RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000128594

Ensembl transcript IDs: ENST00000249363.4, ENST00000476782.5, ENST00000478726.1, ENST00000494115.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTTTCTAAGCAATTCTGTCAGGCAAGGCACATGTGTGTCCAGTaGACAGACCCCCAAGACTTGTGCACATGGACAAAGACTCAGCCC +
Preference number: 1 (lower is better)
Translates to: LLSKQFCQARHMCVQ*TDPQDLCTWTKTQP
Trigger: GGGCTGAGTCTTTGTCCATGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACAGAATTGCTTAGAAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 90 bp GAGGGAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTaGAACTCCATGTGTGCATGCGTGTCACTTGTAACTGTGGATCTC +
Preference number: 1 (lower is better)
Translates to: EGSFPSVCSIQQYPM*NSMCACVSLVTVDL
Trigger: GAGATCCACAGTTACAAGTGACACGCATGCACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 90 bp TCAGAGTCCAGGAACAACAGGTGGACATGGCACAATGCTAATTTATaGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: SESRNNRWTWHNANL*PPVNTFSLLYPPFP
Trigger: TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGCATTGTGCCATGTCCACCTGTTGTTCCTGGACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR TCA 90 bp ATCCCTAATGAATCAGCATTTAGAAGAGTCACCAAATCACAAGCATaGGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: IPNESAFRRVTKSQA*EKLPLPSSPIQASP
Trigger: AGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTCTTCTAAATGCTGATTCATTAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 90 bp GCCATCATTGTCTACAATCATGTGTCAGAGTCCAGGAACAACAGGTaGACATGGCACAATGCTAATTTATGGCCTCCTGTGAATACATTC +
Preference number: 1 (lower is better)
Translates to: AIIVYNHVSESRNNR*TWHNANLWPPVNTF
Trigger: GAATGTATTCACAGGAGGCCATAAATTAGCATTGTGCCATGTCCACCTGTTGTTCCTGGACTCTGACACATGATTGTAGACAATGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 90 bp ATTGTCTACAATCATGTGTCAGAGTCCAGGAACAACAGGTGGACATaGCACAATGCTAATTTATGGCCTCCTGTGAATACATTCTCTCTG +
Preference number: 1 (lower is better)
Translates to: IVYNHVSESRNNRWT*HNANLWPPVNTFSL
Trigger: CAGAGAGAATGTATTCACAGGAGGCCATAAATTAGCATTGTGCCATGTCCACCTGTTGTTCCTGGACTCTGACACATGATTGTAGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR TCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGTGAAAGCATTAGACTaGGAGCTACGCCAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSVKALD*ELRQLP
Trigger: CGGGAGCTGGCGTAGCTCTCAGTCTAATGCTTTCAC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR GCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCCACATGTGTGTCCAGTaGACAGACCCCCAAGACTTG +
Preference number: 2 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSHMCVQ*TDPQDL
Trigger: CAAGTCTTGGGGGTCTGTGCACTGGACACACATGTG...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCCAAGACTTGTGCACATaGACAAAGACTCAGCCCCTT +
Preference number: 2 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSQDLCT*TKTQPL
Trigger: AAGGGGCTGAGTCTTTGTCCATGTGCACAAGTCTTG...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR TCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTCCTCCTGGGAAACCCTaGATAGACACATGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: GKGFITLREPVPFSSLPFPPGKP*IDTCLA
Trigger: TGCAAGGCATGTGTCTATTCAGGGTTTCCCAGGAGG...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCACCAGAAATCCCTTCTaGCAGCATAGCAAGTTAACT +
Preference number: 2 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSTRNPF*QHSKLT
Trigger: AGTTAACTTGCTATGCTGCCAGAAGGGATTTCTGGT...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAACATGCCTTGCAGAGTaGGTTAAGCCCAACTGCAGG +
Preference number: 2 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPTCLAE*VKPNCR
Trigger: CCTGCAGTTGGGCTTAACCCACTCTGCAAGGCATGT...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCAACAACAGGTGGACATaGCACAATGCTAATTTATGG +
Preference number: 2 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSNNRWT*HNANLW
Trigger: CCATAAATTAGCATTGTGCCATGTCCACCTGTTGTT...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR TCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGATTTATGGCCTCCTGTaGATACATTCTCTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVIYGLL*IHSLCF
Trigger: AAAGCAGAGAGAATGTATTCACAGGAGGCCATAAAT...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR GCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTTGGGTTAAGCCCAACTaGAGGAATCTGGTGCAATGT +
Preference number: 2 (lower is better)
Translates to: GKGFITLREPVPFSSLPFWVKPN*RNLVQC
Trigger: ACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCA...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTTTTGTGAACCATCCTaGTTGGGAAAGGCTTCATTA +
Preference number: 2 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVFCEPS*LGKASL
Trigger: TAATGAAGCCTTTCCCAACCAGGATGGTTCACAAAA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR GCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCACTCTGTACAAAAGTTaGTGTCTTTGTGTGCATTCT +
Preference number: 2 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFTLYKS*CLCVHS
Trigger: AGAATGCACACAAAGACAGCAACTTTTGTACAGAGT...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGTTGCCACTATCATTTTaGCACAGTACAAATTCATGG +
Preference number: 2 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLLPLSF*HSTNSW
Trigger: CCATGAATTTGTACTGTGCCAAAATGATAGTGGCAA...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGGTTCGTTTGAATTTTaGTGGTTTTCCTGCTTAAAA +
Preference number: 2 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCGSFEF*WFSCLK
Trigger: TTTTAAGCAGGAAAACCACCAAAATTCAAACGAACC...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGCATCACCACAACCAGTaGACATCCGCTGTAATAATC +
Preference number: 3 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVHHHNQ*TSAVII
Trigger: GATTATTACAGCGGATGTCAACTGGTTGTGGTGATG...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR TCA 72 bp ACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTaGGAGCTACGCCAGCTCCCGTCCTTCTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: TAGIWCNVKALD*ELRQLPSFSAP
Trigger: AGGAGCAGAGAAGGACGGGAGCTGGCGTAGCTCTCAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGTTCAGTCTATCCCTCTaGCCCCCTCAGCAGCCCACA +
Preference number: 3 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLFSLSL*PPQQPT
Trigger: TGTGGGCTGCTGAGGGGGCAAGAGGGATAGACTGAA...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR GCA 72 bp AAGCAATTCTGTCAGGCAAGGCACATGTGTGTCCAGTaGACAGACCCCCAAGACTTGTGCACATGGACAAAG +
Preference number: 3 (lower is better)
Translates to: KQFCQARHMCVQ*TDPQDLCTWTK
Trigger: CTTTGTCCATGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACAGAATTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR GCA 72 bp CTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTaGATGCGTGTCACTTGTAACTGTGGATCTCACAGC +
Preference number: 3 (lower is better)
Translates to: LHSTVPHVELHV*MRVTCNCGSHS
Trigger: GCTGTGAGATCCACAGTTACAAGTGACACGCATGCACACATGGAGTTCCACATGGGGTACTGTTGAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCACAGACCCCCAAGACTaGTGCACATGGACAAAGACT +
Preference number: 3 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFTDPQD*CTWTKT
Trigger: AGTCTTTGTCCATGTGCACAAGTCTTGGGGGTCTGT...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 72 bp TTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTaGAACTCCATGTGTGCATGCGTGTCACTTGTAACT +
Preference number: 3 (lower is better)
Translates to: FPSVCSIQQYPM*NSMCACVSLVT
Trigger: AGTTACAAGTGACACGCATGCACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGCACTCTGTACAAAAGTaGCTGTCTTTGTGTGCATTC +
Preference number: 3 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVHSVQK*LSLCAF
Trigger: GAATGCACACAAAGACAGCAACTTTTGTACAGAGTG...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAAAGTTAACTTGTGGCTaGTACCCCACAACGTTCCCA +
Preference number: 3 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPKLTCG*YPTTFP
Trigger: TGGGAACGTTGTGGGGTACAAGCCACAAGTTAACTT...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR GCA 72 bp ATAGACACATGCCTTGCAGAGTGGGTTAAGCCCAACTaGAGGAATCTGGTGCAATGTGAAAGCATTAGACTG +
Preference number: 3 (lower is better)
Translates to: IDTCLAEWVKPN*RNLVQCESIRL
Trigger: CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTCTGCAAGGCATGTGTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 72 bp GTCTACAATCATGTGTCAGAGTCCAGGAACAACAGGTaGACATGGCACAATGCTAATTTATGGCCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: VYNHVSESRNNR*TWHNANLWPPV
Trigger: CACAGGAGGCCATAAATTAGCATTGTGCCATGTCCACCTGTTGTTCCTGGACTCTGACACATGATTGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR TCA 72 bp AACCATCCTGGTTGGGAAAGGCTTCATTACTTTACGTaGGCCTGTACCCTTTTCGTCTCTCCCTTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: NHPGWERLHYFT*ACTLFVSPFSL
Trigger: CAAAGAAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCCAACCAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCCCTTTAAGGGTTCGTTaGAATTTTGGTGGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFPLRVR*NFGGFP
