GGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCAACGGAGCACAGCAGTaGGGCTGGCTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSNGAQQ*GWLGSP
Trigger: CGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTT...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPTSPKS*GEAKVA
Trigger: TGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGT...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAGAGTCGCTAACCACATaGCAGGTAGCCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGESLTT*QVARSR
Trigger: GCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTC...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GGCTTCCCTGGCTGTGACTGCATCCTGGTCCAGCCAGTTTTGGAAGAGGCGCAGGATAGAACTGGTGGTTaGGGTTCTGGGCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: GFPGCDCILVQPVLEEAQDRTGG*GSGQPM
Trigger: CATGGGCTGCCCAGAACCCCAACCACCAGTTCTATC...CTGCGCCTCTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATCCCTCCCCAGGGTCTaGCCCCCACCCAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPSLPRV*PPPRRF
Trigger: GAACCGCCTGGGTGGGGGCCAGACCCTGGGGAGGGA...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAGCCCTGCTCAGGCCAGCATTCCCTaGAGAGAAGGGGAGAACGCC +
Preference number: 4 (lower is better)
Translates to: NRGQGYPNPTMAGRTSPAQASIP*REGENA
Trigger: GGCGTTCTCCCCTTCTCTCCAGGGAATGCTGGCCTG...AGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACCCAGATGGCCTGAGTTaGGAGGCCTTTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDPDGLS*EAFLEG
Trigger: GCCCTCAAGAAAGGCCTCTCAACTCAGGCCATCTGG...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGCTGTGCAGAAGAGGTaGGAACCGCTGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMAVQKR*EPLITK
Trigger: CTTTGTGATCAGCGGTTCTCACCTCTTCTGCACAGC...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGAGCATGTTACAGATGGTaGGCTGTCGGACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGACYRW*AVGHGG
Trigger: CCCGCCATGTCCGACAGCTCACCATCTGTAACATGC...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTGCCGAAGTGACTGCTaGGCAGCCACATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRCRSDC*AATSEN
Trigger: GTTCTCTGATGTGGCTGCTCAGCAGTCACTTCGGCA...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAACAGCCCCATGGTGAATaGGCTGATGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKQPHGE*ADATAA
Trigger: GGCAGCTGTTGCATCAGCTCATTCACCATGGGGCTG...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGACAGCCCCATGGTGAATaGGCTGATGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGQPHGE*ADATAA
Trigger: GGCAGCTGTTGCATCAGCTCATTCACCATGGGGCTG...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCCTTAGGCTGTGGGGCTaGGCTAGCTGGTGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSLRLWG*ASWCPF
Trigger: AAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAG...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCCTTAGGCTGTGGGGCTaGGCTAGCTGGTGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPLRLWG*ASWCPF
Trigger: AAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAG...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGCAGGCAGCTGGGATCTaGTCCATCCAAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRQAAGI*SIQSST
Trigger: TGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTG...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCGTGAGAACAGGTCACTaGGATGCAGGGCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSVRTGH*DAGHGG
Trigger: GCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCAC...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGGTGAGAACAGGTCACTaGGATGCAGGGCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRVRTGH*DAGHGG
Trigger: GCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCAC...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATGGCTTCCCTGGCTGTaGCTGCATCCTGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASWLPWL*LHPGPA
Trigger: GGCTGGACCAGGATGCAGTCACAGCCAGGGAAGCCA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAACCGAGCATGAGACTGTaGGGTACGGGCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQPSMRL*GTGPIT
Trigger: TGTGATGGGGCCCGTACCTCACAGTCTCATGCTCGG...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTCCGAGCATGAGACTGTaGGGTACGGGCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLPSMRL*GTGPIT
Trigger: TGTGATGGGGCCCGTACCTCACAGTCTCATGCTCGG...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGGCCACAAGAAGGCACTaGGCAGCTGTGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: DAASTAITFVFHQRSHEEATRRH*AAVWWM
Trigger: CATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGC...CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACACATGGCGGGAGCTGTaGAGAAGAGGTGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDTWREL*RRGENR
Trigger: GCGGTTCTCACCTCTTCTGCACAGCTCCCGCCATGT...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACA +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPSHQLG*TLQHVT
Trigger: TGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCT...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGCAGCTCTGGGCATCTaGTTGGCTTCACTCTTACGC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPAALGI*LASLLR
Trigger: GCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGAGCACCCTTCTTCCCTaGAGCTCGCTTGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMSTLLP*SSLETL
Trigger: AAGCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCT...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GAACTCCAGAAGCCCATCTGGCTTGATGCAGTTGGAACTGATGTCCAGCTGACACAGGCCCCTGACGGGTaGGAGCACCCTTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ELQKPIWLDAVGTDVQLTQAPDG*EHPSSL
Trigger: CAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTG...TGTCAGCTGGACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAACAGGTCTTCAGACTCTaGACCAGGCCCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQQVFRL*TRPLTG
Trigger: ACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTG...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGCAGGTCTTCAGACTCTaGACCAGGCCCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRQVFRL*TRPLTG
Trigger: ACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTG...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTAACAGGTCACTGAGATaGAGGGCACGGAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPNRSLR*RARRRH
Trigger: ATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTT...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLSRDSC*REPEAF
Trigger: GAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAACCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGTCTCTAAAGCCTGGGTaGCTGCTTGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRSLKPG*LLEEGR
Trigger: CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGA...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCTCTCTAAAGCCTGGGTaGCTGCTTGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPSLKPG*LLEEGR
Trigger: CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGA...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTGCTGGCTTGTCTCACTaGCCCTCAGGAACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLAGLSH*PSGTPA
Trigger: AGCAGGGGTTCCTGAGGGGCAGTGAGACAAGCCAGC...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCGGCTGCCTGGGATGCTaGCTCCACTGCCATCACCTT +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSGCLGC*LHCHHL
Trigger: AAGGTGATGGCAGTGGAGGCAGCATCCCAGGCAGCC...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCCTGATGGTTCTGACTaGACTTCAGACCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPPDGSD*TSDLAG
Trigger: CCCTGCCAGGTCTGAAGTGCAGTCAGAACCATCAGG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACGGCCGAGCTCTTCGCTaGCGCCGCCTCCCGGGACGT +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNGRALR*RRLPGR
Trigger: ACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCC...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATCCAGAACCCCCATATaGGCGCTCACCGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPSRTPI*ALTARP
Trigger: CGGGCGGGCGGTGAGCGCCCATATGGGGGTTCTGGA...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCTTGAAGTATTGGGCCTaGGAGGGCCCACACCCCGCT +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCLKYWA*EGPHPA
Trigger: AGCGGGGTGTGGGCCCTCCCAGGCCCAATACTTCAA...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGTTGAAGTATTGGGCCTaGGAGGGCCCACACCCCGCT +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEELKYWA*EGPHPA
Trigger: AGCGGGGTGTGGGCCCTCCCAGGCCCAATACTTCAA...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGATGCTTTGAAGTATTaGGCCTGGGAGGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPDALKY*AWEGPH
Trigger: GTGTGGGCCCTCCCAGGCCCAATACTTCAAAGCATC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TCACCTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAGTCGGCGCCAGATaGCCTGAGTTGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPPPKNRGQGYPNPTMAGRVGAR*PELRGL
Trigger: AAGGCCTCTCAACTCAGGCCATCTGGCGCCGACTCT...GCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCAGAACCCTGCGGTTaGGCTCAGCCACCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQPEPCG*AQPPAR
Trigger: CCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGG...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAACTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGC +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKLWASA*LHSYAG
Trigger: GCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAG...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDWQVQL*ASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCA...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKWQVQL*ASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTCAGAAGGTGACCGCTTaGTGCCAGGAGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLQKVTA*CQEPHG
Trigger: CCCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTG...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCCAGAAGGTGACCGCTTaGTGCCAGGAGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSQKVTA*CQEPHG
Trigger: CCCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTG...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPEAPGS*DLIHPK
Trigger: CTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCQELSR*HSVRAA
Trigger: GGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGCAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRQELSR*HSVRAA
Trigger: GGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTG...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCTCCCGCTGGCTTGGGTaGTCAACACGAATAGAGAGG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPSRWLG*STRIER
Trigger: CCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGA...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGA +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRPGLSR*LGWSTR
Trigger: TCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGG...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGA +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCPGLSR*LGWSTR
Trigger: TCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: GSGQPMLQPLQADGTEHESSPIM*LGGPAF
Trigger: GAATGCAGGGCCCCCTAGCCACATAATAGGCGATGA...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: RRIHEPAWSQGVFSHPHHSSGAG*APRGNP
Trigger: GGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCT...ATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGGGGAGAGGCAAAGGTaGCACTATCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKGERQR*HYPGTA
Trigger: AGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCC...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACG +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVRQKLG*ALLKQT
Trigger: CGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCT...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGCCCCAGGCGGTTCCCTaGCAGCCGGAGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FMLESSRKEVLVWSYVTRPQAVP*QPEALQ
Trigger: CTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGG...CCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp GACAAACCTCAGTTCACCCTGACGGGATTTAGCCAGGCCCTGGGACCCTTCATTTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: DKPQFTLTGFSQALGPFIWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...AATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTGGTGGTTGGGGTTCTaGGCAGCCCATGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRWWLGF*AAHASA
Trigger: GGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTCAGAACCAGCCCTGCTaGTTCCTGAAGCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLQNQPC*FLKPQH
Trigger: GTGCTGGGGCTTCAGGAACCAGCAGGGCTGGTTCTG...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AGGGGAGAACGCCTATCACCTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCAACCCAACTATGGCTaGCAGAACCAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGERLSPPPKNRGQGYPNQPNYG*QNQPCW
Trigger: CCAGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTG...GTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAGGTGATAGGCGTTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CAGAGAGAGGAGGATGAATCCTCTGAGAAAACATCTGCCAAGGCCAGCAGGCCACGGCGCCAGATGGCCTaGGTTGAGAGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QREEDESSEKTSAKASRPRRQMA*VERPFL
Trigger: CAAGAAAGGCCTCTCAACTCAGGCCATCTGGCGCCG...TGGCCTGCTGGCCTTGGCAGATGTTTTCTCAGAGGATTCATCCTCCTCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCGCATGTTACAGATGGTaGGCTGTCGGACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPACYRW*AVGHGG
Trigger: CCCGCCATGTCCGACAGCTCACCATCTGTAACATGC...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAGCATGTTACAGATGGTaGGCTGTCGGACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGACYRW*AVGHGG
Trigger: CCCGCCATGTCCGACAGCTCACCATCTGTAACATGC...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCGCAGGTGGCGGAACTTaGGAGTGTGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSAGGGT*ECAGSW
Trigger: CCAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGC...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGGCAGGTGGCGGAACTTaGGAGTGTGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQAGGGT*ECAGSW
Trigger: CCAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGC...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGATGCCGAAGTGACTGCTaGGCAGCCACATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGCRSDC*AATSEN
Trigger: GTTCTCTGATGTGGCTGCTCAGCAGTCACTTCGGCA...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAGTGAGAACAGGTCACTaGGATGCAGGGCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKVRTGH*DAGHGG
Trigger: GCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCAC...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGGAACTGATGTCCAGCTaGCAGAGAGAGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: GSGQPMLQPLQADGTEHEELMSS*QREEDE
Trigger: TTCATCCTCCTCTCTCTGTCAGCTGGACATCAGTTC...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCCCGAGCATGAGACTGTaGGGTACGGGCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLPSMRL*GTGPIT
Trigger: TGTGATGGGGCCCGTACCTCACAGTCTCATGCTCGG...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGGGTTCCCAGGATACTaGGTAAGGGGCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKGFPGY*VRGPKT
Trigger: AGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCC...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TCTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCAAGCCCTGGACAGCTTaGACACCAGCCGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPILIISYETFRLHVGVLKPWTA*TPAGGC
Trigger: GCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTT...GAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGCCAGGCAGGGACCATTaGGGAGAAGATCTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRPGRDH*GEDLPA
Trigger: CGCTGGAAGATCTTCTCCTCAATGGTCCCTGCCTGG...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGAACCTCAGTTCACCCTaGCGGGATTTAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEENLSSP*RDLARP
Trigger: GGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTT...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTGCCATCTTGGGGAGGTaGGCGAGCCCGAGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPAILGR*ASPRVS
Trigger: CGACACTCTCGGGCTCGCGCACCTCCCCAAGATGGC...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR GCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAGGCCTCCATGGTCGTTaGCGCCGCTACCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKGLHGR*RRYLTE
Trigger: TTCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCC...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR GCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQAGHQG*STSLSS
Trigger: GCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGC...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCGCAGCTCTGGGCATCTaGTTGGCTTCACTCTTACGC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCAALGI*LASLLR
Trigger: GCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGC...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAGGCTCTCCTGTGTaGTCCGGCGTGTTACCCGAG +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASSGSPV*SGVLPE
Trigger: CTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGAAAGGTCTGTTCCGCCTaGTGTCAGGCTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGKVCSA*CQALLC
Trigger: ACACAGGAGAGCCTGACAGCAGGCGGAACAGACCTT...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCCAGGTCTTCAGACTCTaGACCAGGCCCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLQVFRL*TRPLTG
Trigger: ACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTG...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCAGTGGCTAGGGGGCCCTaGATTCCCTGGCACACCAGG +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPVARGP*IPWHTR
Trigger: CCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCAC...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GACAAACCTCAGTTCACCCTGACGGGATTTAGCCAGGCCCTGGGACCCTTCATTCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 4 (lower is better)
Translates to: DKPQFTLTGFSQALGPFIPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...AATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGCCATGCTTCAGCCCCTaGAAGCTGATGGTACCGAGC +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEPCFSP*KLMVPS
Trigger: GCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGG...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRVRMPV*WASSRP
Trigger: AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCAC...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCCAAAGCCTCCTCGGGTaGAAACATCAGCTACCCCTA +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPQSLLG*KHQLPL
Trigger: TAGGGGTAGCTGATGTTTGCACCCGAGGAGGCTTTG...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGC +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCLWASA*LHSYAG
Trigger: GCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCCAGAAGGTGACCGCTTaGTGCCAGGAGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASQKVTA*CQEPHG
