RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC32 (Homo sapiens)

Ensembl gene IDs: ENSG00000137507

Ensembl transcript IDs: ENST00000260061.9, ENST00000404995.5, ENST00000407242.6, ENST00000421973.1, ENST00000464145.1

Found 549 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCACAGCCGGGGCAGGACTCACCGCACCAAACCAGCGGGGCCTaGCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGC +
Preference number: 1 (lower is better)
Translates to: LAQPGQDSPHQTSGA*RALEPWAFTPQALS
Trigger: GCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTGCCCCGGCTGTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp GACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTaGGCTTTCACACCTCAGGCCCTAAGCACACTGCGTGGCGGCCAC +
Preference number: 1 (lower is better)
Translates to: DSPHQTSGACRALEP*AFTPQALSTLRGGH
Trigger: GTGGCCGCCACGCAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp AAGGGAGAGGGCAAGTCCAGAGCAGGAGACGGAATGGTCCAGTGCTaGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCC +
Preference number: 1 (lower is better)
Translates to: KGEGKSRAGDGMVQC*AGPLNQTLLEPPWP
Trigger: GGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTCTGGACTTGCCCTCTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp TCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGCGTaGCGGCCACGTGGCTCTGCAGCACTCTCTCCTACCAGACTGGGA +
Preference number: 1 (lower is better)
Translates to: SGALGFHTSGPKHTA*RPRGSAALSPTRLG
Trigger: TCCCAGTCTGGTAGGAGAGAGTGCTGCAGAGCCACGTGGCCGCCACGCAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 90 bp GAGACGGAATGGTCCAGTGCTGGGCTGGACCCCTTAACCAGACCCTaGTGGAGCCGCCGTGGCCCACCTAACAACACCAGATCCGAGACA +
Preference number: 1 (lower is better)
Translates to: ETEWSSAGLDPLTRP*WSRRGPPNNTRSET
Trigger: TGTCTCGGATCTGGTGTTGTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 90 bp GAAAGGAAGGGAGGAGGGAAACAGGCAGAGAAGGAGGAGAGCGCCTaGAGCTGCCTGCCTGGGAGAGAGGAGAGAGCAGGTGTGCACAGC +
Preference number: 1 (lower is better)
Translates to: ERKGGGKQAEKEESA*SCLPGREERAGVHS
Trigger: GCTGTGCACACCTGCTCTCTCCTCTCTCCCAGGCAGGCAGCTGCAGGCGCTCTCCTCCTTCTCTGCCTGTTTCCCTCCTCCCTTCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 90 bp TGGGGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTaGAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: WGPTPWPPGLRRSVT*SSTRGCDPNQDWVC
Trigger: GCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR CCA 90 bp ACGGAATGGTCCAGTGCTGGGCTGGACCCCTTAACCAGACCCTGCTaGAGCCGCCGTGGCCCACCTAACAACACCAGATCCGAGACACAC +
Preference number: 1 (lower is better)
Translates to: TEWSSAGLDPLTRPC*SRRGPPNNTRSETH
Trigger: GTGTGTCTCGGATCTGGTGTTGTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp AGAGTGCCAGGAAGGGAGAGGGCAAGTCCAGAGCAGGAGACGGAATaGTCCAGTGCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: RVPGRERASPEQETE*SSAGLDPLTRPCWS
Trigger: GCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTCTGGACTTGCCCTCTCCCTTCCTGGCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 90 bp CCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTaGAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGA +
Preference number: 1 (lower is better)
Translates to: PCSGYVGPLPVHLTA*SPCSGKDQALETEG
Trigger: TCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 90 bp GAGAGGAGAGAGCAGGTGTGCACAGCACAGGATGCTTCCAGACCCTaGTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGC +
Preference number: 1 (lower is better)
Translates to: ERREQVCTAQDASRP*SGYVGPLPVHLTAC
Trigger: GCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTGCTGTGCACACCTGCTCTCTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp ACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTaGCCCTCCCTCACCCTGGCACAGCCGGGGCAGGACTCACCGCAC +
Preference number: 1 (lower is better)
Translates to: TNSLLGNVSDKSSWA*PSLTLAQPGQDSPH
Trigger: GTGCGGTGAGTCCTGCCCCGGCTGTGCCAGGGTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp GACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTaGGCTTGGCCCTCCCTCACCCTGGCACAGCCGGGGCAGGACTCA +
Preference number: 1 (lower is better)
Translates to: DVTNSLLGNVSDKSS*AWPSLTLAQPGQDS
Trigger: TGAGTCCTGCCCCGGCTGTGCCAGGGTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp CTGCGTGGCGGCCACGTGGCTCTGCAGCACTCTCTCCTACCAGACTaGGAGATTCTTGAGGGCGGGAATGTATCTCATTTCCCAGCATTC +
Preference number: 1 (lower is better)
Translates to: LRGGHVALQHSLLPD*EILEGGNVSHFPAF
Trigger: GAATGCTGGGAAATGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGAGTGCTGCAGAGCCACGTGGCCGCCACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 90 bp GCCCTGTGTAGTGTTTTCAAAGATCAGGCGTGGGGACCCACACCTTaGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCCGT +
Preference number: 1 (lower is better)
Translates to: ALCSVFKDQAWGPTP*PPGLRRSVTCSSTR
Trigger: ACGGGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGAAAACACTACACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR CCA 90 bp TGGGAAGTGACAGCAGCCCTGTGTAGTGTTTTCAAAGATCAGGCGTaGGGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACG +
Preference number: 1 (lower is better)
Translates to: WEVTAALCSVFKDQA*GPTPWPPGLRRSVT
Trigger: CGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGAAAACACTACACAGGGCTGCTGTCACTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR CCA 90 bp TTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGGGCCCTaGGAAGTGACAGCAGCCCTGTGTAGTGTTTTCAAAGATCAGGCG +
Preference number: 1 (lower is better)