Trigger: AGGAAAACCACCAAAATTCAAACGAACCCTTAAAGG...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR-3UTR CAA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTCATAAAATGCCATCATaGTCTACAATCATGTGTCAG +
Preference number: 3 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCHKMPS*STIMCQ
Trigger: CTGACACATGATTGTAGACAATGATGGCATTTTATG...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 72 bp AGGAACAACAGGTGGACATGGCACAATGCTAATTTATaGCCTCCTGTGAATACATTCTCTCTGCTTTACCCT +
Preference number: 3 (lower is better)
Translates to: RNNRWTWHNANL*PPVNTFSLLYP
Trigger: AGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGCATTGTGCCATGTCCACCTGTTGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
3UTR CCA 72 bp AATCATGTGTCAGAGTCCAGGAACAACAGGTGGACATaGCACAATGCTAATTTATGGCCTCCTGTGAATACA +
Preference number: 3 (lower is better)
Translates to: NHVSESRNNRWT*HNANLWPPVNT
Trigger: TGTATTCACAGGAGGCCATAAATTAGCATTGTGCCATGTCCACCTGTTGTTCCTGGACTCTGACACATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGCAGTCCGGGCGGCTGTaGCTGTACTCCGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVQSGRL*LYSAAG
Trigger: ACCAGCAGCGGAGTACAGTCACAGCCGCCCGGACTG...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGTACTGCCCCCTCACCTaGTACACCGGACGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVYCPLT*YTGRSC
Trigger: GCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAGTA...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGTCCACACTTGCGCCGTaGGGTAGACGAACGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVSTLAP*GRRTGA
Trigger: TGCTCCCGTTCGTCTACCTCACGGCGCAAGTGTGGA...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAGGGAGGGCACCCGGTTaGAGGCGTAAGAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTGRAPG*RRKRGC
Trigger: GCATCCCCTCTTACGCCTTCAACCGGGTGCCCTCCC...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGGAGTTGAGGCGCGCCTaGGAGAGCCAAGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVELRRA*ESQGPA
Trigger: CGCCGGGCCTTGGCTCTCCCAGGCGCGCCTCAACTC...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAGGGTGGCGGGAGGCGTaGCTGAGCACTGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTGWREA*LSTVPL
Trigger: CAATGGGACAGTGCTCAGCCACGCCTCCCGCCACCC...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGGTGACTGTACTCCGCTaGTGGTGCCGCTTACGAAGT +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVVTVLR*WCRLRS
Trigger: ACTTCGTAAGCGGCACCAGCAGCGGAGTACAGTCAC...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGTGCTGCTGCGGATGTTaGTGCTGGGATGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVCCCGC*CWDVFV
Trigger: GACGAAGACATCCCAGCAGCAACATCCGCAGCAGCA...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACATTTGTCCTTGGACCCTaGCACCGGCTCGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTFVLGP*HRLAPA
Trigger: GGCTGGAGCGAGCCGGTGCCAGGGTCCAAGGACAAA...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCTCCCGGCTTTGTCCTTaGACCCTGGCACCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSSRLCP*TLAPAR
Trigger: GCGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGA...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAGCGAAGCCGCGGAGTTaGGGCGCGCCTGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPAKPRS*GAPGRA
Trigger: GGCTCTCCCAGGCGCGCCTCAACTCCGCGGCTTCGC...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCGCCGCACTCGCTGGATaGTGCGCTCCCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFAALAG*CAPSPG
Trigger: GCCGGGAGAGGGAGCGCAGCATCCAGCGAGTGCGGC...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGCCCCCACCTCAATCTaGCGGATGGAGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSAPTSI*RMEFLP
Trigger: GGGCAGGAACTCCATCCGGCAGATTGAGGTGGGGGC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGCGGGTACTGCCACCTaGTTGGGCACACGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSAGTAT*LGTRVV
Trigger: GACTACCCGTGTGCCCAAGCAGGTGGCAGTACCCGC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGGCCTCGCATGTGCATaGGAGCATGACAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSGLACA*EHDSGH
Trigger: GTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACATCTCCTGAGGGGGCCTaGGAGAGGGAAGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTSPEGA*EREASH
Trigger: ATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGA...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGCAGCCGTGCTCACATTaGGGTAGGCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVQPCSH*GRPRRW
Trigger: CCAACGCCTCGGCCTACCTCAATGTGAGCACGGCTG...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAGGCACACGGGTAGTCTaGATGAGCACCGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTGTRVV*MSTVVE
Trigger: CTCTACCACGGTGCTCATTCAGACTACCCGTGTGCC...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTGCTTCATCGCCAAAGTaGGCTCCGGCGGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFASSPK*APAAPA
Trigger: GGCCGGGGCCGCCGGAGCGCACTTTGGCGATGAAGC...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAGTTGAGGTCTCGAGGTaGGTCCATGATGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTVEVSR*VHDEGG
Trigger: GCCCCCTTCATCATGGACGCACCTCGAGACCTCAAC...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGTGGTGACTGTGGGGTaGAGAGAGTTCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSVVTVG*REFPRL
Trigger: CAGCCTGGGGAACTCTCTGCACCCCACAGTCACCAC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCCCAGGCCGCACTCGCTaGATGCTGCGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFPGRTR*MLRSLS
Trigger: GGAGAGGGAGCGCAGCATCCAGCGAGTGCGGCCTGG...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTACGGAGGGGCAGTTCTaGGGCCCGGCTGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFTEGQF*GPAEAA
Trigger: TGCCGCCTCAGCCGGGCCCCAGAACTGCCCCTCCGT...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGTGGGTTAAGCCCAACTaGAGGAATCTGGTGCAATGT +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVWVKPN*RNLVQC
Trigger: ACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCA...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGCAAGACTTGTGCACATaGACAAAGACTCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVQDLCT*TKTQPL
Trigger: AAGGGGCTGAGTCTTTGTCCATGTGCACAAGTCTTG...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAGTACACCCCAGTGTCTaGAAGCAGCACGTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTVHPSV*KQHVGK
Trigger: TTTTCCCACGTGCTGCTTTCAGACACTGGGGTGTAC...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGCCGGATGGAGTTCCTaGCCAACTGCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCAGWSS*PTAGPP
Trigger: TGGAGGTCCTGCAGTTGGGCAGGAACTCCATCCGGC...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTTCCAGGTGGTGGAGGTaGCGGAAGGTGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFSRWWR*RKVSAW
Trigger: CCAGGCCGACACCTTCCGCCACCTCCACCACCTGGA...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGACAGAGATCCTTGGGTaGCGGGAGGCGTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLTEILG*REAWLS
Trigger: GCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGT...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGGAGGACAGAGATCCTTaGGTGGCGGGAGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLEDRDP*VAGGVA
Trigger: AGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTC...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGTTCGAGGGAATACCCTaGGGGACCTCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWFEGIP*GTSERP
Trigger: GGGCCTCTCCGAGGTCCCGCAGGGTATTCCCTCGAA...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAGTCTGTCGCGGGTACTaGCACCTGCTTGGGCACACG +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPVCRGY*HLLGHT
Trigger: CGTGTGCCCAAGCAGGTGGCAGTACCCGCGACAGAC...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCCCAGTGGGCCCCATGTaGTGGTTTGTAGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSPVGPM*WFVGVV
Trigger: TACAACACCTACAAACCAGCACATGGGGCCCACTGG...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAGTGGGGGAGACAAAATaGCCTCTAGTAAATCCGGAG +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTVGETK*PLVNPE
Trigger: CTCCGGATTTACTAGAGGCCATTTTGTCTCCCCCAC...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAAGGACCTCCAGGTGGTaGAGGTGGCGGAAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPRTSRW*RWRKVS
Trigger: CGACACCTTCCGCCACCTCCACCACCTGGAGGTCCT...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGCAGGCGAGATCTCCGTaGTCTCCACTGTTACTGTGG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVQARSP*SPLLLW
Trigger: CCACAGTAACAGTGGAGACCACGGAGATCTCGCCTG...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAACTGTACTCCGCTGCTaGTGCCGCTTACGAAGTTTA +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTTVLRC*CRLRSL
Trigger: TAAACTTCGTAAGCGGCACCAGCAGCGGAGTACAGT...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTGCGGATGTTGCTGCTaGGATGTCTTCGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVCGCCC*DVFVHL