Trigger: CCCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTG...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACAGAAGGTGACCGCTTaGTGCCAGGAGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKQKVTA*CQEPHG
Trigger: CCCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTG...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPEAPGS*DLIHPK
Trigger: CTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTC...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCCAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASQELSR*HSVRAA
Trigger: GGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTG...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKQELSR*HSVRAA
Trigger: GGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTG...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGATCCCGCTGGCTTGGGTaGTCAACACGAATAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGSRWLG*STRIER
Trigger: CCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGA...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCACCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGA +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASPGLSR*LGWSTR
Trigger: TCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGG...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPSSPIM*LGGPAF
Trigger: GAATGCAGGGCCCCCTAGCCACATAATAGGCGATGA...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTGGCTGGGCTCCCCGTaGAAATCCCATCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRWLGSP*KSHLQL
Trigger: CAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCTGGCTGGGCTCCCCGTaGAAATCCCATCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPWLGSP*KSHLQL
Trigger: CAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCA...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTAACGGAGCACAGCAGTaGGGCTGGCTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACNGAQQ*GWLGSP
Trigger: CGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTT...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGGGGGAGAGGCAAAGGTaGCACTATCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRGERQR*HYPGTA
Trigger: AGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCC...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCGGGGAGAGGCAAAGGTaGCACTATCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCGERQR*HYPGTA
Trigger: AGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCC...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPTSPKS*GEAKVA
Trigger: TGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGT...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPRQKLG*ALLKQT
Trigger: CGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCT...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGGTACTCCAGGCTGCCTaGGATGCTGCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQVLQAA*DAASTA
Trigger: GGCAGTGGAGGCAGCATCCCAGGCAGCCTGGAGTAC...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGAGGTAGGATGCTTTaGAGTATTGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPRGRML*SIGPGR
Trigger: CCTCCCAGGCCCAATACTTCAAAGCATCCTACCTCT...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACAGAGGTAGGATGCTTTaGAGTATTGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDRGRML*SIGPGR
Trigger: CCTCCCAGGCCCAATACTTCAAAGCATCCTACCTCT...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTTTGAGAGGCCTTTCTTaGGGGCAGTTTCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPLRGLS*GQFPQS
Trigger: GGATTGAGGAAACTGCCCTCAAGAAAGGCCTCTCAA...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGAGAGGTGAGAACCGCTaGTCACAAAGACGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: DAASTAITFVFHQRSHEERGENR*SQRRLS
Trigger: TGACAGGCGTCTTTGTGATCAGCGGTTCTCACCTCT...CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCGCATGTTACAGATGGTaGGCTGTCGGACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLACYRW*AVGHGG
Trigger: CCCGCCATGTCCGACAGCTCACCATCTGTAACATGC...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTTGCCGAAGTGACTGCTaGGCAGCCACATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLCRSDC*AATSEN
Trigger: GTTCTCTGATGTGGCTGCTCAGCAGTCACTTCGGCA...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGATGCCGAAGTGACTGCTaGGCAGCCACATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGCRSDC*AATSEN
Trigger: GTTCTCTGATGTGGCTGCTCAGCAGTCACTTCGGCA...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCTTAGGCTGTGGGGCTaGGCTAGCTGGTGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSLRLWG*ASWCPF
Trigger: AAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAG...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCCAGGCAGCTGGGATCTaGTCCATCCAAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPQAAGI*SIQSST
Trigger: TGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTG...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCGCTGCGGAATCTTTGTaGAGCTTCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCAAESL*SFQCWK
Trigger: CTTCCAGCACTGGAAGCTTCACAAAGATTCCGCAGC...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTTGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPWRVEL*IAPRWR
Trigger: TCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCA...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLHCRRV*GSPVTP
Trigger: GGGTGTCACTGGAGAGCCTCACACTCTCCTACAATG...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCC +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEHCRRV*GSPVTP
Trigger: GGGTGTCACTGGAGAGCCTCACACTCTCCTACAATG...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: DAASTAITFVFHQRSHEEKSTSL*QSARFM
Trigger: CATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTT...CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGAACTGATGTCCAGCTaGCAGAGAGAGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPELMSS*QREEDE
Trigger: TTCATCCTCCTCTCTCTGTCAGCTGGACATCAGTTC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GACAAACCTCAGTTCACCCTGACGGGATTTAGCCAGGCCCTGGGACCCTTCATTGGGTTCCCAGGATACTaGGTAAGGGGCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: DKPQFTLTGFSQALGPFIGFPGY*VRGPKT
Trigger: AGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCC...AATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACAGGTTGAGGCTGAAGTaGGCTGTGCTTAGACCACTG +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDRLRLK*AVLRPL
Trigger: CAGTGGTCTAAGCACAGCTCACTTCAGCCTCAACCT...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCCTGCTCCCTTTTTATaGGGATGGCTAAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPPAPFL*GWLSAV
Trigger: TACAGCGCTTAGCCATCCTCATAAAAAGGGAGCAGG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCTGCGAAGGCCTGGGATaGGTCCATGAGTCGCTAACC +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLCEGLG*VHESLT
Trigger: GGTTAGCGACTCATGGACTCATCCCAGGCCTTCGCA...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617760.4
CDS-3UTR GCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCGGCCTCCATGGTCGTTaGCGCCGCTACCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFGLHGR*RRYLTE
Trigger: TTCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCC...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR GCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACAGCTCGGTTGCACCCTaGAGCATGTTACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDSSVAP*SMLQMV
Trigger: CACCATCTGTAACATGCTGCAGGGTGCAACCGAGCT...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAGCTCGGTTGCACCCTaGAGCATGTTACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCSSVAP*SMLQMV
Trigger: CACCATCTGTAACATGCTGCAGGGTGCAACCGAGCT...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACA +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSSHQLG*TLQHVT
Trigger: TGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCT...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTGCAGCTCTGGGCATCTaGTTGGCTTCACTCTTACGC +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLAALGI*LASLLR
Trigger: GCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGC...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCAAGGTCTGTTCCGCCTaGTGTCAGGCTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSKVCSA*CQALLC
Trigger: ACACAGGAGAGCCTGACAGCAGGCGGAACAGACCTT...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGAAGGTCTGTTCCGCCTaGTGTCAGGCTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRKVCSA*CQALLC
Trigger: ACACAGGAGAGCCTGACAGCAGGCGGAACAGACCTT...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACAGCACCCTTCTTCCCTaGAGCTCGCTTGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDSTLLP*SSLETL
Trigger: AAGCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCT...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGCACCCTTCTTCCCTaGAGCTCGCTTGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPSTLLP*SSLETL
Trigger: AAGCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCT...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGCTCCAAGGTGGAGATaGTGCGGAATCTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPAPRWR*CGIFVK
Trigger: CTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGAACAGGTCACTGAGATaGAGGGCACGGAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRNRSLR*RARRRH
Trigger: ATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTT...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GACAAACCTCAGTTCACCCTGACGGGATTTAGCCAGGCCCTGGGACCCTTCATTAACAGGTCACTGAGATaGAGGGCACGGAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: DKPQFTLTGFSQALGPFINRSLR*RARRRH
Trigger: ATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTT...AATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTGTGGCTAGGGGGCCCTaGATTCCCTGGCACACCAGG +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACVARGP*IPWHTR
Trigger: CCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCAC...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGAATCCCATCTCCAACTaGTCCAGGCAGTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GSGQPMLQPLQADGTEHENPISN*SRQFSG
Trigger: ACCAGAAAACTGCCTGGAGCAGTTGGAGATGGGATT...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTTCCCTGGCTGTGACTaGATCCTGGTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRFPGCD*ILVQPV
Trigger: AACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKVRMPV*WASSRP
Trigger: AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCAC...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAATCTCTAAAGCCTGGGTaGCTGCTTGAGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQSLKPG*LLEEGR
Trigger: CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGA...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCTCAGGAGGTAGAGACTaGAGTGAGCCGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASSGGRD*SEPRWR
Trigger: GCGCCATCTCGGCTCACTGCAGTCTCTACCTCCTGA...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp TCTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCACACCAGCCGGCGGGTaGTCATCTCCGGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: SPILIISYETFRLHVGVLTPAGG*SSPELP
Trigger: TGGGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGT...GAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR GCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGGTCCCTAGGTTGCACTaGCGACGTTGTGTCAACAGC +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRVPRLH*RRCVNS
Trigger: GCTGTTGACACAACGTCGGCAGTGCAACCTAGGGAC...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGATGCTTTGAAGTATTaGGCCTGGGAGGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLDALKY*AWEGPH
Trigger: GTGTGGGCCCTCCCAGGCCCAATACTTCAAAGCATC...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCGCCGGATGGCTTCACACTTTCCAAACTaGAAGGCCTTGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: ESHESLTTWQVARSRRMASHFPN*KALSSS
Trigger: TGATGAAGACAAGGCCTTCCAGTTTGGAAAGTGTGA...AGCCATCCGGCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCCAGAACCCTGCGGTTaGGCTCAGCCACCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACPEPCG*AQPPAR
Trigger: CCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCTCAGAGAACAGCAGGTaGCGGAACTTGAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPSENSR*RNLRVC
Trigger: GCACACTCTCAAGTTCCGCCACCTGCTGTTCTCTGA...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASWQVQL*ASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCEAPGS*DLIHPK
Trigger: CTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTC...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGTGTCAGCTCCAGGATaGGCAGTGGTGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQVSAPG*AVVRTG
Trigger: ACCTGTTCTCACCACTGCCCATCCTGGAGCTGACAC...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGTGTCAGCTCCAGGATaGGCAGTGGTGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLVSAPG*AVVRTG
Trigger: ACCTGTTCTCACCACTGCCCATCCTGGAGCTGACAC...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGTCCCGCTGGCTTGGGTaGTCAACACGAATAGAGAGG +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRSRWLG*STRIER
Trigger: CCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGA...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCSSPIM*LGGPAF
Trigger: GAATGCAGGGCCCCCTAGCCACATAATAGGCGATGA...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGCCTGGGATGAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCTCCAGGCAGTTTTCTaGTATCTCCTCATCGCCTAT +
Preference number: 4 (lower is better)
Translates to: KAWDESHESLTTWQVARSLQAVF*YLLIAY
Trigger: ATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAG...GCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTCATCCCAGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAATGGCTGGGCTCCCCGTaGAAATCCCATCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKWLGSP*KSHLQL
Trigger: CAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCA...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGGCGAGATTCATGTCATaGAAGCTCAGTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPARFMS*KLSLFR
Trigger: CCTGAAAAGACTGAGCTTCCATGACATGAATCTCGC...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCGCTGTGACTGCATCCTaGTCCAGCCAGTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCAVTAS*SSQFWK
Trigger: CTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGC...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCGATAGAACTGGTGGTTaGGGTTCTGGGCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSDRTGG*GSGQPM
Trigger: CATGGGCTGCCCAGAACCCCAACCACCAGTTCTATC...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGAAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGTGGTCACAGCTACTTaGGAGGCTAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQVVTAT*EAKVGG
Trigger: TCCTCCCACCTTAGCCTCCCAAGTAGCTGTGACCAC...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCTTCAGCCACTCAGTTaGAAGCTGGAATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPLQPLS*KLEFQG
Trigger: CCCCTGAAATTCCAGCTTCCAACTGAGTGGCTGAAG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp GAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCGCCGGATGGCTTTGAAGTATTGGGCCTaGGAGGGCTACAAAAATCAA +
Preference number: 4 (lower is better)
Translates to: ESHESLTTWQVARSRRMALKYWA*EGYKNQ
Trigger: TTGATTTTTGTAGCCCTCCCAGGCCCAATACTTCAA...AGCCATCCGGCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGATCCCAACCCAACTATaGCTGGCAGAACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRIPTQL*LAEPAL
Trigger: CAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGAT...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp GAAAGTAGCCTGGGTGGGCAGACTATTCATGTCATGTTCTCAGGAGACAGACTGCGGCGCCAGATGGCCTaGGTTGAGAGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ESSLGGQTIHVMFSGDRLRRQMA*VERPFL
Trigger: CAAGAAAGGCCTCTCAACTCAGGCCATCTGGCGCCG...CAGTCTGTCTCCTGAGAACATGACATGAATAGTCTGCCCACCCAGGCTACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTAGAGGTGAGAACCGCTaGTCACAAAGACGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLRGENR*SQRRLS
Trigger: TGACAGGCGTCTTTGTGATCAGCGGTTCTCACCTCT...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGAGGTGAGAACCGCTaGTCACAAAGACGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPRGENR*SQRRLS
Trigger: TGACAGGCGTCTTTGTGATCAGCGGTTCTCACCTCT...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCGCTGTGCAGAAGAGGTaGGAACCGCTGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCAVQKR*EPLITK
Trigger: CTTTGTGATCAGCGGTTCTCACCTCTTCTGCACAGC...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGGCTGTGCAGAAGAGGTaGGAACCGCTGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRAVQKR*EPLITK
Trigger: CTTTGTGATCAGCGGTTCTCACCTCTTCTGCACAGC...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCCAGCCCCATGGTGAATaGGCTGATGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFQPHGE*ADATAA
Trigger: GGCAGCTGTTGCATCAGCTCATTCACCATGGGGCTG...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCAGCCCCATGGTGAATaGGCTGATGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQQPHGE*ADATAA
Trigger: GGCAGCTGTTGCATCAGCTCATTCACCATGGGGCTG...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATGGTGCCCGTTTGTATaGGGATGTAGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKWCPFV*GCRRRG
Trigger: GCCTCTTCTTCTACATCCTCATACAAACGGGCACCA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGCTGCGGAATCTTTGTaGAGCTTCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQAAESL*SFQCWK
Trigger: CTTCCAGCACTGGAAGCTTCACAAAGATTCCGCAGC...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCGCTGCGGAATCTTTGTaGAGCTTCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCAAESL*SFQCWK
Trigger: CTTCCAGCACTGGAAGCTTCACAAAGATTCCGCAGC...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGCTGCGGAATCTTTGTaGAGCTTCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRAAESL*SFQCWK
Trigger: CTTCCAGCACTGGAAGCTTCACAAAGATTCCGCAGC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCGCTGCGGAATCTTTGTaGAGCTTCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPAAESL*SFQCWK
Trigger: CTTCCAGCACTGGAAGCTTCACAAAGATTCCGCAGC...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCC +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASHCRRV*GSPVTP
Trigger: GGGTGTCACTGGAGAGCCTCACACTCTCCTACAATG...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRKSTSL*QSARFM
Trigger: CATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTT...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCKSTSL*QSARFM
Trigger: CATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTT...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCGGGTTCCCAGGATACTaGGTAAGGGGCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLGFPGY*VRGPKT
Trigger: AGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCC...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGAGGTATGAAAGGGTTTaGGGCCTGAGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRRYERV*GLRAVW
Trigger: CCACACTGCTCTCAGGCCTCAAACCCTTTCATACCT...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGCTCGGTTGCACCCTaGAGCATGTTACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGSSVAP*SMLQMV
