RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC36 (Homo sapiens)

Ensembl gene IDs: ENSG00000159708

Ensembl transcript IDs: ENST00000329956.11, ENST00000435835.3, ENST00000561821.1, ENST00000563189.5, ENST00000563303.5, ENST00000565019.6, ENST00000566558.1, ENST00000567211.5, ENST00000567723.5, ENST00000567823.5, ENST00000568010.5, ENST00000568804.6, ENST00000569121.1, ENST00000569228.6, ENST00000569552.5, ENST00000570075.5

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTaGTGTGAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: TGGNGGESLCGPGKL*CEFHASSISQALGQ
Trigger: CTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTCACACCACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
3UTR GCA 90 bp CCGAGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACA +
Preference number: 1 (lower is better)
Translates to: PRNFLLRRREPEPFQ*LSTSSRSCLRTVAT
Trigger: TGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR TCA 90 bp TTCAAGCTCCCTCCTGCAGAATGCTTTCATCGTGTCTTCAGGATGTaGGCAACACCTCGGCTGAGAAGGAGCCGGGACTACCAAAGACAG +
Preference number: 1 (lower is better)
Translates to: FKLPPAECFHRVFRM*ATPRLRRSRDYQRQ
Trigger: CTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR TCA 90 bp AAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTaGCCAGTCTCATGTGCCACTGGTGAGGAGGAAGACAACGTGCTT +
Preference number: 1 (lower is better)
Translates to: KPGSGAASKTLCIRY*PVSCATGEEEDNVL
Trigger: AAGCACGTTGTCTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR TCA 90 bp CAGAATGCTTTCATCGTGTCTTCAGGATGTGAGCAACACCTCGGCTaGGAAGGAGCCGGGACTACCAAAGACAGAAGCAAATCTCGGGCA +
Preference number: 1 (lower is better)
Translates to: QNAFIVSSGCEQHLG*EGAGTTKDRSKSRA
Trigger: TGCCCGAGATTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR GCA 90 bp GATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATGATCTCCCCAGATGATGACCCTTCT +
Preference number: 1 (lower is better)
Translates to: DTDQSHVPLVRRKTT*FSQRAMISPDDDPS
Trigger: AGAAGGGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CCA 90 bp AGAATGGCAACTGTCTTCTCCAGCTTTTTCAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGC +
Preference number: 1 (lower is better)
Translates to: RMATVFSSFFSWASS*FRQATCMVSCWFLC
Trigger: GCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGAGAAGACAGTTGCCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CCA 90 bp ACGAGGCGAGTAGTGTCTGAACTCATCTTCCTGGTGATTGTCACTTaGCATCTCCCTTCTTGCTACTTCCTGTGTCTGTGTCCCCAGTGG +
Preference number: 1 (lower is better)
Translates to: TRRVVSELIFLVIVT*HLPSCYFLCLCPQW
Trigger: CCACTGGGGACACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAGGAAGATGAGTTCAGACACTACTCGCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561821.1
3UTR TCA 90 bp GAACCACCTCCATTCCCAACAGAACCCTCATTCTGGTCTCGAACCTaGCCTGTTTCTCGCACAAACACAAACAAGCCAACACTTGCCTCG +
Preference number: 1 (lower is better)
Translates to: EPPPFPTEPSFWSRT*PVSRTNTNKPTLAS
Trigger: CGAGGCAAGTGTTGGCTTGTTTGTGTTTGTGCGAGAAACAGGTCAGGTTCGAGACCAGAATGAGGGTTCTGTTGGGAATGGAGGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR CCA 90 bp GCTTTTTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTG +
Preference number: 1 (lower is better)
Translates to: AFSAGQAPGSGKPPA*SAVGFCAEDHHKYV
Trigger: CACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR GCA 90 bp GTGTCCCCAGTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGT +
Preference number: 1 (lower is better)
Translates to: VSPVGRCLISDHVYH*PELQKYLGNPLFPG
Trigger: ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCACTGGGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000567211.5
3UTR CCA 90 bp ACAAACACAAACAAGCCAACACTTGCCTCGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTCAGGTTGGCAAGGATATTGTCCTTC +
Preference number: 1 (lower is better)
Translates to: TNTNKPTLASLPVAS*KPCFRFRLARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR GCA 90 bp GAACCATGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTaGTCTACATTGACAAGTACAGCAGGGTCACTGTTGAAATGGGTT +
Preference number: 1 (lower is better)
Translates to: EPCAGVKSSRLVDNC*STLTSTAGSLLKWV
Trigger: AACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR GCA 90 bp CACAGGAATGTGAAGCGGTGGTCTTTATGTCATTTGAAGGCTTTATaGTATACTCTTGATAGTTCTTGCTTCTCTGAGGCCTTTTACCAA +
Preference number: 1 (lower is better)
Translates to: HRNVKRWSLCHLKAL*YTLDSSCFSEAFYQ
Trigger: TTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAGCCTTCAAATGACATAAAGACCACCGCTTCACATTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR GCA 90 bp TCTTTATGTCATTTGAAGGCTTTATGCTATACTCTTGATAGTTCTTaGTTCTCTGAGGCCTTTTACCAAGACTTCCATGCAGGGATAGAG +
Preference number: 1 (lower is better)
Translates to: SLCHLKALCYTLDSS*FSEAFYQDFHAGIE
Trigger: CTCTATCCCTGCATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAGCCTTCAAATGACATAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR CCA 90 bp GGTTTGACAGAGAAGTTAATAAGTCTCCACAGGAATGTGAAGCGGTaGTCTTTATGTCATTTGAAGGCTTTATGCTATACTCTTGATAGT +
Preference number: 1 (lower is better)
Translates to: GLTEKLISLHRNVKR*SLCHLKALCYTLDS
Trigger: ACTATCAAGAGTATAGCATAAAGCCTTCAAATGACATAAAGACCACCGCTTCACATTCCTGTGGAGACTTATTAACTTCTCTGTCAAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR TCA 90 bp CTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 2 (lower is better)
Translates to: LVEEEGAGAIPVLIHKLQWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...CTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
3UTR-3UTR CCA 90 bp AGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: RREPEPFQCLSTSSRSCLGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...CAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp ATGCTTTCATCGTGTCTTCAGGATGTGAGCAACACCTCGGCTGAGAAGGAGCCGTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 2 (lower is better)
Translates to: MLSSCLQDVSNTSAEKEPWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...CGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR-3UTR TCA 90 bp TTTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: FQLGKLLVQASHLHGQLLRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...CAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp GCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: ASSWFRQATCMVSCWFLCRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...GCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp CCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACACGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: PFQCLSTSSRSCLRTVATRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...TGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp GCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAAGGACAGTGGCCACATaGGGGGTTCTCGCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: AGALSRNNLLAPYSAAAARTVAT*GVLAAC
Trigger: ACAGGCAGCGAGAACCCCCCATGTGGCCACTGTCCT...TGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565019.6
3UTR-3UTR CCA 90 bp AGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: SQALGQHPRRSVLDTDQSSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...AGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp CCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACAAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 2 (lower is better)
Translates to: PFQCLSTSSRSCLRTVATRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...TGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
3UTR-3UTR GCA 90 bp TGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: WASSWFRQATCMVSCWFLPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...CAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp TCGGCTGAGAAGGAGCCGGGACTACCAAAGACAGAAGCAAATCTCGGGCAGGACCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SAEKEPGLPKTEANLGQDQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...GTCCTGCCCGAGATTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565019.6
3UTR-3UTR CCA 90 bp GAAGTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: EVPGDNSSVRRGVVLFPRQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...CCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp TGGTGTGAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGAGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: WCEFHASSISQALGQHPRGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...TCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTCACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp AGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: SQALGQHPRRSVLDTDQSGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...AGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp GAGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 2 (lower is better)
Translates to: EKLLVEEEGAGAIPVLIHRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...GTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 2 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
3UTR-3UTR TCA 90 bp GGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 2 (lower is better)
Translates to: GKPPAWSAVGFCAEDHHKWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...CTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
3UTR-3UTR TCA 90 bp CCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACATTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 2 (lower is better)
Translates to: PFQCLSTSSRSCLRTVATFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...TGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp TTTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: FQLGKLLVQASHLHGQLLGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...CAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp CGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: RFPGITFWLLIQLLQQILSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...GAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGACGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 2 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR CAA 90 bp AACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGTGCTGGTGTTAAATCATCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: NSSVRRGVVLFPRTA*FGTEPCAGVKSSRL
Trigger: CAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp GTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTCCAACTGTCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VCDCCPLTIEMAAPSSNCPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...ACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp TGGTGTGAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGATTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTC +
Preference number: 2 (lower is better)
Translates to: WCEFHASSISQALGQHPRFPAKP*KLPRSL
Trigger: GAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...TCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTCACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568010.5
3UTR-3UTR CCA 90 bp GTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 2 (lower is better)
Translates to: VEEEGAGAIPVLIHKLQELPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...CTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp TTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACATGGAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 2 (lower is better)
Translates to: FQCLSTSSRSCLRTVATWNLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...CCATGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp AGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTGTTCAAGCTCCCTCCTaGAGAATGCTTTCATCGTGT +
Preference number: 2 (lower is better)
Translates to: SQALGQHPRRSVLDTDQSVQAPS*RMLSSC
Trigger: ACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAAC...AGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR-3UTR CCA 90 bp TTTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 2 (lower is better)
Translates to: FQLGKLLVQASHLHGQLLLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...CAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp GATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: DDDPSQEAGALSRNNLLAFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...AGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp AGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTGAAATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 2 (lower is better)
Translates to: SHLLWGSDCGLTRRVVSEISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...TTCAGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000569552.5
3UTR-3UTR TCA 90 bp ATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACATGAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 2 (lower is better)
Translates to: IPVLIHKLQELSEDSGHMKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...CATGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR TCA 90 bp GTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCCAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 2 (lower is better)
Translates to: VQASHLHGQLLVFVQKIIQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...GATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR GCA 90 bp CGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCCTCCCTCCTGCAGAATaGTTTCATCGTGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RFPGITFWLLIQLLQQILLPPAE*FHRVFR
Trigger: CCTGAAGACACGATGAAAGCATTCTGCAGGAGGGAG...GAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR-3UTR CCA 90 bp GAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTTGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 2 (lower is better)
Translates to: EFHASSISQALGQHPRRSCMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...AGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp CATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTATATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 2 (lower is better)
Translates to: HASSISQALGQHPRRSVLYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...TAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp TACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCAGCTTTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: YHQGSLTFMENGNCLLQLFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...AAGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp TTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCGAGAAACTTCTTGTAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 2 (lower is better)
Translates to: FLQHSDQFLLQTFRETSCRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...ACAAGAAGTTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
3UTR CAA 90 bp GTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VGRCLISDHVYHCPE*QKYLGNPLFPGWGR
Trigger: CCTTCCCCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
3UTR CAA 90 bp GGCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGG +
Preference number: 2 (lower is better)
Translates to: GSLPVASWKPCFRFR*ARILSFHLNPLFDG
Trigger: CCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR CAA 90 bp GCCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGG +
Preference number: 2 (lower is better)
Translates to: ASLPVASWKPCFRFR*ARILSFHLNPLFDG
Trigger: CCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR GCA 90 bp GATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTACTCTTGATAGTTCTTaGTTCTCTGAGGCCTTTTAC +
Preference number: 2 (lower is better)
Translates to: DDDPSQEAGALSRNNLLATLDSS*FSEAFY
Trigger: GTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGT...AGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR GCA 90 bp TACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCAGCTTTCAAAAGCCTTCCAGTaGTGGAGTCAGGGTTTGACA +
Preference number: 2 (lower is better)
Translates to: YHQGSLTFMENGNCLLQLSKAFQ*WSQGLT
Trigger: TGTCAAACCCTGACTCCAGCACTGGAAGGCTTTTGA...AAGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: FRLARILSFHLNPLFDGLQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp CATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: HPRRSVLDTDQSHVPLVRDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...CCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CAA 90 bp CACTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGG +
Preference number: 2 (lower is better)
Translates to: HSLPVASWKPCFRFR*ARILSFHLNPLFDG
Trigger: CCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568010.5
3UTR CAA 90 bp GTAGATAATTGTTGCTCTACATTGACAAGTACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATACAGATCTGTGTCCCCAGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VDNCCSTLTSTAGSL*KWVVAYRSVSPVGR
Trigger: CCTTCCCACTGGGGACACAGATCTGTATGCCACAACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR TCA 90 bp CATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGGGAATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 2 (lower is better)
Translates to: HCPELQKYLGNPLFPGWGISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...TCCCCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
3UTR-3UTR TCA 90 bp ATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTACACGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 2 (lower is better)
Translates to: ILLSTLALTFDAELSPVTRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...TGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
3UTR-3UTR GCA 90 bp GGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 2 (lower is better)
Translates to: GKPPAWSAVGFCAEDHHKGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...CTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp GGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGCAGAAGTACGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 2 (lower is better)