Translates to: LYKELVPRPGLRPGP*EVTAALCSVFKDQA
Trigger: CGCCTGATCTTTGAAAACACTACACAGGGCTGCTGTCACTTCCCAGGGCCCAGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR CCA 90 bp GAGAGACTGAAAGTCATTCTCAGAAGACGTGACAAACAGTCTGCTTaGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCTCAC +
Preference number: 1 (lower is better)
Translates to: ERLKVILRRRDKQSA*KCLRQILLGLALPH
Trigger: GTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATGACTTTCAGTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 90 bp AGATTCTTGAGGGCGGGAATGTATCTCATTTCCCAGCATTCCCAGTaGCCAGAGCAGGGTGTGGCACAAAATACATGCTCAGTGAAGATT +
Preference number: 1 (lower is better)
Translates to: RFLRAGMYLISQHSQ*PEQGVAQNTCSVKI
Trigger: AATCTTCACTGAGCATGTATTTTGTGCCACACCCTGCTCTGGGCACTGGGAATGCTGGGAAATGAGATACATTCCCGCCCTCAAGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR TCA 90 bp AAGCTTTTCATTTTCAGAGAGACTGAAAGTCATTCTCAGAAGACGTaGCAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: KLFIFRETESHSQKT*QTVCLEMSQTNPPG
Trigger: CCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATGACTTTCAGTCTCTCTGAAAATGAAAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACCGAGCTCTGGAGCCCTaGGCTTTCACACCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNRALEP*AFTPQA
Trigger: GGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCG...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTCTCAGGCTCCCCCACTaGCCTAGAGTGTCTCCCGGC +
Preference number: 2 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTLRLPH*PRVSPG
Trigger: GCCGGGAGACACTCTAGGTCAGTGGGGGAGCCTGAG...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGCAGCTGGACCCAAAGTaGAGCCCGGGAAGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: ACRALEPWAFTPQALSTLQLDPK*SPGRGS
Trigger: TGACCCCCTTCCCGGGCTGCACTTTGGGTCCAGCTG...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTCAAACCAGCGGGGCCTaGCGAGCTCTGGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTQTSGA*RALEPW
Trigger: CCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTG...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCGAGAGCGCCTGCAGCTaGCTGCCTGGGAGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTESACS*LPGREE
Trigger: CTCCTCTCTCCCAGGCAGGCAGCTGCAGGCGCTCTC...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTCAGCTGGACCCAAAGTaGAGCCCGGGAAGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTQLDPK*SPGRGS
Trigger: TGACCCCCTTCCCGGGCTGCACTTTGGGTCCAGCTG...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTCCTAAGCACACTGCGTaGCGGCCACGTGGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTPKHTA*RPRGSA
Trigger: TGCAGAGCCACGTGGCCGCCACGCAGTGTGCTTAGG...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCAGGACTGGGTCTGCCTaGGTGCTCCACACACCACCA +
Preference number: 2 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTRTGSA*VLHTPP
Trigger: TGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCT...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACTCCTGGGCTGTAATTTaGAGACCAGAGTTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNSWAVI*RPEFWD
Trigger: ATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGA...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAAGAGCAGGAGACGGAATaGTCCAGTGCTGGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDEEQETE*SSAGLD
Trigger: GTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTC...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTAGACTGGGAGATTCTTaGGGGCGGGAATGTATCTCA +
Preference number: 2 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTRLGDS*GRECIS
Trigger: TGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCT...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp CAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGCAGTCAGGGTATGCAACATaGGAGTGCCAGGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: QTLLGLCGATSCPLNGLQSGYAT*ECQEGR
Trigger: TCTCCCTTCCTGGCACTCTCATGTTGCATACCCTGA...CTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCGTCCACTTAACGGCCTaGAGCCCCTGCAGTGGTAAA +
Preference number: 2 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTVHLTA*SPCSGK
Trigger: TTTACCACTGCAGGGGCTGCAGGCCGTTAAGTGGAC...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCAGCAAAACAAGGTCTTaGGTTGGTCCCAGCACGTCC +
Preference number: 2 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTSKTRS*VGPSTS
Trigger: GGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCT...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR-3UTR CCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACAGAGAAAGGTGTCCTaGGCTGTAATTTGGAGACCA +
Preference number: 2 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPQRKVS*AVIWRP
Trigger: TGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTG...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGCTGGGCAGGGACGGTaGTTAGAGCAGCACTGGGGT +
Preference number: 2 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSAGQGR*LEQHWG
Trigger: ACCCCAGTGCTGCTCTAAGCACCGTCCCTGCCCAGC...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAAAGACTGGGAGATTCTTaGGGGCGGGAATGTATCTCA +
Preference number: 2 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDERLGDS*GRECIS
Trigger: TGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCT...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTTCCCAGCATTCCCAGTaGCCAGAGCAGGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSSQHSQ*PEQGVA