Trigger: CACCATCTGTAACATGCTGCAGGGTGCAACCGAGCT...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACA +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASSHQLG*TLQHVT
Trigger: TGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCT...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAAAGGTCTGTTCCGCCTaGTGTCAGGCTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKKVCSA*CQALLC
Trigger: ACACAGGAGAGCCTGACAGCAGGCGGAACAGACCTT...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGAGCACCCTTCTTCCCTaGAGCTCGCTTGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRSTLLP*SSLETL
Trigger: AAGCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCT...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCAGGCCCCTGACGGGTaGGAGCACCCTTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNQAPDG*EHPSSL
Trigger: CAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp GAAAGTAGCCTGGGTGGGCAGACTATTCATGTCATGTTCTCAGGAGACAGACTGCAGGTCTTCAGACTCTaGACCAGGCCCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: ESSLGGQTIHVMFSGDRLQVFRL*TRPLTG
Trigger: ACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTG...CAGTCTGTCTCCTGAGAACATGACATGAATAGTCTGCCCACCCAGGCTACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp CAGAGAGAGGAGGATGAATCCTCTGAGAAAACATCTGCCAAGGCCAGCAGGCCAAACAGGTCACTGAGATaGAGGGCACGGAGGCGACAT +
Preference number: 4 (lower is better)
Translates to: QREEDESSEKTSAKASRPNRSLR*RARRRH
Trigger: ATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTT...TGGCCTGCTGGCCTTGGCAGATGTTTTCTCAGAGGATTCATCCTCCTCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAATCCCATCTCCAACTaGTCCAGGCAGTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPNPISN*SRQFSG
Trigger: ACCAGAAAACTGCCTGGAGCAGTTGGAGATGGGATT...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp TCTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCTCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPILIISYETFRLHVGVLSRDSC*REPEAF
Trigger: GAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGA...GAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR GCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTTCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPSRDSC*REPEAF
Trigger: GAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGA...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLVRMPV*WASSRP
Trigger: AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCAC...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGAGTCGGCGCCAGATaGCCTGAGTTGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFRVGAR*PELRGL
Trigger: AAGGCCTCTCAACTCAGGCCATCTGGCGCCGACTCT...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp CCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGTTGGAACTGATGTCTCAGAGAACAGCAGGTaGCGGAACTTGAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PLGELQKPIWLDAVGTDVSENSR*RNLRVC
Trigger: GCACACTCTCAAGTTCCGCCACCTGCTGTTCTCTGA...GACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTTCAGAGAACAGCAGGTaGCGGAACTTGAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLSENSR*RNLRVC
Trigger: GCACACTCTCAAGTTCCGCCACCTGCTGTTCTCTGA...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACGVLPE*QVQLWA
Trigger: TGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCC...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKEAPGS*DLIHPK
Trigger: CTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTC...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAGTGTCAGCTCCAGGATaGGCAGTGGTGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKVSAPG*AVVRTG
Trigger: ACCTGTTCTCACCACTGCCCATCCTGGAGCTGACAC...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAGTGTCAGCTCCAGGATaGGCAGTGGTGAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASVSAPG*AVVRTG
Trigger: ACCTGTTCTCACCACTGCCCATCCTGGAGCTGACAC...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCTCCCGCTGGCTTGGGTaGTCAACACGAATAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASSRWLG*STRIER
Trigger: CCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGA...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCGTTGTCCCGCTGGCTTaGGTGGTCAACACGAATAGA +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSVVPLA*VVNTNR
Trigger: TCTATTCGTGTTGACCACCCAAGCCAGCGGGACAAC...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACAAACCTCAGTTCACCCTGACGGGATTTAGCCAGGCCCTGGGACCCTTCATTTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: DKPQFTLTGFSQALGPFISSPIM*LGGPAF
Trigger: GAATGCAGGGCCCCCTAGCCACATAATAGGCGATGA...AATGAAGGGTCCCAGGGCCTGGCTAAATCCCGTCAGGGTGAACTGAGGTTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCTCCAGGCAGTTTTCTaGTATCTCCTCATCGCCTAT +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPLQAVF*YLLIAY
Trigger: ATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRTSPKS*GEAKVA
Trigger: TGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGT...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGGCGAGATTCATGTCATaGAAGCTCAGTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GQPMLQPLQADGTEHETVARFMS*KLSLFR
Trigger: CCTGAAAAGACTGAGCTTCCATGACATGAATCTCGC...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACG +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQRQKLG*ALLKQT
Trigger: CGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCT...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACG +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEERQKLG*ALLKQT
Trigger: CGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCT...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGGCTGTGACTGCATCCTaGTCCAGCCAGTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRAVTAS*SSQFWK
Trigger: CTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGC...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCGCTGTGACTGCATCCTaGTCCAGCCAGTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPAVTAS*SSQFWK
Trigger: CTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGC...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAGCTGTGACTGCATCCTaGTCCAGCCAGTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGAVTAS*SSQFWK
Trigger: CTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGC...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCGATAGAACTGGTGGTTaGGGTTCTGGGCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASDRTGG*GSGQPM
Trigger: CATGGGCTGCCCAGAACCCCAACCACCAGTTCTATC...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCGATAGAACTGGTGGTTaGGGTTCTGGGCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLDRTGG*GSGQPM
Trigger: CATGGGCTGCCCAGAACCCCAACCACCAGTTCTATC...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGAATGCCTGTTTGCTaGGCCTCATCAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPRMPVC*ASSRPP
Trigger: TGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
3UTR CAA 72 bp CCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PKDYKPSCENAC*LGLIKASRTSV
Trigger: CACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR CAA 72 bp TCTGTAGTGACTTCAGCTGTGCCTTCTGTCCCTAGGTaGCACTGCCGACGTTGTGTCAACAGCCGTCAGATC +
Preference number: 4 (lower is better)
Translates to: SVVTSAVPSVPR*HCRRCVNSRQI
Trigger: GATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTAGGGACAGAAGGCACAGCTGAAGTCACTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
3UTR CAA 72 bp GAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGAGTaGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: EQDVERHFSLGE*KELFILDEASL
Trigger: GAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCGCTCTACATCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGAGGTAGGATGCTTTaGAGTATTGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASRGRML*SIGPGR
Trigger: CCTCCCAGGCCCAATACTTCAAAGCATCCTACCTCT...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGTTGAGAGGCCTTTCTTaGGGGCAGTTTCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEELRGLS*GQFPQS
Trigger: GGATTGAGGAAACTGCCCTCAAGAAAGGCCTCTCAA...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAAGAGGTGAGAACCGCTaGTCACAAAGACGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASRGENR*SQRRLS
Trigger: TGACAGGCGTCTTTGTGATCAGCGGTTCTCACCTCT...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCTGGTGCCCGTTTGTATaGGGATGTAGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCWCPFV*GCRRRG
Trigger: GCCTCTTCTTCTACATCCTCATACAAACGGGCACCA...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCCAGGCAGCTGGGATCTaGTCCATCCAAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFQAAGI*SIQSST
Trigger: TGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTG...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTTGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLWRVEL*IAPRWR
Trigger: TCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCA...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAATGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQWRVEL*IAPRWR
Trigger: TCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCA...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCTGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPWRVEL*IAPRWR
Trigger: TCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCA...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCC +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFHCRRV*GSPVTP
Trigger: GGGTGTCACTGGAGAGCCTCACACTCTCCTACAATG...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCC +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQHCRRV*GSPVTP
Trigger: GGGTGTCACTGGAGAGCCTCACACTCTCCTACAATG...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASKSTSL*QSARFM
Trigger: CATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTT...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGAACTGATGTCCAGCTaGCAGAGAGAGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQELMSS*QREEDE
Trigger: TTCATCCTCCTCTCTCTGTCAGCTGGACATCAGTTC...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAGAACTGATGTCCAGCTaGCAGAGAGAGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGELMSS*QREEDE
Trigger: TTCATCCTCCTCTCTCTGTCAGCTGGACATCAGTTC...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGGGGTTCCCAGGATACTaGGTAAGGGGCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQGFPGY*VRGPKT
Trigger: AGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCC...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAGGTATGAAAGGGTTTaGGGCCTGAGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLRYERV*GLRAVW
Trigger: CCACACTGCTCTCAGGCCTCAAACCCTTTCATACCT...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAAGGTATGAAAGGGTTTaGGGCCTGAGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASRYERV*GLRAVW
Trigger: CCACACTGCTCTCAGGCCTCAAACCCTTTCATACCT...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCAGCCCTGCTGGTTCCTaGAGCCCCAGCACAGAAATA +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSSPAGS*SPSTEI
Trigger: TATTTCTGTGCTGGGGCTTCAGGAACCAGCAGGGCT...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCGCGGACCGCCATCTTaGAAAGGTCAGCAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSRGPPS*KGQQLG
Trigger: TCCTAACTGCTGACCTTTTCAAGATGGCGGTCCGCG...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTCCACAGGGCCCTGTTaGATTTTGTTCTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLSTGPC*ILFSGR
Trigger: TCTCCCAGAGAACAAAATTCAACAGGGCCCTGTGGA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp GAAAGTAGCCTGGGTGGGCAGACTATTCATGTCATGTTCTCAGGAGACAGACTGCAGCTGTGTGGTGGATaGGGAGCAGGATGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: ESSLGGQTIHVMFSGDRLQLCGG*GAGCRA
Trigger: CGCTCTACATCCTGCTCCTCATCCACCACACAGCTG...CAGTCTGTCTCCTGAGAACATGACATGAATAGTCTGCCCACCCAGGCTACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAAAGCGCTGTATCTTTTaGCATTCCCCACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKKRCIF*HSPPPL
Trigger: AAGAGGAGGTGGGGAATGTCAAAAGATACAGCGCTT...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGCTCCAAGGTGGAGATaGTGCGGAATCTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRAPRWR*CGIFVK
Trigger: CTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAATCCCATCTCCAACTaGTCCAGGCAGTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPNPISN*SRQFSG
Trigger: ACCAGAAAACTGCCTGGAGCAGTTGGAGATGGGATT...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CACCTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAAATCCCATCTCCAACTaGTCCAGGCAGTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HLHPRTGDKGIPTQLWLANPISN*SRQFSG
Trigger: ACCAGAAAACTGCCTGGAGCAGTTGGAGATGGGATT...TGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASVRMPV*WASSRP
Trigger: AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCAC...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACTGTGCTTAGACCACTaGACTCCAGCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKLCLDH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAGTGGTCTAAGCACAG...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp CAGAGAGAGGAGGATGAATCCTCTGAGAAAACATCTGCCAAGGCCAGCAGGCCACAGAGTGTGATGGTGTaGACCTGTGGTCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: QREEDESSEKTSAKASRPQSVMV*TCGHSY
Trigger: GTAGCTGTGACCACAGGTGCACACCATCACACTCTG...TGGCCTGCTGGCCTTGGCAGATGTTTTCTCAGAGGATTCATCCTCCTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTAGAGTCGGCGCCAGATaGCCTGAGTTGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPRVGAR*PELRGL
Trigger: AAGGCCTCTCAACTCAGGCCATCTGGCGCCGACTCT...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACCAGAAGACACATCAATaGTCCCACGTAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDQKTHQ*SHVEHG
Trigger: CCCATGTTCTACGTGGGACCATTGATGTGTCTTCTG...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAGAGAACAGCAGGTaGCGGAACTTGAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASSENSR*RNLRVC
Trigger: GCACACTCTCAAGTTCCGCCACCTGCTGTTCTCTGA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNHSYAG*PSGLQH
Trigger: GTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCACTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGC +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPLWASA*LHSYAG
Trigger: GCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAG...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNGVLPE*QVQLWA
Trigger: TGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCC...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCTCATGGGAGGTGGCTaGGGGGTGCAGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNLMGGG*GVQLPL
Trigger: AAGAGGGAGCTGCACCCCCCAGCCACCTCCCATGAG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCAGAAGGTGACCGCTTaGTGCCAGGAGCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACQKVTA*CQEPHG
Trigger: CCCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCGTTGTCCCGCTGGCTTaGGTGGTCAACACGAATAGA +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASVVPLA*VVNTNR
Trigger: TCTATTCGTGTTGACCACCCAAGCCAGCGGGACAAC...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCGTTGTCCCGCTGGCTTaGGTGGTCAACACGAATAGA +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLVVPLA*VVNTNR
Trigger: TCTATTCGTGTTGACCACCCAAGCCAGCGGGACAAC...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASSSPIM*LGGPAF
Trigger: GAATGCAGGGCCCCCTAGCCACATAATAGGCGATGA...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACCTCCAGGCAGTTTTCTaGTATCTCCTCATCGCCTAT +
Preference number: 4 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDLQAVF*YLLIAY
Trigger: ATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAG...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGATGGCTGGGCTCCCCGTaGAAATCCCATCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: PSSSFPMRPSAFMLESSRWLGSP*KSHLQL
Trigger: CAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCA...TCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLTSPKS*GEAKVA
Trigger: TGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGT...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGCGAGATTCATGTCATaGAAGCTCAGTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPARFMS*KLSLFR
Trigger: CCTGAAAAGACTGAGCTTCCATGACATGAATCTCGC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACG +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKRQKLG*ALLKQT
Trigger: CGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCT...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAGCTGTGACTGCATCCTaGTCCAGCCAGTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASAVTAS*SSQFWK
Trigger: CTTCCAAAACTGGCTGGACCAGGATGCAGTCACAGC...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCGATAGAACTGGTGGTTaGGGTTCTGGGCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSDRTGG*GSGQPM
Trigger: CATGGGCTGCCCAGAACCCCAACCACCAGTTCTATC...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp CTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACACTCAGTTGGAAGCTaGAATTTCAGGGGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LHPRTGDKGIPTQLWLAEHSVGS*NFRGKG
Trigger: ACCCTTGCCCCTGAAATTCCAGCTTCCAACTGAGTG...TTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp TGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAACTCCCACGTTCCCAGTaGAGAGGTCTTTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: CENACLLGLIKASRTSVQLPRSQ*RGLCLY
Trigger: ATAAAGGCAAAGACCTCTCCACTGGGAACGTGGGAG...TTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCGACACACATGACAGGTaGGGAAGTGCCCTAACCATT +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCDTHDR*GSALTI
Trigger: AATGGTTAGGGCACTTCCCCACCTGTCATGTGTGTC...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCGGCGCCAGATGGCCTaGGTTGAGAGGCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNRRQMA*VERPFL
Trigger: CAAGAAAGGCCTCTCAACTCAGGCCATCTGGCGCCG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCAGAGGTGAGAACCGCTaGTCACAAAGACGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSRGENR*SQRRLS
Trigger: TGACAGGCGTCTTTGTGATCAGCGGTTCTCACCTCT...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGGCTGTGCAGAAGAGGTaGGAACCGCTGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQAVQKR*EPLITK
Trigger: CTTTGTGATCAGCGGTTCTCACCTCTTCTGCACAGC...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCAGGCAGCTGGGATCTaGTCCATCCAAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPQAAGI*SIQSST
Trigger: TGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTG...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASWRVEL*IAPRWR
Trigger: TCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSKSTSL*QSARFM
Trigger: CATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTT...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp ATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATTTCCTATGAGAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: MNQRGARVSSPILIISYEKSTSL*QSARFM
Trigger: CATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTT...CTCATAGGAAATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCGAACTGATGTCCAGCTaGCAGAGAGAGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASELMSS*QREEDE