Translates to: GRCLISDHVYHCPELQKYDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...GTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000567723.5
ENST00000570075.5
3UTR-3UTR GCA 90 bp TGGTGTGAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGAACTCTGACCAGTTTTTaGTTCAAACTTTCCGAGAAA +
Preference number: 2 (lower is better)
Translates to: WCEFHASSISQALGQHPRTLTSF*FKLSEK
Trigger: TTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...TCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTCACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAAACAAGCCAACACTTaGCTCGCTGCCTGTAGCATC +
Preference number: 2 (lower is better)
Translates to: FRLARILSFHLNPLFDGLKQANT*LAACSI
Trigger: GATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTT...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR CCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: FRLARILSFHLNPLFDGLGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp CCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 2 (lower is better)
Translates to: PPAWSAVGFCAEDHHKYVSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...CACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CCA 90 bp AGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCCATGCAGGGATAGAGTTTTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 2 (lower is better)
Translates to: SSCFSEAFYQDFHAGIEFSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...AAACTCTATCCCTGCATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
3UTR CAA 90 bp TTCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGG +
Preference number: 2 (lower is better)
Translates to: FSLPVASWKPCFRFR*ARILSFHLNPLFDG
Trigger: CCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565019.6
3UTR-3UTR TCA 90 bp CATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: HHKYVTVAHSQLRWQHLPFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp ACCTCCATTCCCAACAGAACCCTCATTCTGGTCTCGAACCTGACCTGTTTCTCGAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: TSIPNRTLILVSNLTCFSKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...CGAGAAACAGGTCAGGTTCGAGACCAGAATGAGGGTTCTGTTGGGAATGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR TCA 90 bp GGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGCAGAAGTACAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 2 (lower is better)
Translates to: GRCLISDHVYHCPELQKYKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...GTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000567723.5
ENST00000570075.5
3UTR-3UTR TCA 90 bp ATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACGTCTCCACAGGAATGTaGAGCGGTGGTCTTTATGTC +
Preference number: 2 (lower is better)
Translates to: ITFWLLIQLLQQILISYHVSTGM*SGGLYV
Trigger: GACATAAAGACCACCGCTTCACATTCCTGTGGAGAC...GTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR CAA 90 bp GTAGCATCTTGGAAACCATGCTTTAGATTCAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTC +
Preference number: 2 (lower is better)
Translates to: VASWKPCFRFRLARI*SFHLNPLFDGLSDL
Trigger: GAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR CAA 90 bp GCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCACTGTTGAAATGGGTTGTGGCATAC +
Preference number: 2 (lower is better)
Translates to: AGVKSSRLVDNCCST*TSTAGSLLKWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR TCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTTATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 2 (lower is better)
Translates to: FRLARILSFHLNPLFDGLYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp GCCTCTGAAAATCTCTTTGAATTTCTAGCCCTGTTGGTCAGAACCACCTCCATTAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 2 (lower is better)
Translates to: ASENLFEFLALLVRTTSIKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...AATGGAGGTGGTTCTGACCAACAGGGCTAGAAATTCAAAGAGATTTTCAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR TCA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 2 (lower is better)
Translates to: SILLSTLALTFDAELSPVKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
3UTR-3UTR TCA 90 bp GGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: GKPPAWSAVGFCAEDHHKASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...CTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR TCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: FRLARILSFHLNPLFDGLIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR GCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTTTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTA +
Preference number: 2 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTFPAKP*KLPRSL
Trigger: TAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CCA 90 bp TGGAAACCATGCTTTAGATTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: WKPCFRFRLARILSFHLNQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...ATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CCA 90 bp GGGAAGGGAATAAAAAGTCCTTTGTTTGAGTCCATTTCAATCCTGCTGTCAACATCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 2 (lower is better)
Translates to: GKGIKSPLFESISILLSTSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...TGTTGACAGCAGGATTGAAATGGACTCAAACAAAGGACTTTTTATTCCCTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561821.1
3UTR-3UTR CCA 90 bp CATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGAAAGCCTTCCAGTGCTaGAGTCAGGGTTTGACAGAG +
Preference number: 2 (lower is better)
Translates to: HLNPLFDGLSDLLVKIFLKAFQC*SQGLTE
Trigger: CTCTGTCAAACCCTGACTCCAGCACTGGAAGGCTTT...CAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR TCA 90 bp ATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTATATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 2 (lower is better)
Translates to: ILSFHLNPLFDGLSDLLVYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...TACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR TCA 90 bp TGGAAACCATGCTTTAGATTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 2 (lower is better)
Translates to: WKPCFRFRLARILSFHLNRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...ATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR GCA 90 bp TTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGTGTGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 2 (lower is better)
Translates to: LNPLFDGLSDLLVKIFLCDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...ACACAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR TCA 90 bp TACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: YHCPELQKYLGNPLFPGWKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...CCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
3UTR-3UTR GCA 90 bp TTTTGTGCAGAAGATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGAGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 2 (lower is better)
Translates to: FCAEDHHKYVTVAHSQLRDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...TCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CCA 90 bp ATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: ITFWLLIQLLQQILISYHALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...GTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR CAA 90 bp AAACCATGCTTTAGATTCAGGTTGGCAAGGATATTGTCCTTCCATTaGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATC +
Preference number: 2 (lower is better)
Translates to: KPCFRFRLARILSFH*NPLFDGLSDLLVKI
Trigger: GATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR CAA 90 bp GTAGATAATTGTTGCTCTACATTGACAAGTACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATACAGATCTGAACTAAGCTTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: VDNCCSTLTSTAGSL*KWVVAYRSELSFKS
Trigger: GCTTTTGAAGCTTAGTTCAGATCTGTATGCCACAACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR TCA 90 bp AAAGAGCCTATAATCTGTATCTTTCCTTACAACAGGATTAAGTCTCAAATCCAGATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 2 (lower is better)
Translates to: KEPIICIFPYNRIKSQIQISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...CTGGATTTGAGACTTAATCCTGTTGTAAGGAAAGATACAGATTATAGGCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570075.5
3UTR-3UTR TCA 90 bp CATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGTTCTGGAGAAGAACCTaGAGACTTATTGTCCAAAAA +
Preference number: 2 (lower is better)
Translates to: HLNPLFDGLSDLLVKIFLFWRRT*RLIVQK
Trigger: TTTTTGGACAATAAGTCTTCAGGTTCTTCTCCAGAA...CAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR GCA 90 bp CATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGACTCTGACCAGTTTTTaGTTCAAACTTTCCGAGAAA +
Preference number: 2 (lower is better)
Translates to: HLNPLFDGLSDLLVKIFLTLTSF*FKLSEK
Trigger: TTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...CAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR GCA 90 bp CATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGCTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 2 (lower is better)
Translates to: HLNPLFDGLSDLLVKIFLLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...CAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR CAA 90 bp AGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 3 (lower is better)
Translates to: SWASSWFRQATCMVSCWFPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp CCCTTCTCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: PFSSHLLWGSDCGLTRRVVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...TACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CAA 90 bp ATGCTTTCATCGTGTCTTCAGGATGTGAGCAACACCTCGGCTGAGAAGGAGCCGGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: MLSSCLQDVSNTSAEKEPVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...CGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565019.6
3UTR-3UTR CAA 90 bp TTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTACCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 3 (lower is better)
Translates to: FHASSISQALGQHPRRSVPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...TACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR GCA 72 bp TTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGGAGCTGTCTGAGGACA +
Preference number: 3 (lower is better)
Translates to: FLLRRREPEPFQ*LSTSSRSCLRT
Trigger: TGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CCA 72 bp ACTGTCTTCTCCAGCTTTTTCAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: TVFSSFFSWASS*FRQATCMVSCW
Trigger: CCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGAGAAGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CCA 72 bp AATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTaGTGTGAGTTCCATGCTAGCTCTATAAGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: NGGESLCGPGKL*CEFHASSISQA
Trigger: AGCCTGGCTTATAGAGCTAGCATGGAACTCACACCACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
3UTR-3UTR CAA 90 bp CATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTACCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 3 (lower is better)
Translates to: HASSISQALGQHPRRSVLPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...TAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp CCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCACCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 3 (lower is better)
Translates to: PSQEAGALSRNNLLAPYSPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...TGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR TCA 72 bp GAAGCAAATCTCGGGCAGGACCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTAT +
Preference number: 3 (lower is better)
Translates to: EANLGQDRETSC*GGGSRSHSSAY
Trigger: ATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCCTGCCCGAGATTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR CCA 72 bp TGGAGAATGGCAACTGTCTTCTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATG +
Preference number: 3 (lower is better)
Translates to: WRMATVFSSFFS*ASSWFRQATCM
Trigger: CATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGAGAAGACAGTTGCCATTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp AGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 3 (lower is better)
Translates to: SQALGQHPRRSVLDTDQSVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...AGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR TCA 72 bp TCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTaGCCAGTCTCATGTGCCACTGGTGAGGAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: SGAASKTLCIRY*PVSCATGEEED
Trigger: GTCTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR GCA 72 bp TTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCA +
Preference number: 3 (lower is better)
Translates to: FSWASSWFRQAT*MVSCWFLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CCA 72 bp GCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCAT +
Preference number: 3 (lower is better)
Translates to: AGQAPGSGKPPA*SAVGFCAEDHH
Trigger: ATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp CAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 3 (lower is better)
Translates to: QERFPGITFWLLIQLLQQFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...CTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp CCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACATCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: PFQCLSTSSRSCLRTVATSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...TGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp GTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: VYHCPELQKYLGNPLFPGVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR CAA 90 bp GGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCTGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 3 (lower is better)
Translates to: GAIPVLIHKLQELSEDSGCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...GCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR TCA 72 bp TTCATCGTGTCTTCAGGATGTGAGCAACACCTCGGCTaGGAAGGAGCCGGGACTACCAAAGACAGAAGCAAA +
Preference number: 3 (lower is better)
Translates to: FIVSSGCEQHLG*EGAGTTKDRSK
Trigger: TTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR-3UTR CAA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 3 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp TCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 3 (lower is better)
Translates to: SSHLLWGSDCGLTRRVVSYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...AGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000567723.5
3UTR-3UTR CAA 90 bp AGATACTTGGTACCCTTCTCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGTTGGCATCTCCCTTCTaGCTACTTCCTGTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: RYLVPFSSHLLWGSDCGLLASPF*LLPVSV
Trigger: CACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAA...CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAAGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561821.1
3UTR-3UTR CAA 90 bp GGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGATCTCACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 3 (lower is better)
Translates to: GSLFSCCSRYSLVTTRDLTAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...GAGATCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR CCA 72 bp AAAAGATACTTGGTACCCTTCTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTGACGAGGCGAGTAGTG +
Preference number: 3 (lower is better)
Translates to: KRYLVPFSSHLL*GSDCGLTRRVV
Trigger: CACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAAGTATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567723.5
ENST00000569552.5
3UTR-3UTR CAA 90 bp GATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 3 (lower is better)
Translates to: DHHKYVTVAHSQLRWQHLPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...AAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp TCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 3 (lower is better)
Translates to: SSHLLWGSDCGLTRRVVSRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...AGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR TCA 72 bp CCATTCCCAACAGAACCCTCATTCTGGTCTCGAACCTaGCCTGTTTCTCGCACAAACACAAACAAGCCAACA +
Preference number: 3 (lower is better)
Translates to: PFPTEPSFWSRT*PVSRTNTNKPT
Trigger: TGTTGGCTTGTTTGTGTTTGTGCGAGAAACAGGTCAGGTTCGAGACCAGAATGAGGGTTCTGTTGGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR GCA 72 bp ACCTGTTTCTCGCACAAACACAAACAAGCCAACACTTaGCTCGCTGCCTGTAGCATCTTGGAAACCATGCTT +
Preference number: 3 (lower is better)
Translates to: TCFSHKHKQANT*LAACSILETML
Trigger: AAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGTGTTTGTGCGAGAAACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR CCA 72 bp GCAAACTACCCAGGTCACTCGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTCAGGTTGGCAAGGATA +
Preference number: 3 (lower is better)
Translates to: ANYPGHSLPVAS*KPCFRFRLARI
Trigger: TATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGTGACCTGGGTAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568010.5
3UTR CCA 72 bp AGGTCACTAGAGAGAGGCTCGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTCAGGTTGGCAAGGATA +
Preference number: 3 (lower is better)
Translates to: RSLERGSLPVAS*KPCFRFRLARI
Trigger: TATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGCCTCTCTCTAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CAA 90 bp GGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCAGCTTTTTCAGCTTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 3 (lower is better)