Trigger: TGCCACACCCTGCTCTGGGCACTGGGAATGCTGGGA...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTACGGCCTGCAGCCCCTaGAGTGGTAAAGATCAGGCC +
Preference number: 2 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSTACSP*SGKDQA
Trigger: GGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCGT...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTGTAAAGATCAGGCCCTaGAGACAGAAGGATGAAGGT +
Preference number: 2 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTVKIRP*RQKDEG
Trigger: ACCTTCATCCTTCTGTCTCCAGGGCCTGATCTTTAC...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTCCTGCTCGGGCTATGTaGGGCCACTTCCTGTCCACT +
Preference number: 2 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSPARAM*GHFLST
Trigger: AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGG...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTATTCTCGGCTGTCCCTaGAACCGCCCAACTTCTGGC +
Preference number: 2 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPILGCP*NRPTSG
Trigger: GCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAAT...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCCTGGAGACAGAAGGATaGAGGTTTGAATCTCACCTA +
Preference number: 2 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTLETEG*RFESHL
Trigger: TAGGTGAGATTCAAACCTTCATCCTTCTGTCTCCAG...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTCCCTTAACCAGACCCTaGTGGAGCCGCCGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PEALYKLSTSFILFLSLSPLTRP*WSRRGP
Trigger: TGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGG...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAGGAATGGTCCAGTGCTaGGCTGGACCCCTTAACCAG +
Preference number: 2 (lower is better)
Translates to: IGADTRLGFKSTSAKLGAGMVQC*AGPLNQ
Trigger: CTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCC...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGCTCAGGCTCCCCCACTaGCCTAGAGTGTCTCCCGGC +
Preference number: 2 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLLRLPH*PRVSPG
Trigger: GCCGGGAGACACTCTAGGTCAGTGGGGGAGCCTGAG...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAACATTCTCAGAAGACGTaGCAAACAGTCTGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDEHSQKT*QTVCLE
Trigger: TTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATG...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCTCTGGCTTCCACAGCTaGACCCAAAGTGCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPSGFHS*TQSAAR
Trigger: CCGGGCTGCACTTTGGGTCCAGCTGTGGAAGCCAGA...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTCTGGCTTCCACAGCTaGACCCAAAGTGCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWASGFHS*TQSAAR
Trigger: CCGGGCTGCACTTTGGGTCCAGCTGTGGAAGCCAGA...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGTCAGACAAATCCTCCTaGGCTTGGCCCTCCCTCACC +
Preference number: 2 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGSDKSS*AWPSLT
Trigger: GGTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGA...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGCCTAAGCACACTGCGTaGCGGCCACGTGGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLPKHTA*RPRGSA
Trigger: TGCAGAGCCACGTGGCCGCCACGCAGTGTGCTTAGG...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAATTCTCGGCTGTCCCTaGAACCGCCCAACTTCTGGC +
Preference number: 2 (lower is better)
Translates to: RHKAWIQIHICQAGCKTEILGCP*NRPTSG
Trigger: GCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAAT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACACAGAGAAAGGTGTCCTaGGCTGTAATTTGGAGACCA +
Preference number: 2 (lower is better)
Translates to: RSTLFSAVPETAQLLASTQRKVS*AVIWRP
Trigger: TGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTG...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGTCAGGGTATGCAACATaGGAGTGCCAGGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: EAQKGSLEPALSCDVIAESGYAT*ECQEGR
Trigger: TCTCCCTTCCTGGCACTCTCATGTTGCATACCCTGA...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR GCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGATCTGCCAAGCTGGGTaGAAAACAGAACCAGATATC +
Preference number: 2 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGICQAG*KTEPDI
Trigger: GATATCTGGTTCTGTTTTGCACCCAGCTTGGCAGAT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAAGTAAAGATCAGGCCCTaGAGACAGAAGGATGAAGGT +
Preference number: 2 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEVKIRP*RQKDEG
Trigger: ACCTTCATCCTTCTGTCTCCAGGGCCTGATCTTTAC...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGAAGATTTGTTGATCTaGCAGGTCAACATTATTCTC +
Preference number: 2 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSEDLLI*QVNIIL
Trigger: GAGAATAATGTTGACCTGTCAGATCAACAAATCTTC...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAACATTCTCAGAAGACGTaGCAAACAGTCTGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: RHKAWIQIHICQAGCKTEHSQKT*QTVCLE
Trigger: TTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATG...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTGACAAACAGTCTGCTTaGAAATGTCTCAGACAAATC +
Preference number: 2 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSDKQSA*KCLRQI
Trigger: GATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTC...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR TCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGAGAAGGATGAAGGTTTaGATCTCACCTATGGCATTA +
Preference number: 2 (lower is better)
Translates to: EAQKGSLEPALSCDVIAERRMKV*ISPMAL
