Pregenerated sensors for LRRC38 (Homo sapiens)
Ensembl gene IDs: ENSG00000162494Ensembl transcript IDs: ENST00000376085.4
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCATCTTCTCCCCCAACACACACCTCGATCTGAGAGGCAGGTTATaGTCCAGGAATAATTCCCTCCATCCTTCCTGGGCTTCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VIFSPNTHLDLRGRL*SRNNSLHPSWASVL Trigger: GAGCACAGAAGCCCAGGAAGGATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTTGGGGGAGAAGATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR GCA 90 bp | CCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTaGTTTTCCATTTTCAGCATTTCCCTCTCGTCTTGGAGAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: PRHGTGSVQFTDGGQ*FSIFSISLSSWREL Trigger: AAGCTCTCTCCAAGACGAGAGGGAAATGCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 90 bp | CCACTGTTTGAGCTGCTGTTTCTTGGGAGGAAGGCAGATGTTTCATaGTCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCT | + |
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Preference number: 1 (lower is better) Translates to: PLFELLFLGRKADVS*SPSTGQKKNGVKSS Trigger: AGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR CCA 90 bp | GAAGGCAGATGTTTCATGATCTCCCAGTACAGGTCAGAAAAAGAATaGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: EGRCFMISQYRSEKE*RKIIFAIESCQSSH Trigger: ATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACATCTGCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 90 bp | TTGCACACGAGTTTATTAGTTCCCAGTATAACATCCCAAGGTTGCTaGGGCCTATTATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LHTSLLVPSITSQGC*GLLYKDQSSRSCGE Trigger: TTCACCACAAGAACGAGAACTTTGATCCTTATATAATAGGCCTCAGCAACCTTGGGATGTTATACTGGGAACTAATAAACTCGTGTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR CCA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCCTTCTGGTTCGGTGCTaGAGAGTAAGAGGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VPRGQDTEQALFSSQMVALLVRC*RVRGRR Trigger: CCTCCTGCCTCTTACTCTCCAGCACCGAACCAGAAG...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTATGAAGCCTGACTCGGTCATCTTCTCCCCCAACACACACCTCGATCTGGCTGATTCTAAACTCTaGGATCAGTGGTCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SAMKPDSVIFSPNTHLDLADSKL*DQWSQQ Trigger: CTGCTGGGACCACTGATCTCAGAGTTTAGAATCAGC...CAGATCGAGGTGTGTGTTGGGGGAGAAGATGACCGAGTCAGGCTTCATAGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR GCA 90 bp | GGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCCTGGGGGCTGAGAGGCAGGTTATaGTCCAGGAATAATTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GVKSSLPLKAASLHISWGLRGRL*SRNNSL Trigger: GAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAG...CCCCCAGGAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCCCAACACACACCTCGATCTGAGAGGCAGGTTATGCTCCAGGAATAATTGTTCAGTTCACAGATaGTGGCCAGTGCTTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: FSPNTHLDLRGRLCSRNNCSVHR*WPVLFH Trigger: ATGGAAAAGCACTGGCCACCATCTGTGAACTGAACA...ATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTTGGGGGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCATCAGCTATGAAGCCTaGCTCGGTCATCTTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QYRSEKEWRKIIFAIESCISYEA*LGHLLP Trigger: GGGGAGAAGATGACCGAGTCAGGCTTCATAGCTGAT...GCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCGAGCTTCTGGTTCGGTaGTGGAGAGTAAGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KEWRKIIFAIESCQSSHFELLVR*WRVRGR Trigger: CCTGCCTCTTACTCTCCAGCACCGAACCAGAAGCTC...GAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR CAA 90 bp | GTTCTCGTTCTTGTGGTGAATGATCCGAATTTGAATCTCCACTGTTaGAGCTGCTGTTTCTTGGGAGGAAGGCAGATGTTTCATGATCTC | + |
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Preference number: 2 (lower is better) Translates to: VLVLVVNDPNLNLHC*SCCFLGGRQMFHDL Trigger: GAGATCATGAAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR CAA 90 bp | TATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAATGATCCGAATTaGAATCTCCACTGTTTGAGCTGCTGTTTCTTGGGAGGAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: YIRIKVLVLVVNDPN*NLHCLSCCFLGGRQ Trigger: CTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAACTTTGATCCTTATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR GCA 90 bp | AACATTGAGTCTATTGCACACGAGTTTATTAGTTCCCAGTATAACATCCCAAGGCTTCCTGGGCTTCTGTaGTCTGCTGATTCTAAACTC | + |