Trigger: CAGGTGGACGAAGACATCCCAGCAGCAACATCCGCA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAATGTGCATGGGAGCATaGCAGCGGCCACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPMCMGA*QRPQQV
Trigger: CACCTGCTGTGGCCGCTGTCATGCTCCCATGCACAT...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGAAAGCATTAGACTaGGAGCTACGCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCVKALD*ELRQLP
Trigger: CGGGAGCTGGCGTAGCTCTCAGTCTAATGCTTTCAC...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGCCTCCTGGGAAACCCTaGATAGACACATGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVPPGKP*IDTCLA
Trigger: TGCAAGGCATGTGTCTATTCAGGGTTTCCCAGGAGG...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp CTCTTCCACCTTCTCCTGAGGGGGCCTGGGAGAGGGAAGCTTCCCATCAGTGTGATTTATGGCCTCCTGTaGATACATTCTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFHLLLRGPGRGKLPISVIYGLL*IHSLCF
Trigger: AAAGCAGAGAGAATGTATTCACAGGAGGCCATAAAT...CACACTGATGGGAAGCTTCCCTCTCCCAGGCCCCCTCAGGAGAAGGTGGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAGAGTTCCTGCCCAACTaGAGGACCTCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPEFLPN*RTSRWW
Trigger: CCACCACCTGGAGGTCCTGCAGTTGGGCAGGAACTC...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTGGACGGAGCTGCTGTTaGTGCTGCGGATGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFGRSCC*CCGCCC
Trigger: GCAGCAACATCCGCAGCAGCAACAGCAGCTCCGTCC...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFFLHGS*APRSHS
Trigger: GGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAA...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGCGAACGGGAGCAGGATaGCATTCCAGGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLRTGAG*HSRCGG
Trigger: ACCACCACACCTGGAATGCCATCCTGCTCCCGTTCG...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCCAGTTCCAAGGGTTGTaGTGTAGATGCAACTCCACC +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSQFQGL*CRCNST
Trigger: GGTGGAGTTGCATCTACACCACAACCCTTGGAACTG...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGTGCACACCACCTTGCTaGACTGGTTACTGCACGAGC +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLCTPPC*TGYCTS
Trigger: GCTCGTGCAGTAACCAGTTCAGCAAGGTGGTGTGCA...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGAATCAGGCTGACCTGTaGGTTCATGACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVNQADL*VHDPEL
Trigger: AAGCTCTGGGTCATGAACTCACAGGTCAGCCTGATT...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGGACCCTCAGAAATGTTaGGGTCTCGAGGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLDPQKC*GLEVRP
Trigger: TGGACGCACCTCGAGACCTCAACATTTCTGAGGGTC...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTCTTGGTGGTCTTCATaGCTTCATCCAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVSWWSS*LHPGWS
Trigger: AGACCAGCCTGGATGAAGTCATGAAGACCACCAAGA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCGGCAGCAGCGATGGCTaGACACAGAATCCACACTTG +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFGSSDG*TQNPHL
Trigger: CAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCC...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGGGTTGTGGTGTAGATaGAACTCCACCAGGTACCTC +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCGLWCR*NSTRYL
Trigger: GAGGTACCTGGTGGAGTTGCATCTACACCACAACCC...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGGCGTTGGAGTTGCCTaGAACATTGGTCACCATGCA +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCGVGVA*NIGHHA
Trigger: TGCATGGTGACCAATGTTGCAGGCAACTCCAACGCC...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAAACTCCATGTGTGCATaGGTGTCACTTGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTNSMCA*VSLVTV
Trigger: CACAGTTACAAGTGACACGCATGCACACATGGAGTT...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGTGGAACTCCATGTGTaGATGCGTGTCACTTGTAAC +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSVELHV*MRVTCN
Trigger: GTTACAAGTGACACGCATGCACACATGGAGTTCCAC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTAGGCGGCAGCAGCGATaGCTGCACACAGAATCCACA +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFRRQQR*LHTEST
Trigger: TGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCCT...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTCGGCCTGGATCATCTaGATGTTGTTCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVSAWII*MLFSMR
Trigger: CCTCATGGAGAACAACATCCAGATGATCCAGGCCGA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGGGGTAAAGAGGTCATaGGGCAAAGAAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSGVKRS*GKEERL
Trigger: TAACCTCTCTTCTTTGCCCCATGACCTCTTTACCCC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTCTGAAAGCAGCACGTaGGAAAAGTTCAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVSESST*EKFKVP
Trigger: CGGCACCTTGAACTTTTCCCACGTGCTGCTTTCAGA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTGGTAGGCCGAGGCGTTaGAGTTGCCTGCAACATTGG +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFGRPRR*SCLQHW
Trigger: CCAATGTTGCAGGCAACTCCAACGCCTCGGCCTACC...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTATGGTCATGAATTGTaGGCAGCACTACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVYGHEL*AALLPP
Trigger: AGGGGGCAGTAGTGCTGCCCACAATTCATGACCATA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGGTGGGCCCCATGTGCTaGTTTGTAGGTGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVVGPMC*FVGVVV
Trigger: AACTACAACACCTACAAACCAGCACATGGGGCCCAC...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTCTGTTTTCTGTCCAGTaGGCCCCATGTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCLFSVQ*APCAGL
Trigger: CAAACCAGCACATGGGGCCCACTGGACAGAAAACAG...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTACATGCCTTGCAGAGTaGGTTAAGCCCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCTCLAE*VKPNCR
Trigger: CCTGCAGTTGGGCTTAACCCACTCTGCAAGGCATGT...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCACTACCCCGGCTTAAGTaGGCTAGGAGCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPLPRLK*ARSSSF
Trigger: GAAAGAGGAGCTCCTAGCTCACTTAAGCCGGGGTAG...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTTCAAGGTGCCGTCGTTaGGGACAGAGATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFSRCRR*GQRSLG
Trigger: ACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGA...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGCCGAGGCGTTGGAGTTaGCTGCAACATTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWPRRWS*LQHWSP
Trigger: TGGTGACCAATGTTGCAGGCAACTCCAACGCCTCGG...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTAGCTGCTGTTGCTGCTaGGGATGTTGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFSCCCC*GCCCWD
Trigger: ATCCCAGCAGCAACATCCGCAGCAGCAACAGCAGCT...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGACCCCCAAGACTTGTaGACATGGACAAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCDPQDL*TWTKTQ
Trigger: CTGAGTCTTTGTCCATGTGCACAAGTCTTGGGGGTC...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGCCACAAGAGCTTCATaGTGTGGCACGTTCATAATT +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSATRAS*CGTFII
Trigger: AATTATGAACGTGCCACACCATGAAGCTCTTGTGGC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGGCATTCCAGGTGTGGTaGTGCACAGTTACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWAFQVW*CTVTCH
Trigger: GTGGCAGGTAACTGTGCACCACCACACCTGGAATGC...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCATGGCATTCCAGGTGTaGTGGTGCACAGTTACCTGC +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFMAFQV*WCTVTC
Trigger: GCAGGTAACTGTGCACCACCACACCTGGAATGCCAT...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGAAGAGAGGTTATTGTaGGCCAAGTTGAGTTCCACA +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSEERLL*AKLSST
Trigger: TGTGGAACTCAACTTGGCCCACAATAACCTCTCTTC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGTCTGCATCTTGTCAGTaGTGTCTGTCGCGGGTACTG +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLSASCQ*CLSRVL
Trigger: CAGTACCCGCGACAGACACCACTGACAAGATGCAGA...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAACCAGAAATCCCTTCTaGCAGCATAGCAAGTTAACT +
Preference number: 4 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTTRNPF*QHSKLT
Trigger: AGTTAACTTGCTATGCTGCCAGAAGGGATTTCTGGT...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCTCCAGGAACAACAGGTaGACATGGCACAATGCTAAT +
Preference number: 4 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSSRNNR*TWHNAN
Trigger: ATTAGCATTGTGCCATGTCCACCTGTTGTTCCTGGA...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGCCACTGTTACTGTGGTaGAGAAGCTGTAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLPLLLW*RSCSWR
Trigger: CCTCCAACTACAGCTTCTTCACCACAGTAACAGTGG...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCATTCCAGGTGTGGTGGTaGACAGTTACCTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPFQVWW*TVTCHK
Trigger: CTTGTGGCAGGTAACTGTGCACCACCACACCTGGAA...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAGGTAGAGGTGGTATATaGCGGCTGGTAACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPGRGGI*RLVTSG
Trigger: TCCACTGGTTACCAGCCGGCATATACCACCTCTACC...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCACACATGTGTGTCCAGTaGACAGACCCCCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPHMCVQ*TDPQDL