Translates to: GISDFHGEWQLSSPAFSAFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...AGCTGAAAAAGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp TTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGTGTGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: LNPLFDGLSDLLVKIFLCVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...ACACAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTTTTCCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 3 (lower is better)
Translates to: FRLARILSFHLNPLFDGLFPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGAAA...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp TTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCATGTCATTAGGGACTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 3 (lower is better)
Translates to: FLQHSDQFLLQTFHVIRDFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...GTCCCTAATGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565019.6
3UTR-3UTR CAA 90 bp GCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 3 (lower is better)
Translates to: ALSRNNLLAPYSAAAADTRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...AGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
3UTR-3UTR CAA 90 bp AGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGCACTCTGACCAGTTTTaGCTTCAAACTTTCCGAGAA +
Preference number: 3 (lower is better)
Translates to: RRSVLDTDQSHVPLVRRKHSDQF*LQTFRE
Trigger: TTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...CTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
3UTR CCA 72 bp AACAAGCCAACACTTGCCTCGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTCAGGTTGGCAAGGATA +
Preference number: 3 (lower is better)
Translates to: NKPTLASLPVAS*KPCFRFRLARI
Trigger: TATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR CAA 90 bp TCTGAAAATCTCTTTGAATTTCTAGCCCTGTTGGTCAGAACCACCTCCATTCCCTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 3 (lower is better)
Translates to: SENLFEFLALLVRTTSIPYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...GGGAATGGAGGTGGTTCTGACCAACAGGGCTAGAAATTCAAAGAGATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR-3UTR CAA 90 bp AGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGCTTTATGCTATACTCTaGATAGTTCTTGCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: RRSVLDTDQSHVPLVRRKLYAIL*IVLASL
Trigger: CAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG...CTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR GCA 72 bp GTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTA +
Preference number: 3 (lower is better)
Translates to: VGRCLISDHVYH*PELQKYLGNPL
Trigger: TAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
3UTR GCA 72 bp GCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTaGTCTACATTGACAAGTACAGCAGGGTCACTGTTG +
Preference number: 3 (lower is better)
Translates to: AGVKSSRLVDNC*STLTSTAGSLL
Trigger: CAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR CAA 90 bp ATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTATACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 3 (lower is better)
Translates to: ILSFHLNPLFDGLSDLLVYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...TACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR-3UTR CAA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTTGCTGGAGTCAGGGTTaGACAGAGAAGTTAATAAGT +
Preference number: 3 (lower is better)
Translates to: FRLARILSFHLNPLFDGLCWSQG*TEKLIS
Trigger: ACTTATTAACTTCTCTGTCAAACCCTGACTCCAGCA...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR-3UTR CAA 90 bp GGGAAGGGAATAAAAAGTCCTTTGTTTGAGTCCATTTCAATCCTGCTGTCAACACTCAAATCCAGTTCTTaGAGGAAGGGTAACGGTTGT +
Preference number: 3 (lower is better)
Translates to: GKGIKSPLFESISILLSTLKSSS*RKGNGC
Trigger: ACAACCGTTACCCTTCCTCAAAGAACTGGATTTGAG...TGTTGACAGCAGGATTGAAATGGACTCAAACAAAGGACTTTTTATTCCCTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570075.5
3UTR-3UTR CAA 90 bp TGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTCTACATTGACAAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 3 (lower is better)
Translates to: CAGVKSSRLVDNCCSTLTRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...TGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
3UTR TCA 72 bp CATTTCAATCCTGCTGTCAACATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGTTACACAGTTTTTCAT +
Preference number: 3 (lower is better)
Translates to: HFNPAVNISTDF*CRALTCYTVFH
Trigger: ATGAAAAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570075.5
3UTR CCA 72 bp GAGAAGTTAATAAGTCTCCACAGGAATGTGAAGCGGTaGTCTTTATGTCATTTGAAGGCTTTATGCTATACT +
Preference number: 3 (lower is better)
Translates to: EKLISLHRNVKR*SLCHLKALCYT
Trigger: AGTATAGCATAAAGCCTTCAAATGACATAAAGACCACCGCTTCACATTCCTGTGGAGACTTATTAACTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
3UTR TCA 72 bp TCCAGGCATTTACTCAATGAGGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGTATCAATTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SRHLLNEASWVR*KVSGFGINSFS
Trigger: AGAAAAGGAATTGATACCAAAACCTGATACTTTTCATCTTACCCATGATGCCTCATTGAGTAAATGCCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR GCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGATCGTCCAGCTCCCATTaGTCCGCCATCCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGSSSSH*SAIPAR
Trigger: GCGGGCGGGGATGGCGGAGCAATGGGAGCTGGACGA...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329956.11
CDS-3UTR TCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTGAGCAACACCTCGGCTaGGAAGGAGCCGGGACTACC +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCEQHLG*EGAGTT
Trigger: GGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTC...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR TCA 90 bp ATTAGGGACCAGCTGCGCAGCCTCCTTCAGTTCAAGCTCCCTCCTGCAGAATGCGAGCAACACCTCGGCTaGGAAGGAGCCGGGACTACC +
Preference number: 4 (lower is better)
Translates to: IRDQLRSLLQFKLPPAECEQHLG*EGAGTT
Trigger: GGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTC...GCATTCTGCAGGAGGGAGCTTGAACTGAAGGAGGCTGCGCAGCTGGTCCCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp ATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACATGGAACCTGTCTCCGGCTaGTCCAGCGTCAGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: IPVLIHKLQELSEDSGHMEPVSG*SSVSAP
Trigger: GGGGGCGCTGACGCTGGAGCAGCCGGAGACAGGTTC...CATGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR GCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATCCACCAGTTCCGGCTaGTCCAGCGTCAGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGSTSSG*SSVSAP
Trigger: GGGGGCGCTGACGCTGGAGCAGCCGGAACTGGTGGA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329956.11
CDS-3UTR CCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTCTGGGGATCGGACTGTaGACTGACGAGGCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCLGIGL*TDEASS
Trigger: ACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAG...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
ENST00000567823.5
CDS-3UTR TCA 90 bp CTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LVEEEGAGAIPVLIHKLQRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...CTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp TTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRRREPEPFQCLSTSSRSPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...GCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTCCAGGAGGTAGAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: EFHASSISQALGQHPRRSPGGRG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTCTACCTCCTGG...AGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGACTGGGGATCGGACTGTaGACTGACGAGGCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGLGIGL*TDEASS
Trigger: ACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAG...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CCA 90 bp CTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LLVEEEGAGAIPVLIHKLSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...GAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: EFHASSISQALGQHPRRSSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...AGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTTGCCCACTCACAATTaGGATGGCAGCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLLPTHN*DGSTFL
Trigger: GAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR TCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR TCA 90 bp GGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGGGCAGGAGAACTGCTTaGACCCAGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GDNSSVRRGVVLFPRTALGRRTA*TQEVEV
Trigger: AACCTCTACCTCCTGGGTTCAAGCAGTTCTCCTGCC...CAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR TCA 90 bp GGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCTTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: GAIPVLIHKLQELSEDSGFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...GCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGATCTCTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GSLFSCCSRYSLVTTRDLWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...GAGATCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp GTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VEEEGAGAIPVLIHKLQEFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...CTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CCA 90 bp AGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTGAACTGGGGATCGGACTGTaGACTGACGAGGCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SHLLWGSDCGLTRRVVSELGIGL*TDEASS
Trigger: ACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAG...TTCAGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567723.5
ENST00000569552.5
CDS-3UTR CCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CCA 90 bp TTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: FSWASSWFRQATCMVSCWGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...CCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAGCAACCTCCACCTCCTaGGTTCAAGTGAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRATSTS*VQVSLL
Trigger: CAGGAGACTCACTTGAACCCAGGAGGTGGAGGTTGC...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
3UTR CAA 72 bp AAGTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KSQETTAVSAEE*SCFPGQRCLGQ
Trigger: CTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGTCTCCACAGGAATGTaGAGCGGTGGTCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGVSTGM*SGGLYV
Trigger: GACATAAAGACCACCGCTTCACATTCCTGTGGAGAC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp GGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: GDNSSVRRGVVLFPRTALTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...CAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: GAIPVLIHKLQELSEDSGTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...GCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: WASSWFRQATCMVSCWFLFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...CAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTCCCCCAGGCGGCGAATaGCTTCCTCGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SILLSTLALTFDAELSPVPPGGE*LPRPAP
Trigger: GGGAGCTGGACGAGGAAGGCATTCGCCGCCTGGGGG...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR GCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLFPAKP*KLPRSL
Trigger: TAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp TTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTACCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHASSISQALGQHPRRSVPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...TACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGGTTCAAGCTCCCTCCTaGAGAATGCTTTCATCGTGT +
Preference number: 4 (lower is better)
Translates to: VEEEGAGAIPVLIHKLQEVQAPS*RMLSSC
Trigger: ACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAAC...CTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp CTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LVEEEGAGAIPVLIHKLQRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...CTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp ATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTACAACTGGATTCCCCGGCTaGTCCAGCGTCAGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: ILLSTLALTFDAELSPVTTGFPG*SSVSAP
Trigger: GGGGGCGCTGACGCTGGAGCAGCCGGGGAATCCAGT...TGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR CCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGCTGGTGATTGTCACTTaGCATCTCCCTTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLLVIVT*HLPSCY
Trigger: GTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAG...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR CCA 90 bp GGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GAIPVLIHKLQELSEDSGGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...GCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp GCTGCGCAGCCTCCTTCAGTTCAAGCTCCCTCCTGCAGAATGCTTTCATCGTGTTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AAQPPSVQAPSCRMLSSCSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...ACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAACTGAAGGAGGCTGCGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CCA 90 bp AACACCTCGGCTGAGAAGGAGCCGGGACTACCAAAGACAGAAGCAAATCTCGGGTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NTSAEKEPGLPKTEANLGSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...CCCGAGATTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR CAA 72 bp AGAAGCAAATCTCGGGCAGGACCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: RSKSRAGPRNFL*RRREPEPFQCL
Trigger: TAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCCTGCCCGAGATTTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR TCA 90 bp GCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: ASSWFRQATCMVSCWFLCRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...GCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTCAGGCATTTACTCAATaGGGCATCATGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCQAFTQ*GIMGKM
Trigger: CATCTTACCCATGATGCCTCATTGAGTAAATGCCTG...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGGTCTCCACAGGAATGTaGAGCGGTGGTCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: WASSWFRQATCMVSCWFLVSTGM*SGGLYV
Trigger: GACATAAAGACCACCGCTTCACATTCCTGTGGAGAC...CAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR TCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp AGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RRSVLDTDQSHVPLVRRKRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...CTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGAGAGCAACACCTCGGCTaGGAAGGAGCCGGGACTACC +
Preference number: 4 (lower is better)
Translates to: FWLLIQLLQQILISYHQGEQHLG*EGAGTT
Trigger: GGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTC...TCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp CTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: LLVEEEGAGAIPVLIHKLTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...GAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: FHASSISQALGQHPRRSVFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...TACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp CATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: HHKYVTVAHSQLRWQHLPWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR TCA 90 bp TCCCCAGTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGGCAGCAGTGGGGGAATaGCTTTCCCAAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPVGRCLISDHVYHCPELAAVGE*LSQGQK
Trigger: CTTCTGCCCTTGGGAAAGTCATTCCCCCACTGCTGC...CAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCACTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR GCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGCCCCCAGGCGGCGAATaGCTTCCTCGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRPPGGE*LPRPAP
Trigger: GGGAGCTGGACGAGGAAGGCATTCGCCGCCTGGGGG...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329956.11
CDS-3UTR GCA 90 bp GAAGTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: EVPGDNSSVRRGVVLFPRDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...CCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp CTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LVEEEGAGAIPVLIHKLQDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...CTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGATTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGFPAKP*KLPRSL
Trigger: TAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGTTCAAGCTCCCTCCTaGAGAATGCTTTCATCGTGT +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGVQAPS*RMLSSC
Trigger: ACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAAC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CCA 90 bp CTTCCTGGTGATTGTCACTTGGCATCTCCCTTCTTGCTACTTCCTGTGTCTGTGCTGGGGATCGGACTGTaGACTGACGAGGCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LPGDCHLASPFLLLPVSVLGIGL*TDEASS
Trigger: ACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAG...CACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR CCA 90 bp GTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTCCAACTGTGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VCDCCPLTIEMAAPSSNCGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...ACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TCCCCAGTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SPVGRCLISDHVYHCPELRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...CAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCACTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CCA 90 bp GACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DPSQEAGALSRNNLLAPYSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...ATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CAA 72 bp CATCTTCCTGGTGATTGTCACTTGGCATCTCCCTTCTaGCTACTTCCTGTGTCTGTGTCCCCAGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HLPGDCHLASPF*LLPVSVSPVGR
Trigger: CCTTCCCACTGGGGACACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR TCA 90 bp ATTAGGGACCAGCTGCGCAGCCTCCTTCAGTTCAAGCTCCCTCCTGCAGAATGCATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: IRDQLRSLLQFKLPPAECISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...GCATTCTGCAGGAGGGAGCTTGAACTGAAGGAGGCTGCGCAGCTGGTCCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp GGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAACCATGTGCTGGTCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: GVVLFPRTALFGTEPCAGRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...ACCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGNLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp GTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACATATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: VPGDNSSVRRGVVLFPRTYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...TGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp AGTTTTTGCTTCAAACTTTCCATGTCATTAGGGACCAGCTGCGCAGCCTCCTTCCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SFCFKLSMSLGTSCAASFRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...GAAGGAGGCTGCGCAGCTGGTCCCTAATGACATGGAAAGTTTGAAGCAAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp TCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTTTGCCCACTCACAATTaGGATGGCAGCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SQEAGALSRNNLLAPYSALPTHN*DGSTFL
Trigger: GAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAA...AGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCATTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: PSQEAGALSRNNLLAPYSFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...TGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTCAATGGAATGGATTTTaGCAGCATAAGATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TTILVAMAVRASVDQGSCQWNGF*QHKIPA
Trigger: TGCAGGGATCTTATGCTGGCAAAATCCATTCCATTG...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000565019.6
CDS-3UTR GCA 90 bp CTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLVEEEGAGAIPVLIHKLDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...GAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALSRNNLLAPYSAAAADTPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...AGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCATTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AGALSRNNLLAPYSAAAAFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...TGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp AGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTGAATTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SHLLWGSDCGLTRRVVSEFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...TTCAGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR GCA 90 bp GATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTTTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: DDDPSQEAGALSRNNLLAFPAKP*KLPRSL
Trigger: GAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...AGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568010.5
CDS-3UTR CCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGCACTCACAATTGAGATaGCAGCACCTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: WASSWFRQATCMVSCWFLHSQLR*QHLPPT
Trigger: AGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTG...CAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGATACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp GCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: ASSWFRQATCMVSCWFLCKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...GCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp AGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACACAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: RNFLLRRREPEPFQCLSTQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...TGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGGAGCAACACCTCGGCTaGGAAGGAGCCGGGACTACC +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWREQHLG*EGAGTT
Trigger: GGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTTGCTC...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR TCA 90 bp GAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: EFHASSISQALGQHPRRSFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...AGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGTTGCCCACTCACAATTaGGATGGCAGCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QHPRRSVLDTDQSHVPLVLPTHN*DGSTFL
Trigger: GAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAA...CACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGATCATCATAAGTATGTaGCTGTTGCCCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: FSWASSWFRQATCMVSCWIIISM*LLPTHN
Trigger: ATTGTGAGTGGGCAACAGTCACATACTTATGATGAT...CCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGAACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTTGGTGGCAATGGCGGTaGGAGCCTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTWWQWR*EPLWTR
Trigger: CCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCA...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp TGGTGTGAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGAGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: WCEFHASSISQALGQHPRDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...TCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp TTGGTACCCTTCTCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGTCAAAAGCCTTCCAGTaGTGGAGTCAGGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LVPFSSHLLWGSDCGLTRSKAFQ*WSQGLT
Trigger: TGTCAAACCCTGACTCCAGCACTGGAAGGCTTTTGA...CCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR GCA 90 bp TTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTAGTTCAAGCTCCCTCCTaGAGAATGCTTTCATCGTGT +
Preference number: 4 (lower is better)
Translates to: FHASSISQALGQHPRRSVVQAPS*RMLSSC
Trigger: ACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAAC...TACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp CTTTCCATGTCATTAGGGACCAGCTGCGCAGCCTCCTTCAGTTCAAGCTCCCTCGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 4 (lower is better)
Translates to: LSMSLGTSCAASFSSSSLGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...GAGGGAGCTTGAACTGAAGGAGGCTGCGCAGCTGGTCCCTAATGACATGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp AGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: RNFLLRRREPEPFQCLSTRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...TGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCATCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: PSQEAGALSRNNLLAPYSSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...TGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CCA 90 bp GACTGTGGACTGACGAGGCGAGTAGTGTCTGAACTCCATTTCAATCCTGCTGTCTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: DCGLTRRVVSELHFNPAVSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...GACAGCAGGATTGAAATGGAGTTCAGACACTACTCGCCTCGTCAGTCCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569552.5
CDS-3UTR CCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGAGGAATGTGAAGCGGTaGTCTTTATGTCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLRNVKR*SLCHLK
Trigger: CTTCAAATGACATAAAGACCACCGCTTCACATTCCT...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGAAAAGCCTTCCAGTGCTaGAGTCAGGGTTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGKAFQC*SQGLTE
Trigger: CTCTGTCAAACCCTGACTCCAGCACTGGAAGGCTTT...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAGGGTCACTGTTGAAATaGGTTGTGGCATACAGATCT +
Preference number: 4 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRGSLLK*VVAYRS
Trigger: AGATCTGTATGCCACAACCCATTTCAACAGTGACCC...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ERFPGITFWLLIQLLQQIQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...TATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp ACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTCCAACTGTTGAATTTGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TVAHSQLRWQHLPPTVEFGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...AAATTCAACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp ACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTCCAACTGTTGAATTTAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: TVAHSQLRWQHLPPTVEFRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...AAATTCAACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGESWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CCGAGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRNFLLRRREPEPFQCLSDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...GGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTGGTACCCTTCTCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LVPFSSHLLWGSDCGLTRYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...CCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567723.5
ENST00000569552.5
CDS-3UTR CCA 90 bp AGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SQALGQHPRRSVLDTDQSYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...AGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTAATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: FHASSISQALGQHPRRSVISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...TACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAACCATGTGCTGGTATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: GVVLFPRTALFGTEPCAGISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...ACCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp CGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: RFPGITFWLLIQLLQQILRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...GAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: SSHLLWGSDCGLTRRVVSKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...AGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000567723.5
CDS-3UTR TCA 90 bp AGGCGAGTAGTGTCTGAACTCATCTTCCTGGTGATTGTCACTTGGCATCTCCCTGAGGCGAGTAGTGTCTaGACTCATCTTCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RRVVSELIFLVIVTWHLPEASSV*THLPGD
Trigger: ATCACCAGGAAGATGAGTTCAGACACTACTCGCCTC...AGGGAGATGCCAAGTGACAATCACCAGGAAGATGAGTTCAGACACTACTCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR TCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp GAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: ERFPGITFWLLIQLLQQIQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...TATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QERFPGITFWLLIQLLQQIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...CTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTTTCCCAAAGGGCGATGATCTCCCCAGATGATGACCCTTCTCAGGAGGCAGGATATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: FSQRAMISPDDDPSQEAGYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...TCCTGCCTCCTGAGAAGGGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCGTGTCTTCAGGATGTaGGCAACACCTCGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESRVFRM*ATPRLR
Trigger: TCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACG...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR TCA 90 bp TTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGACGTGTCTTCAGGATGTaGGCAACACCTCGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FWLLIQLLQQILISYHQGRVFRM*ATPRLR
Trigger: TCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACG...TCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp GACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: DPSQEAGALSRNNLLAPYFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...ATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp AGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: RRSVLDTDQSHVPLVRRKTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...CTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAACTCTTGATAGTTCTTaGTTCTCTGAGGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGTLDSS*FSEAFY
Trigger: GTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGT...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGFPAKP*KLPRSL
Trigger: TAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp GGGACAGAACCATGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTEPCAGVKSSRLVDNCCPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...GCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTCTCCCTCCTGCAGAATaGTTTCATCGTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCLPPAE*FHRVFR
Trigger: CCTGAAGACACGATGAAAGCATTCTGCAGGAGGGAG...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR GCA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGACTCTGACCAGTTTTTaGTTCAAACTTTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLTLTSF*FKLSMS
Trigger: TGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp ATGCTTTCATCGTGTCTTCAGGATGTGAGCAACACCTCGGCTGAGAAGGAGCCGGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 4 (lower is better)
Translates to: MLSSCLQDVSNTSAEKEPGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...CGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp GACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 4 (lower is better)
Translates to: DPSQEAGALSRNNLLAPYGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...ATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGATCTCAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: GSLFSCCSRYSLVTTRDLRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...GAGATCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: ALSRNNLLAPYSAAAADTRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...AGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACTGGTGATTGTCACTTaGCATCTCCCTTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGLVIVT*HLPSCY
Trigger: GTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAG...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR CCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGCTGGGGATCGGACTGTaGACTGACGAGGCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGELGIGL*TDEASS
Trigger: ACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAG...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp AGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCCATGCAGGGATAGAGTTTCTGGGGATCGGACTGTaGACTGACGAGGCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSCFSEAFYQDFHAGIEFLGIGL*TDEASS
Trigger: ACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAG...AAACTCTATCCCTGCATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR CCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGGAATGTGAAGCGGTaGTCTTTATGTCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGRNVKR*SLCHLK
Trigger: CTTCAAATGACATAAAGACCACCGCTTCACATTCCT...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp CGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAACCATGTGGGTCACTGTTGAAATaGGTTGTGGCATACAGATCT +
Preference number: 4 (lower is better)
Translates to: RRGVVLFPRTALFGTEPCGSLLK*VVAYRS
Trigger: AGATCTGTATGCCACAACCCATTTCAACAGTGACCC...ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WASSWFRQATCMVSCWFLALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...CAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTGGGTTCTGGCAGAGATaGGGGGACTGTGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DHHKYVTVAHSQLRWQHLGFWQR*GDCGFQ
Trigger: CTGGAAACCACAGTCCCCCCATCTCTGCCAGAACCC...AAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp AACACCTCGGCTGAGAAGGAGCCGGGACTACCAAAGACAGAAGCAAATCTCGGGTGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: NTSAEKEPGLPKTEANLGCMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...CCCGAGATTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGAGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp ATGCTTTCATCGTGTCTTCAGGATGTGAGCAACACCTCGGCTGAGAAGGAGCCGGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MLSSCLQDVSNTSAEKEPDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...CGGCTCCTTCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACGATGAAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
3UTR CAA 72 bp GCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTGGTGTTAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: AEELSCFPGQRC*GQNHVLVLNHP
Trigger: TGGATGATTTAACACCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGAATAAGATCCCTGCAATaGAAGAGACTCCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGIRSLQ*KRLHQF
Trigger: GAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTAT...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000565019.6
CDS-3UTR TCA 90 bp GACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAAATCCAGTTCTTTaGGGAAGGGTAACGGTTGTA +
Preference number: 4 (lower is better)
Translates to: DPSQEAGALSRNNLLAPYSNPVL*GRVTVV
Trigger: TACAACCGTTACCCTTCCTCAAAGAACTGGATTTGA...ATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR TCA 90 bp GTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPGDNSSVRRGVVLFPRTKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...TGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000568010.5
CDS-3UTR TCA 90 bp AGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACACAGGCATTTACTCAATaGGGCATCATGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: RNFLLRRREPEPFQCLSTQAFTQ*GIMGKM
Trigger: CATCTTACCCATGATGCCTCATTGAGTAAATGCCTG...TGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGAATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: SQEAGALSRNNLLAPYSANLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...AGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTGTTGCCCACCGAGAAACTTCTTGTTaGGGAGGAGGGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SAVGFCAEDHHKYVTVAHRETSC*GGGSRS