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Preference number: 2 (lower is better) Translates to: NIESIAHEFISSQYNIPRLPGLL*SADSKL Trigger: GAGTTTAGAATCAGCAGAGCACAGAAGCCCAGGAAG...CCTTGGGATGTTATACTGGGAACTAATAAACTCGTGTGCAATAGACTCAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTGCTGAGGCCTATTATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAATTTTAGTCATCAGCTATaGAGCCTGACTCGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KVAEAYYIRIKVLVLVVNFSHQL*SLTRSS Trigger: AGATGACCGAGTCAGGCTTCATAGCTGATGACTAAA...ATTCACCACAAGAACGAGAACTTTGATCCTTATATAATAGGCCTCAGCAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGTTCTCGTTCTTGTGGTGAATGATCCGAATTTGAATCTCCACTGTTTGAGGTCAGAAAAAGAATaGCGTAAAATCATCTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: IKVLVLVVNDPNLNLHCLRSEKE*RKIIFA Trigger: GGCAAAGATGATTTTACGCCATTCTTTTTCTGACCT...CAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAACTTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR CAA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCCATTTCCCTCTCGTCTaGGAGAGAGCTTCTGGTTCG | + |
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Preference number: 3 (lower is better) Translates to: VPRGQDTEQALFSSQMVAHFPLV*ERASGS Trigger: CGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATG...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 72 bp | CATGGGCAGCTGATTTCTTGCTGCATCCTCAAGCATTaGAGGGGTGAAGGAGCTCTCTGGGGCCACCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: HGQLISCCILKH*RGEGALWGHLS Trigger: TGAAAGGTGGCCCCAGAGAGCTCCTTCACCCCTTCAATGCTTGAGGATGCAGCAAGAAATCAGCTGCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR GCA 72 bp | TCCCCCAACACACACCTCGATCTGAGAGGCAGGTTATaGTCCAGGAATAATTCCCTCCATCCTTCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SPNTHLDLRGRL*SRNNSLHPSWA Trigger: AGCCCAGGAAGGATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR GCA 72 bp | GGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTaGTTTTCCATTTTCAGCATTTCCCTCTCGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GTGSVQFTDGGQ*FSIFSISLSSW Trigger: CCAAGACGAGAGGGAAATGCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 72 bp | GAGGGCACTAATCCCATCATTTGGGCCCCATCCTCATaGTATGATCTAAACCTAATCACCTCCCAAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: EGTNPIIWAPSS*YDLNLITSQKP Trigger: GGGCTTTTGGGAGGTGATTAGGTTTAGATCATATCATGAGGATGGGGCCCAAATGATGGGATTAGTGCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 72 bp | GAGCTGCTGTTTCTTGGGAGGAAGGCAGATGTTTCATaGTCTCCCAGTACAGGTCAGAAAAAGAATGGCGTA | + |
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Preference number: 3 (lower is better) Translates to: ELLFLGRKADVS*SPSTGQKKNGV Trigger: TACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACATCTGCCTTCCTCCCAAGAAACAGCAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR GCA 72 bp | GTGAATGATCCGAATTTGAATCTCCACTGTTTGAGCTaGTGTTTCTTGGGAGGAAGGCAGATGTTTCATGAT | + |
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Preference number: 3 (lower is better) Translates to: VNDPNLNLHCLS*CFLGGRQMFHD Trigger: ATCATGAAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAAATTCGGATCATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR CCA 72 bp | TGTTTCATGATCTCCCAGTACAGGTCAGAAAAAGAATaGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: CFMISQYRSEKE*RKIIFAIESCQ Trigger: CTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTGCTGAGGCCTATTATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAATTTGAATCTCCACTGTTaGAGCTGCTGTTTCTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: KVAEAYYIRIKVLVLVVNLNLHC*SCCFLG Trigger: TCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAA...ATTCACCACAAGAACGAGAACTTTGATCCTTATATAATAGGCCTCAGCAACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 72 bp | TTATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAATaGTCCGAATTTGAATCTCCACTGTTTGAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LYKDQSSRSCGE*SEFESPLFELL Trigger: CAGCAGCTCAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAACTTTGATCCTTATATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| 3UTR TCA 72 bp | AGTTTATTAGTTCCCAGTATAACATCCCAAGGTTGCTaGGGCCTATTATATAAGGATCAAAGTTCTCGTTCT | + |
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Preference number: 3 (lower is better) Translates to: SLLVPSITSQGC*GLLYKDQSSRS Trigger: AGAACGAGAACTTTGATCCTTATATAATAGGCCTCAGCAACCTTGGGATGTTATACTGGGAACTAATAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | GTGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTGCTTGGCCGAGCCGCTaGACGTGCCCTCCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VVPAGVPRGQDTEQALFSAWPSR*TCPPPA Trigger: CGCTGGAGGAGGGCACGTTCAGCGGCTCGGCCAAGC...ACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGAAAGGGTCTGGCACGCTaGGCAGCCCGCGGTCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QQVYPGAKTRNRLCSVHRKGLAR*AARGRG Trigger: GCCGCGACCGCGGGCTGCCCAGCGTGCCAGACCCTT...TCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | TGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCAGGGGGAAAGGGTCTaGCACGCTGGGCAGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: WSQQVYPGAKTRNRLCSVQGERV*HAGQPA Trigger: CGCGGGCTGCCCAGCGTGCCAGACCCTTTCCCCCTG...AACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR GCA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACCGGGGATCCGCTGGATaGGGTTGCCGGCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHRGSAG*GCRPPA Trigger: TGCTGGTGGCCGGCAACCGCATCCAGCGGATCCCCG...