Trigger: TAATGCCATAGGTGAGATTCAAACCTTCATCCTTCT...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 72 bp CCGGGGCAGGACTCACCGCACCAAACCAGCGGGGCCTaGCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAG +
Preference number: 3 (lower is better)
Translates to: PGQDSPHQTSGA*RALEPWAFTPQ
Trigger: CTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp CACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTaGGCTTTCACACCTCAGGCCCTAAGCACACTGCGT +
Preference number: 3 (lower is better)
Translates to: HQTSGACRALEP*AFTPQALSTLR
Trigger: ACGCAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 72 bp TGGTCCAGTGCTGGGCTGGACCCCTTAACCAGACCCTaGTGGAGCCGCCGTGGCCCACCTAACAACACCAGA +
Preference number: 3 (lower is better)
Translates to: WSSAGLDPLTRP*WSRRGPPNNTR
Trigger: TCTGGTGTTGTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp GGCAAGTCCAGAGCAGGAGACGGAATGGTCCAGTGCTaGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCG +
Preference number: 3 (lower is better)
Translates to: GKSRAGDGMVQC*AGPLNQTLLEP
Trigger: CGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTCTGGACTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp GGAAGGGAGAGGGCAAGTCCAGAGCAGGAGACGGAATaGTCCAGTGCTGGGCTGGACCCCTTAACCAGACCC +
Preference number: 3 (lower is better)
Translates to: GRERASPEQETE*SSAGLDPLTRP
Trigger: GGGTCTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTCTGGACTTGCCCTCTCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 72 bp GGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTaGAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: GYVGPLPVHLTA*SPCSGKDQALE
Trigger: CTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp GAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGGGCCCTaGGAAGTGACAGCAGCCCTGTGTAGTGTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: ELVPRPGLRPGP*EVTAALCSVFK
Trigger: TTTGAAAACACTACACAGGGCTGCTGTCACTTCCCAGGGCCCAGGCCTCAGCCCAGGCCTCGGGACCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR GCA 72 bp ACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTaGAGTAGCACCCGTGGGTGTGATCCCAACCAGGAC +
Preference number: 3 (lower is better)
Translates to: TPWPPGLRRSVT*SSTRGCDPNQD
Trigger: GTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR-3UTR CAA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTGTCCTGGGCTGTAATTaGGAGACCAGAGTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTVLGCN*ETRVLG
Trigger: TCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGAC...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR-3UTR CAA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCAAACAAGGTCTTGAGTaGGTCCCAGCACGTCCATTC +
Preference number: 3 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTKQGLE*VPARPF
Trigger: GAATGGACGTGCTGGGACCAACTCAAGACCTTGTTT...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR TCA 72 bp TTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATaGCTCCATGGTATGAGGGATGGGGGTCATCTGGGT +
Preference number: 3 (lower is better)
Translates to: LVPARPFFPDSS*LHGMRDGGHLG
Trigger: ACCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR CCA 72 bp AGCAGGCGGCAGAGAAAGGTGTCCTGGGCTGTAATTTaGAGACCAGAGTTCTGGGATCCCGGATCACTGTGT +
Preference number: 3 (lower is better)
Translates to: SRRQRKVSWAVI*RPEFWDPGSLC
Trigger: ACACAGTGATCCGGGATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTGCCGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp GGCCACGTGGCTCTGCAGCACTCTCTCCTACCAGACTaGGAGATTCTTGAGGGCGGGAATGTATCTCATTTC +
Preference number: 3 (lower is better)
Translates to: GHVALQHSLLPD*EILEGGNVSHF
Trigger: GAAATGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGAGTGCTGCAGAGCCACGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp AGTGTTTTCAAAGATCAGGCGTGGGGACCCACACCTTaGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGT +
Preference number: 3 (lower is better)
Translates to: SVFKDQAWGPTP*PPGLRRSVTCS
Trigger: ACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGAAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR TCA 72 bp TCTGCAGCACTCTCTCCTACCAGACTGGGAGATTCTTaGGGGCGGGAATGTATCTCATTTCCCAGCATTCCC +
Preference number: 3 (lower is better)
Translates to: SAALSPTRLGDS*GRECISFPSIP
Trigger: GGGAATGCTGGGAAATGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGAGTGCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR GCA 72 bp AGGGCGGGAATGTATCTCATTTCCCAGCATTCCCAGTaGCCAGAGCAGGGTGTGGCACAAAATACATGCTCA +
Preference number: 3 (lower is better)
Translates to: RAGMYLISQHSQ*PEQGVAQNTCS
Trigger: TGAGCATGTATTTTGTGCCACACCCTGCTCTGGGCACTGGGAATGCTGGGAAATGAGATACATTCCCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp AAAGTCATTCTCAGAAGACGTGACAAACAGTCTGCTTaGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: KVILRRRDKQSA*KCLRQILLGLA
Trigger: GGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CCA 72 bp AATATAGAGCTGTCACATAGGGGCAGACACAAGGCTTaGATTCAAATCCACATCTGCCAAGCTGGGTGCAAA +
Preference number: 3 (lower is better)
Translates to: NIELSHRGRHKA*IQIHICQAGCK
Trigger: TTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTATGTGACAGCTCTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR TCA 72 bp ATTTTCAGAGAGACTGAAAGTCATTCTCAGAAGACGTaGCAAACAGTCTGCTTGGAAATGTCTCAGACAAAT +
Preference number: 3 (lower is better)
Translates to: IFRETESHSQKT*QTVCLEMSQTN
Trigger: ATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATGACTTTCAGTCTCTCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGCAGGGAGGTCACGCGTaGCAGGGGGCCCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALQGGHA*QGAQAT