Trigger: TTCATCCTCCTCTCTCTGTCAGCTGGACATCAGTTC...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGTTTCAGGGGCAAGGGTaGGATCATCCCACAAAACAA +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEFQGQG*DHPTKQ
Trigger: TTGTTTTGTGGGATGATCTCACCCTTGCCCCTGAAA...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGAAAATGGACCTCAGCTaGGTAGAGATAATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QPMLQPLQADGTEHETVRKMDLS*VEIMFW
Trigger: CCAGAACATTATCTCTACTCAGCTGAGGTCCATTTT...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCAAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACA +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPSHQLG*TLQHVT
Trigger: TGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCT...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATTCCCTGGCTGTGACTaGATCCTGGTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPFPGCD*ILVQPV
Trigger: AACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAA...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCGTGAGAATGCCTGTTTaGTGGGCCTCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSVRMPV*WASSRP
Trigger: AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCAC...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp CACCTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCATATTATGCCGCTTTCTaGCCCTGTACCTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: HLHPRTGDKGIPTQLWLAYYAAF*PCTFVM
Trigger: CATGACAAAGGTACAGGGGCAGAAAGCGGCATAATA...TGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAATCAGCTCCCTGCTTTaGCTCCTACATTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASISSLL*LLHFSH
Trigger: GTGGCTGAAATGTAGGAGGCAAAGCAGGGAGCTGAT...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTGCTACCCCTAACCTCTaGCTGCGGCTGGTAGTACAT +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPATPNL*LRLVVH
Trigger: ATGTACTACCAGCCGCAGGCAGAGGTTAGGGGTAGC...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCCTTCTGTCCCTAGGTTaGACTGCCGACGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFLLSLG*TADVVS
Trigger: TGACACAACGTCGGCAGTGCAACCTAGGGACAGAAG...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTCAGAAGACACATCAATaGTCCCACGTAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLQKTHQ*SHVEHG
Trigger: CCCATGTTCTACGTGGGACCATTGATGTGTCTTCTG...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCGTTGTCCCGCTGGCTTaGGTGGTCAACACGAATAGA +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFVVPLA*VVNTNR
Trigger: TCTATTCGTGTTGACCACCCAAGCCAGCGGGACAAC...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGCTCCAGGCAGTTTTCTaGTATCTCCTCATCGCCTAT +
Preference number: 4 (lower is better)
Translates to: SREEAPYTSLKPGCLLEELQAVF*YLLIAY
Trigger: ATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAG...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp CTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTTGACTCTCAGGGGGAGAGGCAAAGGTaGCACTATCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: LQKGSVGLVICDEVLDSQGERQR*HYPGTA
Trigger: AGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCC...CTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp CACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAGATGCTTTGAAGTATTaGGCCTGGGAGGGCTACAAA +
Preference number: 4 (lower is better)
Translates to: HPRTGDKGIPTQLWLAEPDALKY*AWEGYK
Trigger: TTTGTAGCCCTCCCAGGCCCAATACTTCAAAGCATC...TGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp GAAAGTAGCCTGGGTGGGCAGACTATTCATGTCATGTTCTCAGGAGACAGACTGACTGCACTTCAGACCTaGCAGGGTGGAACCACTGCA +
Preference number: 4 (lower is better)
Translates to: ESSLGGQTIHVMFSGDRLTALQT*QGGTTA
Trigger: TGCAGTGGTTCCACCCTGCCAGGTCTGAAGTGCAGT...CAGTCTGTCTCCTGAGAACATGACATGAATAGTCTGCCCACCCAGGCTACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCAGGAGCTGTTTATCCTaGATGAAGCTAGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSRSCLS*MKLASV
Trigger: CACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCT...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTAGAGGTAGGATGCTTTaGAGTATTGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPRGRML*SIGPGR
Trigger: CCTCCCAGGCCCAATACTTCAAAGCATCCTACCTCT...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACGCATGTTACAGATGGTaGGCTGTCGGACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNACYRW*AVGHGG
Trigger: CCCGCCATGTCCGACAGCTCACCATCTGTAACATGC...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCCTAGGTTGTACTCTTTaGGTGTTTGCAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: PYTSLKPGCLLEEGRQEPLGCTL*VFAKQA
Trigger: GGCTTGTTTTGCAAACACTCAAAGAGTACAACCTAG...GGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAAGAATAAAGGTATaGAAGGGTTTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPKRIKV*KGLRPE
Trigger: CTCAGGCCTCAAACCCTTTCATACCTTTATTCTTTT...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGGTAGACTTCTCATTTaGCAAATGGAACCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPGRLLI*QMEPLE
Trigger: TTCTAGAGGTTCCATTTGTCAAATGAGAAGTCTACC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTAACTCTAGCCCTGCCTaGGCATGCATATACTATACT +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLNSSPA*ACIYYT
Trigger: AGTATAGTATATGCATGCTCAGGCAGGGCTAGAGTT...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATCTCTCTGGGCGAGTTaGAGGAGCTGTTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPSLWAS*RSCLSW
Trigger: CCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGA...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCCTGGGATGAGTCCATaGGTCGCTAACCACATGGCA +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACPGMSP*VANHMA
Trigger: TGCCATGTGGTTAGCGACTCATGGACTCATCCCAGG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617760.4
CDS-3UTR GCA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCGCTCCAAGGTGGAGATaGTGCGGAATCTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFAPRWR*CGIFVK
Trigger: CTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGC...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTCCCTGGCTGTGACTaGATCCTGGTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACFPGCD*ILVQPV
Trigger: AACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAA...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTCACCTGCCCTTGGACTaGCTTCCATATCTAAAATGT +
Preference number: 4 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLHLPLD*LPYLKC
Trigger: ACATTTTAGATATGGAAGGCAGTCCAAGGGCAGGTG...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACAGAGTCGGCGCCAGATaGCCTGAGTTGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNRVGAR*PELRGL
Trigger: AAGGCCTCTCAACTCAGGCCATCTGGCGCCGACTCT...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCCAGAAGACACATCAATaGTCCCACGTAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLQKTHQ*SHVEHG
Trigger: CCCATGTTCTACGTGGGACCATTGATGTGTCTTCTG...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCCCTTCATCTCGGGATaGGGCCCGGCCTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSPFISG*GPASGG
Trigger: GCCTCCCGAGGCCGGGCCCCATCCCGAGATGAAGGG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNLWASA*LHSYAG
Trigger: GCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACTGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNWQVQL*ASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCA...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACTCCAGGCAGTTTTCTaGTATCTCCTCATCGCCTAT +
Preference number: 4 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKLQAVF*YLLIAY
Trigger: ATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAG...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCGTAATCCCAGCACTTTaGGAGGCTAAGAGGATCGCT +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSVIPAL*EAKRIA
Trigger: AGCGATCCTCTTAGCCTCCCAAAGTGCTGGGATTAC...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTGCTTATTTAGGAGCTaGTCAGTTCACTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLCLFRS*SVHFCP
Trigger: TGGGCAGAAGTGAACTGACCAGCTCCTAAATAAGCA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATCTTCCGCCTTCATGTTaGAGTCCTCCAGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRIHEPAWSQGVFSHPHHLPPSC*SPPERK
Trigger: CTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAG...ATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp GCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGATTCATGAACCAGCGTaGAGCCAGGGTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AFMLESSRKEVLVWSYVTIHEPA*SQGVFS
Trigger: GGAGAAGACACCCTGGCTCCACGCTGGTTCATGAAT...CGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATTGAGAGGCCTTTCTTaGGGGCAGTTTCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPLRGLS*GQFPQS
Trigger: GGATTGAGGAAACTGCCCTCAAGAAAGGCCTCTCAA...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTTGGTGCCCGTTTGTATaGGGATGTAGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPWCPFV*GCRRRG
Trigger: GCCTCTTCTTCTACATCCTCATACAAACGGGCACCA...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR TCA 90 bp GAAAGTAGCCTGGGTGGGCAGACTATTCATGTCATGTTCTCAGGAGACAGACTGTGGTGCCCGTTTGTATaGGGATGTAGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ESSLGGQTIHVMFSGDRLWCPFV*GCRRRG
Trigger: GCCTCTTCTTCTACATCCTCATACAAACGGGCACCA...CAGTCTGTCTCCTGAGAACATGACATGAATAGTCTGCCCACCCAGGCTACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTTCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSSAPGP*RVRAPF
Trigger: GAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGA...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGTTGGAACTGATGTCCTAGGTTGTACTCTTTaGGTGTTTGCAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: PLGELQKPIWLDAVGTDVLGCTL*VFAKQA
Trigger: GGCTTGTTTTGCAAACACTCAAAGAGTACAACCTAG...GACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCTAGGTTGTACTCTTTaGGTGTTTGCAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRLGCTL*VFAKQA
Trigger: GGCTTGTTTTGCAAACACTCAAAGAGTACAACCTAG...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp GTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCTGGCTTCCCTGGCTGTaGCTGCATCCTGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VEFCSLGENHQEGLHDVCWLPWL*LHPGPA
Trigger: GGCTGGACCAGGATGCAGTCACAGCCAGGGAAGCCA...GCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTAGGTATGAAAGGGTTTaGGGCCTGAGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACRYERV*GLRAVW
Trigger: CCACACTGCTCTCAGGCCTCAAACCCTTTCATACCT...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGGGCACAAGAATCACTTaGACTCAGGAGGTAGAGACT +
Preference number: 4 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQGTRIT*TQEVET
Trigger: AGTCTCTACCTCCTGAGTTCAAGTGATTCTTGTGCC...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR TCA 90 bp TGTAGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCCTCATCATTTCCTATaGGACCTTCCGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: CRRIHEPAWSQGVFSHPHPHHFL*DLPPSC
Trigger: ACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGG...ATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTACTTGGGTGTGGTATaGCTAAGGGGATGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRYLGVV*LRGCFL
Trigger: TAAGAAACATCCCCTTAGTCATACCACACCCAAGTA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGATCAAGAAGGGCTGCATaGTGTTTGCCCAAAATTTAT +
Preference number: 4 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGSRRAA*CLPKIY
Trigger: ATAAATTTTGGGCAAACATCATGCAGCCCTTCTTGA...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR TCA 90 bp GAAAGTAGCCTGGGTGGGCAGACTATTCATGTCATGTTCTCAGGAGACAGACTGCTTGGTGCAGAAATCTaGAGCTGCAGCAGACAAACC +
Preference number: 4 (lower is better)
Translates to: ESSLGGQTIHVMFSGDRLLGAEI*SCSRQT
Trigger: GGTTTGTCTGCTGCAGCTTCAGATTTCTGCACCAAG...CAGTCTGTCTCCTGAGAACATGACATGAATAGTCTGCCCACCCAGGCTACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR GCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTGCTCCAAGGTGGAGATaGTGCGGAATCTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPAPRWR*CGIFVK
Trigger: CTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGC...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGAATGTCCTTTGTCATaGTGTTCTAATAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPECPLS*CSNRNV
Trigger: GACATTCCTATTAGAACAGCATGACAAAGGACATTC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTTCCAGAACCCCCATATaGGCGCTCACCGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSSRTPI*ALTARP
Trigger: CGGGCGGGCGGTGAGCGCCCATATGGGGGTTCTGGA...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTCACACTTTCCAAACTaGAAGGCCTTGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRSHFPN*KALSSS
Trigger: TGATGAAGACAAGGCCTTCCAGTTTGGAAAGTGTGA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCTCACACTTTCCAAACTaGAAGGCCTTGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCSHFPN*KALSSS
Trigger: TGATGAAGACAAGGCCTTCCAGTTTGGAAAGTGTGA...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCTCACACTTTCCAAACTaGAAGGCCTTGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPSHFPN*KALSSS
Trigger: TGATGAAGACAAGGCCTTCCAGTTTGGAAAGTGTGA...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPQELSR*HSVRAA
Trigger: GGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTG...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCGCGAGATTCATGTCATaGAAGCTCAGTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: DYKPSCENACLLGLIKASARFMS*KLSLFR
Trigger: CCTGAAAAGACTGAGCTTCCATGACATGAATCTCGC...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
3UTR CAA 72 bp TCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTaGGTCTGGTCATATGTGACGAGGTACTTGACTCTC +
Preference number: 4 (lower is better)
Translates to: SAFMLESSRKEV*VWSYVTRYLTL
Trigger: GAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACAGAGGTAGGATGCTTTaGAGTATTGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNRGRML*SIGPGR
Trigger: CCTCCCAGGCCCAATACTTCAAAGCATCCTACCTCT...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCCAGATGGCCTGAGTTaGGAGGCCTTTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPPDGLS*EAFLEG
Trigger: GCCCTCAAGAAAGGCCTCTCAACTCAGGCCATCTGG...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCAGCCCCATGGTGAATaGGCTGATGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPQPHGE*ADATAA
Trigger: GGCAGCTGTTGCATCAGCTCATTCACCATGGGGCTG...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACGCTGCGGAATCTTTGTaGAGCTTCCAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNAAESL*SFQCWK
Trigger: CTTCCAGCACTGGAAGCTTCACAAAGATTCCGCAGC...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCAAAAGAATAAAGGTATaGAAGGGTTTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSKRIKV*KGLRPE
Trigger: CTCAGGCCTCAAACCCTTTCATACCTTTATTCTTTT...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAAAAGAATAAAGGTATaGAAGGGTTTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGKRIKV*KGLRPE
Trigger: CTCAGGCCTCAAACCCTTTCATACCTTTATTCTTTT...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR TCA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCTTTGCCTTTATCCAGTaGGTTTTTAGGTCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: KGPKDYKPSCENACLLGLFAFIQ*VFRSKA
Trigger: GGCCTTTGACCTAAAAACTCACTGGATAAAGGCAAA...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACAGCACCCTTCTTCCCTaGAGCTCGCTTGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNSTLLP*SSLETL
Trigger: AAGCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCT...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGATCATCAAGAAGGGCTaGATGATGTTTGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRIIKKG*MMFAQN
Trigger: ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGAT...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCCAGAACCCTGCGGTTaGGCTCAGCCACCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSPEPCG*AQPPAR
Trigger: CCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp ATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ISYETFRLHVGVLQKGSVTSPKS*GEAKVA
Trigger: TGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGT...AACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp ATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACG +
Preference number: 4 (lower is better)
Translates to: ILIISYETFRLHVGVLQKRQKLG*ALLKQT
Trigger: CGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCT...TTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTGCAGGTGGCGGAACTTaGGAGTGTGCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSAGGGT*ECAGSW
Trigger: CCAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGC...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACTGGTGCCCGTTTGTATaGGGATGTAGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNWCPFV*GCRRRG
Trigger: GCCTCTTCTTCTACATCCTCATACAAACGGGCACCA...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCCTAGGTTGTACTCTTTaGGTGTTTGCAAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: LPSSSFPMRPSAFMLESSLGCTL*VFAKQA
Trigger: GGCTTGTTTTGCAAACACTCAAAGAGTACAACCTAG...GGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACTCCTCTCTAACCTCCTaGTCATACCCCCAATTTGCC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNSSLTS*SYPQFA
Trigger: GGCAAATTGGGGGTATGATCAGGAGGTTAGAGAGGA...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCAAGGTCTGTTCCGCCTaGTGTCAGGCTCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPKVCSA*CQALLC
Trigger: ACACAGGAGAGCCTGACAGCAGGCGGAACAGACCTT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp CTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTTGACTCTCAGAATCCCATCTCCAACTaGTCCAGGCAGTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LQKGSVGLVICDEVLDSQNPISN*SRQFSG
Trigger: ACCAGAAAACTGCCTGGAGCAGTTGGAGATGGGATT...CTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR GCA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGATACTCTTTGAGTGTTTaGAAAACAAGCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGYSLSV*KTSPKS
Trigger: GGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTA...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp CCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGTTGGAACTGATGTCTACTCTTTGAGTGTTTaGAAAACAAGCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: PLGELQKPIWLDAVGTDVYSLSV*KTSPKS
Trigger: GGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTA...GACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTACTCTTTGAGTGTTTaGAAAACAAGCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLYSLSV*KTSPKS
Trigger: GGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCAGTGGAGAGGTCTTTaGCTTTATCCAGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSQWRGL*LYPVSF
Trigger: AAAACTCACTGGATAAAGGCAAAGACCTCTCCACTG...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR GCA 90 bp ATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACATCAGAGAGGAGCCCTaGCTTGTCTTTGGGAGTATA +
Preference number: 4 (lower is better)
Translates to: MLESSRKEVLVWSYVTRYIREEP*LVFGSI
Trigger: TATACTCCCAAAGACAAGGCAGGGCTCCTCTCTGAT...GTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCGATGCTTTGAAGTATTaGGCCTGGGAGGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPDALKY*AWEGPH