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR GCA 90 bp | CCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCGGCCACCAGCAGCTTaGGCACGTCCAGGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PGAKTRNRLCSVHRWWPVRPPAA*ARPGGK Trigger: CTTTCCCCCTGGACGTGCGCAAGCTGCTGGTGGCCG...CACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR GCA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCTCCGCTGGATGCGGTTaGCGGCCACCAGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VPRGQDTEQALFSSQMVASAGCG*RPPAAC Trigger: GCAAGCTGCTGGTGGCCGGCAACCGCATCCAGCGGA...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | GTGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTCCCCACCCTGGCAGCTaGTTTCCGAGATCTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VVPAGVPRGQDTEQALFSPHPGS*FPRSGS Trigger: ACTGCCAGATCTCGGAAATCAGCTGCCAGGGTGGGG...ACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | GTGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTATGGCTGGGTTCTGGTaGGGGCCTGCTTCTCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VVPAGVPRGQDTEQALFSMAGFW*GPASRF Trigger: GAACCGAGAAGCAGGCCCTCACCAGAACCCAGCCAT...ACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | CCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCGCAGGGGTGGCCGAGTaGCCGTCGCCAAAACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PRHGTGSVQFTDGGQCFSAGVAE*PSPKRG Trigger: GCCGCGTTTTGGCGACGGCCACTCGGCCACCCCTGC...GGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR GCA 90 bp | TGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACCTCTGGAGGCACTaGACCACAGTGGCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: WSQQVYPGAKTRNRLCSVHLWRH*TTVARK Trigger: CTTCCTGGCCACTGTGGTGCAGTGCCTCCAGAGGTG...AACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | TGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTAACGCGGCCCCACCCTaGCAGCTGATTTCCGAGATC | + |
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Preference number: 4 (lower is better) Translates to: WSQQVYPGAKTRNRLCSVNAAPP*QLISEI Trigger: GATCTCGGAAATCAGCTGCCAGGGTGGGGCCGCGTT...AACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | CAGCATTTCCCTCTCGTCTTGGAGAGAGCTTCTGGTTCGGTGCTGGAGAGTAAGTCCTCGGGGATCCGCTaGATGCGGTTGCCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QHFPLVLERASGSVLESKSSGIR*MRLPAT Trigger: GGTGGCCGGCAACCGCATCCAGCGGATCCCCGAGGA...CTTACTCTCCAGCACCGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | TGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTTTGGGTGCGCACCTCTaGAGGCACTGCACCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: WSQQVYPGAKTRNRLCSVLGAHL*RHCTTV Trigger: CACTGTGGTGCAGTGCCTCCAGAGGTGCGCACCCAA...AACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR GCA 90 bp | TGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTGTTCTGGTGAGGGCCTaGTTCTCGGTTCATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WSQQVYPGAKTRNRLCSVVLVRA*FSVHGQ Trigger: CTGCCCATGAACCGAGAAGCAGGCCCTCACCAGAAC...AACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCTCCTCCTGCTCTCCATaGGCAGGGAGCACTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: VPRGQDTEQALFSSQMVASSCSP*AGSTGF Trigger: AAATCCAGTGCTCCCTGCCCATGGAGAGCAGGAGGA...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | CAGCATTTCCCTCTCGTCTTGGAGAGAGCTTCTGGTTCGGTGCTGGAGAGTAAGGCAGGTTGTTGTCGTTaGGCTCCAGCACCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: QHFPLVLERASGSVLESKAGCCR*APAPAA Trigger: CGCTGCAGGTGCTGGAGCTCAACGACAACAACCTGC...CTTACTCTCCAGCACCGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | CCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCGGTTCATGGGCAGCTaGTTTCTTGCTGCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGAKTRNRLCSVHRWWPVRFMGS*FLAASS Trigger: TGAGGATGCAGCAAGAAATCAGCTGCCCATGAACCG...CACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CCA 90 bp | TCAGCTATGAAGCCTGACTCGGTCATCTTCTCCCCCAACACACACCTCGATCTGCCTCCGCATCTTTGTTaGGTGCGCACCTCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SAMKPDSVIFSPNTHLDLPPHLC*VRTSGG Trigger: GCCTCCAGAGGTGCGCACCCAACAAAGATGCGGAGG...CAGATCGAGGTGTGTGTTGGGGGAGAAGATGACCGAGTCAGGCTTCATAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACTCAAGTTGTTGTAGCTaGGGTCGAGGAACACGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHSSCCS*GRGTRA Trigger: AGCTCGTGTTCCTCGACCTCAGCTACAACAACTTGA...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR TCA 90 bp | CCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCGGAAGAAGCTGGAGATaGTGGCCGCAATGGACACGG | + |