Trigger: GCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCG...GTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TGGCTAGAATCACCCACATCCAGGCATTTACTCAATGAGGCATCATGGGTAAGATTGCCCACTCACAATTaGGATGGCAGCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: WLESPTSRHLLNEASWVRLPTHN*DGSTFL
Trigger: GAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAA...TCTTACCCATGATGCCTCATTGAGTAAATGCCTGGATGTGGGTGATTCTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR GCA 90 bp AAAGAGCCTATAATCTGTATCTTTCCTTACAACAGGATTAAGTCTCAAATCCAGTCGTCCAGCTCCCATTaGTCCGCCATCCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: KEPIICIFPYNRIKSQIQSSSSH*SAIPAR
Trigger: GCGGGCGGGGATGGCGGAGCAATGGGAGCTGGACGA...CTGGATTTGAGACTTAATCCTGTTGTAAGGAAAGATACAGATTATAGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR GCA 90 bp TTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTACAATGGAATGGATTTTaGCAGCATAAGATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FHASSISQALGQHPRRSVQWNGF*QHKIPA
Trigger: TGCAGGGATCTTATGCTGGCAAAATCCATTCCATTG...TACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR GCA 90 bp AGGCGAGTAGTGTCTGAACTCATCTTCCTGGTGATTGTCACTTGGCATCTCCCTGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RRVVSELIFLVIVTWHLPDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...AGGGAGATGCCAAGTGACAATCACCAGGAAGATGAGTTCAGACACTACTCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR GCA 90 bp TCCCCAGTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SPVGRCLISDHVYHCPELDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...CAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000567723.5
ENST00000570075.5
CDS-3UTR GCA 90 bp AGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGTTTCCAGCCAAACCGTaGAAACTACCCAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: RRSVLDTDQSHVPLVRRKFPAKP*KLPRSL
Trigger: TAGTGACCTGGGTAGTTTGCACGGTTTGGCTGGAAA...CTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000567823.5
CDS-3UTR GCA 90 bp GAAGTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGCCCAGCCTGAAGCAATaGTTTTATAAGAACTATTTC +
Preference number: 4 (lower is better)
Translates to: EVPGDNSSVRRGVVLFPRPSLKQ*FYKNYF
Trigger: GAAATAGTTCTTATAAAAGCATTGCTTCAGGCTGGG...CCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR GCA 90 bp CTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGACTCTGACCAGTTTTTaGTTCAAACTTTCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: LVEEEGAGAIPVLIHKLQTLTSF*FKLSEK
Trigger: TTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...CTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGTGAACATAAATACTaGATTCCCTTAAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: VHTTILVAMAVRASVDQGSEHKY*IPLRLV
Trigger: CACTAGCCTTAAGGGAATCCAGTATTTATGTTCACT...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000565019.6
CDS-3UTR CCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCAAAGCCTTCCAGTGCTaGAGTCAGGGTTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLKAFQC*SQGLTE
Trigger: CTCTGTCAAACCCTGACTCCAGCACTGGAAGGCTTT...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QERFPGITFWLLIQLLQQALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...CTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: DDDPSQEAGALSRNNLLALPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...AGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp ATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACAGGACAGTGGCCACATaGGGGGTTCTGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ITFWLLIQLLQQILISYHRTVAT*GVLAEM
Trigger: CATCTCTGCCAGAACCCCCCATGTGGCCACTGTCCT...GTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HHKYVTVAHSQLRWQHLPSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LVQASHLHGQLLVFVQKIDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...GATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTGGTACCCTTCTCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LVPFSSHLLWGSDCGLTRWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...CCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567723.5
ENST00000569552.5
3UTR CAA 72 bp CCAGTTTTTGCTTCAAACTTTCCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: PVFASNFPRNFL*RRREPEPFQCL
Trigger: TAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGAAAGTTTGAAGCAAAAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATAATAAGATCCCTGCAATaGAAGAGACTCCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: ERFPGITFWLLIQLLQQIIRSLQ*KRLHQF
Trigger: GAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTAT...TATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR TCA 90 bp TACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: YHCPELQKYLGNPLFPGWRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...CCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR TCA 90 bp GCTTGGCAGCTTTTCTCTCACCTTCACGTACAGTTCGGTCATCTAATTTCTCCACGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: AWQLFSHLHVQFGHLISPRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...TGGAGAAATTAGATGACCGAACTGTACGTGAAGGTGAGAGAAAAGCTGCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR TCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTCAGGCATTTACTCAATaGGGCATCATGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCQAFTQ*GIMGKM
Trigger: CATCTTACCCATGATGCCTCATTGAGTAAATGCCTG...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp GTTTCTCGCACAAACACAAACAAGCCAACACTTGCCTCGCTGCCTGTAGCATCTATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VSRTNTNKPTLASLPVASIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...AGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGTGTTTGTGCGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR TCA 90 bp CAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: QHPRRSVLDTDQSHVPLVNLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...CACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATAAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: ERFPGITFWLLIQLLQQINLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...TATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGTATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: QHPRRSVLDTDQSHVPLVYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...CACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp ATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCGTGTCTTCAGGATGTaGGCAACACCTCGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ITFWLLIQLLQQILISYHRVFRM*ATPRLR
Trigger: TCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACG...GTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR TCA 90 bp GTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VQASHLHGQLLVFVQKIIFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...GATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR GCA 90 bp AGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTGAAACTCTTGATAGTTCTTaGTTCTCTGAGGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SHLLWGSDCGLTRRVVSETLDSS*FSEAFY
Trigger: GTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGT...TTCAGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR GCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTCAAAAGCCTTCCAGTaGTGGAGTCAGGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLSKAFQ*WSQGLT
Trigger: TGTCAAACCCTGACTCCAGCACTGGAAGGCTTTTGA...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp GGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGCTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: GDNSSVRRGVVLFPRTALLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...CAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCCCTCCTGCAGAATaGTTTCATCGTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESLPPAE*FHRVFR
Trigger: CCTGAAGACACGATGAAAGCATTCTGCAGGAGGGAG...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR GCA 90 bp GAGAAGGAGCCGGGACTACCAAAGACAGAAGCAAATCTCGGGCAGGACCGAGAAACTCTGACCAGTTTTTaGTTCAAACTTTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: EKEPGLPKTEANLGQDRETLTSF*FKLSMS
Trigger: TGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...TTCTCGGTCCTGCCCGAGATTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CCA 90 bp ATCTTCCTGGTGATTGTCACTTGGCATCTCCCTTCTTGCTACTTCCTGTGTCTGCTGGTGATTGTCACTTaGCATCTCCCTTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: IFLVIVTWHLPSCYFLCLLVIVT*HLPSCY
Trigger: GTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAG...CAGACACAGGAAGTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp GGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGCAGAAGTACTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: GRCLISDHVYHCPELQKYSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...GTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000567723.5
CDS-3UTR CCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCCACTCACAATTGAGATaGCAGCACCTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLHSQLR*QHLPPT
Trigger: AGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTG...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp CTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LVQASHLHGQLLVFVQKIWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...GATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAGAACTATTTCATGTGTaGCCGAAGCAAATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRELFHV*PKQMCK
Trigger: TTTACACATTTGCTTCGGCCACACATGAAATAGTTC...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR TCA 90 bp TCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSHLLWGSDCGLTRRVVSKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...AGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR TCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGGAGGCGAGTAGTGTCTaGACTCATCTTCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEEASSV*THLPGD
Trigger: ATCACCAGGAAGATGAGTTCAGACACTACTCGCCTC...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR TCA 90 bp CTCATTAGTTACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: LISYHQGSLTFMENGNCLQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...AAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTAACTAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTCAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: FRLARILSFHLNPLFDGLQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCAGCTTTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: YHQGSLTFMENGNCLLQLFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...AAGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTTGCCCACTCACAATTaGGATGGCAGCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRLPTHN*DGSTFL
Trigger: GAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAA...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGAATCATCATAAGTATGTaGCTGTTGCCCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGIIISM*LLPTHN
Trigger: ATTGTGAGTGGGCAACAGTCACATACTTATGATGAT...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp CATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGCTGGTCTTGAACTCCTaGCCTGAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: HLNPLFDGLSDLLVKIFLLVLNS*PEVIHP
Trigger: TGGGTGGATCACCTCAGGTCAGGAGTTCAAGACCAG...CAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR GCA 90 bp GCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCCTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: ASSWFRQATCMVSCWFLCLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...GCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp GATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCTCCCTCCTGCAGAATaGTTTCATCGTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DHHKYVTVAHSQLRWQHLLPPAE*FHRVFR
Trigger: CCTGAAGACACGATGAAAGCATTCTGCAGGAGGGAG...AAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp CTCATTAGTTACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCCTCCTGCAGAATaGTTTCATCGTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LISYHQGSLTFMENGNCLLPPAE*FHRVFR
Trigger: CCTGAAGACACGATGAAAGCATTCTGCAGGAGGGAG...AAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTAACTAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR GCA 90 bp AACAGAACCCTCATTCTGGTCTCGAACCTGACCTGTTTCTCGCACAAACACAAAAGATGTAAGCCACCGTaGCTGGCCACTAGGATATTT +
Preference number: 4 (lower is better)
Translates to: NRTLILVSNLTCFSHKHKRCKPP*LATRIF
Trigger: AAATATCCTAGTGGCCAGGCACGGTGGCTTACATCT...TTTGTGTTTGTGCGAGAAACAGGTCAGGTTCGAGACCAGAATGAGGGTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR GCA 90 bp GATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTACTCTGACCAGTTTTTaGTTCAAACTTTCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: DDDPSQEAGALSRNNLLATLTSF*FKLSEK
Trigger: TTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...AGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: QHPRRSVLDTDQSHVPLVLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...CACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCACTCACAATTGAGATaGCAGCACCTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESHSQLR*QHLPPT
Trigger: AGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTG...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp ACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTCCAACTGTTGAATTTCACTCACAATTGAGATaGCAGCACCTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: TVAHSQLRWQHLPPTVEFHSQLR*QHLPPT
Trigger: AGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTG...AAATTCAACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGACACTCACAATTGAGATaGCAGCACCTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: FWLLIQLLQQILISYHQGHSQLR*QHLPPT
Trigger: AGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTG...TCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp AGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCCATGCAGGGATAGAGTTTGGCAAGCCACCTGCATaGTCAGCTGTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSCFSEAFYQDFHAGIEFGKPPA*SAVGFC
Trigger: ACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC...AAACTCTATCCCTGCATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGAGCTGGGCAAGCTCCTaGTTCAGGCAAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWSWASS*FRQATC
Trigger: GCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp GGGACAGAACCATGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GTEPCAGVKSSRLVDNCCYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...GCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TGTTGCTCTACATTGACAAGTACAGCAGGGTCACTGTTGAAATGGGTTGTGGCAAGAAAATGGCAGCAGTaGGGGAATGACTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: CCSTLTSTAGSLLKWVVARKWQQ*GNDFPK
Trigger: CTTGGGAAAGTCATTCCCCCACTGCTGCCATTTTCT...TGCCACAACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CCA 90 bp ACAAACAAGCCAACACTTGCCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTGTAAGCCACCGTGCCTaGCCACTAGGATATTTTATA +
Preference number: 4 (lower is better)
Translates to: TNKPTLASLPVASWKPCFVSHRA*PLGYFI
Trigger: TATAAAATATCCTAGTGGCCAGGCACGGTGGCTTAC...AAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR TCA 90 bp GTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: VYHCPELQKYLGNPLFPGISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTCGTGTACCATTGCCCTaGGTTGCAGAAGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTRVPLP*VAEVLR
Trigger: CCTAAGTACTTCTGCAACTCAGGGCAATGGTACACG...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GGGACAGAACCATGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: GTEPCAGVKSSRLVDNCCKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...GCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: VYHCPELQKYLGNPLFPGKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR TCA 90 bp ACTCTTGATAGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCCATGCAGGGCAGGCATTTACTCAATaGGGCATCATGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: TLDSSCFSEAFYQDFHAGQAFTQ*GIMGKM
Trigger: CATCTTACCCATGATGCCTCATTGAGTAAATGCCTG...CCCTGCATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR TCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGCATACAGATCTaGACTAAGCTTCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLCGIQI*TKLQKP
Trigger: AGGCTTTTGAAGCTTAGTTCAGATCTGTATGCCACA...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGCAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESNLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCGTGTCTTCAGGATGTaGGCAACACCTCGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGRVFRM*ATPRLR
Trigger: TCTCAGCCGAGGTGTTGCTCACATCCTGAAGACACG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTTTGCCCACTCACAATTaGGATGGCAGCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGLPTHN*DGSTFL
Trigger: GAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAA...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TCCCCAGTGGGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGATCATCATAAGTATGTaGCTGTTGCCCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: SPVGRCLISDHVYHCPELIIISM*LLPTHN
Trigger: ATTGTGAGTGGGCAACAGTCACATACTTATGATGAT...CAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCCCACTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR GCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTACTCTTGATAGTTCTTaGTTCTCTGAGGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCTLDSS*FSEAFY
Trigger: GTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGT...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp CAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGACTCTTGATAGTTCTTaGTTCTCTGAGGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: QHPRRSVLDTDQSHVPLVTLDSS*FSEAFY