Trigger: GTGTGGGCCCTCCCAGGCCCAATACTTCAAAGCATC...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCAGAAGACACATCAATaGTCCCACGTAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: RILSKGPKDYKPSCENACQKTHQ*SHVEHG
Trigger: CCCATGTTCTACGTGGGACCATTGATGTGTCTTCTG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CCA 90 bp TTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGCTCCAGGCAGTTTTCTaGTATCTCCTCATCGCCTAT +
Preference number: 4 (lower is better)
Translates to: FMLESSRKEVLVWSYVTRLQAVF*YLLIAY
Trigger: ATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAG...CCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCATAGAGGGAGGTGGTaGTGGCAGTTTTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNHRGRW*WQFLME
Trigger: CTCCATCAAAAACTGCCACCACCACCTCCCTCTATG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCTTAGGCTGTGGGGCTaGGCTAGCTGGTGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSLRLWG*ASWCPF
Trigger: AAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCAGCTCGGTTGCACCCTaGAGCATGTTACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPSSVAP*SMLQMV
Trigger: CACCATCTGTAACATGCTGCAGGGTGCAACCGAGCT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTTCAGGCTCTCCTGTGTaGTCCGGCGTGTTACCCGAG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSSGSPV*SGVLPE
Trigger: CTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGA...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCAGGTCTTCAGACTCTaGACCAGGCCCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSQVFRL*TRPLTG
Trigger: ACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATACTCTTTGAGTGTTTaGAAAACAAGCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: RGPKTINPAVRMPVCWASYSLSV*KTSPKS
Trigger: GGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR GCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACATGCATATACTATACTaGTCCCACCTGCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNMHILY*SHLPLD
Trigger: GTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCAT...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTTTGAAGTATTGGGCCTaGGAGGGCCCACACCCCGCT +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSLKYWA*EGPHPA
Trigger: AGCGGGGTGTGGGCCCTCCCAGGCCCAATACTTCAA...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp GTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCGATGCTTTGAAGTATTaGGCCTGGGAGGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: VEFCSLGENHQEGLHDVCDALKY*AWEGPH
Trigger: GTGTGGGCCCTCCCAGGCCCAATACTTCAAAGCATC...GCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CCA 90 bp GAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTTGACTGCGAGATTCATGTCATaGAAGCTCAGTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ESSRKEVLVWSYVTRYLTARFMS*KLSLFR
Trigger: CCTGAAAAGACTGAGCTTCCATGACATGAATCTCGC...AGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CCA 90 bp TCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGAAGGAAGTGTTGGTCTaGTCATATGTGACGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SSSFPMRPSAFMLESSRKKEVLV*SYVTRY
Trigger: GTACCTCGTCACATATGACCAGACCAACACTTCCTT...CTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTAAAAGAATAAAGGTATaGAAGGGTTTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KTINPAVRMPVCWASSRPKRIKV*KGLRPE
Trigger: CTCAGGCCTCAAACCCTTTCATACCTTTATTCTTTT...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR GCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCGCTCCAAGGTGGAGATaGTGCGGAATCTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPAPRWR*CGIFVK
Trigger: CTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGC...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp GAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTTGACTCCATCCAGAATGATCTaGTTGAGTATTTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ESSRKEVLVWSYVTRYLTPSRMI*LSISAW
Trigger: CCAAGCTGAAATACTCAAGCAGATCATTCTGGATGG...AGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCAGGCAGCTGGGATCTaGTCCATCCAAAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSQAAGI*SIQSST
Trigger: TGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCC +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSHCRRV*GSPVTP
Trigger: GGGTGTCACTGGAGAGCCTCACACTCTCCTACAATG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCAGTCTCCCCTGCTATaGGGCATACAAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSQSPLL*GIQAFL
Trigger: GAGGAAGGCTTGTATGCCTCATAGCAGGGGAGACTG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACTTAAAATATGACTGGTaGGGTGGTGAGGTCAAACTC +
Preference number: 4 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNLKYDW*GGEVKL
Trigger: GAGTTTGACCTCACCACCTCACCAGTCATATTTTAA...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCATTGCTAGGTTATCCTaGGGAAGTCACTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPIARLS*GSHLPS
Trigger: TGAGGGCAAGTGACTTCCTCAGGATAACCTAGCAAT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACA +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSSHQLG*TLQHVT
Trigger: TGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCT...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCAATGACAGTCTCCCCTaGTATGAGGCATACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPNDSLP*YEAYKP
Trigger: AGGCTTGTATGCCTCATAGCAGGGGAGACTGTCATT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCAGAAGACACATCAATaGTCCCACGTAGAACATGGG +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPQKTHQ*SHVEHG
Trigger: CCCATGTTCTACGTGGGACCATTGATGTGTCTTCTG...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSEAPGS*DLIHPK
Trigger: CTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTC...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCTGCAGTCTGGTTGCCTaGGTTTTGAATCCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPCSLVA*VLNPSS
Trigger: AGAGCTAGGATTCAAAACCCAGGCAACCAGACTGCA...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTGCTGTGCAGAAGAGGTaGGAACCGCTGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSAVQKR*EPLITK
Trigger: CTTTGTGATCAGCGGTTCTCACCTCTTCTGCACAGC...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR GCA 90 bp TTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTCTTTGAGTGTTTaGAAAACAAGCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: FMLESSRKEVLVWSYVTRYSLSV*KTSPKS
Trigger: GGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTA...CCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR GCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTATCATACCCCCAATTTaGCCCTCCCACCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSIIPPI*PSHLPR
Trigger: TCTAGGGAGGTGGGAGGGGCAAATTGGGGGTATGAT...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTTTGAGAGGCCTTTCTTaGGGGCAGTTTCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSLRGLS*GQFPQS
Trigger: GGATTGAGGAAACTGCCCTCAAGAAAGGCCTCTCAA...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCTCACACTTTCCAAACTaGAAGGCCTTGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPSHFPN*KALSSS
Trigger: TGATGAAGACAAGGCCTTCCAGTTTGGAAAGTGTGA...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTTGGCATAGAGGGAGGTaGTGGTGGCAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSWHRGR*WWQFLM
Trigger: CATCAAAAACTGCCACCACCACCTCCCTCTATGCCA...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR TCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCAGTAGCATAGTTGTTTaGAAGCATGAATCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPSSIVV*KHESAV
Trigger: GACTGCAGATTCATGCTTTCAAACAACTATGCTACT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CCA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCAACAGTTTATTAATATaGCATAGAGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPNSLLI*HRGRWW
Trigger: CCACCACCTCCCTCTATGCCATATTAATAAACTGTT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS CCA 90 bp AGAACCAGCAACTCCGGGCGCGCCAGGCCTCGGGCGCCGCCATCTTaGGGAGGTGCGCGAGCCCGAGAGTGTCGCCCGCGGACCGCCATC +
Preference number: 5 (lower is better)
Translates to: RTSNSGRARPRAPPS*GGARARECRPRTAI
Trigger: GATGGCGGTCCGCGGGCGACACTCTCGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCGAGGCCTGGCGCGCCCGGAGTTGCTGGTTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS GCA 90 bp GCTCTTCGCTGGCGCCGCCTCCCGGGACGTGGCCTCCATGGTCGTTaGCGCCGCTACCTCACAGAACCAGCAACTCCGGGCGCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: ALRWRRLPGRGLHGR*RRYLTEPATPGAPG
Trigger: GCCTGGCGCGCCCGGAGTTGCTGGTTCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCCGGGAGGCGGCGCCAGCGAAGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS GCA 90 bp CAACTCCGGGCGCGCCAGGCCTCGGGCGCCGCCATCTTGGGGAGGTaGGCGAGCCCGAGAGTGTCGCCCGCGGACCGCCATCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: QLRARQASGAAILGR*ASPRVSPADRHLEK
Trigger: CTTTTCAAGATGGCGGTCCGCGGGCGACACTCTCGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCGAGGCCTGGCGCGCCCGGAGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS CCA 90 bp AGGCCGAGCTCTTCGCTGGCGCCGCCTCCCGGGACGTGGCCTCCATaGTCGTTGCCGCCGCTACCTCACAGAACCAGCAACTCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: RPSSSLAPPPGTWPP*SLPPLPHRTSNSGR
Trigger: GCGCCCGGAGTTGCTGGTTCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS GCA 90 bp CGTGTCAGCTCCAGGATGGGCAGTGGTGAGAACAGGTCACTGAGATaGAGGGCACGGAGGCGACATCCAGCCTGGCCTGACAGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RVSSRMGSGENRSLR*RARRRHPAWPDRAR
Trigger: GCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCACCACTGCCCATCCTGGAGCTGACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp CAGGTGCAGCTCTGGGCATCTGCTTGGCTTCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCACATCGCTCAGCAGCATCCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: QVQLWASAWLHSYAG*PSGLQHIAQQHPGG
Trigger: CCCGCCGGGATGCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp GGCCCTGCATTCCCTGGCACACCAGGGTTGTCCCGCTGGCTTGGGTaGTCAACACGAATAGAGAGGACCCGTAGCAGGGGCAGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: GPAFPGTPGLSRWLG*STRIERTRSRGSAR
Trigger: GCGAGCACTGCCCCTGCTACGGGTCCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp TGGCTAGGGGGCCCTGCATTCCCTGGCACACCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGAATAGAGAGGACCCGTAGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: WLGGPAFPGTPGLSR*LGWSTRIERTRSRG
Trigger: GCCCCTGCTACGGGTCCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGATCGGGCGCCGCCATCTaGGGGAGGTGCGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGSGAAI*GRCASP
Trigger: CGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCGA...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CAA 90 bp CGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGCCACCAGCTCGGTaGCACCCTGCAGCATGTTAC +
Preference number: 5 (lower is better)
Translates to: RPQRSSRLANSRSPSGLMQPPAR*HPAACY
Trigger: GTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTG...CATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGCCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMPGTPG*SRWLGW
Trigger: CCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGG...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS GCA 90 bp TGTCAGGCTCTCCTGTGTGCTCCGGCGTGTTACCCGAGTGGCAGGTaGAGCTCTGGGCATCTGCTTGGCTTCACTCTTACGCCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: CQALLCAPACYPSGR*SSGHLLGFTLTPAG
Trigger: GCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp TCCGGCGTGTTACCCGAGTGGCAGGTGCAGCTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGCTGGCCATCAGGGCTGCAGCACATC +
Preference number: 5 (lower is better)
Translates to: SGVLPEWQVQLWASA*LHSYAGWPSGLQHI
Trigger: GATGTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp TCTCCTGTGTGCTCCGGCGTGTTACCCGAGTGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCACTCTTACGCCGGCTGGCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: SPVCSGVLPEWQVQL*ASAWLHSYAGWPSG
Trigger: CCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGAGCACACAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp CGCCTGCTGTCAGGCTCTCCTGTGTGCTCCGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCATCTGCTTGGCTTCACTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: RLLSGSPVCSGVLPE*QVQLWASAWLHSYA
Trigger: GGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGACAGCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGTCCAGAACCCTGCGGTaGGGCTCAGCCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GSGQPMLQPLQADGTEHESRTLR*GSATSS
Trigger: CGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGA...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTCCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPPGTPG*SRWLGW
Trigger: CCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGG...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 90 bp GGGGAGGTGCGCGAGCCCGAGAGTGTCGCCCGCGGACCGCCATCTTaGAAAGGTCAGCAGTTAGGACGGCTCCATAAGCGATATGGGGAA +
Preference number: 5 (lower is better)
Translates to: GEVREPESVARGPPS*KGQQLGRLHKRYGE
Trigger: TTCCCCATATCGCTTATGGAGCCGTCCTAACTGCTGACCTTTTCAAGATGGCGGTCCGCGGGCGACACTCTCGGGCTCGCGCACCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS GCA 90 bp TCCAGAACCCTGCGGTTGGGCTCAGCCACCAGCTCGGTTGCACCCTaGAGCATGTTACAGATGGTGAGCTGTCGGACATGGCGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SRTLRLGSATSSVAP*SMLQMVSCRTWREL
Trigger: CAGCTCCCGCCATGTCCGACAGCTCACCATCTGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS GCA 90 bp CAGGGTCTCCAGAACCCTGCGGTTGGGCTCAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACAGATGGTGAGCTGTCGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: QGLQNPAVGLSHQLG*TLQHVTDGELSDMA
Trigger: CGCCATGTCCGACAGCTCACCATCTGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 90 bp GAGAACAGGTCACTGAGATGCAGGGCACGGAGGCGACATCCAGCCTaGCCTGACAGGGCCCGCAGGCTGTCTAGCAGGCGGAAGATGTTA +
Preference number: 5 (lower is better)
Translates to: ENRSLRCRARRRHPA*PDRARRLSSRRKML
Trigger: TAACATCTTCCGCCTGCTAGACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAACCAGCCCTGCTGGTTTCCAGAACCCTGCGGTaGGGCTCAGCCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GDKGIPTQLWLAEPALLVSRTLR*GSATSS
Trigger: CGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGA...AACCAGCAGGGCTGGTTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGGCAGAAGGTGACCGCTaGGTGCCAGGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: GSGQPMLQPLQADGTEHEAEGDR*VPGASW
Trigger: CCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTGC...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGGACCTCAGTGCAAGGGACCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RMPVCWASSRPPGPQCKGPGTPG*SRWLGW
Trigger: CCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGG...TCCCTTGCACTGAGGTCCTGGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp CAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGAGGCAGCGCTCCAGCCGCTaGGCGAACTCCAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: QPMLQPLQADGTEHETVRQRSSR*ANSRSP
Trigger: TGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTG...CCTCACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp TCCACGGCCCCAGCGCTCCAGCCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: STAPALQPLGELQKPIWLCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...AAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTGGGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp CGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCAGCCTGGGTGCCTGCTaGAGGAGGGAAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RRCVNSRQIRPPPDGSDCSLGAC*RREGRN
Trigger: GTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCT...GCAGTCAGAACCATCAGGGGGTGGCCGGATCTGACGGCTGTTGACACAACGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS TCA 90 bp CAGTGCTCGCACGATAGCACGTGTCAGCTCCAGGATGGGCAGTGGTaGGAACAGGTCACTGAGATGCAGGGCACGGAGGCGACATCCAGC +
Preference number: 5 (lower is better)
Translates to: QCSHDSTCQLQDGQW*EQVTEMQGTEATSS
Trigger: GCTGGATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCACCACTGCCCATCCTGGAGCTGACACGTGCTATCGTGCGAGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp TCGGGAGGCCTCTCCACAGAGGCGGCAGGGTGGGCCACCAGGCCCTaGTTGCCAGAAGCCAGCACTCATGGTGAGAATAAGGATGAAAAG +
Preference number: 5 (lower is better)
Translates to: SGGLSTEAAGWATRP*LPEASTHGENKDEK
Trigger: CTTTTCATCCTTATTCTCACCATGAGTGCTGGCTTCTGGCAACCAGGGCCTGGTGGCCCACCCTGCCGCCTCTGTGGAGAGGCCTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 90 bp AGAGAACCCGAGGCCTTCAGAACGGAGCACAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCCATCTCCAACTGCTCCAGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: REPEAFRTEHSSGAG*APRGNPISNCSRQF
Trigger: AAACTGCCTGGAGCAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTTCTGAAGGCCTCGGGTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCTGGCCTCCATGGTCGTaGCCGCCGCTACCTCACAGA +
Preference number: 5 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPWPPWS*PPLPHR
Trigger: TCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCA...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CAA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGCAGCCACCAGCTCGGTaGCACCCTGCAGCATGTTAC +
Preference number: 5 (lower is better)
Translates to: GSGQPMLQPLQADGTEHEQPPAR*HPAACY
Trigger: GTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTG...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGTCCAGAACCCTGCGGTaGGGCTCAGCCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: DAASTAITFVFHQRSHEESRTLR*GSATSS
Trigger: CGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGA...CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGACCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGPGTPG*SRWLGW
Trigger: CCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGG...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AGGGGAGAACGCCTATCACCTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCAGCGCTCCAGCCGCTaGGCGAACTCCAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: RGERLSPPPKNRGQGYPNQRSSR*ANSRSP
Trigger: TGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTG...GTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAGGTGATAGGCGTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAGCCTGGGTGCCTGCTaGAGGAGGGAAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPSLGAC*RREGRN
Trigger: GTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCT...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 90 bp GCCCAATCCCTGCCACTCCAGGGTGCTCACCATTGTAGGAGAGTGTaGGGCTCTCCAGTGACACCCAGGAGCTCAGCAGGTGGCATAGTG +
Preference number: 5 (lower is better)
Translates to: AQSLPLQGAHHCRRV*GSPVTPRSSAGGIV
Trigger: CACTATGCCACCTGCTGAGCTCCTGGGTGTCACTGGAGAGCCTCACACTCTCCTACAATGGTGAGCACCCTGGAGTGGCAGGGATTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS TCA 90 bp CGGGCCCCATCACATGGTGCTAACATAATCTGCGAAGGCCTGGGATaGGTCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RAPSHGANIICEGLG*VHESLTTWQVARSR