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Preference number: 4 (lower is better) Translates to: PRHGTGSVQFTDGGQCFSGRSWR*WPQWTR Trigger: CCGTGTCCATTGCGGCCATCATCTCCAGCTTCTTCC...GGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR GCA 90 bp | CCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTGAGAGGCAGGTTATaGTCCAGGAATAATTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAKTRNRLCSVHRWWPVLRGRL*SRNNSL Trigger: GAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAG...CACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | CAGCATTTCCCTCTCGTCTTGGAGAGAGCTTCTGGTTCGGTGCTGGAGAGTAAGGCTAGAAAAATCTCTTaGGAGAGGCGGGAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHFPLVLERASGSVLESKARKIS*ERRERQ Trigger: CTGCCGCTCCCGCCTCTCCCAAGAGATTTTTCTAGC...CTTACTCTCCAGCACCGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTTTCATCAAGGCCTTTaGGCAGTTTGGATGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPAGVPRGQDTEQALFSFHQGL*AVWMRS Trigger: AGAACGCATCCAAACTGCCCAAAGGCCTTGATGAAA...ACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | GGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCCTGGGGGTTGAGCTCCAGCACCTaGAGCGACTCCAGGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVKSSLPLKAASLHISWGLSSST*SDSRVS Trigger: CGAGACCCTGGAGTCGCTGCAGGTGCTGGAGCTCAA...CCCCCAGGAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | GGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCCTGGGGGGCAGGGATATCCTCCTaGTCTCCATGGGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVKSSLPLKAASLHISWGAGISS*SPWAGS Trigger: GCTCCCTGCCCATGGAGAGCAGGAGGATATCCCTGC...CCCCCAGGAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | AACATTGAGTCTATTGCACACGAGTTTATTAGTTCCCAGTATAACATCCCAAGGCGGGAGCGGCAGGGGTaGCCGAGTGGCCGTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NIESIAHEFISSQYNIPRRERQG*PSGRRQ Trigger: TTGGCGACGGCCACTCGGCCACCCCTGCCGCTCCCG...CCTTGGGATGTTATACTGGGAACTAATAAACTCGTGTGCAATAGACTCAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTCTTCACATTTCCTaGGGGAGGCTTTTAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VPRGQDTEQALFSSQMVASLHIS*GRLLVI Trigger: GATGACTAAAAGCCTCCCCCAGGAAATGTGAAGACT...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAATCATCTTTGCCATTaGAAGCTGCCAGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VPRGQDTEQALFSSQMVANHLCH*KLPVFT Trigger: TGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATT...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACACATCCCAAGGTTGCTaGGGCCTATTATATAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHTSQGC*GLLYKD Trigger: ATCCTTATATAATAGGCCTCAGCAACCTTGGGATGT...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACCCCATCCTCATGATATaGTCTAAACCTAATCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHPILMI*SKPNHL Trigger: GAGGTGATTAGGTTTAGATCATATCATGAGGATGGG...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | AACACACACCTCGATCTGAGAGGCAGGTTATGCTCCAGGAATAATTCCCTCCATGCAGCGAGTTGTTCCTaGAGTCCAGGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTHLDLRGRLCSRNNSLHAASCS*SPGRPG Trigger: ACCTGGTCTACCTGGACTTCAGGAACAACTCGCTGC...ATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | ATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTCCAGGGCGGCCACGCTaGGGCTGCGCAGGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MISQYRSEKEWRKIIFAIPGRPR*GCAGCC Trigger: ACAACAACCTGCGCAGCCTCAGCGTGGCCGCCCTGG...AATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | GGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCATTTTCAGCATCAGCTATGAAGCCTaGCTCGGTCATCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGSVQFTDGGQCFSIFSISYEA*LGHLLP Trigger: GGGGAGAAGATGACCGAGTCAGGCTTCATAGCTGAT...GCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | AGCATTTCCCTCTCGTCTTGGAGAGAGCTTCTGGTTCGGTGCTGGAGAGTAAGATTTGGGCAGTTTGGATaGGTTCTCCTGGATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SISLSSWRELLVRCWRVRFGQFG*VLLDPG Trigger: TCCTGGATCCAGGAGAACGCATCCAAACTGCCCAAA...TCTTACTCTCCAGCACCGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | AACACACACCTCGATCTGAGAGGCAGGTTATGCTCCAGGAATAATTCCCTCCATGAGCTTCTGGTTCGGTaGTGGAGAGTAAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTHLDLRGRLCSRNNSLHELLVR*WRVRGR Trigger: CCTGCCTCTTACTCTCCAGCACCGAACCAGAAGCTC...ATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | CTCCACTGTTTGAGCTGCTGTTTCTTGGGAGGAAGGCAGATGTTTCATGATCTCGGCCTTTGGGCAGTTTaGATGCGTTCTCCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LHCLSCCFLGGRQMFHDLGLWAV*MRSPGS