Trigger: GTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGT...CACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR GCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGTCAAAAGCCTTCCAGTaGTGGAGTCAGGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGESKAFQ*WSQGLT
Trigger: TGTCAAACCCTGACTCCAGCACTGGAAGGCTTTTGA...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCCGGAGCCATTCCAGTaGTTATCCACAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGPEPFQ*LSTSSR
Trigger: CCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGGTTCAAGCTCCCTCCTaGAGAATGCTTTCATCGTGT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEVQAPS*RMLSSC
Trigger: ACACGATGAAAGCATTCTGCAGGAGGGAGCTTGAAC...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR GCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTTCAGGCAAGCCACCTaGATGGTCAGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRFRQAT*MVSCWF
Trigger: AAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAA...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCACTCTGACCAGTTTTTaGTTCAAACTTTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLTLTSF*FKLSSL
Trigger: CAGCGAGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435835.3
CDS-3UTR GCA 90 bp ATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAACAAGCCAACACTTaGCTCGCTGCCTGTAGCATC +
Preference number: 4 (lower is better)
Translates to: ILSFHLNPLFDGLSDLLVKQANT*LAACSI
Trigger: GATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTT...TACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR GCA 90 bp GGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCAGCTTTTTCAGCTAGGCTGAGACAGGATTaGTTGAGTCCAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GISDFHGEWQLSSPAFSARLRQD*LSPEVQ
Trigger: TTGAACTTCTGGACTCAAGCAATCCTGTCTCAGCCT...AGCTGAAAAAGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR CCA 90 bp GTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGACAACGTGCAGGAATGTGAAGCGGTaGTCTTTATGTCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: VLDTDQSHVPLVRRKTTCRNVKR*SLCHLK
Trigger: CTTCAAATGACATAAAGACCACCGCTTCACATTCCT...GCACGTTGTCTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGTGTCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNPLFDGLSDLLVKIFLCQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...ACACAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCATGTCATTAGGGACTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FLQHSDQFLLQTFHVIRDYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...GTCCCTAATGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567823.5
CDS-3UTR CCA 90 bp ATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTACATACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ILLSTLALTFDAELSPVTYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...TGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000569552.5
CDS-3UTR CCA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTAGTGAACATAAATACTaGATTCCCCGGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SILLSTLALTFDAELSPVSEHKY*IPRLLQ
Trigger: CTGGAGCAGCCGGGGAATCCAGTATTTATGTTCACT...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR TCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTCAAATCCAGTTCTTTaGGGAAGGGTAACGGTTGTA +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESSNPVL*GRVTVV
Trigger: TACAACCGTTACCCTTCCTCAAAGAACTGGATTTGA...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000565019.6
CDS-3UTR TCA 90 bp GGAAGGTGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTTGCAGAAGTACTCAAATCCAGTTCTTTaGGGAAGGGTAACGGTTGTA +
Preference number: 4 (lower is better)
Translates to: GRCLISDHVYHCPELQKYSNPVL*GRVTVV
Trigger: TACAACCGTTACCCTTCCTCAAAGAACTGGATTTGA...GTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACACCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR TCA 90 bp CATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: HPRRSVLDTDQSHVPLVRKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...CCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000568010.5
CDS-3UTR TCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGGCGAGTAGTGTCTaGACTCATCTTCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGEASSV*THLPGD
Trigger: ATCACCAGGAAGATGAGTTCAGACACTACTCGCCTC...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR TCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TTCCTGGTGATTGTCACTTGGCATCTCCCTTCTTGCTACTTCCTGTGTCTGTGTGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: FLVIVTWHLPSCYFLCLCASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...ACACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAAGTGACAATCACCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR TCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTCAGCAGGGTCACTGTTaGAATGGGTTGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGQQGHC*NGLWHT
Trigger: TGTATGCCACAACCCATTTCAACAGTGACCCTGCTG...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TCTGAAAATCTCTTTGAATTTCTAGCCCTGTTGGTCAGAACCACCTCCATTCCCAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: SENLFEFLALLVRTTSIPNLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...GGGAATGGAGGTGGTTCTGACCAACAGGGCTAGAAATTCAAAGAGATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR TCA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCATCATCATAAGTATGTaGCTGTTGCCCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLIIISM*LLPTHN
Trigger: ATTGTGAGTGGGCAACAGTCACATACTTATGATGAT...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTCTACATTGACATTCTGGTCTCGAACCTaGCCTGTTTCTCGCACAAAC +
Preference number: 4 (lower is better)
Translates to: CAGVKSSRLVDNCCSTLTFWSRT*PVSRTN
Trigger: GTTTGTGCGAGAAACAGGTCAGGTTCGAGACCAGAA...TGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR GCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTCAAAAGCCTTCCAGTaGTGGAGTCAGGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRSKAFQ*WSQGLT
Trigger: TGTCAAACCCTGACTCCAGCACTGGAAGGCTTTTGA...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTACTCTGACCAGTTTTTaGTTCAAACTTTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCTLTSF*FKLSMS
Trigger: TGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR CCA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTAGTGAACATAAATACTaGATTCCCTTAAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCSEHKY*IPLRLV
Trigger: CACTAGCCTTAAGGGAATCCAGTATTTATGTTCACT...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000565019.6
CDS-3UTR CCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTTCTAGTCATCTTCTCTaGGGATCGGACTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGSSHLL*GSDCGL
Trigger: CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTAAAGCCTTCCAGTGCTaGAGTCAGGGTTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGKAFQC*SQGLTE
Trigger: CTCTGTCAAACCCTGACTCCAGCACTGGAAGGCTTT...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CACGTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: HVYHCPELQKYLGNPLFPLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...GGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FRLARILSFHLNPLFDGLDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp GTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VYHCPELQKYLGNPLFPGWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000567211.5
CDS-3UTR TCA 90 bp CTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTACACAGTTTATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: LSTLALTFDAELSPVTQFISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...AAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000569552.5
ENST00000570075.5
CDS-3UTR TCA 90 bp TTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCGAGAAACTTCTTGTAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: FLQHSDQFLLQTFRETSCKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...ACAAGAAGTTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGTCTCCACAGGAATGTaGAGCGGTGGTCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGVSTGM*SGGLYV
Trigger: GACATAAAGACCACCGCTTCACATTCCTGTGGAGAC...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp CCATGCTTTAGATTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PCFRFRLARILSFHLNPLIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...GAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp GTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGGGAAGGGAATAAAATATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: VAEVLRESFISRLGKGIKYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...TTTTATTCCCTTCCCCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTTTCCCAAAGGGCGATaGTCTCCCCAGATGATGACC +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWFPKGR*SPQMMT
Trigger: GGTCATCATCTGGGGAGATCATCGCCCTTTGGGAAA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TTATGCTATACTCTTGATAGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCGAGGCGAGTAGTGTCTaGACTCCATTTCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: LCYTLDSSCFSEAFYQDFEASSV*TPFQSC
Trigger: GCAGGATTGAAATGGAGTTCAGACACTACTCGCCTC...GAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGTATAGCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569552.5
CDS-3UTR GCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCAGGAGGAAGACAACGTaGTTTTCCCAAAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGRRKTT*FSQRAM
Trigger: CATCGCCCTTTGGGAAAAGCACGTTGTCTTCCTCCT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCAGGACAGCGTTGTTTaGGACAGAACCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWQDSVV*DRTMCW
Trigger: CCAGCACATGGTTCTGTCCCAAACAACGCTGTCCTG...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp GATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: DHHKYVTVAHSQLRWQHLLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...AAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGTGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGECMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTCCAGCTTTTTCAGCTaGGCAAGCTCCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWSSFFS*ASSWFR
Trigger: CCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
3UTR CAA 72 bp TGGAAACCATGCTTTAGATTCAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: WKPCFRFRLARI*SFHLNPLFDGL
Trigger: AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
3UTR CAA 72 bp GATCATCATAAGTATGTGACTGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCTCCAACTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: DHHKYVTVAHSQ*RWQHLPPTVEF
Trigger: AAATTCAACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
3UTR CAA 72 bp TGTCTAATTTCTGATCACGTGTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CLISDHVYHCPE*QKYLGNPLFPG
Trigger: ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTGATCAGAAATTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR TCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTCTACATTGACAATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: CAGVKSSRLVDNCCSTLTISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...TGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
CDS-3UTR TCA 90 bp CCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGITFWLLIQLLQQILISKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...ACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000568010.5
CDS-3UTR TCA 90 bp GTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: VYHCPELQKYLGNPLFPGKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...ACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGGAGGCGAGTAGTGTCTaGACTCATCTTCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWEASSV*THLPGD
Trigger: ATCACCAGGAAGATGAGTTCAGACACTACTCGCCTC...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR TCA 90 bp TGGCTAGAATCACCCACATCCAGGCATTTACTCAATGAGGCATCATGGGTAAGATTCTGGAGAAGAACCTaGAGACTTATTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: WLESPTSRHLLNEASWVRFWRRT*RLIVQK
Trigger: TTTTTGGACAATAAGTCTTCAGGTTCTTCTCCAGAA...TCTTACCCATGATGCCTCATTGAGTAAATGCCTGGATGTGGGTGATTCTAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR TCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: FRLARILSFHLNPLFDGLASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGGTCTCCACAGGAATGTaGAGCGGTGGTCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWVSTGM*SGGLYV
Trigger: GACATAAAGACCACCGCTTCACATTCCTGTGGAGAC...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGTGGCATACAGATCTaGACTAAGCTTCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRCGIQI*TKLQKP
Trigger: AGGCTTTTGAAGCTTAGTTCAGATCTGTATGCCACA...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTTGTGGCATACAGATCTaGACTAAGCTTCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTCGIQI*TKLQKP
Trigger: AGGCTTTTGAAGCTTAGTTCAGATCTGTATGCCACA...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR TCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTTTTCCTCCAGCACTCTaGCCAGTTTTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGFPPAL*PVFASN
Trigger: GTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAA...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGACCACCAGGGATCTCTaGCTTTCATGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWTTRDL*LSWRMA
Trigger: TGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGATCACGTGTACCATTaGCCTGAGTTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGDHVYH*PELQKY
Trigger: GTACTTCTGCAACTCAGGGCAATGGTACACGTGATC...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp ACAAACAAGCCAACACTTGCCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTGACTGTAAACATAGATaGTACAGAGTTCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: TNKPTLASLPVASWKPCFDCKHR*YRVQSS
Trigger: TGAAGATTGAACTCTGTAGCATCTATGTTTACAGTC...AAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CCA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGGGTCACTGTTGAAATaGGTTGTGGCATACAGATCT +
Preference number: 4 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGGSLLK*VVAYRS
Trigger: AGATCTGTATGCCACAACCCATTTCAACAGTGACCC...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTTTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCGAGAAACTTCTTGGGTCACTGTTGAAATaGGTTGTGGCATACAGATCT +
Preference number: 4 (lower is better)
Translates to: FSSSTLTSFCFKLSEKLLGSLLK*VVAYRS
Trigger: AGATCTGTATGCCACAACCCATTTCAACAGTGACCC...AAGAAGTTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRCMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp ATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTATGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: ILSFHLNPLFDGLSDLLVCMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...TACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCGAGAAACTTCTTGTTGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: FLQHSDQFLLQTFRETSCCMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...ACAAGAAGTTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp CTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTACACAGTTTTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSTLALTFDAELSPVTQFWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...AAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000569552.5
CDS-3UTR CCA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGYSSVI*RQKPWS
Trigger: AGACCACGGTTTTTGCCTCCAGATGACCGAACTGTA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
3UTR CAA 72 bp AAATCATCCAGGCTGGTAGATAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCACTGTTGAAATGGGTT +
Preference number: 4 (lower is better)
Translates to: KSSRLVDNCCST*TSTAGSLLKWV
Trigger: AACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGEKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTTTCTGGAGAAGAACCTaGAGACTTATTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SILLSTLALTFDAELSPVFWRRT*RLIVQK
Trigger: TTTTTGGACAATAAGTCTTCAGGTTCTTCTCCAGAA...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561821.1
ENST00000569552.5
CDS-3UTR TCA 90 bp CTCATTAGTTACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTTTCTGGAGAAGAACCTaGAGACTTATTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LISYHQGSLTFMENGNCLFWRRT*RLIVQK
Trigger: TTTTTGGACAATAAGTCTTCAGGTTCTTCTCCAGAA...AAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTAACTAATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR TCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCAGGCATTTACTCAATaGGGCATCATGGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGQAFTQ*GIMGKM
Trigger: CATCTTACCCATGATGCCTCATTGAGTAAATGCCTG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TGGAAACCATGCTTTAGATTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATATTGTTGCTCTACATTaGCAAGTACAGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: WKPCFRFRLARILSFHLNIVALH*QVQQGH
Trigger: GTGACCCTGCTGTACTTGTCAATGTAGAGCAACAAT...ATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCAATCTTTCTGTGTTCTaGAGTCCCAGGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGNLSVF*SPRRQQ
Trigger: CTGTTGTCTCCTGGGACTTCAGAACACAGAAAGATT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp TTCAGGTTGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTACTCTGACCAGTTTTTaGTTCAAACTTTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: FRLARILSFHLNPLFDGLTLTSF*FKLSMS
Trigger: TGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGT...AAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR GCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGCTCCTTATTCAGCTaGTGCAGCAGATACTCATTA +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGGSLFS*CSRYSL