Trigger: CAAGTCTTGGGGGTCTGTGCACTGGACACACATGTG...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTCGGAAGGTGTCGGCCTaGATCATCTGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKGFITLREPVPFSSLPFRKVSA*IIWMLF
Trigger: GAACAACATCCAGATGATCCAGGCCGACACCTTCCG...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGAGCGGCCACAGCAGGTaGAATTGGTGGGTATATACT +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLSGHSR*NWWVYT
Trigger: AGTATATACCCACCAATTCCACCTGCTGTGGCCGCT...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTAGAAGACAATCAACATaGCGGCAGCTAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCRRQST*RQLAES
Trigger: TGACTCTGCTAGCTGCCGCCATGTTGATTGTCTTCT...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGGAGGGGAGTCATATTTaGGTTTCCTGTACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLEGSHI*VSCTLS
Trigger: GGACAAGGTACAGGAAACTCAAATATGACTCCCCTC...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCCAACATTGGTCACCATaGATGTGTACACCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFQHWSP*MCTPQC
Trigger: ACACTGGGGTGTACACATGCATGGTGACCAATGTTG...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCATCATCCAGGCTGGTCTaGATCTTGTCAGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPSSRLV*ILSVVS
Trigger: AGACACCACTGACAAGATGCAGACCAGCCTGGATGA...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCGCTCCCGTCCTTCTCTaGTCCTTTCTAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFAPVLL*SFLSNS
Trigger: AGAATTGCTTAGAAAGGAGCAGAGAAGGACGGGAGC...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGAGCTTCCCATCAGTGTaGTCCATTCAACAGTACCCC +
Preference number: 4 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWSFPSV*SIQQYP
Trigger: GGGGTACTGTTGAATGGAGCACACTGATGGGAAGCT...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCATGTCTTCGTCCACCTaGATTATCTCAACAGTCCGG +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFMSSST*IISTVR
Trigger: CCGGACTGTTGAGATAATCCAGGTGGACGAAGACAT...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCCTTCATTACTTTACGTaGGCCTGTACCCTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFLHYFT*ACTLFV
Trigger: GACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAG...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGAACAACAGGTGGACATaGCACAATGCTAATTTATGG +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVNNRWT*HNANLW
Trigger: CCATAAATTAGCATTGTGCCATGTCCACCTGTTGTT...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGACTCTGTACAAAAGTTaGTGTCTTTGTGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVTLYKS*CLCVHS
Trigger: AGAATGCACACAAAGACAGCAACTTTTGTACAGAGT...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCACACAGCAGGTGGAATTaGTGGGTATATACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPHSRWN*WVYTLE
Trigger: TTCGAGAGTATATACCCACCAATTCCACCTGCTGTG...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGACTGCAGGAATCTGGTaGAATGTGAAAGCATTAGAC +
Preference number: 4 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWTAGIW*NVKALD
Trigger: GTCTAATGCTTTCACATTGCACCAGATTCCTGCAGT...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAAAGAGCTTCATGGTGTaGCACGTTCATAATTCACCA +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPKSFMV*HVHNSP
Trigger: TGGTGAATTATGAACGTGCCACACCATGAAGCTCTT...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAGTGAACCATCCTGGTTaGGAAAGGCTTCATTACTTT +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPVNHPG*ERLHYF
Trigger: AAAGTAATGAAGCCTTTCCCAACCAGGATGGTTCAC...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGTTTTGTGAACCATCCTaGTTGGGAAAGGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLFCEPS*LGKASL
Trigger: TAATGAAGCCTTTCCCAACCAGGATGGTTCACAAAA...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCGTTGAGTTCCACAAGTaGAGCCAGCCCGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSVEFHK*SQPVKS
Trigger: GCTTTTGACGGGCTGGCTTCACTTGTGGAACTCAAC...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCACTTCCCCTTAGCCTCTaGAGAAAAATATTATTGCCA +
Preference number: 4 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPLPLSL*RKILLP
Trigger: TGGCAATAATATTTTTCTTCAGAGGCTAAGGGGAAG...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCAATAACAGAGATCTCTaGCTTCCCCACCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSNNRDL*LPHPRP
Trigger: TGGGCGTGGGTGGGGAAGGCAGAGATCTCTGTTATT...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTAGTTACATCATTAGATaGACCAGAATAACAGAGATC +
Preference number: 4 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCSYIIR*TRITEI
Trigger: GATCTCTGTTATTCTGGTCCATCTAATGATGTAACT...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCAAGGCAGGAAAGCACTaGCGTGGTGTCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSKAGKH*RGVLKL
Trigger: AAGCTTAAGGACACCACGCCAGTGCTTTCCTGCCTT...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGTTGCCACTATCATTTTaGCACAGTACAAATTCATGG +
Preference number: 4 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWLPLSF*HSTNSW
Trigger: CCATGAATTTGTACTGTGCCAAAATGATAGTGGCAA...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCCAACAGTACCCCATGTaGAACTCCATGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSQQYPM*NSMCAC
Trigger: GCATGCACACATGGAGTTCCACATGGGGTACTGTTG...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR TCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCTATTGTGGGCCAAGTTaGGTTCCACAAGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSYCGPS*VPQVKP
Trigger: TGGCTTCACTTGTGGAACTCAACTTGGCCCACAATA...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR GCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCCCGACACTTAAGTTCTaGCATCCGACCCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSPTLKF*HPTLRN
Trigger: ATTTCTGAGGGTCGGATGGCAGAACTTAAGTGTCGG...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCAGCAGGTGGAATTGGTaGGTATATACTCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSSRWNW*VYTLEA
Trigger: GGCTTCGAGAGTATATACCCACCAATTCCACCTGCT...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCCCTGTACCTTGTCCTTaGTATGGGTCTGAATTATAT +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSPVPCP*YGSELY
Trigger: ATATAATTCAGACCCATACCAAGGACAAGGTACAGG...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CCA 90 bp CCCACACCCTACCTCTTTAAGGATGTTTGTTGTTTTAGTTTATTTTATCTCAGCGGTTCGTTTGAATTTTaGTGGTTTTCCTGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PTPYLFKDVCCFSLFYLSGSFEF*WFSCLK
Trigger: TTTTAAGCAGGAAAACCACCAAAATTCAAACGAACC...GCTGAGATAAAATAAACTAAAACAACAAACATCCTTAAAGAGGTAGGGTGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 90 bp CACCGGCTCGCTCCAGCCGCGGGGGAAGGCGCTTCATCGCCAAAGTaGGCTCCGGCGGCCCCGGCCCGCTCTGCGGGCCGCCGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: HRLAPAAGEGASSPK*APAAPARSAGRRRR
Trigger: CCTCCGGCGGCGGCCCGCAGAGCGGGCCGGGGCCGCCGGAGCGCACTTTGGCGATGAAGCGCCTTCCCCCGCGGCTGGAGCGAGCCGGTG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CAAGGAGCGGCGCCACCAGCGCTTCCCGGCTTTGTCCTTGGACCCTaGCACCGGCTCGCTCCAGCCGCGGGGGAAGGCGCTTCATCGCCA +
Preference number: 5 (lower is better)
Translates to: QGAAPPALPGFVLGP*HRLAPAAGEGASSP
Trigger: TGGCGATGAAGCGCCTTCCCCCGCGGCTGGAGCGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGAAGCGCTGGTGGCGCCGCTCCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 90 bp TGGCCTCTAGTAAATCCGGAGCCGGAGCCGGCGAAGCCGCGGAGTTaGGGCGCGCCTGGGAGAGCCAAGGCCCGGCGGGCTATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: WPLVNPEPEPAKPRS*GAPGRAKARRAMQV
Trigger: CACCTGCATAGCCCGCCGGGCCTTGGCTCTCCCAGGCGCGCCTCAACTCCGCGGCTTCGCCGGCTCCGGCTCCGGATTTACTAGAGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 90 bp CTGGTTACTGCACGAGCAGACGGAGGGGCAGTTCTGGGGCCCGGCTaGGGCGGCAGCAGCGATGGCTGCACACAGAATCCACACTTGCGC +
Preference number: 5 (lower is better)
Translates to: LVTARADGGAVLGPG*GGSSDGCTQNPHLR
Trigger: GCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCCTCAGCCGGGCCCCAGAACTGCCCCTCCGTCTGCTCGTGCAGTAACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000494115.1
CDS GCA 90 bp TTGAAGGCCCCCACCTCAATCTGCCGGATGGAGTTCCTGCCCAACTaGAGGACCTCCAGGTGGTGGAGGTGGCGGAAGGTGTCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LKAPTSICRMEFLPN*RTSRWWRWRKVSAW
Trigger: CCAGGCCGACACCTTCCGCCACCTCCACCACCTGGAGGTCCTGCAGTTGGGCAGGAACTCCATCCGGCAGATTGAGGTGGGGGCCTTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249363.4
ENST00000494115.1
CDS GCA 90 bp TTGTTCTCCATGAGGTTGAGGTACCGGGTGTTCGAGGGAATACCCTaGGGGACCTCGGAGAGGCCCCGGCGCGTGCACACCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LFSMRLRYRVFEGIP*GTSERPRRVHTTLL
Trigger: CAGCAAGGTGGTGTGCACGCGCCGGGGCCTCTCCGAGGTCCCGCAGGGTATTCCCTCGAACACCCGGTACCTCAACCTCATGGAGAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000494115.1
CDS GCA 90 bp TTCCCATTCCGACTTCGTCTCCTCCTCGCGCCGGGCTCGCGGTGTTaGAGGCGGCAGCCACGCAGACTGCTCTCTCATCCTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: FPFRLRLLLAPGSRC*RRQPRRLLSHPFVL