Trigger: GGATCCAGGAGAACGCATCCAAACTGCCCAAAGGCC...GAGATCATGAAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCCCAACACACACCTCGATCTGAGAGGCAGGTTATGCTCCAGGAATAATGCTGATTCTAAACTCTaGGATCAGTGGTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTHLDLRGRLCSRNNADSKL*DQWSQQ Trigger: CTGCTGGGACCACTGATCTCAGAGTTTAGAATCAGC...ATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTTGGGGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | AGCATTTCCCTCTCGTCTTGGAGAGAGCTTCTGGTTCGGTGCTGGAGAGTAAGAAAGGCAGATGTTTCATaGTCTCCCAGTACAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SISLSSWRELLVRCWRVRKADVS*SPSTGQ Trigger: CTGACCTGTACTGGGAGATCATGAAACATCTGCCTT...TCTTACTCTCCAGCACCGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | GGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCCTGGGGGTTGGATGCGTTCTCCTaGATCCAGGAGAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKSSLPLKAASLHISWGLDAFS*IQEKRW Trigger: CCACCTCTTCTCCTGGATCCAGGAGAACGCATCCAA...CCCCCAGGAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | GTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGGTCAGAAAAAGAATaGCGTAAAATCATCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPRGQDTEQALFSSQMVARSEKE*RKIIFA Trigger: GGCAAAGATGATTTTACGCCATTCTTTTTCTGACCT...GGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGCTGAGGCCTATTATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAATGGGTGCCAGCATGGCTaGGTTCTGGTGAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVAEAYYIRIKVLVLVVNGCQHG*VLVRAC Trigger: GCAGGCCCTCACCAGAACCCAGCCATGCTGGCACCC...ATTCACCACAAGAACGAGAACTTTGATCCTTATATAATAGGCCTCAGCAACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | CAGCATTTCCCTCTCGTCTTGGAGAGAGCTTCTGGTTCGGTGCTGGAGAGTAAGCGTTCTTGTGGTGAATaGTCCGAATTTGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHFPLVLERASGSVLESKRSCGE*SEFESP Trigger: TGGAGATTCAAATTCGGATCATTCACCACAAGAACG...CTTACTCTCCAGCACCGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | GGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCATTTTCAGCCTTCCTGGGCTTCTGTaGTCTGCTGATTCTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGSVQFTDGGQCFSIFSLPGLL*SADSKL Trigger: GAGTTTAGAATCAGCAGAGCACAGAAGCCCAGGAAG...GCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | AACACACACCTCGATCTGAGAGGCAGGTTATGCTCCAGGAATAATTCCCTCCATCTCCACTGTTTGAGCTaGTGTTTCTTGGGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTHLDLRGRLCSRNNSLHLHCLS*CFLGGR Trigger: CCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAG...ATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | ATCAAAGTTCTCGTTCTTGTGGTGAATGATCCGAATTTGAATCTCCACTGTTTGTCGAAGGCGTCCTCGTaGACGCCCACCAGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKVLVLVVNDPNLNLHCLSKASS*TPTRLL Trigger: CAACAACCTGGTGGGCGTGCACGAGGACGCCTTCGA...CAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAACTTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | AAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCGGTCGCCGTAGAAGATaGAGAAGTCCTCGGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: KEWRKIIFAIESCQSSHFGRRRR*RSPRGS Trigger: GGATCCCCGAGGACTTCTTCATCTTCTACGGCGACC...GAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR TCA 90 bp | CAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCGCAGAGGTCTGTGAGTaGCAGGCTGAACCTACACTC | + |
|
Preference number: 4 (lower is better) Translates to: QYRSEKEWRKIIFAIESCAEVCE*QAEPTL Trigger: GAGTGTAGGTTCAGCCTGTCACTCACAGACCTCTGC...GCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | ATCAAAGTTCTCGTTCTTGTGGTGAATGATCCGAATTTGAATCTCCACTGTTTGGGCACTGCACCACAGTaGCCAGGAAGAAGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKVLVLVVNDPNLNLHCLGTAPQ*PGRSWR Trigger: TCTCCAGCTTCTTCCTGGCCACTGTGGTGCAGTGCC...CAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAACTTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | TGTTTCATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTCGCATCTTTGTTGGGTaGGCACCTCTGGAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CFMISQYRSEKEWRKIIFRIFVG*APLEAL Trigger: CAGTGCCTCCAGAGGTGCGCACCCAACAAAGATGCG...AAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | AACACACACCTCGATCTGAGAGGCAGGTTATGCTCCAGGAATAATTCCCTCCATTTTGCCATTGAAAGCTaGCAGTCTTCACATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTHLDLRGRLCSRNNSLHFAIES*QSSHFL Trigger: CAGGAAATGTGAAGACTGGCAGCTTTCAATGGCAAA...ATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTCATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTCTTCTGGTTCGGTGCTaGAGAGTAAGAGGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFMISQYRSEKEWRKIIFLLVRC*RVRGRR Trigger: CCTCCTGCCTCTTACTCTCCAGCACCGAACCAGAAG...AAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| 