Trigger: TAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGAGGAATGTGAAGCGGTaGTCTTTATGTCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRRNVKR*SLCHLK
Trigger: CTTCAAATGACATAAAGACCACCGCTTCACATTCCT...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTGGGTCACTGTTGAAATaGGTTGTGGCATACAGATCT +
Preference number: 4 (lower is better)
Translates to: FHLNPLFDGLSDLLVKIFGSLLK*VVAYRS
Trigger: AGATCTGTATGCCACAACCCATTTCAACAGTGACCC...AAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGTGTGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LNPLFDGLSDLLVKIFLCALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...ACACAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CCA 90 bp TTTTCCTCCAGCACTCTGACCAGTTTTTGCTTCAAACTTTCCGAGAAACTTCTTGCTTTAGATTCAGGTTaGCAAGGATATTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FSSSTLTSFCFKLSEKLLALDSG*QGYCPS
Trigger: GGAAGGACAATATCCTTGCCAACCTGAATCTAAAGC...AAGAAGTTTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWISTDF*CRALTC
Trigger: ACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAAT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGAAGGTGTCTAATTTCTaGTCACGTGTACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWKVSNF*SRVPLP
Trigger: GGGCAATGGTACACGTGATCAGAAATTAGACACCTT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTGTGGCATACAGATCTaGACTAAGCTTCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGCGIQI*TKLQKP
Trigger: AGGCTTTTGAAGCTTAGTTCAGATCTGTATGCCACA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTATTGTCCTTCCATTTaGATCCTCTCTTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWYCPSI*ILSSMG
Trigger: GCCCATCGAAGAGAGGATTCAAATGGAAGGACAATA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp GGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGATCATCATAAGTATGTaGCTGTTGCCCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: GFCAEDHHKYVTVAHSQLIIISM*LLPTHN
Trigger: ATTGTGAGTGGGCAACAGTCACATACTTATGATGAT...CAATTGTGAGTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGGGGTCACTGTTGAAATaGGTTGTGGCATACAGATCT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWGSLLK*VVAYRS
Trigger: AGATCTGTATGCCACAACCCATTTCAACAGTGACCC...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGLPVAS*KPCFRF
Trigger: GAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGGACTTTCATGGAGAATaGCAACTGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWDFHGE*QLSSPA
Trigger: AGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTC...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp TTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FHLNPLFDGLSDLLVKIFWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...AAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR TCA 90 bp CTTTATGCTATACTCTTGATAGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTGCATCATGGGTAAGATaGAAAGTATCAGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LYAILLIVLASLRPFTKTASWVR*KVSGFG
Trigger: ACCAAAACCTGATACTTTTCATCTTACCCATGATGC...AGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTGCATGGTCAGCTGTTaGTTTTTGTGCAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWCMVSC*FLCRRS
Trigger: TGATCTTCTGCACAAAAACCAACAGCTGACCATGCA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTGGAGGCAAAAACCGTaGTCTGAGCATGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWWRQKP*SEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
CDS-3UTR TCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTTCTGGAGAAGAACCTaGAGACTTATTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGFWRRT*RLIVQK
Trigger: TTTTTGGACAATAAGTCTTCAGGTTCTTCTCCAGAA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGATCATCATAAGTATGTaGCTGTTGCCCACTCACAAT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWIIISM*LLPTHN
Trigger: ATTGTGAGTGGGCAACAGTCACATACTTATGATGAT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGAAAAAGTCCTTTGTTTaGGTCCATTTCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWKKSFV*VHFNPA
Trigger: AGCAGGATTGAAATGGACTCAAACAAAGGACTTTTT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
CDS-3UTR TCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTTCTGGAGAAGAACCTaGAGACTTATTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWFWRRT*RLIVQK
Trigger: TTTTTGGACAATAAGTCTTCAGGTTCTTCTCCAGAA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR GCA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR GCA 90 bp TTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: FHLNPLFDGLSDLLVKIFLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...AAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp TTTTGTGCAGAAGATCATCATAAGTATGTGACTGTTGCCCACTCACAATTGAGACTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: FCAEDHHKYVTVAHSQLRLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...TCTCAATTGTGAGTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR GCA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTGGTAGATAATTGTTaGTCTACATTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWLVDNC*STLTST
Trigger: TGTACTTGTCAATGTAGAGCAACAATTATCTACCAG...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTCTCGTCCAGCTCCCATaGCTCCGCCATCCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: TTILVAMAVRASVDQGSCLVQLP*LRHPRP
Trigger: CGGGCGGGGATGGCGGAGCAATGGGAGCTGGACGAG...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329956.11
CDS-3UTR CAA 90 bp TTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGCCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: FSWASSWFRQATCMVSCWPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...CCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGGGACCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLGPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCC...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CAA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TTCAGCTGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: FSWASSWFRQATCMVSCWPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...CCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGACCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGGACCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGGPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CAA 90 bp GAAGTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGGGACCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: EVPGDNSSVRRGVVLFPRGPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCC...CCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR CAA 90 bp GGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: GDNSSVRRGVVLFPRTALPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...CAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp AGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: RREPEPFQCLSTSSRSCLVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...CAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTCTCGTCCAGCTCCCATaGCTCCGCCATCCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: SILLSTLALTFDAELSPVLVQLP*LRHPRP
Trigger: CGGGCGGGGATGGCGGAGCAATGGGAGCTGGACGAG...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR CAA 90 bp CGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAACCATGTGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: RRGVVLFPRTALFGTEPCVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: QERFPGITFWLLIQLLQQVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...CTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAACCATGTCCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RRGVVLFPRTALFGTEPCPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGATTTCCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGFPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGAAA...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGTAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp GGAGCCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 5 (lower is better)
Translates to: GAIPVLIHKLQELSEDSGTAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...GCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CCAGATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: PDDDPSQEAGALSRNNLLPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...CAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGATTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp CCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGGACCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PSQEAGALSRNNLLAPYSGPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCC...TGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CAA 90 bp TCATTAGGGACCAGCTGCGCAGCCTCCTTCAGTTCAAGCTCCCTCCTGCAGAATGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: SLGTSCAASFSSSSLLQNVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...ATTCTGCAGGAGGGAGCTTGAACTGAAGGAGGCTGCGCAGCTGGTCCCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CAA 90 bp CCATTCCAGTGCTTATCCACAAGCTCCAGGAGCTGTCTGAGGACAGTGGCCACAGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: PFQCLSTSSRSCLRTVATVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...TGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGATCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
CDS-3UTR CAA 90 bp AGGACCGAGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTGAGGCTGAGACAGGATaGCTTGAGTCCAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: RTEKLLVEEEGAGAIPVLEAETG*LESRSS
Trigger: TGAACTTCTGGACTCAAGCAATCCTGTCTCAGCCTC...AAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR CAA 90 bp ACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGTAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: TTILVAMAVRASVDQGSCNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...ACAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp CCAGATGATGACCCTTCTCAGGAGGCAGGAGCGCTTTCCCGGAATAACCTTTTGTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: PDDDPSQEAGALSRNNLLFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...CAAAAGGTTATTCCGGGAAAGCGCTCCTGCCTCCTGAGAAGGGTCATCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TACCACCAGGGATCTCTGACTTTCATGGAGAATGGCAACTGTCTTCTCCAGCTTGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: YHQGSLTFMENGNCLLQLVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...AAGCTGGAGAAGACAGTTGCCATTCTCCATGAAAGTCAGAGATCCCTGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGAAGCTGAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: YHHTGGNGGESLCGPGKLRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...CAGCTTCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp CCGAGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCCTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: PRNFLLRRREPEPFQCLSLHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...GGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TGGGCAAGCTCCTGGTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: WASSWFRQATCMVSCWFLSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...CAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCTCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LLVEEEGAGAIPVLIHKLSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...GAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGATACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTGTATTAACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 5 (lower is better)
Translates to: HASSISQALGQHPRRSVLTAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...TAATACAGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GAAGTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: EVPGDNSSVRRGVVLFPRNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...CCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp GTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGACCAGGGATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: VHTTILVAMAVRASVDQGCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...TCCCTGGTCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp GTCCCAGGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: VPGDNSSVRRGVVLFPRTCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...TGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GGGACAGAACCATGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCCCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: GTEPCAGVKSSRLVDNCCPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...GCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GGAGACAACAGCAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGCACTCTGACCAGTTTTaGCTTCAAACTTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: GDNSSVRRGVVLFPRTALHSDQF*LQTFHV
Trigger: GACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...CAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTGCTGTTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR CAA 90 bp TCGGCTGAGAAGGAGCCGGGACTACCAAAGACAGAAGCAAATCTCGGGCAGGACCACTCTGACCAGTTTTaGCTTCAAACTTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: SAEKEPGLPKTEANLGQDHSDQF*LQTFHV
Trigger: GACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...GTCCTGCCCGAGATTTGCTTCTGTCTTTGGTAGTCCCGGCTCCTTCTCAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565019.6
ENST00000567823.5
CDS-3UTR CAA 90 bp CATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: HPRRSVLDTDQSHVPLVRVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...CCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GCAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCACTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: AGALSRNNLLAPYSAAAALHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...TGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp AGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGAGGAGGAAGACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 5 (lower is better)
Translates to: RRSVLDTDQSHVPLVRRKTAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...CTTCCTCCTCACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp GTTCAGGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: VQASHLHGQLLVFVQKIIFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...GATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGAAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAGCTCTGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLVEEEGAGAIPVLIHKLCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...GAGCTTGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GAGTTCCATGCTAGCTCTATAAGCCAGGCTCTGGGGCAGCATCCAAGACGCTCTCACTCTGACCAGTTTTaGCTTCAAACTTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: EFHASSISQALGQHPRRSHSDQF*LQTFRE
Trigger: TTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...AGAGCGTCTTGGATGCTGCCCCAGAGCCTGGCTTATAGAGCTAGCATGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS TCA 90 bp GGCATCACCAATGGAATGGATTTTGCCAGCATAAGATCCCTGCAATaGAAGAGACTCCACCAGTTCTGTAGTCTCAGTTACTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GITNGMDFASIRSLQ*KRLHQFCSLSYWGG
Trigger: GCCTCCCCAGTAACTGAGACTACAGAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTATGCTGGCAAAATCCATTCCATTGGTGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR CAA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp CAGGAGCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGTGCTGGAGTCAGGGTTaGACAGAGAAGTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: QERFPGITFWLLIQLLQQCWSQG*TEKLIS
Trigger: ACTTATTAACTTCTCTGTCAAACCCTGACTCCAGCA...CTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp TCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGACGAGGCGAGTAGTGTCTAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SSHLLWGSDCGLTRRVVSNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...AGACACTACTCGCCTCGTCAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp ACAAACAAGCCAACACTTGCCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: TNKPTLASLPVASWKPCFFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...AAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CAA 90 bp ATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: ILSFHLNPLFDGLSDLLVVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...TACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp GGCTCCTTATTCAGCTGCTGCAGCAGATACTCATTAGTTACCACCAGGGATCTCCTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: GSLFSCCSRYSLVTTRDLLHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...GAGATCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGAATAAGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTTCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp CAGCATCCAAGACGCTCTGTATTAGATACTGACCAGTCTCATGTGCCACTGGTGTCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: QHPRRSVLDTDQSHVPLVSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...CACCAGTGGCACATGAGACTGGTCAGTATCTAATACAGAGCGTCTTGGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CACGTGTACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCTTGGCATCTCCCTTCTaGCTACTTCCTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: HVYHCPELQKYLGNPLFPLASPF*LLPVSV
Trigger: CACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAA...GGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTACACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561821.1
CDS-3UTR CAA 90 bp CAGTGTCCGCAGAGGAGTTGTCCTGTTTCCCAGGACAGCGTTGTTTGGGACAGACTTTATGCTATACTCTaGATAGTTCTTGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: QCPQRSCPVSQDSVVWDRLYAIL*IVLASL