Trigger: AAGGACAAAAGGATGAGAGAGCAGTCTGCGTGGCTGCCGCCTGCAACACCGCGAGCCCGGCGCGAGGAGGAGACGAAGTCGGAATGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476782.5
CDS CCA 90 bp AAGGTGCCGTCGTTGAGGACAGAGATCCTTGGGTGGCGGGAGGCGTaGCTGAGCACTGTCCCATTGGGCAGCAACCACTTCACGGAGGAC +
Preference number: 5 (lower is better)
Translates to: KVPSLRTEILGWREA*LSTVPLGSNHFTED
Trigger: GTCCTCCGTGAAGTGGTTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CAGGAAAGCACTGGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCCGACTTCGTCTCCTCCTCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: QESTGVVSLSFLHGS*APRSHSDFVSSSRR
Trigger: CCGGCGCGAGGAGGAGACGAAGTCGGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGTGCTTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476782.5
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGGCGAAGCCGCGGAGTaGAGGCGCGCCTGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSGEAAE*RRAWES
Trigger: GCTCTCCCAGGCGCGCCTCAACTCCGCGGCTTCGCC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 90 bp AGGCGGCAGCAGCGATGGCTGCACACAGAATCCACACTTGCGCCGTaGGGTAGACGAACGGGAGCAGGATGGCATTCCAGGTGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: RRQQRWLHTESTLAP*GRRTGAGWHSRCGG
Trigger: ACCACCACACCTGGAATGCCATCCTGCTCCCGTTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
ENST00000494115.1
CDS CCA 90 bp AGGAGGCCTGGTCCACCTCCACGAGGTAGCGGCCTCGCATGTGCATaGGAGCATGACAGCGGCCACAGCAGGTGGAATTGGTGGGTATAT +
Preference number: 5 (lower is better)
Translates to: RRPGPPPRGSGLACA*EHDSGHSRWNWWVY
Trigger: ATATACCCACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCCGCTACCTCGTGGAGGTGGACCAGGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp TGGGAAAAGTTCAAGGTGCCGTCGTTGAGGACAGAGATCCTTGGGTaGCGGGAGGCGTGGCTGAGCACTGTCCCATTGGGCAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: WEKFKVPSLRTEILG*REAWLSTVPLGSNH
Trigger: GTGGTTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAACTTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CACGTGGGAAAAGTTCAAGGTGCCGTCGTTGAGGACAGAGATCCTTaGGTGGCGGGAGGCGTGGCTGAGCACTGTCCCATTGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: HVGKVQGAVVEDRDP*VAGGVAEHCPIGQQ
Trigger: TTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAACTTTTCCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp GGTGTGGTGGTGCACAGTTACCTCGGAAGGAAGGCAGGAAAGCACTaGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTGGGCACCTCG +
Preference number: 5 (lower is better)
Translates to: GVVVHSYLGRKAGKH*RGVLKLSPRELGTS
Trigger: CGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGTGCTTTCCTGCCTTCCTTCCGAGGTAACTGTGCACCACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494115.1
CDS GCA 90 bp ATCCAGGCTGGTCTGCATCTTGTCAGTGGTGTCTGTCGCGGGTACTaGCACCTGCTTGGGCACACGGGTAGTCTGAATGAGCACCGTGGT +
Preference number: 5 (lower is better)
Translates to: IQAGLHLVSGVCRGY*HLLGHTGSLNEHRG
Trigger: ACCACGGTGCTCATTCAGACTACCCGTGTGCCCAAGCAGGTGGCAGTACCCGCGACAGACACCACTGACAAGATGCAGACCAGCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp ACCTCCAGGTGGTGGAGGTGGCGGAAGGTGTCGGCCTGGATCATCTaGATGTTGTTCTCCATGAGGTTGAGGTACCGGGTGTTCGAGGGA +
Preference number: 5 (lower is better)
Translates to: TSRWWRWRKVSAWII*MLFSMRLRYRVFEG
Trigger: TCCCTCGAACACCCGGTACCTCAACCTCATGGAGAACAACATCCAGATGATCCAGGCCGACACCTTCCGCCACCTCCACCACCTGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249363.4
ENST00000494115.1
CDS CCA 90 bp AGCGGCCTCGCATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTaGAATTGGTGGGTATATACTCTCGAAGCCACCAGGCTAGCCACA +
Preference number: 5 (lower is better)
Translates to: SGLACAWEHDSGHSR*NWWVYTLEATRLAT
Trigger: TGTGGCTAGCCTGGTGGCTTCGAGAGTATATACCCACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp GCTGTTGCTGCTGCGGATGTTGCTGCTGGGATGTCTTCGTCCACCTaGATTATCTCAACAGTCCGGGCGGCTGTGACTGTACTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: AVAAADVAAGMSSST*IISTVRAAVTVLRC
Trigger: GCAGCGGAGTACAGTCACAGCCGCCCGGACTGTTGAGATAATCCAGGTGGACGAAGACATCCCAGCAGCAACATCCGCAGCAGCAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CAGGAAAGCACTGGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCCGACTTCCCCTTTCTCCTCGCCTCT +
Preference number: 5 (lower is better)
Translates to: QESTGVVSLSFLHGS*APRSHSDFPFLLAS
Trigger: AGAGGCGAGGAGAAAGGGGAAGTCGGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGTGCTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478726.1
CDS-3UTR CAA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAAACAGCTCCAGGGTGTaGAGGCTGGCCAGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTNSSRV*RLARPL
Trigger: CAACGGCCTGGCCAGCCTCAACACCCTGGAGCTGTT...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACACGGACGGAGCTGCTGTaGCTGCTGCGGATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTRTELL*LLRMLL
Trigger: CAGCAACATCCGCAGCAGCAACAGCAGCTCCGTCCG...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 90 bp CTTAAGTTCTGCCATCCGACCCTCAGAAATGTTGAGGTCTCGAGGTaGGTCCATGATGAAGGGGGCAGAGCACTGGAAGGAGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LKFCHPTLRNVEVSR*VHDEGGRALEGGLV
Trigger: GACCAGGCCTCCTTCCAGTGCTCTGCCCCCTTCATCATGGACGCACCTCGAGACCTCAACATTTCTGAGGGTCGGATGGCAGAACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTTTCCCGGCTTTGTCCTaGGACCCTGGCACCGGCTCG +
Preference number: 5 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCFPALS*DPGTGS
Trigger: CGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGAA...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTAGGCTGGCCAGGCCGTaGAAGGCCCCCACCTCAATC +
Preference number: 5 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCRLARP*KAPTSI
Trigger: GATTGAGGTGGGGGCCTTCAACGGCCTGGCCAGCCT...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 90 bp GGGATTTTGGCTCGGAAAGGAGAACCAGCCCTACCCCGGCTTAAGTaGGCTAGGAGCTCCTCTTTCCATCTCGGAAGGAAGGCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GILARKGEPALPRLK*ARSSSFHLGRKAGK
Trigger: CTTTCCTGCCTTCCTTCCGAGATGGAAAGAGGAGCTCCTAGCTCACTTAAGCCGGGGTAGGGCTGGTTCTCCTTTCCGAGCCAAAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS TCA 90 bp GTTAATATGGTCATGAATTGTGGGCAGCACTACTGCCCCCTCACCTaGTACACCGGACGGAGCTGCTGTTGCTGCTGCGGATGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: VNMVMNCGQHYCPLT*YTGRSCCCCCGCCC
Trigger: GCAGCAACATCCGCAGCAGCAACAGCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAGTAGTGCTGCCCACAATTCATGACCATATTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 90 bp GGGCACACGGGTAGTCTGAATGAGCACCGTGGTAGAGGTGGTATATaGCGGCTGGTAACCAGTGGACGTGGTAGGAACAGGCTTGTACTT +
Preference number: 5 (lower is better)
Translates to: GHTGSLNEHRGRGGI*RLVTSGRGRNRLVL
Trigger: AAGTACAAGCCTGTTCCTACCACGTCCACTGGTTACCAGCCGGCATATACCACCTCTACCACGGTGCTCATTCAGACTACCCGTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp GCATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTGGTaGGTATATACTCTCGAAGCCACCAGGCTAGCCACAGAATGTCAC +
Preference number: 5 (lower is better)
Translates to: ACAWEHDSGHSRWNW*VYTLEATRLATECH
Trigger: GTGACATTCTGTGGCTAGCCTGGTGGCTTCGAGAGTATATACCCACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CTCGCATGTGCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTaGTGGGTATATACTCTCGAAGCCACCAGGCTAGCCACAGAATGT +
Preference number: 5 (lower is better)
Translates to: LACAWEHDSGHSRWN*WVYTLEATRLATEC
Trigger: ACATTCTGTGGCTAGCCTGGTGGCTTCGAGAGTATATACCCACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCATGACCCAGAGCTTCTaGAGGGAGCTCAGGCCATGG +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSMTQSF*RELRPW
Trigger: CCATGGCCTGAGCTCCCTCAAGAAGCTCTGGGTCAT...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 90 bp CAACCACTTCACGGAGGACATAGGGGGAGTCCGACACTTAAGTTCTaGCATCCGACCCTCAGAAATGTTGAGGTCTCGAGGTGCGTCCAT +
Preference number: 5 (lower is better)
Translates to: QPLHGGHRGSPTLKF*HPTLRNVEVSRCVH
Trigger: ATGGACGCACCTCGAGACCTCAACATTTCTGAGGGTCGGATGGCAGAACTTAAGTGTCGGACTCCCCCTATGTCCTCCGTGAAGTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGCAGCGCTTCCCGGCTTaGTCCTTGGACCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWQRFPA*SLDPGT
Trigger: GGTGCCAGGGTCCAAGGACAAAGCCGGGAAGCGCTG...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTTCAGTCTATCCCTCTaGCCCCCTCAGCAGCCCACA +
Preference number: 5 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVFSLSL*PPQQPT
Trigger: TGTGGGCTGCTGAGGGGGCAAGAGGGATAGACTGAA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 90 bp GGATGTCTTCGTCCACCTGGATTATCTCAACAGTCCGGGCGGCTGTaGCTGTACTCCGCTGCTGGTGCCGCTTACGAAGTTTATAGAAGA +
Preference number: 5 (lower is better)
Translates to: GCLRPPGLSQQSGRL*LYSAAGAAYEVYRR
Trigger: TCTTCTATAAACTTCGTAAGCGGCACCAGCAGCGGAGTACAGTCACAGCCGCCCGGACTGTTGAGATAATCCAGGTGGACGAAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 90 bp AACGGGAGCAGGATGGCATTCCAGGTGTGGTGGTGCACAGTTACCTaGCACAAGAGCTTCATGGTGTGGCACGTTCATAATTCACCATCG +
Preference number: 5 (lower is better)