3UTR CAA 72 bp | CTTGTGGTGAATGATCCGAATTTGAATCTCCACTGTTaGAGCTGCTGTTTCTTGGGAGGAAGGCAGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVVNDPNLNLHC*SCCFLGGRQMF Trigger: AAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTCATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTATGGGCAGGGAGCACTaGATTTCATCAAGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CFMISQYRSEKEWRKIIFMGREH*ISSRPL Trigger: CAAAGGCCTTGATGAAATCCAGTGCTCCCTGCCCAT...AAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| 3UTR CAA 72 bp | ATCAAAGTTCTCGTTCTTGTGGTGAATGATCCGAATTaGAATCTCCACTGTTTGAGCTGCTGTTTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKVLVLVVNDPN*NLHCLSCCFLG Trigger: TCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAAATTCGGATCATTCACCACAAGAACGAGAACTTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCACAGATGGTGGCCAGTaGTTTTCCATTTTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KEWRKIIFAIESCQSSHFTDGGQ*FSIFSI Trigger: AATGCTGAAAATGGAAAAGCACTGGCCACCATCTGT...GAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTCATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTTGTTCAGTTCACAGATaGTGGCCAGTGCTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFMISQYRSEKEWRKIIFCSVHR*WPVLFH Trigger: ATGGAAAAGCACTGGCCACCATCTGTGAACTGAACA...AAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCATGAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS GCA 90 bp | TCCACGGTGTGCGGGTCGGTGCAGGCGCAGCCCGCGGGGCACGCGTaGCCGGGCGCGAGCAGCAGCAGAAGGCTGCAGAGCCCGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: STVCGSVQAQPAGHA*PGASSSRRLQSPSA Trigger: GGCGCTCGGGCTCTGCAGCCTTCTGCTGCTGCTCGCGCCCGGGCACGCGTGCCCCGCGGGCTGCGCCTGCACCGACCCGCACACCGTGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS CCA 90 bp | CCACCAGCAGCTTGCGCACGTCCAGGGGGAAAGGGTCTGGCACGCTaGGCAGCCCGCGGTCGCGGCAGTCCACGGTGTGCGGGTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPAACARPGGKGLAR*AARGRGSPRCAGRC Trigger: GCACCGACCCGCACACCGTGGACTGCCGCGACCGCGGGCTGCCCAGCGTGCCAGACCCTTTCCCCCTGGACGTGCGCAAGCTGCTGGTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS CCA 90 bp | GTTGCCGGCCACCAGCAGCTTGCGCACGTCCAGGGGGAAAGGGTCTaGCACGCTGGGCAGCCCGCGGTCGCGGCAGTCCACGGTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VAGHQQLAHVQGERV*HAGQPAVAAVHGVR Trigger: CCGCACACCGTGGACTGCCGCGACCGCGGGCTGCCCAGCGTGCCAGACCCTTTCCCCCTGGACGTGCGCAAGCTGCTGGTGGCCGGCAAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS TCA 90 bp | GGTGGCCGAGTGGCCGTCGCCAAAACGCGGCCCCACCCTGGCAGCTaGTTTCCGAGATCTGGCAGTAAGACGCCGCGCGCACCGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRVAVAKTRPHPGS*FPRSGSKTPRAPGG Trigger: CCCGCCCGGTGCGCGCGGCGTCTTACTGCCAGATCTCGGAAATCAGCTGCCAGGGTGGGGCCGCGTTTTGGCGACGGCCACTCGGCCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS GCA 90 bp | GCCACGCTGAGGCTGCGCAGGTTGTTGTCGTTGAGCTCCAGCACCTaGAGCGACTCCAGGGTCTCGAAGGCGTCCTCGTGCACGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ATLRLRRLLSLSSST*SDSRVSKASSCTPT Trigger: GGTGGGCGTGCACGAGGACGCCTTCGAGACCCTGGAGTCGCTGCAGGTGCTGGAGCTCAACGACAACAACCTGCGCAGCCTCAGCGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACCCGGCCACCAGCAGCTaGCGCACGTCCAGGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHPATSS*RTSRGK Trigger: TTTCCCCCTGGACGTGCGCAAGCTGCTGGTGGCCGG...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGTCGAGGAACACGAGCTaGGCCGAGCCGCTGAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGAKTRNRLCSVHRWWPVSRNTS*AEPLNV Trigger: CACGTTCAGCGGCTCGGCCAAGCTCGTGTTCCTCGA...CACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACCGCAGGTTGTTGTCGTaGAGCTCCAGCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHRRLLS*SSSTCS Trigger: GCTGCAGGTGCTGGAGCTCAACGACAACAACCTGCG...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACTCCTCCGCATCTTTGTaGGGTGCGCACCTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQQVYPGAKTRNRLCSVHSSASL*GAHLWR Trigger: CCTCCAGAGGTGCGCACCCAACAAAGATGCGGAGGA...GTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
||
| CDS CCA 90 bp | AGCTGGCCTCCGACAGCTCACGCAGGGATATCCTCCTGCTCTCCATaGGCAGGGAGCACTGGATTTCATCAAGGCCTTTGGGCAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWPPTAHAGISSCSP*AGSTGFHQGLWAVW Trigger: CCAAACTGCCCAAAGGCCTTGATGAAATCCAGTGCTCCCTGCCCATGGAGAGCAGGAGGATATCCCTGCGTGAGCTGTCGGAGGCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS TCA 90 bp | GGACACGGCCACACCGGAGAAAATGATGATGCAGAGGTCTGTGAGTaGCAGGCTGAACCTACACTCGCTGAAGCTGGCCTCCGACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GHGHTGENDDAEVCE*QAEPTLAEAGLRQL Trigger: GAGCTGTCGGAGGCCAGCTTCAGCGAGTGTAGGTTCAGCCTGTCACTCACAGACCTCTGCATCATCATTTTCTCCGGTGTGGCCGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CCA 90 bp | TTGTCCTCGTCTTCATCCTCCGCATCTTTGTTGGGTGCGCACCTCTaGAGGCACTGCACCACAGTGGCCAGGAAGAAGCTGGAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LSSSSSSASLLGAHL*RHCTTVARKKLEMM Trigger: CATCATCTCCAGCTTCTTCCTGGCCACTGTGGTGCAGTGCCTCCAGAGGTGCGCACCCAACAAAGATGCGGAGGATGAAGACGAGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTCACAGACATTTCCCTCTCGTCTaGGAGAGAGCTTCTGGTTCG | + |
