RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC40 (Homo sapiens)

Ensembl gene IDs: ENSG00000066557

Ensembl transcript IDs: ENST00000370952.4

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp ACAGCCCTTGGGGTACCGAGGTACCGCAGTCTCTTCCACCTGCTTTaGAACCAGCGCGGAGATCCTGCCCCGCTATCCGCTTCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: TALGVPRYRSLFHLL*NQRGDPAPLSASGA
Trigger: CGCGCCTGAAGCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCCAAGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS GCA 90 bp CTTCAACAGCCCTTGGGGTACCGAGGTACCGCAGTCTCTTCCACCTaGTTTGAAACCAGCGCGGAGATCCTGCCCCGCTATCCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: LQQPLGYRGTAVSST*FETSAEILPRYPLQ
Trigger: CTGAAGCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCCAAGGGCTGTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS GCA 90 bp GTACCGCAGTCTCTTCCACCTGCTTTGAAACCAGCGCGGAGATCCTaGCCCGCTATCCGCTTCAGGCGCGACATGTTCAAAGTCCTAGGT +
Preference number: 5 (lower is better)
Translates to: VPQSLPPALKPARRS*PAIRFRRDMFKVLG
Trigger: ACCTAGGACTTTGAACATGTCGCGCCTGAAGCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CCA 90 bp ACACACTGCGGCACTTCACTGAGGTTTCTACCCGACAGGTTTAACTaGCCGCTCTTCCTCGCTGCCTTCAACAGCCCTTGGGGTACCGAG +
Preference number: 5 (lower is better)
Translates to: THCGTSLRFLPDRFN*PLFLAAFNSPWGTE
Trigger: CTCGGTACCCCAAGGGCTGTTGAAGGCAGCGAGGAAGAGCGGCCAGTTAAACCTGTCGGGTAGAAACCTCAGTGAAGTGCCGCAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS TCA 90 bp TCTGTCTGCTCCCACCATCTTTCAGTAGCACCAAACGAAAGATTCTaGTTAGCTTCCTCAGGGATATCCACATTTATTCTCCAGACACAC +
Preference number: 5 (lower is better)
Translates to: SVCSHHLSVAPNERF*LASSGISTFILQTH
Trigger: GTGTGTCTGGAGAATAAATGTGGATATCCCTGAGGAAGCTAATCAGAATCTTTCGTTTGGTGCTACTGAAAGATGGTGGGAGCAGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS GCA 90 bp TTGGAAAGTTGTTCAAATCCCTCTGATATGCAGGTTAATTCATTATaGTGGAGATACAGGCACTTCAGGTTTCTTAGGTTTGTAATTTCT +
Preference number: 5 (lower is better)
Translates to: LESCSNPSDMQVNSL*WRYRHFRFLRFVIS
Trigger: AGAAATTACAAACCTAAGAAACCTGAAGTGCCTGTATCTCCAGCATAATGAATTAACCTGCATATCAGAGGGATTTGAACAACTTTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CCA 90 bp GAAAGTTGTTCAAATCCCTCTGATATGCAGGTTAATTCATTATGCTaGAGATACAGGCACTTCAGGTTTCTTAGGTTTGTAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ESCSNPSDMQVNSLC*RYRHFRFLRFVISS
Trigger: TGAAGAAATTACAAACCTAAGAAACCTGAAGTGCCTGTATCTCCAGCATAATGAATTAACCTGCATATCAGAGGGATTTGAACAACTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CAA 90 bp AACAGCCCTTGGGGTACCGAGGTACCGCAGTCTCTTCCACCTGCTTaGAAACCAGCGCGGAGATCCTGCCCCGCTATCCGCTTCAGGCGC +
Preference number: 6 (lower is better)
Translates to: NSPWGTEVPQSLPPA*KPARRSCPAIRFRR
Trigger: GCGCCTGAAGCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCCAAGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS TCA 72 bp GGGGTACCGAGGTACCGCAGTCTCTTCCACCTGCTTTaGAACCAGCGCGGAGATCCTGCCCCGCTATCCGCT +
Preference number: 6 (lower is better)
Translates to: GVPRYRSLFHLL*NQRGDPAPLSA
Trigger: AGCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CAA 72 bp TGGGGTACCGAGGTACCGCAGTCTCTTCCACCTGCTTaGAAACCAGCGCGGAGATCCTGCCCCGCTATCCGC +
Preference number: 6 (lower is better)
Translates to: WGTEVPQSLPPA*KPARRSCPAIR