Trigger: GCGGCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGACTCATCCCAGGCCTTCGCAGATTATGTTAGCACCATGTGATGGGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617760.4
CDS GCA 90 bp AAATCCTGGGGAGAGGCAAAGGTGGCACTATCCAGGGACAGCTGCTaGAGAGAACCCGAGGCCTTCAGAACGGAGCACAGCAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: KSWGEAKVALSRDSC*REPEAFRTEHSSGA
Trigger: AGCCCCACTGCTGTGCTCCGTTCTGAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCCAGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS GCA 90 bp CCAAAATCCTGGGGAGAGGCAAAGGTGGCACTATCCAGGGACAGCTaGTGCAGAGAACCCGAGGCCTTCAGAACGGAGCACAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PKSWGEAKVALSRDS*CREPEAFRTEHSSG
Trigger: CCCACTGCTGTGCTCCGTTCTGAAGGCCTCGGGTTCTCTGCAGCAGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCCAGGATTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATGGCCTCCATGGTCGTaGCCGCCGCTACCTCACAGA +
Preference number: 5 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKWPPWS*PPLPHR
Trigger: TCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS-3UTR CAA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGTCCAGAACCCTGCGGTaGGGCTCAGCCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRSRTLR*GSATSS
Trigger: CGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGA...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAGCAGGTGGCGGAACTaGAGAGTGTGCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPSRWRN*RVCREL
Trigger: CAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGCT...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTAGCAGGTGGCGGAACTaGAGAGTGTGCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPSRWRN*RVCREL
Trigger: CAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGCT...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGCTCTGGGCATCTGCTaGGCTTCACTCTTACGCCGG +
Preference number: 5 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPALGIC*ASLLRR
Trigger: CCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCCCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: DYKPSCENACLLGLIKASPGTPG*SRWLGW
Trigger: CCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGG...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCAGCGCTCCAGCCGCTaGGCGAACTCCAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCQRSSR*ANSRSP
Trigger: TGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAGCAGAAGGTGACCGCTaGGTGCCAGGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGAEGDR*VPGASW
Trigger: CCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTGC...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCCTGGGTGCCTGCTaGAGGAGGGAAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPSLGAC*RREGRN
Trigger: GTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCT...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCAGCCTGGGTGCCTGCTaGAGGAGGGAAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCSLGAC*RREGRN
Trigger: GTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCT...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGGGAAAAGGGGCTCCTaGCTCCACAGGGCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRGKRGS*LHRALL
Trigger: CAACAGGGCCCTGTGGAGCAAGGAGCCCCTTTTCCC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS CCA 90 bp TATCTCCTCATCGCCTATTATGTGGCTAGGGGGCCCTGCATTCCCTaGCACACCAGGGTTGTCCCGCTGGCTTGGGTGGTCAACACGAAT +
Preference number: 5 (lower is better)
Translates to: YLLIAYYVARGPCIP*HTRVVPLAWVVNTN
Trigger: ATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCACATAATAGGCGATGAGGAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp AACTGCTCCAGGCAGTTTTCTGGTATCTCCTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTCCCTGGCACACCAGGGTTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: NCSRQFSGISSSPIM*LGGPAFPGTPGLSR
Trigger: GCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCACATAATAGGCGATGAGGAGATACCAGAAAACTGCCTGGAGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCAGCCACCAGCTCGGTaGCACCCTGCAGCATGTTAC +
Preference number: 5 (lower is better)
Translates to: CGKPSREEAPYTSLKPGCQPPAR*HPAACY
Trigger: GTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTG...GCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTCAGCCACCAGCTCGGTaGCACCCTGCAGCATGTTAC +
Preference number: 5 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLQPPAR*HPAACY
Trigger: GTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTG...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTCAGCCACCAGCTCGGTaGCACCCTGCAGCATGTTAC +
Preference number: 5 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLQPPAR*HPAACY
Trigger: GTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTG...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp CTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCAGAAAGCAGGTGGCGGAACTaGAGAGTGTGCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LHPRTGDKGIPTQLWLAESRWRN*RVCREL
Trigger: CAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGCT...TTCTGCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGAGCAGGTGGCGGAACTaGAGAGTGTGCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRSRWRN*RVCREL
Trigger: CAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGCT...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp CCGCTTGGCGAACTCCAGAAGCCCATCTGGCTTGATGCAGTTGGAACTGATGTCGCTCTGGGCATCTGCTaGGCTTCACTCTTACGCCGG +
Preference number: 5 (lower is better)
Translates to: PLGELQKPIWLDAVGTDVALGIC*ASLLRR
Trigger: CCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGC...GACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTCGCCAAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGCTCTGGGCATCTGCTaGGCTTCACTCTTACGCCGG +
Preference number: 5 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEALGIC*ASLLRR
Trigger: CCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGC...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCGCAGAAGGTGACCGCTaGGTGCCAGGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: KGPKDYKPSCENACLLGLAEGDR*VPGASW
Trigger: CCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTGC...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGTTCCCTGCAGCTCGCTaGAAACGCTTTAGGGGCTTA +
Preference number: 5 (lower is better)
Translates to: GSGQPMLQPLQADGTEHEFPAAR*KRFRGL
Trigger: TAAGCCCCTAAAGCGTTTCAAGCGAGCTGCAGGGAA...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp ATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATTTCCTATGAGCAAGCCCTGGACAGCTaGAACACCAGCCGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: MNQRGARVSSPILIISYEQALDS*NTSRRV
Trigger: CACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTG...CTCATAGGAAATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAACCGCGGACCGCCATCTaGAAAAGGTCAGCAGTTAGG +
Preference number: 5 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKPRTAI*KRSAVR
Trigger: CCTAACTGCTGACCTTTTCAAGATGGCGGTCCGCGG...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGGGTTTGAGGCCTGAGAGCAGTGTGGTAAGCCCAGCAGGGAAGAAGCCCCCTGTTGCACTGCCGACGTaGTGTCAACAGCCGTCAGAT +
Preference number: 5 (lower is better)
Translates to: KGLRPESSVVSPAGKKPPVALPT*CQQPSD
Trigger: ATCTGACGGCTGTTGACACAACGTCGGCAGTGCAAC...AGGGGGCTTCTTCCCTGCTGGGCTTACCACACTGCTCTCAGGCCTCAAACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAACCTTCTGTCCCTAGGTaGCACTGCCGACGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKPSVPR*HCRRCV
Trigger: GACACAACGTCGGCAGTGCAACCTAGGGACAGAAGG...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGGATGCTTTGAAGTATaGGGCCTGGGAGGGCCCACA +
Preference number: 5 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRGCFEV*GLGGPT
Trigger: TGTGGGCCCTCCCAGGCCCAATACTTCAAAGCATCC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343304.10
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGCCAAACTGGAAGGCCTaGTCTTCATCAGTTCATCCC +
Preference number: 5 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMPNWKA*SSSVHP
Trigger: GGGATGAACTGATGAAGACAAGGCCTTCCAGTTTGG...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGGCCTGGGATGAGTCCCATGAGTCGCTAACCACATGGCAGGTAGCCCGGAGCCCAAACTGGAAGGCCTaGTCTTCATCAGTTCATCCC +
Preference number: 5 (lower is better)
Translates to: KAWDESHESLTTWQVARSPNWKA*SSSVHP
Trigger: GGGATGAACTGATGAAGACAAGGCCTTCCAGTTTGG...GCTCCGGGCTACCTGCCATGTGGTTAGCGACTCATGGGACTCATCCCAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAGCTCTGGGCATCTGCTaGGCTTCACTCTTACGCCGG +
Preference number: 5 (lower is better)
Translates to: RGPKTINPAVRMPVCWASALGIC*ASLLRR
Trigger: CCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGC...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCGCAGAAGGTGACCGCTaGGTGCCAGGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: RKRKIELVVGVLGSPCFSAEGDR*VPGASW
Trigger: CCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTGC...GCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGAGAAGCCCATCTGGCTaGATGCAGTTGGAACTGATG +
Preference number: 5 (lower is better)
Translates to: GSGQPMLQPLQADGTEHERSPSG*MQLELM
Trigger: CATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCT...CTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS TCA 90 bp ATAAAAACGAAGTCATACAGGTCTTCAGACTCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTCTTCCCTGCAGCTCGCTTGAAACGC +
Preference number: 5 (lower is better)
Translates to: IKTKSYRSSDSAPGP*RVRAPFFPAARLKR
Trigger: GCGTTTCAAGCGAGCTGCAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTGTATGACTTCGTTTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCTCGGGCGCCGCCATCTaGGGGAGGTGCGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: VEFCSLGENHQEGLHDVCSGAAI*GRCASP
Trigger: CGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCGA...GCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTGCAGAAGGTGACCGCTaGGTGCCAGGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: KTINPAVRMPVCWASSRPAEGDR*VPGASW
Trigger: CCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTGC...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGCTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMLAGAR*YEDVEE
Trigger: TTCTTCTACATCCTCATACAAACGGGCACCAGCTAG...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCAGCGCTCCAGCCGCTaGGCGAACTCCAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: RILSKGPKDYKPSCENACQRSSR*ANSRSP
Trigger: TGGGCTTCTGGAGTTCGCCAAGCGGCTGGAGCGCTG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAACCACTACCATCCTTaGGGCTACTGCTATATTCTG +
Preference number: 5 (lower is better)
Translates to: VVGVLGSPCFSPCKLMVPNHYHP*GYCYIL
Trigger: CAGAATATAGCAGTAGCCCAAAGGATGGTAGTGGTT...CGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCTCTTCAGCCACTCAGTaGGAAGCTGGAATTTCAGGG +
Preference number: 5 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPSSATQ*EAGISG
Trigger: CCCTGAAATTCCAGCTTCCAACTGAGTGGCTGAAGA...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS TCA 90 bp GGGAGGCTAAGAGGATCGCTTAAGCCCAGGAGTTCGAGGCTACAGTaGGCTATGATCACACCACTGTACTTGAGCCCAGGTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: GRLRGSLKPRSSRLQ*AMITPLYLSPGDTV
Trigger: CACTGTGTCACCTGGGCTCAAGTACAGTGGTGTGATCATAGCTCACTGTAGCCTCGAACTCCTGGGCTTAAGCGATCCTCTTAGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS GCA 90 bp GGCATACAAGCCTTCCTCTCTAACCTCCTGATCATACCCCCAATTTaGCCCTCCCACCTCCCTAGAATTAGGCACACAGCTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GIQAFLSNLLIIPPI*PSHLPRIRHTAGAA
Trigger: AGCAGCACCAGCTGTGTGCCTAATTCTAGGGAGGTGGGAGGGGCAAATTGGGGGTATGATCAGGAGGTTAGAGAGGAAGGCTTGTATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS CCA 90 bp TGCGGAATCTTTGTGAAGCTTCCAGTGCTGGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAGCTCCACAAGCCACTTCCCCAATCT +
Preference number: 5 (lower is better)
Translates to: CGIFVKLPVLEAPGS*DLIHPKLHKPLPQS
Trigger: AGATTGGGGAAGTGGCTTGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTCCAGCACTGGAAGCTTCACAAAGATTCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACTCCAGAACCCTGCGGTaGGGCTCAGCCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNSRTLR*GSATSS
Trigger: CGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGA...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGTTCCCTGCAGCTCGCTaGAAACGCTTTAGGGGCTTA +
Preference number: 5 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRFPAAR*KRFRGL
Trigger: TAAGCCCCTAAAGCGTTTCAAGCGAGCTGCAGGGAA...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCTTCCCTGCAGCTCGCTaGAAACGCTTTAGGGGCTTA +
Preference number: 5 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPFPAAR*KRFRGL
Trigger: TAAGCCCCTAAAGCGTTTCAAGCGAGCTGCAGGGAA...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTTCCCTGCAGCTCGCTaGAAACGCTTTAGGGGCTTA +
Preference number: 5 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSFPAAR*KRFRGL
Trigger: TAAGCCCCTAAAGCGTTTCAAGCGAGCTGCAGGGAA...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 90 bp GCAGGTGGCATAGTGTCAGGGCTGCCTCTGTGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGATGCTGCGGAATCTTTGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: AGGIVSGLPLWRVEL*IAPRWRCCGIFVKL
Trigger: AAGCTTCACAAAGATTCCGCAGCATCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCACAGAGGCAGCCCTGACACTATGCCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AAGCCCAGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTAAGGCCTCCATAAACTaGGCTCGCCAACATGTCACA +
Preference number: 5 (lower is better)
Translates to: KPSREEAPYTSLKPGCLLKASIN*ARQHVT
Trigger: TGTGACATGTTGGCGAGCCAAGTTTATGGAGGCCTT...AAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCCTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCLAGAR*YEDVEE
Trigger: TTCTTCTACATCCTCATACAAACGGGCACCAGCTAG...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp ACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACCTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: TVTSWPRVPRILSKGPKDLAGAR*YEDVEE
Trigger: TTCTTCTACATCCTCATACAAACGGGCACCAGCTAG...GTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAATTCCCTGCAGCTCGCTaGAAACGCTTTAGGGGCTTA +
Preference number: 5 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKFPAAR*KRFRGL
Trigger: TAAGCCCCTAAAGCGTTTCAAGCGAGCTGCAGGGAA...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGCTAGGTTGTACTCTTaGAGTGTTTGCAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: ELVVGVLGSPCFSPCKLMARLYS*SVCKTS
Trigger: GCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC...CATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCAGAAGCCCATCTGGCTaGATGCAGTTGGAACTGATG +
Preference number: 5 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSRSPSG*MQLELM
Trigger: CATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCT...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCTGTGAGAATGCCTGTTaGCTGGGCCTCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFCENAC*LGLIKA
Trigger: GGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACA...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 90 bp GGAGTTGCCCTTCATAGCAGCAACCATCTCAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACGGCAGAAGGAGAAGGTAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: GVALHSSNHLRQKLG*ALLKQTAEGEGNLL
Trigger: CAAGAGATTACCTTCTCCTTCTGCCGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCTGAGATGGTTGCTGCTATGAAGGGCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 90 bp CCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTaGTCATATGTGACGAGGTACTTGACTCTCAGCAGTCAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: PSAFMLESSRKEVLV*SYVTRYLTLSSQAL
Trigger: CAGGGCTTGACTGCTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAAAGGCCTCCATAAACTaGGCTCGCCAACATGTCACA +
Preference number: 5 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKKASIN*ARQHVT
Trigger: TGTGACATGTTGGCGAGCCAAGTTTATGGAGGCCTT...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAAGGCCTCCATAAACTaGGCTCGCCAACATGTCACA +
Preference number: 5 (lower is better)
Translates to: KGPKDYKPSCENACLLGLKASIN*ARQHVT
Trigger: TGTGACATGTTGGCGAGCCAAGTTTATGGAGGCCTT...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGACTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: REEAPYTSLKPGCLLEEGLAGAR*YEDVEE
Trigger: TTCTTCTACATCCTCATACAAACGGGCACCAGCTAG...TCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGGTACTCTTTGAGTGTTaGCAAAACAAGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: GQPMLQPLQADGTEHETVVLFEC*QNKPKI
Trigger: GATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTAC...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp ATGACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCGCTAGGTTGTACTCTTaGAGTGTTTGCAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: MTTVTSWPRVPRILSKGPARLYS*SVCKTS
Trigger: GCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC...GGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCAGAAGCCCATCTGGCTaGATGCAGTTGGAACTGATG +
Preference number: 5 (lower is better)
Translates to: KGPKDYKPSCENACLLGLRSPSG*MQLELM
Trigger: CATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCT...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAAAGAAGCCCATCTGGCTaGATGCAGTTGGAACTGATG +
Preference number: 5 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKRSPSG*MQLELM
Trigger: CATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCT...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCCCAGTGGAGAGGTCTTaGCCTTTATCCAGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPPVERS*PLSSEF
Trigger: AAACTCACTGGATAAAGGCAAAGACCTCTCCACTGG...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp AGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATTCTCTCTGGGCGAGTaGAAGGAGCTGTTTATCCTG +
Preference number: 5 (lower is better)
Translates to: RGPKTINPAVRMPVCWASFSLGE*KELFIL
Trigger: CAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAA...TGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCCCAGGCAGGGACCATaGAGGAGAAGATCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RILSKGPKDYKPSCENACPRQGP*RRRSSS
Trigger: GCTGGAAGATCTTCTCCTCAATGGTCCCTGCCTGGG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS GCA 90 bp CCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAATGATCTaGTTGAGTATTTCAGCTTGGTACATTTTGTTAATTCCGGCATCC +
Preference number: 5 (lower is better)
Translates to: PAGGCSSPELPSRMI*LSISAWYILLIPAS
Trigger: GGATGCCGGAATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGAGTTCCGGAGATGAGCACCCGCCGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS CCA 90 bp GCTAGGTTGTACTCTTTGAGTGTTTGCAAAACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCACTATCCAGGGACAGCTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ARLYSLSVCKTSPKS*GEAKVALSRDSCCR
Trigger: TCTGCAGCAGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKLAGAR*YEDVEE
Trigger: TTCTTCTACATCCTCATACAAACGGGCACCAGCTAG...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp TCACCTCCACCCAAGAACAGGGGACAAGGGTATCCCAACCCAACTATGGCTGGCGCTAGGTTGTACTCTTaGAGTGTTTGCAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: SPPPKNRGQGYPNPTMAGARLYS*SVCKTS