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Preference number: 5 (lower is better) Translates to: QQVYPGAKTRNRLCSVHRHFPLV*ERASGS Trigger: CGAACCAGAAGCTCTCTCCAAGACGAGAGGGAAATG...TCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | TGGTCCCAGCAGGTGTACCCAGGGGCCAAGACACGGAACAGGCTCTGTTCAGTTATTTCATCAAGGCCTTaGGGCAGTTTGGATGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: WSQQVYPGAKTRNRLCSVISSRP*GSLDAF Trigger: GAACGCATCCAAACTGCCCAAAGGCCTTGATGAAAT...AACTGAACAGAGCCTGTTCCGTGTCTTGGCCCCTGGGTACACCTGCTGGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | GGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCATTTTCAGCTCATCCTCCGCATCTTaGTTGGGTGCGCACCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GTGSVQFTDGGQCFSIFSSSSAS*LGAHLW Trigger: CCAGAGGTGCGCACCCAACAAAGATGCGGAGGATGA...GCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | CAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCATCCGCTGGATGCGGTaGCCGGCCACCAGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: QYRSEKEWRKIIFAIESCIRWMR*PATSSL Trigger: CAAGCTGCTGGTGGCCGGCAACCGCATCCAGCGGAT...GCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | CCAAGACACGGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCTTGAGCTGCTGTTTCTaGGGAGGAAGGCAGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: PRHGTGSVQFTDGGQCFSLSCCF*GGRQMF Trigger: AAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAA...GGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCCGTGTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | CAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCCTGAGGCTGCGCAGGTaGTTGTCGTTGAGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QYRSEKEWRKIIFAIESCLRLRR*LSLSSS Trigger: GCTGGAGCTCAACGACAACAACCTGCGCAGCCTCAG...GCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | CTCCACTGTTTGAGCTGCTGTTTCTTGGGAGGAAGGCAGATGTTTCATGATCTCTGGGCAGCTGATTTCTaGCTGCATCCTCAAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: LHCLSCCFLGGRQMFHDLWAADF*LHPQAL Trigger: CAATGCTTGAGGATGCAGCAAGAAATCAGCTGCCCA...GAGATCATGAAACATCTGCCTTCCTCCCAAGAAACAGCAGCTCAAACAGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | AAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCTGCACGCCCACCAGGTaGTTGTTAGCCAGGCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: KEWRKIIFAIESCQSSHFCTPTR*LLARLS Trigger: GCTTAGCCTGGCTAACAACAACCTGGTGGGCGTGCA...GAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | GGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCATTTTCAGCAAATCATCTTTGCCATaGAAAGCTGCCAGTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: GTGSVQFTDGGQCFSIFSKSSLP*KAASLH Trigger: GTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTT...GCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | ATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTACGCCCACCAGGTTGTaGTTAGCCAGGCTAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: MISQYRSEKEWRKIIFAITPTRL*LARLSF Trigger: GAAGCTTAGCCTGGCTAACAACAACCTGGTGGGCGT...AATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | AAAGAATGGCGTAAAATCATCTTTGCCATTGAAAGCTGCCAGTCTTCACATTTCGTGGCTCAGTCATCCTaGTCCTCGTCTTCATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KEWRKIIFAIESCQSSHFVAQSS*SSSSSS Trigger: GGAGGATGAAGACGAGGACAAGGATGACTGAGCCAC...GAAATGTGAAGACTGGCAGCTTTCAATGGCAAAGATGATTTTACGCCATTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | GGAACAGGCTCTGTTCAGTTCACAGATGGTGGCCAGTGCTTTTCCATTTTCAGCCCAAATACCATCACATaGGGGATTAGGTTTCAACAT | + |
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Preference number: 5 (lower is better) Translates to: GTGSVQFTDGGQCFSIFSPNTIT*GIRFQH Trigger: ATGTTGAAACCTAATCCCCAATGTGATGGTATTTGG...GCTGAAAATGGAAAAGCACTGGCCACCATCTGTGAACTGAACAGAGCCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | ATGATCTCCCAGTACAGGTCAGAAAAAGAATGGCGTAAAATCATCTTTGCCATTTTGAATCTCCACTGTTaGAGCTGCTGTTTCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: MISQYRSEKEWRKIIFAILNLHC*SCCFLG Trigger: TCCCAAGAAACAGCAGCTCAAACAGTGGAGATTCAA...AATGGCAAAGATGATTTTACGCCATTCTTTTTCTGACCTGTACTGGGAGATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS-3UTR CAA 90 bp | AAGGTTGCTGAGGCCTATTATATAAGGATCAAAGTTCTCGTTCTTGTGGTGAATGTGAATGATCCGAATTaGAATCTCCACTGTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: KVAEAYYIRIKVLVLVVNVNDPN*NLHCLS Trigger: GCTCAAACAGTGGAGATTCAAATTCGGATCATTCAC...ATTCACCACAAGAACGAGAACTTTGATCCTTATATAATAGGCCTCAGCAACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CCA 72 bp | GCTTGCGCACGTCCAGGGGGAAAGGGTCTGGCACGCTaGGCAGCCCGCGGTCGCGGCAGTCCACGGTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: ACARPGGKGLAR*AARGRGSPRCA Trigger: CGCACACCGTGGACTGCCGCGACCGCGGGCTGCCCAGCGTGCCAGACCCTTTCCCCCTGGACGTGCGCAAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CCA 72 bp | CACCAGCAGCTTGCGCACGTCCAGGGGGAAAGGGTCTaGCACGCTGGGCAGCCCGCGGTCGCGGCAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HQQLAHVQGERV*HAGQPAVAAVH Trigger: GTGGACTGCCGCGACCGCGGGCTGCCCAGCGTGCCAGACCCTTTCCCCCTGGACGTGCGCAAGCTGCTGGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS GCA 72 bp | GGATCCGCTGGATGCGGTTGCCGGCCACCAGCAGCTTaGGCACGTCCAGGGGGAAAGGGTCTGGCACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSAGCGCRPPAA*ARPGGKGLARW Trigger: CCAGCGTGCCAGACCCTTTCCCCCTGGACGTGCGCAAGCTGCTGGTGGCCGGCAACCGCATCCAGCGGATCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CAA 72 bp | GGGATCCGCTGGATGCGGTTGCCGGCCACCAGCAGCTaGCGCACGTCCAGGGGGAAAGGGTCTGGCACGCTG | + |
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Preference number: 6 (lower is better) Translates to: GIRWMRLPATSS*RTSRGKGSGTL Trigger: CAGCGTGCCAGACCCTTTCCCCCTGGACGTGCGCAAGCTGCTGGTGGCCGGCAACCGCATCCAGCGGATCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS TCA 72 bp | GTGGCCGTCGCCAAAACGCGGCCCCACCCTGGCAGCTaGTTTCCGAGATCTGGCAGTAAGACGCCGCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: VAVAKTRPHPGS*FPRSGSKTPRA Trigger: TGCGCGCGGCGTCTTACTGCCAGATCTCGGAAATCAGCTGCCAGGGTGGGGCCGCGTTTTGGCGACGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CAA 90 bp | GACTCCAGGGTCTCGAAGGCGTCCTCGTGCACGCCCACCAGGTTGTaGTTAGCCAGGCTAAGCTTCACCAGCCTCCCGGCCGAGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: DSRVSKASSCTPTRL*LARLSFTSLPAERK Trigger: CTTCCGCTCGGCCGGGAGGCTGGTGAAGCTTAGCCTGGCTAACAACAACCTGGTGGGCGTGCACGAGGACGCCTTCGAGACCCTGGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS GCA 72 bp | AGGCTGCGCAGGTTGTTGTCGTTGAGCTCCAGCACCTaGAGCGACTCCAGGGTCTCGAAGGCGTCCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RLRRLLSLSSST*SDSRVSKASSC Trigger: GCACGAGGACGCCTTCGAGACCCTGGAGTCGCTGCAGGTGCTGGAGCTCAACGACAACAACCTGCGCAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CAA 72 bp | GTCTCGAAGGCGTCCTCGTGCACGCCCACCAGGTTGTaGTTAGCCAGGCTAAGCTTCACCAGCCTCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSKASSCTPTRL*LARLSFTSLPA Trigger: GGCCGGGAGGCTGGTGAAGCTTAGCCTGGCTAACAACAACCTGGTGGGCGTGCACGAGGACGCCTTCGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS GCA 72 bp | ACCTGCAGCGACTCCAGGGTCTCGAAGGCGTCCTCGTaGACGCCCACCAGGTTGTTGTTAGCCAGGCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: TCSDSRVSKASS*TPTRLLLARLS Trigger: GCTTAGCCTGGCTAACAACAACCTGGTGGGCGTGCACGAGGACGCCTTCGAGACCCTGGAGTCGCTGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS GCA 72 bp | CTTGTCCTCGTCTTCATCCTCCGCATCTTTGTTGGGTaGGCACCTCTGGAGGCACTGCACCACAGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVLVFILRIFVG*APLEALHHSGQ Trigger: CTGGCCACTGTGGTGCAGTGCCTCCAGAGGTGCGCACCCAACAAAGATGCGGAGGATGAAGACGAGGACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS GCA 72 bp | AGCTGGCCTCCGACAGCTCACGCAGGGATATCCTCCTaGTCTCCATGGGCAGGGAGCACTGGATTTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: SWPPTAHAGISS*SPWAGSTGFHQ Trigger: TTGATGAAATCCAGTGCTCCCTGCCCATGGAGAGCAGGAGGATATCCCTGCGTGAGCTGTCGGAGGCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CCA 72 bp | TCTTCATCCTCCGCATCTTTGTTGGGTGCGCACCTCTaGAGGCACTGCACCACAGTGGCCAGGAAGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSASLLGAHL*RHCTTVARKKL Trigger: CAGCTTCTTCCTGGCCACTGTGGTGCAGTGCCTCCAGAGGTGCGCACCCAACAAAGATGCGGAGGATGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS CCA 72 bp | AGGGATATCCTCCTGCTCTCCATGGGCAGGGAGCACTaGATTTCATCAAGGCCTTTGGGCAGTTTGGATGCG | + |
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Preference number: 6 (lower is better) Translates to: RDILLLSMGREH*ISSRPLGSLDA Trigger: CGCATCCAAACTGCCCAAAGGCCTTGATGAAATCCAGTGCTCCCTGCCCATGGAGAGCAGGAGGATATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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| CDS TCA 72 bp | CACACCGGAGAAAATGATGATGCAGAGGTCTGTGAGTaGCAGGCTGAACCTACACTCGCTGAAGCTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: HTGENDDAEVCE*QAEPTLAEAGL Trigger: GAGGCCAGCTTCAGCGAGTGTAGGTTCAGCCTGTCACTCACAGACCTCTGCATCATCATTTTCTCCGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376085.4 |
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