Translates to: NGSRMAFQVWWCTVT*HKSFMVWHVHNSPS
Trigger: CGATGGTGAATTATGAACGTGCCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCACCACACCTGGAATGCCATCCTGCTCCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCACACAGAATCCACACTaGCGCCGTGAGGTAGACGAA +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSTQNPH*RREVDE
Trigger: TTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGT...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCTTGTTCTCCATGAGGTaGAGGTACCGGGTGTTCGAG +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSLFSMR*RYRVFE
Trigger: CTCGAACACCCGGTACCTCAACCTCATGGAGAACAA...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTCTGAGCACTGTCCCATaGGGCAGCAACCACTTCACG +
Preference number: 5 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCLSTVP*GSNHFT
Trigger: CGTGAAGTGGTTGCTGCCCAATGGGACAGTGCTCAG...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAGTGGGTTAAGCCCAACTGCAGGAATCTGGTGCAATGTGAAAGCATTAGACTGGCCGAGGCGTTGGAGTaGCCTGCAACATTGGTCACC +
Preference number: 5 (lower is better)
Translates to: EWVKPNCRNLVQCESIRLAEALE*PATLVT
Trigger: GGTGACCAATGTTGCAGGCAACTCCAACGCCTCGGC...CAGTCTAATGCTTTCACATTGCACCAGATTCCTGCAGTTGGGCTTAACCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAACAGACCCCCAAGACTaGTGCACATGGACAAAGACT +
Preference number: 5 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTTDPQD*CTWTKT
Trigger: AGTCTTTGTCCATGTGCACAAGTCTTGGGGGTCTGT...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 90 bp GGGCAAAGAAGAGAGGTTATTGTGGGCCAAGTTGAGTTCCACAAGTaGAGCCAGCCCGTCAAAAGCATTCCGCTCAATCAGGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: GQRREVIVGQVEFHK*SQPVKSIPLNQADL
Trigger: CAGGTCAGCCTGATTGAGCGGAATGCTTTTGACGGGCTGGCTTCACTTGTGGAACTCAACTTGGCCCACAATAACCTCTCTTCTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CAGGTGTGGTGGTGCACAGTTACCTGCCACAAGAGCTTCATGGTGTaGCACGTTCATAATTCACCATCGCCTGGGATTTTGGCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: QVWWCTVTCHKSFMV*HVHNSPSPGILARK
Trigger: TTTCCGAGCCAAAATCCCAGGCGATGGTGAATTATGAACGTGCCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCACCACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS CCA 90 bp CATTCCAGGTGTGGTGGTGCACAGTTACCTGCCACAAGAGCTTCATaGTGTGGCACGTTCATAATTCACCATCGCCTGGGATTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: HSRCGGAQLPATRAS*CGTFIIHHRLGFWL
Trigger: GAGCCAAAATCCCAGGCGATGGTGAATTATGAACGTGCCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCACCACACCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS-3UTR CAA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCCGACCCTCAGAAATGTaGAGGTCTCGAGGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFRPSEM*RSRGAS
Trigger: GGACGCACCTCGAGACCTCAACATTTCTGAGGGTCG...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCGAGTTGCCTGCAACATaGGTCACCATGCATGTGTAC +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSELPAT*VTMHVY
Trigger: GTACACATGCATGGTGACCAATGTTGCAGGCAACTC...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACAAAGTTAACTTGTGGCTaGTACCCCACAACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTKLTCG*YPTTFP
Trigger: TGGGAACGTTGTGGGGTACAAGCCACAAGTTAACTT...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp TGTAGATGCAACTCCACCAGGTACCTCAGCGGGGTAAAGAGGTCATaGGGCAAAGAAGAGAGGTTATTGTGGGCCAAGTTGAGTTCCACA +
Preference number: 5 (lower is better)
Translates to: CRCNSTRYLSGVKRS*GKEERLLWAKLSST
Trigger: TGTGGAACTCAACTTGGCCCACAATAACCTCTCTTCTTTGCCCCATGACCTCTTTACCCCGCTGAGGTACCTGGTGGAGTTGCATCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCCCATCGCCTGGGATTTaGGCTCGGAAAGGAGAACCA +
Preference number: 5 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFPSPGI*ARKGEP
Trigger: TGGTTCTCCTTTCCGAGCCAAAATCCCAGGCGATGG...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACATTCAGATACTTGAGGTaGAACAGCCCCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTFRYLR*NSPSKA
Trigger: AGCTTTTGAGGGGCTGTTCAACCTCAAGTATCTGAA...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GGGAAAGGCTTCATTACTTTACGTGAGCCTGTACCCTTTTCGTCTCTCCCTTTTAGGCTGGTCTGCATCTaGTCAGTGGTGTCTGTCGCG +
Preference number: 5 (lower is better)
Translates to: GKGFITLREPVPFSSLPFRLVCI*SVVSVA
Trigger: CGCGACAGACACCACTGACAAGATGCAGACCAGCCT...AAAAGGGAGAGACGAAAAGGGTACAGGCTCACGTAAAGTAATGAAGCCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTCAGGCAAGGCACATGTGTGTCCAGTGCACAGACCCCCAAGACTTGTGCACATGTGAACCATCCTGGTaGGGAAAGGCTTCATTACTT +
Preference number: 5 (lower is better)
Translates to: CQARHMCVQCTDPQDLCTCEPSW*GKASLL
Trigger: AAGTAATGAAGCCTTTCCCAACCAGGATGGTTCACA...TGTGCACAAGTCTTGGGGGTCTGTGCACTGGACACACATGTGCCTTGCCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAAGCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTCCCAAGTTCAGATACTaGAGGTTGAACAGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: EASHQCAPFNSTPCGTPCPKFRY*RLNSPS
Trigger: TGAGGGGCTGTTCAACCTCAAGTATCTGAACTTGGG...ACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTTCCCATCAGTGTGCTCCATTCAACAGTACCCCATGTGGAACTCCATGTGTGTTATTGTGGGCCAAGTaGAGTTCCACAAGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ASHQCAPFNSTPCGTPCVLLWAK*SSTSEA
Trigger: GGCTTCACTTGTGGAACTCAACTTGGCCCACAATAA...CACACATGGAGTTCCACATGGGGTACTGTTGAATGGAGCACACTGATGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCAAAGAAGAGAGGTTATaGTGGGCCAAGTTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSKEERL*WAKLSS
Trigger: GGAACTCAACTTGGCCCACAATAACCTCTCTTCTTT...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGTTCAAGGTGCCGTCGTaGAGGACAGAGATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWFKVPS*RTEILG
Trigger: CCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAA...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCATTGCTGCTGCGGATGTaGCTGCTGGGATGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPLLLRM*LLGCLR
Trigger: ACGAAGACATCCCAGCAGCAACATCCGCAGCAGCAA...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCCATCACCACAACCAGTaGACATCCGCTGTAATAATC +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSHHHNQ*TSAVII
Trigger: GATTATTACAGCGGATGTCAACTGGTTGTGGTGATG...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 90 bp CAGGAAAGCACTGGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCCGACTTCTTAGTTTTAATTAACAAA +
Preference number: 5 (lower is better)
Translates to: QESTGVVSLSFLHGS*APRSHSDFLVLINK
Trigger: TTTGTTAATTAAAACTAAGAAGTCGGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGTGCTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGATATACTCCAGCTTCTaGAGCTCCCCCAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWIYSSF*SSPKSR
Trigger: CCTGGACTTGGGGGAGCTCAAGAAGCTGGAGTATAT...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCTCACAGTTCCAAGGGTaGTGGTGTAGATGCAACTCC +
Preference number: 5 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFSQFQG*WCRCNS
Trigger: GGAGTTGCATCTACACCACAACCCTTGGAACTGTGA...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGGCTTGTACTTTCGCGTaGTGTCCTCAGGCGAGATCT +
Preference number: 5 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWACTFA*CPQARS
Trigger: AGATCTCGCCTGAGGACACAACGCGAAAGTACAAGC...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp TGTGCACATGGACAAAGACTCAGCCCCTTTAAGGGTTCGTTTGAATTTTGGTGGGTGGTAGGAACAGGCTaGTACTTTCGCGTTGTGTCC +
Preference number: 5 (lower is better)
Translates to: CAHGQRLSPFKGSFEFWWVVGTG*YFRVVS
Trigger: GGACACAACGCGAAAGTACAAGCCTGTTCCTACCAC...CCACCAAAATTCAAACGAACCCTTAAAGGGGCTGAGTCTTTGTCCATGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCACCACAGCAGGTGGAATaGGTGGGTATATACTCTCGA +
Preference number: 5 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPPQQVE*VGIYSR
Trigger: TCGAGAGTATATACCCACCAATTCCACCTGCTGTGG...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCATGGATCATCTGGATGTaGTTCTCCATGAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPWIIWM*FSMRLR
Trigger: CCTCAACCTCATGGAGAACAACATCCAGATGATCCA...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GAGTCACCAAATCACAAGCATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCGGCATGTCTTTAATGTaGCACATGCCCAAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: ESPNHKHEKSFHSQAPQFGMSLM*HMPKFR
Trigger: TCTGAACTTGGGCATGTGCAACATTAAAGACATGCC...GAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCATGCTTGTGATTTGGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp ATGAGAAAAGCTTCCACTCCCAAGCTCCCCAATTCAGGCTTCTCCTCCCTCTCCCATAAAATGCCATCATaGTCTACAATCATGTGTCAG +
Preference number: 5 (lower is better)
Translates to: MRKASTPKLPNSGFSSLSHKMPS*STIMCQ
Trigger: CTGACACATGATTGTAGACAATGATGGCATTTTATG...GGAGAGGGAGGAGAAGCCTGAATTGGGGAGCTTGGGAGTGGAAGCTTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCACCTTTAAGGGTTCGTTaGAATTTTGGTGGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPPLRVR*NFGGFP
Trigger: AGGAAAACCACCAAAATTCAAACGAACCCTTAAAGG...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS-3UTR CAA 90 bp GCTAATTTATGGCCTCCTGTGAATACATTCTCTCTGCTTTACCCTCCCTTCCCAATTGCCACTATCATTTaGGCACAGTACAAATTCATG +