Trigger: GGTGGCCTGGGCCCCCTGCCACGCGTGACCTCCCTG...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCGCTGGCATTCCCGCTaGGGGCTGAGAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALARWHSR*GLRGAG
Trigger: CCCTGCCCCTCTCAGCCCCCAGCGGGAATGCCAGCG...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGAAAGGGGGCGGCCGCTaGCATTCCCGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALKGGGR*HSRWGL
Trigger: CAGCCCCCAGCGGGAATGCCAGCGGCCGCCCCCTTT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCATCCCGAGGCCTGGGCTaGGGCCTGGGCCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPSRGLG*GLGPGK
Trigger: CTTCCCAGGGCCCAGGCCTCAGCCCAGGCCTCGGGA...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGCAAACCAGCGGGGCCTaGCGAGCTCTGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALQTSGA*RALEPW
Trigger: CCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTG...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTAGAGGCGCCGGAGGCTaGTCTCCAGGCCACCCATGG +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALARGAGG*SPGHPW
Trigger: CCATGGGTGGCCTGGAGACCAGCCTCCGGCGCCTCT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGATCGCCAGCCGGTTGTaGGCCAGGCTGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALIASRL*ARLRCS
Trigger: GGAGCACCTCAGCCTGGCTCACAACCGGCTGGCGAT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTAGGCGGCCAGCGTGGTaGGGAGGATGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALARRPAW*GGWQRP
Trigger: TGGTCTCTGCCATCCTCCTCACCACGCTGGCCGCCT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTAAGGAGGAGAGCGCCTaGAGCTGCCTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QDSPHQTSGACRALEPWAKEESA*SCLPGR
Trigger: TCTCCCAGGCAGGCAGCTGCAGGCGCTCTCCTCCTT...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTCAGGGAGGTCACGCGTaGCAGGGGGCCCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGQGGHA*QGAQAT
Trigger: GGTGGCCTGGGCCCCCTGCCACGCGTGACCTCCCTG...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTAAAGGGGGCGGCCGCTaGCATTCCCGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTKGGGR*HSRWGL
Trigger: CAGCCCCCAGCGGGAATGCCAGCGGCCGCCCCCTTT...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTGTCCAGGCGGGAAGGTaGCTCAGGCGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALAVQAGR*LRRFSA
Trigger: TGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGAC...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGGTAGAAGCCCAGGGGTaGGGCCAGGATACTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALVEAQG*GQDTPQ
Trigger: CTGCGGAGTATCCTGGCCTCACCCCTGGGCTTCTAC...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGGCTGCGGAGGGAGGTaGTGCCGGAGAAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTGCGGR*CRRRPH
Trigger: GTGTGGCCTTCTCCGGCATCACCTCCCTCCGCAGCC...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACCTGGGCCCTGGGAAGTaGCAGCAGCCCTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNLGPGK*QQPCVV
Trigger: CACTACACAGGGCTGCTGTCACTTCCCAGGGCCCAG...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTGTGGAGGAAGGCCCCTaGCCTGAGCAGCTCTATCTC +
Preference number: 4 (lower is better)
Translates to: QDSPHQTSGACRALEPWAVEEGP*PEQLYL
Trigger: GAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCAC...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGCAGGGCAGGTCCACCTaGAGGACCATCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALQGRST*RTISPL
Trigger: CAACGGGCTGATGGTCCTGCAGGTGGACCTGCCCTG...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACAAACCAGCGGGGCCTaGCGAGCTCTGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPQTSGA*RALEPW
Trigger: CCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTG...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTAGAGGCGCCGGAGGCTaGTCTCCAGGCCACCCATGG +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTRGAGG*SPGHPW
Trigger: CCATGGGTGGCCTGGAGACCAGCCTCCGGCGCCTCT...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAACGTCCACACGGCCCTaGTGCAGCTGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPTSTRP*CSWAAS
Trigger: GCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGT...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGAGATCAGGTCCTGGGTaGCGTCCACGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALRSGPG*RPRPHG
Trigger: GCCGTGTGGACGTGGACGCCACCCAGGACCTGATCT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGTCCTCGGGACGCACGTaGCTCAGGGACACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TQSAAREGGHPLMQQAAESSGRT*LRDTSS
Trigger: GGAGGAGGTGTCCCTGAGCCACGTGCGTCCCGAGGA...CTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGTTGGTCCCGAGGCCTaGGCTGAGGCCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGVGPEA*AEAWAL
Trigger: CAGGGCCCAGGCCTCAGCCCAGGCCTCGGGACCAAC...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTAGTCTCGGCACATTTTaGGCAAACCCGCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALASLGTF*ANPPPG
Trigger: ACCCGGGGGCGGGTTTGCGCAAAATGTGCCGAGACT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR GCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTTGCAGGTTGAGCCGCTaGAGGCTGGCCAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALACRLSR*RLARLA
Trigger: TGCCAATCTGGCCAGCCTGCAGCGGCTCAACCTGCA...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCGTGGAGGAAGGCCCCTaGCCTGAGCAGCTCTATCTC +
Preference number: 4 (lower is better)
Translates to: SGACRALEPWAFTPQALSVEEGP*PEQLYL