Trigger: GCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC...GCCAGCCATAGTTGGGTTGGGATACCCTTGTCCCCTGTTCTTGGGTGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp TGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCCTTTTCAGGGCTAGGTaGTACTCTTTGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: WPRVPRILSKGPKDYKPSLFRAR*YSLSVC
Trigger: GCAAACACTCAAAGAGTACAACCTAGCCCTGAAAAG...GCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCTTTTCAGGGCTAGGTaGTACTCTTTGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: EEAPYTSLKPGCLLEEGRLFRAR*YSLSVC
Trigger: GCAAACACTCAAAGAGTACAACCTAGCCCTGAAAAG...CCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGAAGCCCATCTGGCTaGATGCAGTTGGAACTGATG +
Preference number: 5 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFRSPSG*MQLELM
Trigger: CATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCT...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GGGCAGCCCATGCTTCAGCCCCTGCAAGCTGATGGTACCGAGCATGAGACTGTGCTAATAGGAATGTCGTaGCCACTTTCAGTATATCAA +
Preference number: 5 (lower is better)
Translates to: GQPMLQPLQADGTEHETVLIGMS*PLSVYQ
Trigger: TTGATATACTGAAAGTGGCAACGACATTCCTATTAG...CACAGTCTCATGCTCGGTACCATCAGCTTGCAGGGGCTGAAGCATGGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp AAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCTCTGCCCCTGTACCTTaGTCATGCTGTTCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KGPKDYKPSCENACLLGLSAPVP*SCCSFQ
Trigger: TTGGAAAGAACAGCATGACAAAGGTACAGGGGCAGA...GAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCTATCAGCTCCCTGCTTaGCCTCCTACATTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFYQLPA*PPTFQP
Trigger: TGGCTGAAATGTAGGAGGCAAAGCAGGGAGCTGATA...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACCAGATTCCAGCTGGCTaGTCTCACTGCCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNQIPAG*SHCPSG
Trigger: TCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTG...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp ACCACTGTAACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAATGTAGTTTCAACCCTTaGGTTTTCCTGCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: TTVTSWPRVPRILSKGPKCSFNP*VFLLPF
Trigger: AAAAGGGAGCAGGAAAACCAAAGGGTTGAAACTACA...TTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGTTACAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCTTGAATGAGTTAGAGTaGGGCTTGGTGCAGAAATCT +
Preference number: 5 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCLNELE*GLVQKS
Trigger: AGATTTCTGCACCAAGCCCAACTCTAACTCATTCAA...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAAACTGGAAGGCCTaGTCTTCATCAGTTCATCCC +
Preference number: 5 (lower is better)
Translates to: KTINPAVRMPVCWASSRPPNWKA*SSSVHP
Trigger: GGGATGAACTGATGAAGACAAGGCCTTCCAGTTTGG...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCAGCAGGTGGCGGAACTaGAGAGTGTGCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPSRWRN*RVCREL
Trigger: CAGCTCCCTGCACACTCTCAAGTTCCGCCACCTGCT...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCGCTCTGGGCATCTGCTaGGCTTCACTCTTACGCCGG +
Preference number: 5 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPALGIC*ASLLRR
Trigger: CCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGC...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp AGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCCCCTGCGTACTCTTTGAGTGTTaGCAAAACAAGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: RKIELVVGVLGSPCFSPCVLFEC*QNKPKI
Trigger: GATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTAC...GCAGGGGCTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp TATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGGAAGGCAGGAACCCAGGGCTAGGTTGTACTCTTaGAGTGTTTGCAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: YTSLKPGCLLEEGRQEPRARLYS*SVCKTS
Trigger: GCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC...CCTGGGTTCCTGCCTTCCCTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp ACCTCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACTTTTCAGGGCTAGGTaGTACTCTTTGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: TSWPRVPRILSKGPKDYKLFRAR*YSLSVC
Trigger: GCAAACACTCAAAGAGTACAACCTAGCCCTGAAAAG...TTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp CCCTGCCTGAGCATGCATATACTATACTGCTCCCACCTGCCCTTGGACTGCCTTCTGGTTGCCTGGGTTTaGAATCCTAGCTCTATAATT +
Preference number: 5 (lower is better)
Translates to: PCLSMHILYCSHLPLDCLLVAWV*NPSSII
Trigger: AATTATAGAGCTAGGATTCAAAACCCAGGCAACCAG...AAGGCAGTCCAAGGGCAGGTGGGAGCAGTATAGTATATGCATGCTCAGGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS GCA 90 bp CAAGCCATCAGAGCCCTCCTCCCAAATCCATTCCATCATTGCCTCTaGACTTTATCAGTACCCAGCTTGTGTTTGTGTGCTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: QAIRALLPNPFHHCL*TLSVPSLCLCAIPA
Trigger: AGCAGGAATAGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATGATGGAATGGATTTGGGAGGAGGGCTCTGATGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS-3UTR CAA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTCCAAACTGGAAGGCCTaGTCTTCATCAGTTCATCCC +
Preference number: 5 (lower is better)
Translates to: RILSKGPKDYKPSCENACPNWKA*SSSVHP
Trigger: GGGATGAACTGATGAAGACAAGGCCTTCCAGTTTGG...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAGCTGTGAGAATGCCTGTAAGGCCTCCATAAACTaGGCTCGCCAACATGTCACA +
Preference number: 5 (lower is better)
Translates to: RILSKGPKDYKPSCENACKASIN*ARQHVT
Trigger: TGTGACATGTTGGCGAGCCAAGTTTATGGAGGCCTT...ACAGGCATTCTCACAGCTGGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACTTCCCTGCAGCTCGCTaGAAACGCTTTAGGGGCTTA +
Preference number: 5 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNFPAAR*KRFRGL
Trigger: TAAGCCCCTAAAGCGTTTCAAGCGAGCTGCAGGGAA...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp AGCAGGGAAGAAGCCCCCTATACTTCTCTAAAGCCTGGGTGCCTGCTTGAGGAGGTACTCTTTGAGTGTTaGCAAAACAAGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: SREEAPYTSLKPGCLLEEVLFEC*QNKPKI
Trigger: GATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTAC...CTCCTCAAGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS-3UTR CAA 90 bp CAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCAGCTTTTCAGGGCTAGGTaGTACTCTTTGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: QKEKDRTGGWGSGQPMLQLFRAR*YSLSVC
Trigger: GCAAACACTCAAAGAGTACAACCTAGCCCTGAAAAG...CTGAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCCTTTTCAGGGCTAGGTaGTACTCTTTGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFLFRAR*YSLSVC
Trigger: GCAAACACTCAAAGAGTACAACCTAGCCCTGAAAAG...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp TCCTGGCCCAGGGTTCCCAGGATACTGAGTAAGGGGCCCAAAGACTATAAACCCAAACAAAACCTGCTCTaGCCAACTTCTCTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: SWPRVPRILSKGPKDYKPKQNLL*PTSLVL
Trigger: TAGAACTAGAGAAGTTGGCAAGAGCAGGTTTTGTTT...GGGTTTATAGTCTTTGGGCCCCTTACTCAGTATCCTGGGAACCCTGGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp GGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCATTTCCTCCAGAATGATCTGCTaGAGTATTTCAGCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: GFMNQRGARVSSPILIISSRMIC*SISAWY
Trigger: GTACCAAGCTGAAATACTCAAGCAGATCATTCTGGA...GGAAATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp ATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTCCTTCCGCCTTCATGTaGGAGTCCTCCAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: ISYETFRLHVGVLQKGSVPSAFM*ESSRKE
Trigger: TTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGG...AACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp AAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTCAGGAACAAGGCCTCCATAAACTaGGCTCGCCAACATGTCACA +
Preference number: 5 (lower is better)
Translates to: KCIHSSDSSWLVSLPLRNKASIN*ARQHVT
Trigger: TGTGACATGTTGGCGAGCCAAGTTTATGGAGGCCTT...GTTCCTGAGGGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTGCAGAAGGTGACCGCTaGGTGCCAGGAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSAEGDR*VPGASW
Trigger: CCATGAGGCTCCTGGCACCAAGCGGTCACCTTCTGC...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp GACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCATGCTTCGCTAGGTTGTACTCTTaGAGTGTTTGCAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: DRKRKIELVVGVLGSPCFARLYS*SVCKTS
Trigger: GCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC...GAAGCATGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp GACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTCCAGCAAAATGAACCATTaGGCATTGAAAAGGACCTAC +
Preference number: 5 (lower is better)
Translates to: DYKPSCENACLLGLIKASSKMNH*ALKRTY
Trigger: GTAGGTCCTTTTCAATGCCAAATGGTTCATTTTGCT...GGAGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS-3UTR CAA 90 bp ATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTCCAGAAAGGAAGTGTaGGTCTGGTCATATGTGACG +
Preference number: 5 (lower is better)
Translates to: MLESSRKEVLVWSYVTRYSRKEV*VWSYVT
Trigger: CGTCACATATGACCAGACCAACACTTCCTTTCTGGA...GTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS TCA 90 bp ATCTCTTGCAGAGTCAGATTCTGTAGCAAAAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATGTCATGGAAGCTCAGTCTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: ISCRVRFCSKKSTSL*QSARFMSWKLSLFR
Trigger: CCTGAAAAGACTGAGCTTCCATGACATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTTTTTGCTACAGAATCTGACTCTGCAAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 90 bp TATCTTCAGCCACTCAGTTGGAAGCTGGAATTTCAGGGGCAAGGGTaGGATCATCCCACAAAACAAGCTGACATGCTAAATGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: YLQPLSWKLEFQGQG*DHPTKQADMLNELD
Trigger: GTCAAGCTCATTTAGCATGTCAGCTTGTTTTGTGGGATGATCTCACCCTTGCCCCTGAAATTCCAGCTTCCAACTGAGTGGCTGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS GCA 90 bp TTTGTGTCCCCTGCAAATACAGTGAGCAAGCAATTCAGTGACAAATaGCAAATGGACCAAAACCTTGTGACAAGCCATCAGAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: FVSPANTVSKQFSDK*QMDQNLVTSHQSPP
Trigger: AGGAGGGCTCTGATGGCTTGTCACAAGGTTTTGGTCCATTTGGCATTTGTCACTGAATTGCTTGCTCACTGTATTTGCAGGGGACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS-3UTR CAA 90 bp TGTAGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATGTACTCTTTGAGTGTTaGCAAAACAAGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: CRRIHEPAWSQGVFSHPHVLFEC*QNKPKI
Trigger: GATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTAC...ATGAGGATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp CCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAGCTAGGTTGTACTCTTaGAGTGTTTGCAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: PSSSFPMRPSAFMLESSRARLYS*SVCKTS
Trigger: GCTTGTTTTGCAAACACTCAAAGAGTACAACCTAGC...TCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp TCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGCTTTTCAGGGCTAGGTaGTACTCTTTGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSFPMRPSAFMLESSRKLFRAR*YSLSVC
Trigger: GCAAACACTCAAAGAGTACAACCTAGCCCTGAAAAG...CTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS-3UTR CAA 90 bp AAAGGTGACAGAAAGAGAAAGATAGAACTGGTGGTTGGGGTTCTGGGCAGCCCAGTACTCTTTGAGTGTTaGCAAAACAAGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: KGDRKRKIELVVGVLGSPVLFEC*QNKPKI
Trigger: GATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTAC...TGGGCTGCCCAGAACCCCAACCACCAGTTCTATCTTTCTCTTTCTGTCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp AAGACTATAAACCCAGCTGTGAGAATGCCTGTTTGCTGGGCCTCATCAAGGCCTGTACTCTTTGAGTGTTaGCAAAACAAGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: KTINPAVRMPVCWASSRPVLFEC*QNKPKI
Trigger: GATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTAC...AGGCCTTGATGAGGCCCAGCAAACAGGCATTCTCACAGCTGGGTTTATAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
CDS-3UTR CAA 90 bp CCATATCTAAAATGTATTCATTCTTCAGATTCCAGCTGGCTTGTCTCACTGCCCCTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: PYLKCIHSSDSSWLVSLPLAGAR*YEDVEE
Trigger: TTCTTCTACATCCTCATACAAACGGGCACCAGCTAG...GGGCAGTGAGACAAGCCAGCTGGAATCTGAAGAATGAATACATTTTAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS-3UTR CAA 90 bp GTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCGAGTTAGAGTTGGGCTaGGTGCAGAAATCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: VEFCSLGENHQEGLHDVCELELG*VQKSEA
Trigger: AGCTTCAGATTTCTGCACCAAGCCCAACTCTAACTC...GCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS-3UTR CAA 90 bp AACCCCTGCTTTCAACAACTAATCAAGTGTATAGACTTTATGTTCCTCTCTTCTCCAAACTGGAAGGCCTaGTCTTCATCAGTTCATCCC +
Preference number: 5 (lower is better)
Translates to: NPCFQQLIKCIDFMFLSSPNWKA*SSSVHP
Trigger: GGGATGAACTGATGAAGACAAGGCCTTCCAGTTTGG...AGAAGAGAGGAACATAAAGTCTATACACTTGATTAGTTGTTGAAAGCAGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS TCA 90 bp CCATTAGCTTCCATCCAGAACAAGTCTATTAATCCCTCCTTCATGTaGCAGCCATTCATATATTTCAAGATGGGTCATGTTTCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: PLASIQNKSINPSFM*QPFIYFKMGHVSQV
Trigger: GACTTGGGAAACATGACCCATCTTGAAATATATGAATGGCTGTCACATGAAGGAGGGATTAATAGACTTGTTCTGGATGGAAGCTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS GCA 90 bp ACACTTAACTACTTTTTCATTTACCTAACATATTATGCCGCTTTCTaGCCCTGTACCTTTGTCATGCTGTTCTTTCCAATAGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: TLNYFFIYLTYYAAF*PCTFVMLFFPIGMS
Trigger: GGACATTCCTATTGGAAAGAACAGCATGACAAAGGTACAGGGGCAGAAAGCGGCATAATATGTTAGGTAAATGAAAAAGTAGTTAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS CCA 90 bp CTGTTTAAAACAATGCCCAGCCATAATAAGCTCGCTAAATGTTGGTaGTTATTTTTATCCTGTCAATGGCATCTCTGTCCAATCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LFKTMPSHNKLAKCW*LFLSCQWHLCPIKN
Trigger: GTTCTTGATTGGACAGAGATGCCATTGACAGGATAAAAATAACCACCAACATTTAGCGAGCTTATTATGGCTGGGCATTGTTTTAAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CCA 90 bp AATCTGTTTAAAACAATGCCCAGCCATAATAAGCTCGCTAAATGTTaGTGGTTATTTTTATCCTGTCAATGGCATCTCTGTCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: NLFKTMPSHNKLAKC*WLFLSCQWHLCPIK
Trigger: CTTGATTGGACAGAGATGCCATTGACAGGATAAAAATAACCACCAACATTTAGCGAGCTTATTATGGCTGGGCATTGTTTTAAACAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS TCA 90 bp ACTACTCATCTTTCAAGTATCACATGCCCTTTATTAAGTCTTTCCTaGATTCCTTTTCCATTTTTCCAGATTAACCACTACCATCCTTTG +
Preference number: 5 (lower is better)
Translates to: TTHLSSITCPLLSLS*IPFPFFQINHYHPL
Trigger: CAAAGGATGGTAGTGGTTAATCTGGAAAAATGGAAAAGGAATTCAGGAAAGACTTAATAAAGGGCATGTGATACTTGAAAGATGAGTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS TCA 90 bp TATTTATTCTACTGGAAAGGAAAATGGAAGGGTAGACTTCTCATTTaGCAAATGGAACCTCTAGAAGCTAATCTAGATCTGTTCCAAACT +
Preference number: 5 (lower is better)
Translates to: YLFYWKGKWKGRLLI*QMEPLEANLDLFQT
Trigger: AGTTTGGAACAGATCTAGATTAGCTTCTAGAGGTTCCATTTGTCAAATGAGAAGTCTACCCTTCCATTTTCCTTTCCAGTAGAATAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS CAA 90 bp CAGAACCAGCAACTCCGGGCGCGCCAGGCCTCGGGCGCCGCCATCTaGGGGAGGTGCGCGAGCCCGAGAGTGTCGCCCGCGGACCGCCAT +
Preference number: 6 (lower is better)
Translates to: QNQQLRARQASGAAI*GRCASPRVSPADRH
Trigger: ATGGCGGTCCGCGGGCGACACTCTCGGGCTCGCGCACCTCCCCAAGATGGCGGCGCCCGAGGCCTGGCGCGCCCGGAGTTGCTGGTTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS CAA 90 bp AGCTCTTCGCTGGCGCCGCCTCCCGGGACGTGGCCTCCATGGTCGTaGCCGCCGCTACCTCACAGAACCAGCAACTCCGGGCGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSLAPPPGTWPPWS*PPLPHRTSNSGRAR
Trigger: CCTGGCGCGCCCGGAGTTGCTGGTTCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCCGGGAGGCGGCGCCAGCGAAGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS CCA 72 bp AGGCCGAGCTCTTCGCTGGCGCCGCCTCCCGGGACGTaGCCTCCATGGTCGTTGCCGCCGCTACCTCACAGA +
Preference number: 6 (lower is better)
Translates to: RPSSSLAPPPGT*PPWSLPPLPHR
Trigger: TCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343304.10
ENST00000617190.5
CDS GCA 72 bp CTTGGCTTCACTCTTACGCCGGCTGGCCATCAGGGCTaGAGCACATCGCTCAGCAGCATCCCGGCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: LGFTLTPAGHQG*STSLSSIPAGP
Trigger: CGGCCCCGCCGGGATGCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp GCAGGGAGCTGGCCAGGGTCTCCAGAACCCTGCGGTTaGGCTCAGCCACCAGCTCGGTTGCACCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: AGSWPGSPEPCG*AQPPARLHPAA
Trigger: TGCTGCAGGGTGCAACCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGAGACCCTGGCCAGCTCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 72 bp TCACTGAGATGCAGGGCACGGAGGCGACATCCAGCCTaGCCTGACAGGGCCCGCAGGCTGTCTAGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SLRCRARRRHPA*PDRARRLSSRR
Trigger: CCGCCTGCTAGACAGCCTGCGGGCCCTGTCAGGCCAGGCTGGATGTCGCCTCCGTGCCCTGCATCTCAGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 72 bp TGCAGGGAGCTGGCCAGGGTCTCCAGAACCCTGCGGTaGGGCTCAGCCACCAGCTCGGTTGCACCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CRELARVSRTLR*GSATSSVAPCS
Trigger: GCTGCAGGGTGCAACCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTGGAGACCCTGGCCAGCTCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 72 bp CAAGGCCAGCAGGCCAGCATTCCCCAGGCGGTTCCCTaGCAGCCGGAGGCCCTTCAGTGTGGAGTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: QGQQASIPQAVP*QPEALQCGVAL
Trigger: AAGGGCAACTCCACACTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGGAATGCTGGCCTGCTGGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp TGCTCCGGCGTGTTACCCGAGTGGCAGGTGCAGCTCTaGGCATCTGCTTGGCTTCACTCTTACGCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: CSGVLPEWQVQL*ASAWLHSYAGW
Trigger: CCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp GAGGCCTTCAGAACGGAGCACAGCAGTGGGGCTGGCTaGGCTCCCCGTGGAAATCCCATCTCCAACTGCTCC +
Preference number: 6 (lower is better)
Translates to: EAFRTEHSSGAG*APRGNPISNCS
Trigger: GGAGCAGTTGGAGATGGGATTTCCACGGGGAGCCCAGCCAGCCCCACTGCTGTGCTCCGTTCTGAAGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 90 bp CTCCGGCGTGTTACCCGAGTGGCAGGTGCAGCTCTGGGCATCTGCTaGGCTTCACTCTTACGCCGGCTGGCCATCAGGGCTGCAGCACAT +
Preference number: 6 (lower is better)
Translates to: LRRVTRVAGAALGIC*ASLLRRLAIRAAAH
Trigger: ATGTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 90 bp CCACCCAGGCGGTTCCCTGGCAGCCGGAGGCCCTTCAGTGTGGAGTaGCCCTTCATAGCAGCAACCATCTCAGGCAGAAATTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PPRRFPGSRRPFSVE*PFIAATISGRNWAG
Trigger: CCCAGCCCAATTTCTGCCTGAGATGGTTGCTGCTATGAAGGGCAACTCCACACTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS TCA 72 bp TCAGCTCCAGGATGGGCAGTGGTGAGAACAGGTCACTaGGATGCAGGGCACGGAGGCGACATCCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SAPGWAVVRTGH*DAGHGGDIQPG
Trigger: GCCAGGCTGGATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCACCACTGCCCATCCTGGAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 72 bp CGCGAGCCCGAGAGTGTCGCCCGCGGACCGCCATCTTaGAAAGGTCAGCAGTTAGGACGGCTCCATAAGCGA +
Preference number: 6 (lower is better)
Translates to: REPESVARGPPS*KGQQLGRLHKR
Trigger: TCGCTTATGGAGCCGTCCTAACTGCTGACCTTTTCAAGATGGCGGTCCGCGGGCGACACTCTCGGGCTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS GCA 72 bp TCCAGGATGGGCAGTGGTGAGAACAGGTCACTGAGATaGAGGGCACGGAGGCGACATCCAGCCTGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: SRMGSGENRSLR*RARRRHPAWPD