Preference number: 5 (lower is better)
Translates to: ANLWPPVNTFSLLYPPFPIATII*AQYKFM
Trigger: CATGAATTTGTACTGTGCCAAAATGATAGTGGCAAT...TGGGAAGGGAGGGTAAAGCAGAGAGAATGTATTCACAGGAGGCCATAAATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp GCTCCAGCCGCGGGGGAAGGCGCTTCATCGCCAAAGTaGGCTCCGGCGGCCCCGGCCCGCTCTGCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: APAAGEGASSPK*APAAPARSAGR
Trigger: GCGGCCCGCAGAGCGGGCCGGGGCCGCCGGAGCGCACTTTGGCGATGAAGCGCCTTCCCCCGCGGCTGGAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp GCGCCACCAGCGCTTCCCGGCTTTGTCCTTGGACCCTaGCACCGGCTCGCTCCAGCCGCGGGGGAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: APPALPGFVLGP*HRLAPAAGEGA
Trigger: AGCGCCTTCCCCCGCGGCTGGAGCGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGAAGCGCTGGTGGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 72 bp AAGGAGCGGCGCCACCAGCGCTTCCCGGCTTTGTCCTaGGACCCTGGCACCGGCTCGCTCCAGCCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: KERRHQRFPALS*DPGTGSLQPRG
Trigger: CCCCCGCGGCTGGAGCGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGAAGCGCTGGTGGCGCCGCTCCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 72 bp CCGCCCAAGGAGCGGCGCCACCAGCGCTTCCCGGCTTaGTCCTTGGACCCTGGCACCGGCTCGCTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: PPKERRHQRFPA*SLDPGTGSLQP
Trigger: CGGCTGGAGCGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGAAGCGCTGGTGGCGCCGCTCCTTGGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 90 bp CCTCCGCCCAAGGAGCGGCGCCACCAGCGCTTCCCGGCTTTGTCCTaGGACCCTGGCACCGGCTCGCTCCAGCCGCGGGGGAAGGCGCTT +
Preference number: 6 (lower is better)
Translates to: PPPKERRHQRFPALS*DPGTGSLQPRGKAL
Trigger: AAGCGCCTTCCCCCGCGGCTGGAGCGAGCCGGTGCCAGGGTCCAAGGACAAAGCCGGGAAGCGCTGGTGGCGCCGCTCCTTGGGCGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 90 bp ATGGCCTCTAGTAAATCCGGAGCCGGAGCCGGCGAAGCCGCGGAGTaGAGGCGCGCCTGGGAGAGCCAAGGCCCGGCGGGCTATGCAGGT +
Preference number: 6 (lower is better)
Translates to: MASSKSGAGAGEAAE*RRAWESQGPAGYAG
Trigger: ACCTGCATAGCCCGCCGGGCCTTGGCTCTCCCAGGCGCGCCTCAACTCCGCGGCTTCGCCGGCTCCGGCTCCGGATTTACTAGAGGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp CCTCGGAGAGGCCCCGGCGCGTGCACACCACCTTGCTaGACTGGTTACTGCACGAGCAGACGGAGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: PRRGPGACTPPC*TGYCTSRRRGS
Trigger: ACTGCCCCTCCGTCTGCTCGTGCAGTAACCAGTTCAGCAAGGTGGTGTGCACGCGCCGGGGCCTCTCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000494115.1
CDS GCA 72 bp ATGAGGTTGAGGTACCGGGTGTTCGAGGGAATACCCTaGGGGACCTCGGAGAGGCCCCGGCGCGTGCACACC +
Preference number: 6 (lower is better)
Translates to: MRLRYRVFEGIP*GTSERPRRVHT
Trigger: GGTGTGCACGCGCCGGGGCCTCTCCGAGGTCCCGCAGGGTATTCCCTCGAACACCCGGTACCTCAACCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000494115.1
CDS CCA 72 bp AACTGGTTACTGCACGAGCAGACGGAGGGGCAGTTCTaGGGCCCGGCTGAGGCGGCAGCAGCGATGGCTGCA +
Preference number: 6 (lower is better)
Translates to: NWLLHEQTEGQF*GPAEAAAAMAA
Trigger: TGCAGCCATCGCTGCTGCCGCCTCAGCCGGGCCCCAGAACTGCCCCTCCGTCTGCTCGTGCAGTAACCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000494115.1
CDS GCA 72 bp CCCACCTCAATCTGCCGGATGGAGTTCCTGCCCAACTaGAGGACCTCCAGGTGGTGGAGGTGGCGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: PTSICRMEFLPN*RTSRWWRWRKV
Trigger: CACCTTCCGCCACCTCCACCACCTGGAGGTCCTGCAGTTGGGCAGGAACTCCATCCGGCAGATTGAGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249363.4
ENST00000494115.1
CDS CCA 72 bp GGTCCACCTCCACGAGGTAGCGGCCTCGCATGTGCATaGGAGCATGACAGCGGCCACAGCAGGTGGAATTGG +
Preference number: 6 (lower is better)
Translates to: GPPPRGSGLACA*EHDSGHSRWNW
Trigger: CCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGCACATGCGAGGCCGCTACCTCGTGGAGGTGGACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 72 bp GGCGGCAGCAGCGATGGCTGCACACAGAATCCACACTaGCGCCGTGAGGTAGACGAACGGGAGCAGGATGGC +
Preference number: 6 (lower is better)
Translates to: GGSSDGCTQNPH*RREVDEREQDG
Trigger: GCCATCCTGCTCCCGTTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTGCTGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
ENST00000494115.1
CDS CAA 90 bp GTTCCCATTCCGACTTCGTCTCCTCCTCGCGCCGGGCTCGCGGTGTaGCAGGCGGCAGCCACGCAGACTGCTCTCTCATCCTTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: VPIPTSSPPRAGLAV*QAAATQTALSSFCP
Trigger: AGGACAAAAGGATGAGAGAGCAGTCTGCGTGGCTGCCGCCTGCAACACCGCGAGCCCGGCGCGAGGAGGAGACGAAGTCGGAATGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476782.5
CDS CAA 90 bp ACAGAGATCCTTGGGTGGCGGGAGGCGTGGCTGAGCACTGTCCCATaGGGCAGCAACCACTTCACGGAGGACATAGGGGGAGTCCGACAC +
Preference number: 6 (lower is better)
Translates to: TEILGWREAWLSTVP*GSNHFTEDIGGVRH
Trigger: GTGTCGGACTCCCCCTATGTCCTCCGTGAAGTGGTTGCTGCCCAATGGGACAGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp TTCAAGGTGCCGTCGTTGAGGACAGAGATCCTTGGGTaGCGGGAGGCGTGGCTGAGCACTGTCCCATTGGGC +
Preference number: 6 (lower is better)
Translates to: FKVPSLRTEILG*REAWLSTVPLG
Trigger: GCCCAATGGGACAGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp GCGGGTACTGCCACCTGCTTGGGCACACGGGTAGTCTaGATGAGCACCGTGGTAGAGGTGGTATATGCCGGC +
Preference number: 6 (lower is better)
Translates to: AGTATCLGTRVV*MSTVVEVVYAG
Trigger: GCCGGCATATACCACCTCTACCACGGTGCTCATTCAGACTACCCGTGTGCCCAAGCAGGTGGCAGTACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp CGGGCTCGCGGTGTTGCAGGCGGCAGCCACGCAGACTaGTCTCTCATCCTTTTGTCCTTCAGTCAGAACGTG +
Preference number: 6 (lower is better)
Translates to: RARGVAGGSHAD*SLILLSFSQNV
Trigger: CACGTTCTGACTGAAGGACAAAAGGATGAGAGAGCAGTCTGCGTGGCTGCCGCCTGCAACACCGCGAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476782.5
CDS CCA 72 bp TTCCTGCCCAACTGCAGGACCTCCAGGTGGTGGAGGTaGCGGAAGGTGTCGGCCTGGATCATCTGGATGTTG +
Preference number: 6 (lower is better)
Translates to: FLPNCRTSRWWR*RKVSAWIIWML
Trigger: CAACATCCAGATGATCCAGGCCGACACCTTCCGCCACCTCCACCACCTGGAGGTCCTGCAGTTGGGCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249363.4
ENST00000494115.1
CDS TCA 72 bp CAGCGATGGCTGCACACAGAATCCACACTTGCGCCGTaGGGTAGACGAACGGGAGCAGGATGGCATTCCAGG +
Preference number: 6 (lower is better)
Translates to: QRWLHTESTLAP*GRRTGAGWHSR
Trigger: CCTGGAATGCCATCCTGCTCCCGTTCGTCTACCTCACGGCGCAAGTGTGGATTCTGTGTGCAGCCATCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
ENST00000494115.1
CDS TCA 72 bp AAAGCAGCACGTGGGAAAAGTTCAAGGTGCCGTCGTTaGGGACAGAGATCCTTGGGTGGCGGGAGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: KAARGKSSRCRR*GQRSLGGGRRG
Trigger: GCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAACTTTTCCCACGTGCTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp GTCATGAATTGTGGGCAGCACTACTGCCCCCTCACCTaGTACACCGGACGGAGCTGCTGTTGCTGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: VMNCGQHYCPLT*YTGRSCCCCCG
Trigger: TCCGCAGCAGCAACAGCAGCTCCGTCCGGTGTATCAGGTGAGGGGGCAGTAGTGCTGCCCACAATTCATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp ACTGGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCCGACTTCGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TGVVSLSFLHGS*APRSHSDFVSS
Trigger: GGAGGAGACGAAGTCGGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476782.5
CDS CAA 72 bp GAAAGCAGCACGTGGGAAAAGTTCAAGGTGCCGTCGTaGAGGACAGAGATCCTTGGGTGGCGGGAGGCGTGG +
Preference number: 6 (lower is better)
Translates to: ESSTWEKFKVPS*RTEILGWREAW
Trigger: CCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAACTTTTCCCACGTGCTGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 90 bp CCAGTGTCTGAAAGCAGCACGTGGGAAAAGTTCAAGGTGCCGTCGTaGAGGACAGAGATCCTTGGGTGGCGGGAGGCGTGGCTGAGCACT +
Preference number: 6 (lower is better)
Translates to: PVSESSTWEKFKVPS*RTEILGWREAWLST
Trigger: AGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAACTTTTCCCACGTGCTGCTTTCAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 90 bp AGGTGGTGGAGGTGGCGGAAGGTGTCGGCCTGGATCATCTGGATGTaGTTCTCCATGAGGTTGAGGTACCGGGTGTTCGAGGGAATACCC +
Preference number: 6 (lower is better)
Translates to: RWWRWRKVSAWIIWM*FSMRLRYRVFEGIP
Trigger: GGGTATTCCCTCGAACACCCGGTACCTCAACCTCATGGAGAACAACATCCAGATGATCCAGGCCGACACCTTCCGCCACCTCCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249363.4
ENST00000494115.1
CDS CAA 90 bp GGGGGAGTCCGACACTTAAGTTCTGCCATCCGACCCTCAGAAATGTaGAGGTCTCGAGGTGCGTCCATGATGAAGGGGGCAGAGCACTGG +
Preference number: 6 (lower is better)
Translates to: GGVRHLSSAIRPSEM*RSRGASMMKGAEHW
Trigger: CCAGTGCTCTGCCCCCTTCATCATGGACGCACCTCGAGACCTCAACATTTCTGAGGGTCGGATGGCAGAACTTAAGTGTCGGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp CGTCCACCTGGATTATCTCAACAGTCCGGGCGGCTGTaGCTGTACTCCGCTGCTGGTGCCGCTTACGAAGTT +
Preference number: 6 (lower is better)
Translates to: RPPGLSQQSGRL*LYSAAGAAYEV
Trigger: AACTTCGTAAGCGGCACCAGCAGCGGAGTACAGTCACAGCCGCCCGGACTGTTGAGATAATCCAGGTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp GGTCTGCATCTTGTCAGTGGTGTCTGTCGCGGGTACTaGCACCTGCTTGGGCACACGGGTAGTCTGAATGAG +