Trigger: GAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCAC...GCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACTGGTGCAGCTGGGCTaGCAGCCAGCCATTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPLVQLG*QPAIAA
Trigger: TGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAG...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGACGGCCTGCAGCCCCTaGAGTGGTAAAGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALTACSP*SGKDQA
Trigger: GGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCGT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTGATGCTTCCAGACCCTaGTCGGGCTATGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALADASRP*SGYVGP
Trigger: TGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATC...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAGAGAGCGCCTGCAGCTaGCTGCCTGGGAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPESACS*LPGREE
Trigger: CTCCTCTCTCCCAGGCAGGCAGCTGCAGGCGCTCTC...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTAACCAGGACTGGGTCTaGCTGGGTGCTCCACACACC +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALANQDWV*LGAPHT
Trigger: GGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTAGCACCCGCAGCTGCTaGAGGCTGAAGTCGGAGATG +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALASTRSC*RLKSEM
Trigger: CATCTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACTTGCTGTCCTGGGGTaGCCCTGTGGGGAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPLAVLG*PCGEPD
Trigger: ATCCGGCTCCCCACAGGGCCACCCCAGGACAGCAAG...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTAAAGGGGGCGGCCGCTaGCATTCCCGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTKGGGR*HSRWGL
Trigger: CAGCCCCCAGCGGGAATGCCAGCGGCCGCCCCCTTT...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACTCCAGATTCAAGAGCTaGGAAAGGGGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNSRFKS*ERGRPL
Trigger: CAGCGGCCGCCCCCTTTCCCAGCTCTTGAATCTGGA...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCATTGGCAAAGGTGTATaGGGGCAGGTCCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGACRALEPWAFTPQALSIGKGV*GQVPQG
Trigger: GCCCTGCGGGACCTGCCCCCATACACCTTTGCCAAT...GCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTTCAGACAAATCCTCCTaGGCTTGGCCCTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: QDSPHQTSGACRALEPWASDKSS*AWPSLT
Trigger: GGTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGA...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGAAGGTGGGGCTGCGATaGAGAAGTGGGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TQSAAREGGHPLMQQAAEKVGLR*RSGAGQ
Trigger: CTGCCCAGCCCCACTTCTCCATCGCAGCCCCACCTT...CTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACCCTGCTCGGGCTATGTaGGGCCACTTCCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNPARAM*GHFLST
Trigger: AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGG...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGGGTTGTGAGCCAGGCTaGGGTGCTCCAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLGCEPG*GAPGGS
Trigger: TGACCCACCTGGAGCACCTCAGCCTGGCTCACAACC...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACAATTCCTGGAGAGGTTaGGATGGGTCAGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNNSWRG*DGSGGA
Trigger: TGCCCCGCCTGACCCATCTCAACCTCTCCAGGAATT...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGACTGAGCCCACATCATaGGCCAGACTGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALTEPTS*ARLWAK
Trigger: CTTGGCCCACAGTCTGGCTCATGATGTGGGCTCAGT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGAGGCCTCGATGCTGTTaGAGCTCAGGTCTAGCACCC +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALRPRCC*SSGLAP
Trigger: GGGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTCTGGTGCAGCTGGGCTaGCAGCCAGCCATTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGLVQLG*QPAIAA
Trigger: TGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAG...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACGACGGAATGGTCCAGTaGTGGGCTGGACCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNDGMVQ*WAGPLN
Trigger: GTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTC...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGCTGGGCAGGGACGGTaGTTAGAGCAGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTAGQGR*LEQHWG
Trigger: ACCCCAGTGCTGCTCTAAGCACCGTCCCTGCCCAGC...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTAGCACCGAGGGGACCTaGAGCAGGCCCAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGSTEGT*SRPRTW
Trigger: CCAGGTTCTGGGCCTGCTCCAGGTCCCCTCGGTGCT...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTCTGGAGAGGTTGAGATaGGTCAGGCGGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTLERLR*VRRGRP
Trigger: GGGTCTGCCCCGCCTGACCCATCTCAACCTCTCCAG...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGATTGGCAAAGGTGTATaGGGGCAGGTCCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQSAAREGGHPLMQQAAEIGKGV*GQVPQG
Trigger: GCCCTGCGGGACCTGCCCCCATACACCTTTGCCAAT...CTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCACGTCCACACGGCCCTaGTGCAGCTGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTTSTRP*CSWAAS
Trigger: GCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGT...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGCAGTGCGTGGCGGCCACGTaGCTCTGCAGCACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTLLGLCGATSCPLNGLQCVAAT*LCSTLS
Trigger: GGAGAGAGTGCTGCAGAGCCACGTGGCCGCCACGCA...CTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGCCTAAGCACACTGCGTaGCGGCCACGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLPKHTA*RPRGSA