Trigger: GTCAGGCCAGGCTGGATGTCGCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCACCACTGCCCATCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp CTCTCCACAGAGGCGGCAGGGTGGGCCACCAGGCCCTaGTTGCCAGAAGCCAGCACTCATGGTGAGAATAAG +
Preference number: 6 (lower is better)
Translates to: LSTEAAGWATRP*LPEASTHGENK
Trigger: CTTATTCTCACCATGAGTGCTGGCTTCTGGCAACCAGGGCCTGGTGGCCCACCCTGCCGCCTCTGTGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 72 bp TTACCCGAGTGGCAGGTGCAGCTCTGGGCATCTGCTTaGCTTCACTCTTACGCCGGCTGGCCATCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LPEWQVQLWASA*LHSYAGWPSGL
Trigger: CAGCCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp TCAGGCTCTCCTGTGTGCTCCGGCGTGTTACCCGAGTaGCAGGTGCAGCTCTGGGCATCTGCTTGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: SGSPVCSGVLPE*QVQLWASAWLH
Trigger: GTGAAGCCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGCCGGAGCACACAGGAGAGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp GGCCCTGCATTCCCTGGCACACCAGGGTTGTCCCGCTaGCTTGGGTGGTCAACACGAATAGAGAGGACCCGT +
Preference number: 6 (lower is better)
Translates to: GPAFPGTPGLSR*LGWSTRIERTR
Trigger: ACGGGTCCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 72 bp TGGCTAGGGGGCCCTGCATTCCCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGGTCAACACGAATAGAG +
Preference number: 6 (lower is better)
Translates to: WLGGPAFPGTPG*SRWLGWSTRIE
Trigger: CTCTATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 90 bp TTCCCCAGGCGGTTCCCTGGCAGCCGGAGGCCCTTCAGTGTGGAGTaGCCCTTCATAGCAGCAACCATCTCAGGCAGAAATTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: FPRRFPGSRRPFSVE*PFIAATISGRNWAG
Trigger: CCCAGCCCAATTTCTGCCTGAGATGGTTGCTGCTATGAAGGGCAACTCCACACTGAAGGGCCTCCGGCTGCCAGGGAACCGCCTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 72 bp AAGTCATACAGGTCTTCAGACTCTGCACCAGGCCCCTaGCGGGTGCGAGCACCCTTCTTCCCTGCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: KSYRSSDSAPGP*RVRAPFFPAAR
Trigger: GCGAGCTGCAGGGAAGAAGGGTGCTCGCACCCGTCAGGGGCCTGGTGCAGAGTCTGAAGACCTGTATGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 72 bp CACGATAGCACGTGTCAGCTCCAGGATGGGCAGTGGTaGGAACAGGTCACTGAGATGCAGGGCACGGAGGCG +
Preference number: 6 (lower is better)
Translates to: HDSTCQLQDGQW*EQVTEMQGTEA
Trigger: CGCCTCCGTGCCCTGCATCTCAGTGACCTGTTCTCACCACTGCCCATCCTGGAGCTGACACGTGCTATCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS GCA 72 bp CTGCGGTTGGGCTCAGCCACCAGCTCGGTTGCACCCTaGAGCATGTTACAGATGGTGAGCTGTCGGACATGG +
Preference number: 6 (lower is better)
Translates to: LRLGSATSSVAP*SMLQMVSCRTW
Trigger: CCATGTCCGACAGCTCACCATCTGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTGAGCCCAACCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS GCA 72 bp CAGAACCCTGCGGTTGGGCTCAGCCACCAGCTCGGTTaGACCCTGCAGCATGTTACAGATGGTGAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: QNPAVGLSHQLG*TLQHVTDGELS
Trigger: CGACAGCTCACCATCTGTAACATGCTGCAGGGTGCAACCGAGCTGGTGGCTGAGCCCAACCGCAGGGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 72 bp CTCTGGGCATCTGCTTGGCTTCACTCTTACGCCGGCTaGCCATCAGGGCTGCAGCACATCGCTCAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: LWASAWLHSYAG*PSGLQHIAQQH
Trigger: ATGCTGCTGAGCGATGTGCTGCAGCCCTGATGGCCAGCCGGCGTAAGAGTGAAGCCAAGCAGATGCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp GTGAGGCTCTCCAGTGACACCCAGGAGCTCAGCAGGTaGCATAGTGTCAGGGCTGCCTCTGTGGAGAGTGGA +
Preference number: 6 (lower is better)
Translates to: VRLSSDTQELSR*HSVRAASVESG
Trigger: TCCACTCTCCACAGAGGCAGCCCTGACACTATGCCACCTGCTGAGCTCCTGGGTGTCACTGGAGAGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 90 bp CCTATTATGTGGCTAGGGGGCCCTGCATTCCCTGGCACACCAGGGTaGTCCCGCTGGCTTGGGTGGTCAACACGAATAGAGAGGACCCGT +
Preference number: 6 (lower is better)
Translates to: PIMWLGGPAFPGTPG*SRWLGWSTRIERTR
Trigger: ACGGGTCCTCTCTATTCGTGTTGACCACCCAAGCCAGCGGGACAACCCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCACATAATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 72 bp AGGTACTTGACTCTCAGCAGTCAAGCCCTGGACAGCTaGAACACCAGCCGGCGGGTGCTCATCTCCGGAACT +
Preference number: 6 (lower is better)
Translates to: RYLTLSSQALDS*NTSRRVLISGT
Trigger: AGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTGACTGCTGAGAGTCAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS GCA 72 bp TGGTCCCAGCTACTCGAGAGGCTGAGATGGGAGAATTaGTTGAGCCCAGAAGACAGAGGTGGCAGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: WSQLLERLRWEN*LSPEDRGGSEL
Trigger: CAGCTCACTGCCACCTCTGTCTTCTGGGCTCAAGCAATTCTCCCATCTCAGCCTCTCGAGTAGCTGGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CCA 72 bp AGGCAGTTTTCTGGTATCTCCTCATCGCCTATTATGTaGCTAGGGGGCCCTGCATTCCCTGGCACACCAGGG +
Preference number: 6 (lower is better)
Translates to: RQFSGISSSPIM*LGGPAFPGTPG
Trigger: CCCTGGTGTGCCAGGGAATGCAGGGCCCCCTAGCCACATAATAGGCGATGAGGAGATACCAGAAAACTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 72 bp GGCTTAGGCTGTGGGGCTGAGCTAGCTGGTGCCCGTTaGTATGAGGATGTAGAAGAAGAGGCAGAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: GLGCGAELAGAR*YEDVEEEAEEV
Trigger: CACCTCCTCTGCCTCTTCTTCTACATCCTCATACAAACGGGCACCAGCTAGCTCAGCCCCACAGCCTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 72 bp TTCATCAGTTCATCCCAGAGTCGGCGCCAGATGGCCTaGGTTGAGAGGCCTTTCTTGAGGGCAGTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: FISSSQSRRQMA*VERPFLRAVSS
Trigger: TGAGGAAACTGCCCTCAAGAAAGGCCTCTCAACTCAGGCCATCTGGCGCCGACTCTGGGATGAACTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000469150.1
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS CCA 72 bp TTTGTGAAGCTTCCAGTGCTGGAAGCCCCAGGCAGCTaGGATCTGATCCATCCAAAGCTCCACAAGCCACTT +
Preference number: 6 (lower is better)
Translates to: FVKLPVLEAPGS*DLIHPKLHKPL
Trigger: AAGTGGCTTGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTTCCAGCACTGGAAGCTTCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CCA 72 bp TTGCCCTTCATAGCAGCAACCATCTCAGGCAGAAATTaGGCTGGGCGCTTCTCAAACAGACGGCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LPFIAATISGRN*AGRFSNRRQKE
Trigger: CTCCTTCTGCCGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCTGAGATGGTTGCTGCTATGAAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 72 bp TCCCAGCTACTCGAGAGGCTGAGATGGGAGAATTGCTaGAGCCCAGAAGACAGAGGTGGCAGTGAGCTGATA +
Preference number: 6 (lower is better)
Translates to: SQLLERLRWENC*SPEDRGGSELI
Trigger: TATCAGCTCACTGCCACCTCTGTCTTCTGGGCTCAAGCAATTCTCCCATCTCAGCCTCTCGAGTAGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS TCA 72 bp ACATGGCGGGAGCTGTGCAGAAGAGGTGAGAACCGCTaGTCACAAAGACGCCTGTCAGAAGACACATCAATG +
Preference number: 6 (lower is better)
Translates to: TWRELCRRGENR*SQRRLSEDTSM
Trigger: CATTGATGTGTCTTCTGACAGGCGTCTTTGTGATCAGCGGTTCTCACCTCTTCTGCACAGCTCCCGCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
CDS TCA 72 bp TGCTATGAGGCATACAAGCCTTCCTCTCTAACCTCCTaGTCATACCCCCAATTTGCCCCTCCCACCTCCCTA +
Preference number: 6 (lower is better)
Translates to: CYEAYKPSSLTS*SYPQFAPPTSL
Trigger: TAGGGAGGTGGGAGGGGCAAATTGGGGGTATGATCAGGAGGTTAGAGAGGAAGGCTTGTATGCCTCATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS TCA 72 bp TCACATGGTGCTAACATAATCTGCGAAGGCCTGGGATaGGTCCATGAGTCGCTAACCACATGGCAGGTAGCC +
Preference number: 6 (lower is better)
Translates to: SHGANIICEGLG*VHESLTTWQVA
Trigger: GGCTACCTGCCATGTGGTTAGCGACTCATGGACTCATCCCAGGCCTTCGCAGATTATGTTAGCACCATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617760.4
CDS CCA 72 bp CTTCATAGCAGCAACCATCTCAGGCAGAAATTGGGCTaGGCGCTTCTCAAACAGACGGCAGAAGGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: LHSSNHLRQKLG*ALLKQTAEGEG
Trigger: ACCTTCTCCTTCTGCCGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCTGAGATGGTTGCTGCTATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 72 bp ATAGTGTCAGGGCTGCCTCTGTGGAGAGTGGAACTGTaGATAGCTCCAAGGTGGAGATGCTGCGGAATCTTT +
Preference number: 6 (lower is better)
Translates to: IVSGLPLWRVEL*IAPRWRCCGIF
Trigger: AAAGATTCCGCAGCATCTCCACCTTGGAGCTATTCACAGTTCCACTCTCCACAGAGGCAGCCCTGACACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000498402.2
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS GCA 72 bp GAATCTAGCCTTGTTTGCCACATCAGAGAGGAGCCCTaGCTTGTCTTTGGGAGTATAACTCCAGCTGATGTC +
Preference number: 6 (lower is better)
Translates to: ESSLVCHIREEP*LVFGSITPADV
Trigger: GACATCAGCTGGAGTTATACTCCCAAAGACAAGGCAGGGCTCCTCTCTGATGTGGCAAACAAGGCTAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS CCA 72 bp TACTCTTTGAGTGTTTGCAAAACAAGCCCAAAATCCTaGGGAGAGGCAAAGGTGGCACTATCCAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: YSLSVCKTSPKS*GEAKVALSRDS
Trigger: GCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCCAGGATTTTGGGCTTGTTTTGCAAACACTCAAAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS CAA 72 bp ACTTCAGTCTCCATCCAGTCCCTCTTCATCCTGCTCTaGGTGATGACACTACCCTCTTCAAAACCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: TSVSIQSLFILL*VMTLPSSKPLE
Trigger: CTCCAAGGGTTTTGAAGAGGGTAGTGTCATCACCAAGAGCAGGATGAAGAGGGACTGGATGGAGACTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 72 bp AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGTACTaGACTCTCAGCAGTCAAGCCCTGGACAGCTTGAAC +
Preference number: 6 (lower is better)
Translates to: KEVLVWSYVTRY*TLSSQALDSLN
Trigger: GTTCAAGCTGTCCAGGGCTTGACTGCTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS CAA 90 bp ATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTaGGTCTGGTCATATGTGACGAGGTACTTGACTCTCAGCAGTCAA +
Preference number: 6 (lower is better)
Translates to: MRPSAFMLESSRKEV*VWSYVTRYLTLSSQ
Trigger: TTGACTGCTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS GCA 72 bp AGAGCCCTCCTCCCAAATCCATTCCATCATTGCCTCTaGACTTTATCAGTACCCAGCTTGTGTTTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: RALLPNPFHHCL*TLSVPSLCLCA
Trigger: AGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATGATGGAATGGATTTGGGAGGAGGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 90 bp CTTGTGACAAGCCATCAGAGCCCTCCTCCCAAATCCATTCCATCATaGCCTCTGCACTTTATCAGTACCCAGCTTGTGTTTGTGTGCTAT +
Preference number: 6 (lower is better)
Translates to: LVTSHQSPPPKSIPS*PLHFISTQLVFVCY
Trigger: ATAGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATGATGGAATGGATTTGGGAGGAGGGCTCTGATGGCTTGTCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS TCA 72 bp AGAGTCAGATTCTGTAGCAAAAAGAGCACCTCGCTCTaGCAGTCAGCGAGATTCATGTCATGGAAGCTCAGT +
Preference number: 6 (lower is better)
Translates to: RVRFCSKKSTSL*QSARFMSWKLS
Trigger: ACTGAGCTTCCATGACATGAATCTCGCTGACTGTCAGAGCGAGGTGCTCTTTTTGCTACAGAATCTGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343304.10
ENST00000472710.2
ENST00000496156.5
ENST00000615587.4
ENST00000617190.5
ENST00000617760.4
CDS TCA 72 bp CCACTCAGTTGGAAGCTGGAATTTCAGGGGCAAGGGTaGGATCATCCCACAAAACAAGCTGACATGCTAAAT +
Preference number: 6 (lower is better)
Translates to: PLSWKLEFQGQG*DHPTKQADMLN
Trigger: ATTTAGCATGTCAGCTTGTTTTGTGGGATGATCTCACCCTTGCCCCTGAAATTCCAGCTTCCAACTGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS GCA 72 bp TTTATGTTCCTCTCTTCTAGCAATGACAGTCTCCCCTaGTATGAGGCATACAAGCCTTCCTCTCTAACCTCC +
Preference number: 6 (lower is better)
Translates to: FMFLSSSNDSLP*YEAYKPSSLTS
Trigger: GGAGGTTAGAGAGGAAGGCTTGTATGCCTCATAGCAGGGGAGACTGTCATTGCTAGAAGAGAGGAACATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498402.2
CDS CCA 72 bp TTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTaGTCATATGTGACGAGGTACTTGACTCTCAGCAGT +
Preference number: 6 (lower is better)
Translates to: FMLESSRKEVLV*SYVTRYLTLSS
Trigger: ACTGCTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS CAA 72 bp TGTATTCCAACTCCCACGTTCCCAGTGGAGAGGTCTTaGCCTTTATCCAGTGAGTTTTTAGGTCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: CIPTPTFPVERS*PLSSEFLGQRP
Trigger: AGGCCTTTGACCTAAAAACTCACTGGATAAAGGCAAAGACCTCTCCACTGGGAACGTGGGAGTTGGAATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS CAA 90 bp AGAAATATCTGTATTCCAACTCCCACGTTCCCAGTGGAGAGGTCTTaGCCTTTATCCAGTGAGTTTTTAGGTCAAAGGCCTAGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: RNICIPTPTFPVERS*PLSSEFLGQRPSSF
Trigger: AAAGGAGCTAGGCCTTTGACCTAAAAACTCACTGGATAAAGGCAAAGACCTCTCCACTGGGAACGTGGGAGTTGGAATACAGATATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472710.2
CDS TCA 72 bp TGTGTCCCCTGCAAATACAGTGAGCAAGCAATTCAGTaGCAAATGCCAAATGGACCAAAACCTTGTGACAAG +
Preference number: 6 (lower is better)
Translates to: CVPCKYSEQAIQ*QMPNGPKPCDK
Trigger: CTTGTCACAAGGTTTTGGTCCATTTGGCATTTGTCACTGAATTGCTTGCTCACTGTATTTGCAGGGGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS TCA 72 bp CTAACTTTCCCTGTTTTGTGTCCCCTGCAAATACAGTaGGCAAGCAATTCAGTGACAAATGCCAAATGGACC +
Preference number: 6 (lower is better)
Translates to: LTFPVLCPLQIQ*ASNSVTNAKWT
Trigger: GGTCCATTTGGCATTTGTCACTGAATTGCTTGCTCACTGTATTTGCAGGGGACACAAAACAGGGAAAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 90 bp CCATTCCATCATTGCCTCTGCACTTTATCAGTACCCAGCTTGTGTTaGTGTGCTATTCCTGCTTTTACCATGCAAAATCAGGCTAGCATT +
Preference number: 6 (lower is better)
Translates to: PFHHCLCTLSVPSLC*CAIPAFTMQNQASI
Trigger: AATGCTAGCCTGATTTTGCATGGTAAAAGCAGGAATAGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATGATGGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 90 bp CCAAATCCATTCCATCATTGCCTCTGCACTTTATCAGTACCCAGCTaGTGTTTGTGTGCTATTCCTGCTTTTACCATGCAAAATCAGGCT +
Preference number: 6 (lower is better)
Translates to: PNPFHHCLCTLSVPS*CLCAIPAFTMQNQA
Trigger: AGCCTGATTTTGCATGGTAAAAGCAGGAATAGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATGATGGAATGGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 90 bp ATCTCCGGAACTCCCATCCAGAATGATCTGCTTGAGTATTTCAGCTaGGTACATTTTGTTAATTCCGGCATCCTAGGTAAGAATCTAGCC +
Preference number: 6 (lower is better)
Translates to: ISGTPIQNDLLEYFS*VHFVNSGILGKNLA
Trigger: GGCTAGATTCTTACCTAGGATGCCGGAATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGAGTTCCGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS TCA 72 bp GATAAACTCCTAGATCAATTATACTTGGGTGTGGTATaGCTAAGGGGATGTTTCTTAGCAAAGCCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: DKLLDQLYLGVV*LRGCFLAKPPR
Trigger: CCGAGGAGGCTTTGCTAAGAAACATCCCCTTAGTCATACCACACCCAAGTATAATTGATCTAGGAGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617190.5
CDS GCA 72 bp GGGTGCTCATCTCCGGAACTCCCATCCAGAATGATCTaGTTGAGTATTTCAGCTTGGTACATTTTGTTAATT +
Preference number: 6 (lower is better)
Translates to: GCSSPELPSRMI*LSISAWYILLI
Trigger: AATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGAGTTCCGGAGATGAGCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496156.5
CDS CAA 72 bp CATTGCCTCTGCACTTTATCAGTACCCAGCTTGTGTTaGTGTGCTATTCCTGCTTTTACCATGCAAAATCAG +
Preference number: 6 (lower is better)
Translates to: HCLCTLSVPSLC*CAIPAFTMQNQ
Trigger: CTGATTTTGCATGGTAAAAGCAGGAATAGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 72 bp TTCCATCATTGCCTCTGCACTTTATCAGTACCCAGCTaGTGTTTGTGTGCTATTCCTGCTTTTACCATGCAA +
Preference number: 6 (lower is better)
Translates to: FHHCLCTLSVPS*CLCAIPAFTMQ
Trigger: TTGCATGGTAAAAGCAGGAATAGCACACAAACACAAGCTGGGTACTGATAAAGTGCAGAGGCAATGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS GCA 72 bp TTGACATGCTTATTTAGGAGCTGGTCAGTTCACTTCTaGCCAAGCAAAATGAACCATTTGGCATTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: LTCLFRSWSVHF*PSKMNHLALKR
Trigger: CCTTTTCAATGCCAAATGGTTCATTTTGCTTGGGCAGAAGTGAACTGACCAGCTCCTAAATAAGCATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS CAA 72 bp CCCAAGTCTTCTCTTTTTCAGGAAAAACATCTCCAGTaGTCCCAATGTGACTCACATAATGTGGCTTTGACT +
Preference number: 6 (lower is better)
Translates to: PKSSLFQEKHLQ*SQCDSHNVALT
Trigger: AGTCAAAGCCACATTATGTGAGTCACATTGGGACAACTGGAGATGTTTTTCCTGAAAAAGAGAAGACTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 90 bp GTCATGTTTCCCAAGTCTTCTCTTTTTCAGGAAAAACATCTCCAGTaGTCCCAATGTGACTCACATAATGTGGCTTTGACTTTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: VMFPKSSLFQEKHLQ*SQCDSHNVALTFSN
Trigger: ATTGGAGAAAGTCAAAGCCACATTATGTGAGTCACATTGGGACAACTGGAGATGTTTTTCCTGAAAAAGAGAAGACTTGGGAAACATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CCA 72 bp CTCGCTAAATGTTGGTGGTTATTTTTATCCTGTCAATaGCATCTCTGTCCAATCAAGAACAAGTCAAACTCA +
Preference number: 6 (lower is better)
Translates to: LAKCWWLFLSCQ*HLCPIKNKSNS
Trigger: TGAGTTTGACTTGTTCTTGATTGGACAGAGATGCCATTGACAGGATAAAAATAACCACCAACATTTAGCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CCA 72 bp AAAACAATGCCCAGCCATAATAAGCTCGCTAAATGTTaGTGGTTATTTTTATCCTGTCAATGGCATCTCTGT +
Preference number: 6 (lower is better)
Translates to: KTMPSHNKLAKC*WLFLSCQWHLC
Trigger: ACAGAGATGCCATTGACAGGATAAAAATAACCACCAACATTTAGCGAGCTTATTATGGCTGGGCATTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS TCA 72 bp AATTATTTGTACATAGTAGGTCCTCGATGTACGGGCTaGATGAAAGTGTTAATTCCCTATGCTTTTACACGA +
Preference number: 6 (lower is better)
Translates to: NYLYIVGPRCTG*MKVLIPYAFTR
Trigger: TCGTGTAAAAGCATAGGGAATTAACACTTTCATTCAGCCCGTACATCGAGGACCTACTATGTACAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS GCA 72 bp GTTGTGAAGATCATGCTTATAATCTGTTTAAAACAATaGCCAGCCATAATAAGCTCGCTAAATGTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: VVKIMLIICLKQ*PAIISSLNVGG
Trigger: ACCACCAACATTTAGCGAGCTTATTATGGCTGGGCATTGTTTTAAACAGATTATAAGCATGATCTTCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS GCA 72 bp TACTTTTTCATTTACCTAACATATTATGCCGCTTTCTaGCCCTGTACCTTTGTCATGCTGTTCTTTCCAATA +
Preference number: 6 (lower is better)
Translates to: YFFIYLTYYAAF*PCTFVMLFFPI
Trigger: TATTGGAAAGAACAGCATGACAAAGGTACAGGGGCAGAAAGCGGCATAATATGTTAGGTAAATGAAAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS CAA 90 bp TCCAATAGGAATGTCCTTTGTCATGCTGTTCTAATAGGAATGTCGTaGCCACTTTCAGTATATCAACTACTCATCTTTCAAGTATCACAT +
Preference number: 6 (lower is better)
Translates to: SNRNVLCHAVLIGMS*PLSVYQLLIFQVSH
Trigger: ATGTGATACTTGAAAGATGAGTAGTTGATATACTGAAAGTGGCAACGACATTCCTATTAGAACAGCATGACAAAGGACATTCCTATTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS CAA 90 bp TCATTGAAGTATTGGTGTATTCTATTAAATTTCATTTTGTTAGATTaGACCACTGCACCAACACCATCAAGAACTCTAGGAATCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SLKYWCILLNFILLD*TTAPTPSRTLGILA
Trigger: AGCCAGGATTCCTAGAGTTCTTGATGGTGTTGGTGCAGTGGTCAAATCTAACAAAATGAAATTTAATAGAATACACCAATACTTCAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469150.1
CDS CAA 72 bp AATGTCCTTTGTCATGCTGTTCTAATAGGAATGTCGTaGCCACTTTCAGTATATCAACTACTCATCTTTCAA +
Preference number: 6 (lower is better)
Translates to: NVLCHAVLIGMS*PLSVYQLLIFQ
Trigger: TTGAAAGATGAGTAGTTGATATACTGAAAGTGGCAACGACATTCCTATTAGAACAGCATGACAAAGGACATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469150.1
ENST00000472710.2
CDS CAA 72 bp TCATACTCCTTTATCCCTCATCCCGATACCATGCAATaGGAACTTTTAAAACTCATTGAAGTATTGGTGTAT +
Preference number: 6 (lower is better)
Translates to: SYSFIPHPDTMQ*ELLKLIEVLVY
Trigger: ATACACCAATACTTCAATGAGTTTTAAAAGTTCCAATTGCATGGTATCGGGATGAGGGATAAAGGAGTATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469150.1