Preference number: 6 (lower is better)
Translates to: GLHLVSGVCRGY*HLLGHTGSLNE
Trigger: CTCATTCAGACTACCCGTGTGCCCAAGCAGGTGGCAGTACCCGCGACAGACACCACTGACAAGATGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp TGGTGGAGGTGGCGGAAGGTGTCGGCCTGGATCATCTaGATGTTGTTCTCCATGAGGTTGAGGTACCGGGTG +
Preference number: 6 (lower is better)
Translates to: WWRWRKVSAWII*MLFSMRLRYRV
Trigger: CACCCGGTACCTCAACCTCATGGAGAACAACATCCAGATGATCCAGGCCGACACCTTCCGCCACCTCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249363.4
ENST00000494115.1
CDS CCA 72 bp GCATGGGAGCATGACAGCGGCCACAGCAGGTGGAATTaGTGGGTATATACTCTCGAAGCCACCAGGCTAGCC +
Preference number: 6 (lower is better)
Translates to: AWEHDSGHSRWN*WVYTLEATRLA
Trigger: GGCTAGCCTGGTGGCTTCGAGAGTATATACCCACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp AAAGTTCAAGGTGCCGTCGTTGAGGACAGAGATCCTTaGGTGGCGGGAGGCGTGGCTGAGCACTGTCCCATT +
Preference number: 6 (lower is better)
Translates to: KVQGAVVEDRDP*VAGGVAEHCPI
Trigger: AATGGGACAGTGCTCAGCCACGCCTCCCGCCACCCAAGGATCTCTGTCCTCAACGACGGCACCTTGAACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp ACTGGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCCGACTTCCCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: TGVVSLSFLHGS*APRSHSDFPFL
Trigger: GAGAAAGGGGAAGTCGGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478726.1
CDS CAA 72 bp CCCTCAAAAGCTCCCTCAGAGATATACTCCAGCTTCTaGAGCTCCCCCAAGTCCAGGCGCATGAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PSKAPSEIYSSF*SSPKSRRMREG
Trigger: GCCCTCCCTCATGCGCCTGGACTTGGGGGAGCTCAAGAAGCTGGAGTATATCTCTGAGGGAGCTTTTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp GCTCGGAAAGGAGAACCAGCCCTACCCCGGCTTAAGTaGGCTAGGAGCTCCTCTTTCCATCTCGGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: ARKGEPALPRLK*ARSSSFHLGRK
Trigger: CTTCCTTCCGAGATGGAAAGAGGAGCTCCTAGCTCACTTAAGCCGGGGTAGGGCTGGTTCTCCTTTCCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS GCA 72 bp ACGAACGGGAGCAGGATGGCATTCCAGGTGTGGTGGTaGACAGTTACCTGCCACAAGAGCTTCATGGTGTGG +
Preference number: 6 (lower is better)
Translates to: TNGSRMAFQVWW*TVTCHKSFMVW
Trigger: CCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCACCACACCTGGAATGCCATCCTGCTCCCGTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS GCA 72 bp TGCCATCCGACCCTCAGAAATGTTGAGGTCTCGAGGTaGGTCCATGATGAAGGGGGCAGAGCACTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: CHPTLRNVEVSR*VHDEGGRALEG
Trigger: TCCTTCCAGTGCTCTGCCCCCTTCATCATGGACGCACCTCGAGACCTCAACATTTCTGAGGGTCGGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp TACACCGGACGGAGCTGCTGTTGCTGCTGCGGATGTTaGTGCTGGGATGTCTTCGTCCACCTGGATTATCTC +
Preference number: 6 (lower is better)
Translates to: YTGRSCCCCCGC*CWDVFVHLDYL
Trigger: GAGATAATCCAGGTGGACGAAGACATCCCAGCAGCAACATCCGCAGCAGCAACAGCAGCTCCGTCCGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp TGGGAGCATGACAGCGGCCACAGCAGGTGGAATTGGTaGGTATATACTCTCGAAGCCACCAGGCTAGCCACA +
Preference number: 6 (lower is better)
Translates to: WEHDSGHSRWNW*VYTLEATRLAT
Trigger: TGTGGCTAGCCTGGTGGCTTCGAGAGTATATACCCACCAATTCCACCTGCTGTGGCCGCTGTCATGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp GCTGCGGATGTTGCTGCTGGGATGTCTTCGTCCACCTaGATTATCTCAACAGTCCGGGCGGCTGTGACTGTA +
Preference number: 6 (lower is better)
Translates to: AADVAAGMSSST*IISTVRAAVTV
Trigger: TACAGTCACAGCCGCCCGGACTGTTGAGATAATCCAGGTGGACGAAGACATCCCAGCAGCAACATCCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 72 bp TCGGCCTGGATCATCTGGATGTTGTTCTCCATGAGGTaGAGGTACCGGGTGTTCGAGGGAATACCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SAWIIWMLFSMR*RYRVFEGIPCG
Trigger: CCCGCAGGGTATTCCCTCGAACACCCGGTACCTCAACCTCATGGAGAACAACATCCAGATGATCCAGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000494115.1
CDS CAA 72 bp GTGGTCTTCATGACTTCATCCAGGCTGGTCTGCATCTaGTCAGTGGTGTCTGTCGCGGGTACTGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: VVFMTSSRLVCI*SVVSVAGTATC
Trigger: GCAGGTGGCAGTACCCGCGACAGACACCACTGACAAGATGCAGACCAGCCTGGATGAAGTCATGAAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp CACGGAGGACATAGGGGGAGTCCGACACTTAAGTTCTaGCATCCGACCCTCAGAAATGTTGAGGTCTCGAGG +
Preference number: 6 (lower is better)
Translates to: HGGHRGSPTLKF*HPTLRNVEVSR
Trigger: CCTCGAGACCTCAACATTTCTGAGGGTCGGATGGCAGAACTTAAGTGTCGGACTCCCCCTATGTCCTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp CCGAGGCGTTGGAGTTGCCTGCAACATTGGTCACCATaGATGTGTACACCCCAGTGTCTGAAAGCAGCACGT +
Preference number: 6 (lower is better)
Translates to: PRRWSCLQHWSP*MCTPQCLKAAR
Trigger: ACGTGCTGCTTTCAGACACTGGGGTGTACACATGCATGGTGACCAATGTTGCAGGCAACTCCAACGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp GGTAGTCTGAATGAGCACCGTGGTAGAGGTGGTATATaGCGGCTGGTAACCAGTGGACGTGGTAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: GSLNEHRGRGGI*RLVTSGRGRNR
Trigger: CCTGTTCCTACCACGTCCACTGGTTACCAGCCGGCATATACCACCTCTACCACGGTGCTCATTCAGACTACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CAA 72 bp GTGTGGCACGTTCATAATTCACCATCGCCTGGGATTTaGGCTCGGAAAGGAGAACCAGCCCTACCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: VWHVHNSPSPGI*ARKGEPALPRL
Trigger: AAGCCGGGGTAGGGCTGGTTCTCCTTTCCGAGCCAAAATCCCAGGCGATGGTGAATTATGAACGTGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS CAA 72 bp CGACACTTAAGTTCTGCCATCCGACCCTCAGAAATGTaGAGGTCTCGAGGTGCGTCCATGATGAAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: RHLSSAIRPSEM*RSRGASMMKGA
Trigger: TGCCCCCTTCATCATGGACGCACCTCGAGACCTCAACATTTCTGAGGGTCGGATGGCAGAACTTAAGTGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp ACTGGCGTGGTGTCCTTAAGCTTTCTCCACGGGAGCTaGGCACCTCGTTCCCATTCCGACTTCTTAGTTTTA +
Preference number: 6 (lower is better)
Translates to: TGVVSLSFLHGS*APRSHSDFLVL
Trigger: TAAAACTAAGAAGTCGGAATGGGAACGAGGTGCCCAGCTCCCGTGGAGAAAGCTTAAGGACACCACGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp TGTGGTGGTGCACAGTTACCTGCCACAAGAGCTTCATaGTGTGGCACGTTCATAATTCACCATCGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CGGAQLPATRAS*CGTFIIHHRLG
Trigger: TCCCAGGCGATGGTGAATTATGAACGTGCCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS CCA 72 bp AACTCCACCAGGTACCTCAGCGGGGTAAAGAGGTCATaGGGCAAAGAAGAGAGGTTATTGTGGGCCAAGTTG +
Preference number: 6 (lower is better)
Translates to: NSTRYLSGVKRS*GKEERLLWAKL
Trigger: CAACTTGGCCCACAATAACCTCTCTTCTTTGCCCCATGACCTCTTTACCCCGCTGAGGTACCTGGTGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp ATGCATGTGTACACCCCAGTGTCTGAAAGCAGCACGTaGGAAAAGTTCAAGGTGCCGTCGTTGAGGACAGAG +
Preference number: 6 (lower is better)
Translates to: MHVYTPVSESST*EKFKVPSLRTE
Trigger: CTCTGTCCTCAACGACGGCACCTTGAACTTTTCCCACGTGCTGCTTTCAGACACTGGGGTGTACACATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp AACATTGGTCACCATGCATGTGTACACCCCAGTGTCTaGAAGCAGCACGTGGGAAAAGTTCAAGGTGCCGTC +
Preference number: 6 (lower is better)
Translates to: NIGHHACVHPSV*KQHVGKVQGAV
Trigger: GACGGCACCTTGAACTTTTCCCACGTGCTGCTTTCAGACACTGGGGTGTACACATGCATGGTGACCAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS GCA 72 bp AGGATGGCATTCCAGGTGTGGTGGTGCACAGTTACCTaGCACAAGAGCTTCATGGTGTGGCACGTTCATAAT +
Preference number: 6 (lower is better)
Translates to: RMAFQVWWCTVT*HKSFMVWHVHN
Trigger: ATTATGAACGTGCCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCACCACACCTGGAATGCCATCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS CCA 72 bp GGTGCCGCTTACGAAGTTTATAGAAGACAATCAACATaGCGGCAGCTAGCAGAGTCACTGCCACAAAGCAGC +
Preference number: 6 (lower is better)
Translates to: GAAYEVYRRQST*RQLAESLPQSS
Trigger: GCTGCTTTGTGGCAGTGACTCTGCTAGCTGCCGCCATGTTGATTGTCTTCTATAAACTTCGTAAGCGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp AGAGAGGTTATTGTGGGCCAAGTTGAGTTCCACAAGTaGAGCCAGCCCGTCAAAAGCATTCCGCTCAATCAG +
Preference number: 6 (lower is better)
Translates to: REVIVGQVEFHK*SQPVKSIPLNQ
Trigger: CTGATTGAGCGGAATGCTTTTGACGGGCTGGCTTCACTTGTGGAACTCAACTTGGCCCACAATAACCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS TCA 72 bp CATGGGGCAAAGAAGAGAGGTTATTGTGGGCCAAGTTaGGTTCCACAAGTGAAGCCAGCCCGTCAAAAGCAT +
Preference number: 6 (lower is better)
Translates to: HGAKKRGYCGPS*VPQVKPARQKH
Trigger: ATGCTTTTGACGGGCTGGCTTCACTTGTGGAACTCAACTTGGCCCACAATAACCTCTCTTCTTTGCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4
CDS CCA 72 bp TGGTGCACAGTTACCTGCCACAAGAGCTTCATGGTGTaGCACGTTCATAATTCACCATCGCCTGGGATTTTG +
Preference number: 6 (lower is better)
Translates to: WCTVTCHKSFMV*HVHNSPSPGIL
Trigger: CAAAATCCCAGGCGATGGTGAATTATGAACGTGCCACACCATGAAGCTCTTGTGGCAGGTAACTGTGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249363.4
ENST00000476782.5
ENST00000478726.1
CDS CAA 72 bp TCATGGGGCAAAGAAGAGAGGTTATTGTGGGCCAAGTaGAGTTCCACAAGTGAAGCCAGCCCGTCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SWGKEERLLWAK*SSTSEASPSKA
Trigger: TGCTTTTGACGGGCTGGCTTCACTTGTGGAACTCAACTTGGCCCACAATAACCTCTCTTCTTTGCCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249363.4