Trigger: TGCAGAGCCACGTGGCCGCCACGCAGTGTGCTTAGG...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGGGAATGGTCCAGTGCTaGGCTGGACCCCTTAACCAG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALGMVQC*AGPLNQ
Trigger: CTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCC...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCCCTCAGCTGACTTACTaGCAGAGTGGGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SGACRALEPWAFTPQALSPQLTY*QSGVLG
Trigger: TCCCAGGACCCCACTCTGCCAGTAAGTCAGCTGAGG...GCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGCTGGCTGGAGGAAGCTaGTCTCATTGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALLAGGS*SHWCSG
Trigger: ACCTGAGCACCAATGAGATCAGCTTCCTCCAGCCAG...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGACTGTTCTCCGCCAGTaGGAGGGTATGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLTVLRQ*EGMQAG
Trigger: CCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGT...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTCCAGCCCTCGGAAGGTaGGTGGATGCCCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGPALGR*VDALAV
Trigger: GACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGG...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGTCCTTCCCTAAGCCCTaGCAACGACCCCTCACACGC +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLSFPKP*QRPLTR
Trigger: GCGTGTGAGGGGTCGTTGGCAGGGCTTAGGGAAGGA...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407242.6
CDS-3UTR CCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGAGCACCCGCAGCTGCTaGAGGCTGAAGTCGGAGATG +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLSTRSC*RLKSEM
Trigger: CATCTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCT...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGCCGCAGCAGCTGAGTaGATTCCCCTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTAAAAE*IPLQVE
Trigger: CTCTACCTGCAGGGGAATCCACTCAGCTGCTGCGGC...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCATCTGGCTTCCACAGCTaGACCCAAAGTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPSGFHS*TQSAAR
Trigger: CCGGGCTGCACTTTGGGTCCAGCTGTGGAAGCCAGA...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTGCGTGGCGGCCACGTaGCTCTGCAGCACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTCVAAT*LCSTLS
Trigger: GGAGAGAGTGCTGCAGAGCCACGTGGCCGCCACGCA...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGGATCCCAACCAGGACTaGGTCTGCCTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLDPNQD*VCLGAP
Trigger: TGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATC...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCGGCTGGGAGGCCGTCTaGAAGGCCTCGATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAGWEAV*KASMLL
Trigger: CAACAGCATCGAGGCCTTTCAGACGGCCTCCCAGCC...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTCATTGCCGCAGCAGCTaGGTGGATTCCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGHCRSS*VDSPAG
Trigger: ACCTGCAGGGGAATCCACTCAGCTGCTGCGGCAATG...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCCCTCCTCCTGGGAGCTaGAGCGGCAGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAPPPGS*SGRSGP
Trigger: AGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGG...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCAGCAAAACAAGGTCTTaGGTTGGTCCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: SGACRALEPWAFTPQALSSKTRS*VGPSTS
Trigger: GGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCT...GCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGTGGGGGTCATCTGGGTaGGGCTTTTTACCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALWGSSG*GFLPRV
Trigger: CACTCTAGGTAAAAAGCCTCACCCAGATGACCCCCA...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404995.5
CDS-3UTR GCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACTATGCAGGTCAAGCTaGTCCAGCGCAGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPLCRSS*SSAGMS
Trigger: GGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAG...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGCTATGCAGGTCAAGCTaGTCCAGCGCAGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLLCRSS*SSAGMS
Trigger: GGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAG...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTACTGGGGTCAGGGTATaGAACATGAGAGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALATGVRV*NMRVPG
Trigger: TCCTGGCACTCTCATGTTGCATACCCTGACCCCAGT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGGTCCACTTAACGGCCTaGAGCCCCTGCAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TQSAAREGGHPLMQQAAEVHLTA*SPCSGK
Trigger: TTTACCACTGCAGGGGCTGCAGGCCGTTAAGTGGAC...CTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTAACCAGGACTGGGTCTaGCTGGGTGCTCCACACACC +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGNQDWV*LGAPHT
Trigger: GGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTT...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGGCCTGGAAGGCTCCTaGCTGGAGGAAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGGLEGS*LEEADL
Trigger: GAGATCAGCTTCCTCCAGCCAGGAGCCTTCCAGGCC...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCAAGGTGGGGCTGCGATaGAGAAGTGGGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTKVGLR*RSGAGQ
Trigger: CTGCCCAGCCCCACTTCTCCATCGCAGCCCCACCTT...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTGGGATGGGGGTCATCTaGGTGAGGCTTTTTACCTGT +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALAGMGVI*VRLFTC