Trigger: CAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG...TCTGTCCCAAACAACGCTGTCCTGGGAAACAGGACAACTCCTCTGCGGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp TTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTGGATGCTGGAGTCAGGGTTaGACAGAGAAGTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: FVSTYHHTGGNGGESLCGCWSQG*TEKLIS
Trigger: ACTTATTAACTTCTCTGTCAAACCCTGACTCCAGCA...TCCACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CAA 90 bp TGTTGCTCTACATTGACAAGTACAGCAGGGTCACTGTTGAAATGGGTTGTGGCAACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 5 (lower is better)
Translates to: CCSTLTSTAGSLLKWVVATAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...TGCCACAACCCATTTCAACAGTGACCCTGCTGTACTTGTCAATGTAGAGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567211.5
ENST00000567723.5
CDS-3UTR CAA 90 bp AGAAACTTCTTGTTGAGGAGGAGGGAGCCGGAGCCATTCCAGTGCTTATCCACAAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: RNFLLRRREPEPFQCLSTNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...TGTGGATAAGCACTGGAATGGCTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTTTCCCAGGACAGCGTaGTTTGGGACAGAACCATGT +
Preference number: 5 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESFPRTA*FGTEPC
Trigger: ACATGGTTCTGTCCCAAACAACGCTGTCCTGGGAAA...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp AATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGTGTTCTCCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: NPLFDGLSDLLVKIFLCSPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...AGAACACAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp CATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGGGATACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: HCPELQKYLGNPLFPGWGYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...TCCCCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR CAA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGTTGGCATCTCCCTTCTaGCTACTTCCTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGELASPF*LLPVSV
Trigger: CACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAA...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR CAA 90 bp GCGCTTTCCCGGAATAACCTTTTGGCTCCTTATTCAGCTGCTGCAGCAGATACTTGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ALSRNNLLAPYSAAAADTCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...AGTATCTGCTGCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp ATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCTGTCACTCTGACCAGTTTTaGCTTCAAACTTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: IFVSTYHHTGGNGGESLCHSDQF*LQTFHV
Trigger: GACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...ACAGAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR CAA 90 bp ATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTATTTCCGAGAAACTTCTaGTTGAGGAGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ILSFHLNPLFDGLSDLLVFPRNF*LRRREP
Trigger: CGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGGAAA...TACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAAGGACAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: FLIFVSTYHHTGGNGGESYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...GCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ACTGTTGCCCACTCACAATTGAGATGGCAGCACCTTCCTCCAACTGTTGAATTTTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: TVAHSQLRWQHLPPTVEFYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...AAATTCAACAGTTGGAGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp GGGACAGAACCATGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: GTEPCAGVKSSRLVDNCCYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...GCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACATGGTTCTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TACCATTGCCCTGAGTTGCAGAAGTACTTAGGGAATCCTTTATTTCCCGGTTGGTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: YHCPELQKYLGNPLFPGWYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...CCAACCGGGAAATAAAGGATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561821.1
ENST00000567211.5
ENST00000570075.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCCAGGACAGCGTTGTTaGGGACAGAACCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: FHLNPLFDGLSDLLVKIFPGQRC*GQNHVL
Trigger: CAGCACATGGTTCTGTCCCAAACAACGCTGTCCTGG...AAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567211.5
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGGTGTCCGCAGAGGAGTaGTCCTGTTTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWVSAEE*SCFPGQ
Trigger: CTGTCCTGGGAAACAGGACAACTCCTCTGCGGACAC...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp GGCAAGCCACCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: GKPPAWSAVGFCAEDHHKRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...CTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGGTGGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCGAGAAACTTCTTGTaGAGGAGGAGGGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWPRNFL*RRREPE
Trigger: CTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTCGG...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCCACTCTGACCAGTTTTaGCTTCAAACTTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLHSDQF*LQTFHV
Trigger: GACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000563189.5
ENST00000565019.6
CDS-3UTR CAA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGCTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGELHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGCTCAAATCCAGTTCTTaGAGGAAGGGTAACGGTTGT +
Preference number: 5 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGELKSSS*RKGNGC
Trigger: ACAACCGTTACCCTTCCTCAAAGAACTGGATTTGAG...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000565019.6
CDS-3UTR CAA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTCTCAAATCCAGTTCTTaGAGGAAGGGTAACGGTTGT +
Preference number: 5 (lower is better)
Translates to: SILLSTLALTFDAELSPVLKSSS*RKGNGC
Trigger: ACAACCGTTACCCTTCCTCAAAGAACTGGATTTGAG...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570075.5
CDS-3UTR CAA 90 bp AGATACTTGGTACCCTTCTCTAGTCATCTTCTCTGGGGATCGGACTGTGGACTGCTTTATGCTATACTCTaGATAGTTCTTGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: RYLVPFSSHLLWGSDCGLLYAIL*IVLASL
Trigger: CAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG...CAGTCCACAGTCCGATCCCCAGAGAAGATGACTAGAGAAGGGTACCAAGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567723.5
ENST00000569552.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGTTGCCCACTCACAATaGAGATGGCAGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGVAHSQ*RWQHLP
Trigger: AGGAAGGTGCTGCCATCTCAATTGTGAGTGGGCAAC...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTGTTGCCCACTCCCGGAATAACCTTTaGGCTCCTTATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SAVGFCAEDHHKYVTVAHSRNNL*APYSAA
Trigger: AGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGA...GTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS TCA 90 bp GAGAGAGGCCATTTCAATCCTGCTGTCAACATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGTTACACAGTTTTTCATTGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ERGHFNPAVNISTDF*CRALTCYTVFHCLL
Trigger: GAGAAGACAATGAAAAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGAAATGGCCTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567823.5
CDS-3UTR CAA 90 bp TCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTGTTGCCCACTACCATTGCCCTGAGTaGCAGAAGTACTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: SAVGFCAEDHHKYVTVAHYHCPE*QKYLGN
Trigger: ATTCCCTAAGTACTTCTGCAACTCAGGGCAATGGTA...GTGGGCAACAGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000565019.6
ENST00000567723.5
ENST00000568010.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTTGGCATCTCCCTTCTaGCTACTTCCTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGLASPF*LLPVSV
Trigger: CACAGACACAGGAAGTAGCAAGAAGGGAGATGCCAA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
CDS-3UTR CAA 90 bp TTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGAGCCTCCTTTATGCTATACTCTaGATAGTTCTTGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LIFVSTYHHTGGNGGESLLYAIL*IVLASL
Trigger: CAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG...GAGGCTCTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCACAGCAGGGTCACTGTaGAAATGGGTTGTGGCATAC +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGTAGSL*KWVVAY
Trigger: GTATGCCACAACCCATTTCAACAGTGACCCTGCTGT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGTGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGECFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TCAATCCTGCTGTCAACATTAGCACTGACTTTTGATGCAGAGCTCTCACCTGTTTGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SILLSTLALTFDAELSPVCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...AACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CAA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTCTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGLHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TGTGCTGGTGTTAAATCATCCAGGCTGGTAGATAATTGTTGCTCTACATTGACAGAATTTCTAGCCCTGTaGGTCAGAACCACCTCCATT +
Preference number: 5 (lower is better)
Translates to: CAGVKSSRLVDNCCSTLTEFLAL*VRTTSI
Trigger: AATGGAGGTGGTTCTGACCAACAGGGCTAGAAATTC...TGTCAATGTAGAGCAACAATTATCTACCAGCCTGGATGATTTAACACCAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CAA 90 bp TTCCATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTTCAACAGGTGTTAGCTaGGCAGTATTAGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: FHLNPLFDGLSDLLVKIFSTGVS*AVLATS
Trigger: GCTGGTGGCTAATACTGCCAAGCTAACACCTGTTGA...AAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567211.5
CDS-3UTR CAA 90 bp CATTTGAATCCTCTCTTCGATGGGCTTAGTGACCTCTTGGTAAAAATCTTTCTGCTCAAATCCAGTTCTTaGAGGAAGGGTAACGGTTGT +
Preference number: 5 (lower is better)
Translates to: HLNPLFDGLSDLLVKIFLLKSSS*RKGNGC
Trigger: ACAACCGTTACCCTTCCTCAAAGAACTGGATTTGAG...CAGAAAGATTTTTACCAAGAGGTCACTAAGCCCATCGAAGAGAGGATTCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS-3UTR CAA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGCTGGAGTCAGGGTTaGACAGAGAAGTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRCWSQG*TEKLIS
Trigger: ACTTATTAACTTCTCTGTCAAACCCTGACTCCAGCA...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CAA 90 bp CATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: HFFLNLCEYIPPYWWQWRNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...CCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCCTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGLHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS TCA 90 bp GACTCTTTCCATTTCAATCCTGCTGTCAACATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGTTACACAGTTTTTCATTGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: DSFHFNPAVNISTDF*CRALTCYTVFHCLL
Trigger: GAGAAGACAATGAAAAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGAAATGGAAAGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS TCA 90 bp TCTGAACTCCATTTCAATCCTGCTGTCAACATTAGCACTGACTTTTaGTGCAGAGCTCTCACCTGTTACACAGTTTTTCATTGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SELHFNPAVNISTDF*CRALTCYTVFHCLL
Trigger: GAGAAGACAATGAAAAACTGTGTAACAGGTGAGAGCTCTGCATCAAAAGTCAGTGCTAATGTTGACAGCAGGATTGAAATGGAGTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569552.5
CDS GCA 90 bp ACTAGGGGTTCAGAATACCTTCCTATTAATGGGAAAGACTATCCTTaGAAGCTAGGGAAACAGACCTTTAAGCAAAGGTCCAGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: TRGSEYLPINGKDYP*KLGKQTFKQRSSLS
Trigger: ACTTAAACTGGACCTTTGCTTAAAGGTCTGTTTCCCTAGCTTGCAAGGATAGTCTTTCCCATTAATAGGAAGGTATTCTGAACCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569121.1
CDS-3UTR CAA 90 bp TCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTGAGCTTTATGCTATACTCTaGATAGTTCTTGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SFLIFVSTYHHTGGNGGELYAIL*IVLASL
Trigger: CAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG...CTCACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CAA 90 bp ATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCGGTAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: ISFLIFVSTYHHTGGNGGRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...ACCGCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTGCATGGTCAGCTGTaGGTTTTTGTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWLHGQL*VFVQKI
Trigger: GATCTTCTGCACAAAAACCAACAGCTGACCATGCAG...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TGCTATACTCTTGATAGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCCATCACTCTGACCAGTTTTaGCTTCAAACTTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: CYTLDSSCFSEAFYQDFHHSDQF*LQTFRE
Trigger: TTCTCGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...ATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGTATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp TTATGCTATACTCTTGATAGTTCTTGCTTCTCTGAGGCCTTTTACCAAGACTTCAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: LCYTLDSSCFSEAFYQDFRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...GAAGTCTTGGTAAAAGGCCTCAGAGAAGCAAGAACTATCAAGAGTATAGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp TACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: YISFLIFVSTYHHTGGNGCFRFR*ARILSF
Trigger: GAAGGACAATATCCTTGCCAACCTGAATCTAAAGCA...GCCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCACTCTGACCAGTTTTaGCTTCAAACTTTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWHSDQF*LQTFLA
Trigger: AGCGAGGAAAGTTTGAAGCAAAAACTGGTCAGAGTG...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435835.3
CDS-3UTR CAA 90 bp CCTGCATGGTCAGCTGTTGGTTTTTGTGCAGAAGATCATCATAAGTATGTGACTGGAATAAAAAGTCCTTaGTTTGAGTCTGTAATCCCA +
Preference number: 5 (lower is better)
Translates to: PAWSAVGFCAEDHHKYVTGIKSP*FESVIP
Trigger: TGGGATTACAGACTCAAACAAAGGACTTTTTATTCC...AGTCACATACTTATGATGATCTTCTGCACAAAAACCAACAGCTGACCATGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567723.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGTGCTGGAGTCAGGGTTaGACAGAGAAGTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWCWSQG*TEKLIS
Trigger: ACTTATTAACTTCTCTGTCAAACCCTGACTCCAGCA...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGAATTGTTGCTCTACATaGACAAGTACAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWNCCST*TSTAGS
Trigger: TGACCCTGCTGTACTTGTCAATGTAGAGCAACAATT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGAGGTTGGCAAGGATATaGTCCTTCCATTTGAATCCT +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWRLARI*SFHLNP
Trigger: AGGATTCAAATGGAAGGACAATATCCTTGCCAACCT...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000565019.6
ENST00000567723.5
CDS-3UTR CAA 90 bp ATACATTTCTTTCTTAATCTTTGTGAGTACATACCACCATACTGGTGGCAATGGCTTTATGCTATACTCTaGATAGTTCTTGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: IHFFLNLCEYIPPYWWQWLYAIL*IVLASL
Trigger: CAGAGAAGCAAGAACTATCAAGAGTATAGCATAAAG...CCATTGCCACCAGTATGGTGGTATGTACTCACAAAGATTAAGAAAGAAATGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329956.11
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
CDS GCA 72 bp TTCAGGTCTTGGAGTGAACATAAATACTGGATTCCCTaGCACCGCCCGCGAGACCACCCGGCGCACGCCAGG +
Preference number: 6 (lower is better)
Translates to: FRSWSEHKYWIP*HRPRDHPAHAR
Trigger: CCTGGCGTGCGCCGGGTGGTCTCGCGGGCGGTGGCAGGGAATCCAGTATTTATGTTCACTCCAAGACCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563303.5
CDS TCA 72 bp AATGGAATGGATTTTGCCAGCATAAGATCCCTGCAATaGAAGAGACTCCACCAGTTCCGGCTGCTCCAGCGT +
Preference number: 6 (lower is better)
Translates to: NGMDFASIRSLQ*KRLHQFRLLQR
Trigger: ACGCTGGAGCAGCCGGAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTATGCTGGCAAAATCCATTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329956.11
ENST00000569228.6
CDS CAA 90 bp TCCTCGCTGCCTGTAGCATCTTGGAAACCATGCTTTAGATTCAGGTaGGCAAGGATATTGTCCTTCCATTTGAATCCTCTCTTCGATGGG +
Preference number: 6 (lower is better)
Translates to: SSLPVASWKPCFRFR*ARILSFHLNPLFDG
Trigger: CCCATCGAAGAGAGGATTCAAATGGAAGGACAATATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435835.3
CDS TCA 72 bp AATGGAATGGATTTTGCCAGCATAAGATCCCTGCAATaGAAGAGACTCCACCAGTTCGCTTCTCTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: NGMDFASIRSLQ*KRLHQFASLWF
Trigger: GAACCACAGAGAAGCGAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTATGCTGGCAAAATCCATTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566558.1
ENST00000568804.6
CDS CCA 72 bp AGCTTTTCTCTCACCTTCACGTACAGTTCGGTCATCTaGAGGCAAAAACCGTGGTCTGAGCATGTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SFSLTFTYSSVI*RQKPWSEHVSF
Trigger: AAAAGAAACATGCTCAGACCACGGTTTTTGCCTCCAGATGACCGAACTGTACGTGAAGGTGAGAGAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435835.3
ENST00000563189.5
ENST00000567723.5
ENST00000567823.5
ENST00000568010.5
CDS TCA 72 bp AATGGAATGGATTTTGCCAGCATAAGATCCCTGCAATaGAAGAGACTCCACCAGTTCTGTAGTCTCAGTTAC +
Preference number: 6 (lower is better)
Translates to: NGMDFASIRSLQ*KRLHQFCSLSY
Trigger: GTAACTGAGACTACAGAACTGGTGGAGTCTCTTTCATTGCAGGGATCTTATGCTGGCAAAATCCATTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565019.6
CDS CCA 72 bp TTTTGCTTCAAACTTTCCTCGCTGCCTGTAGCATCTTaGAAACCATGCTTTAGATTCAGGTTGGCAAGGATA +
Preference number: 6 (lower is better)
Translates to: FCFKLSSLPVAS*KPCFRFRLARI
Trigger: TATCCTTGCCAACCTGAATCTAAAGCATGGTTTCCAAGATGCTACAGGCAGCGAGGAAAGTTTGAAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435835.3
CDS GCA 72 bp TCAGAATACCTTCCTATTAATGGGAAAGACTATCCTTaGAAGCTAGGGAAACAGACCTTTAAGCAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: SEYLPINGKDYP*KLGKQTFKQRS
Trigger: GGACCTTTGCTTAAAGGTCTGTTTCCCTAGCTTGCAAGGATAGTCTTTCCCATTAATAGGAAGGTATTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569121.1