Trigger: GCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS GCA 72 bp CCCTTGGGGTACCGAGGTACCGCAGTCTCTTCCACCTaGTTTGAAACCAGCGCGGAGATCCTGCCCCGCTAT +
Preference number: 6 (lower is better)
Translates to: PLGYRGTAVSST*FETSAEILPRY
Trigger: ATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CCA 72 bp AACTGGCCGCTCTTCCTCGCTGCCTTCAACAGCCCTTaGGGTACCGAGGTACCGCAGTCTCTTCCACCTGCT +
Preference number: 6 (lower is better)
Translates to: NWPLFLAAFNSP*GTEVPQSLPPA
Trigger: AGCAGGTGGAAGAGACTGCGGTACCTCGGTACCCCAAGGGCTGTTGAAGGCAGCGAGGAAGAGCGGCCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS GCA 72 bp TCTCTTCCACCTGCTTTGAAACCAGCGCGGAGATCCTaGCCCGCTATCCGCTTCAGGCGCGACATGTTCAAA +
Preference number: 6 (lower is better)
Translates to: SLPPALKPARRS*PAIRFRRDMFK
Trigger: TTTGAACATGTCGCGCCTGAAGCGGATAGCGGGGCAGGATCTCCGCGCTGGTTTCAAAGCAGGTGGAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CCA 72 bp GGCACTTCACTGAGGTTTCTACCCGACAGGTTTAACTaGCCGCTCTTCCTCGCTGCCTTCAACAGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: GTSLRFLPDRFN*PLFLAAFNSPW
Trigger: CCAAGGGCTGTTGAAGGCAGCGAGGAAGAGCGGCCAGTTAAACCTGTCGGGTAGAAACCTCAGTGAAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CCA 72 bp GGTAGTGTCATGGCAGTCTCAGTAGCAGACTCACTTTaGCTAGGTCCATCATCTTTGATCTTGCTTCGTAGA +
Preference number: 6 (lower is better)
Translates to: GSVMAVSVADSL*LGPSSLILLRR
Trigger: TCTACGAAGCAAGATCAAAGATGATGGACCTAGCCAAAGTGAGTCTGCTACTGAGACTGCCATGACACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS TCA 72 bp TCCCACCATCTTTCAGTAGCACCAAACGAAAGATTCTaGTTAGCTTCCTCAGGGATATCCACATTTATTCTC +
Preference number: 6 (lower is better)
Translates to: SHHLSVAPNERF*LASSGISTFIL
Trigger: GAGAATAAATGTGGATATCCCTGAGGAAGCTAATCAGAATCTTTCGTTTGGTGCTACTGAAAGATGGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS TCA 72 bp TCTAGCTCTCTTATAGCAGAAGGAAGGGATGTCAACTaGTTATCATGTATATCAAGAACAGTCAGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SSSLIAEGRDVN*LSCISRTVSAG
Trigger: GCCTGCACTGACTGTTCTTGATATACATGATAATCAGTTGACATCCCTTCCTTCTGCTATAAGAGAGCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CCA 72 bp TCAAATCCCTCTGATATGCAGGTTAATTCATTATGCTaGAGATACAGGCACTTCAGGTTTCTTAGGTTTGTA +
Preference number: 6 (lower is better)
Translates to: SNPSDMQVNSLC*RYRHFRFLRFV
Trigger: TACAAACCTAAGAAACCTGAAGTGCCTGTATCTCCAGCATAATGAATTAACCTGCATATCAGAGGGATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS TCA 72 bp GCCAGCCAATTCAGGAGGTATAGTTTCCAAGAGATTTaGATTACAATCCAAATGCTTCAACCTTTTCATTCT +
Preference number: 6 (lower is better)
Translates to: ASQFRRYSFQEI*ITIQMLQPFHS
Trigger: AGAATGAAAAGGTTGAAGCATTTGGATTGTAATTCAAATCTCTTGGAAACTATACCTCCTGAATTGGCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS GCA 72 bp CTTCTAAATTGGAAAGTTGTTCAAATCCCTCTGATATaGAGGTTAATTCATTATGCTGGAGATACAGGCACT +
Preference number: 6 (lower is better)
Translates to: LLNWKVVQIPLI*RLIHYAGDTGT
Trigger: AGTGCCTGTATCTCCAGCATAATGAATTAACCTGCATATCAGAGGGATTTGAACAACTTTCCAATTTAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370952.4
CDS CAA 90 bp TCCAAGGACCGTAGTAGTATAATTTCATCTGGAACAGATTTTAACTaGTTATCCCTCAGGTCTAGCACAAGAATTGAATTCAGATGTTTA +
Preference number: 6 (lower is better)
Translates to: SKDRSSIISSGTDFN*LSLRSSTRIEFRCL
Trigger: TAAACATCTGAATTCAATTCTTGTGCTAGACCTGAGGGATAACAAGTTAAAATCTGTTCCAGATGAAATTATACTACTACGGTCCTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370952.4