Trigger: ACAGGTAAAAAGCCTCACCCAGATGACCCCCATCCC...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGATCCCAACCAGGACTaGGTCTGCCTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGDPNQD*VCLGAP
Trigger: TGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATC...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGGACCCACACCTTaGCCTCCAGGCCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAWGPTP*PPGLRR
Trigger: CCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCA...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGAGGAGCAGCAGGATCTaGGGTCTCATGGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TQSAAREGGHPLMQQAAERSSRI*GLMAPK
Trigger: CTTTGGAGCCATGAGACCCCAGATCCTGCTGCTCCT...CTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407242.6
CDS-3UTR TCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAGGAAGGCCCCTGCCCTaGGCAGCTCTATCTCATTAT +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPGRPLP*AALSHY
Trigger: ATAATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCC...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACAGACTGGGAGATTCTTaGGGGCGGGAATGTATCTCA +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNRLGDS*GRECIS
Trigger: TGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCT...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTTCCCGAGGCCTGGGCTaGGGCCTGGGCCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSSRGLG*GLGPGK
Trigger: CTTCCCAGGGCCCAGGCCTCAGCCCAGGCCTCGGGA...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTTGTCCATCAGCACGTTaGTATGCAGGTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALACPSAR*YAGQAA
Trigger: AGCAGCTTGACCTGCATAGCAACGTGCTGATGGACA...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTTGTTGGTTAAACTTCTaGCGGCGGACGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTCWLNF*RRTQQQ
Trigger: CTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACA...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTAGGAGCAGCAGGATCTaGGGTCTCATGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGRSSRI*GLMALA
Trigger: AGCCAGAGCCATGAGACCCCAGATCCTGCTGCTCCT...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR CCA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACACAGGGAGGTCACGCGTaGCAGGGGGCCCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RSTLFSAVPETAQLLASTQGGHA*QGAQAT
Trigger: GGTGGCCTGGGCCCCCTGCCACGCGTGACCTCCCTG...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTCAAGCCAGGTGAGCTaGAACTCAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSASSQVS*NSAWGW
Trigger: CCAGCCCCAGGCTGAGTTCCAGCTCACCTGGCTTGA...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGCGCTGGCATTCCCGCTaGGGGCTGAGAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGRWHSR*GLRGAG
Trigger: CCCTGCCCCTCTCAGCCCCCAGCGGGAATGCCAGCG...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCTCCAGATTCAAGAGCTaGGAAAGGGGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTSRFKS*ERGRPL
Trigger: CAGCGGCCGCCCCCTTTCCCAGCTCTTGAATCTGGA...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGGTCTCCAGGGCATTGTaGCTTAAGTCAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: GLGLPGCSTHHQGLALALVSRAL*LKSRSI
Trigger: GATGCTCCTTGACTTAAGCCACAATGCCCTGGAGAC...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCATTGGCAAAGGTGTATaGGGGCAGGTCCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAIGKGV*GQVPQG
Trigger: GCCCTGCGGGACCTGCCCCCATACACCTTTGCCAAT...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCTCTGGCTTCCACAGCTaGACCCAAAGTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTSGFHS*TQSAAR
Trigger: CCGGGCTGCACTTTGGGTCCAGCTGTGGAAGCCAGA...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAACCTAAGCACACTGCGTaGCGGCCACGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDEPKHTA*RPRGSA
Trigger: TGCAGAGCCACGTGGCCGCCACGCAGTGTGCTTAGG...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAGGCCCTCCCTCACCCTaGCACAGCCGGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSGPPSP*HSRGRT
Trigger: AGTCCTGCCCCGGCTGTGCCAGGGTGAGGGAGGGCC...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCGGCCCTCCCTCACCCTaGCACAGCCGGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSGPPSP*HSRGRT
Trigger: AGTCCTGCCCCGGCTGTGCCAGGGTGAGGGAGGGCC...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTTCAGACAAATCCTCCTaGGCTTGGCCCTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGSDKSS*AWPSLT
Trigger: GGTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGA...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCGAGCAGGAGACGGAATaGTCCAGTGCTGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTEQETE*SSAGLD
Trigger: GTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTC...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCACAAGTTCAGGTAGATaGGTCTCGGGAGCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTTSSGR*VSGARP
Trigger: TGGCCGCGCTCCCGAGACTCATCTACCTGAACTTGT...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGCAGGCAAGCAGTTTCTGCTaGGGTTCAGGAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: QTLLGLCGATSCPLNGLQASSFC*GSGSTG
Trigger: CCCTGTGCTTCCTGAACCTCAGCAGAAACTGCTTGC...CTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGCAGCCTGGCTCTGCCCATTaGCTCTCCCTTAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: QTLLGLCGATSCPLNGLQPGSAH*LSLNFL
Trigger: GAGGAAGTTAAGGGAGAGTCAATGGGCAGAGCCAGG...CTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTAGGCCTCGATGCTGTTaGAGCTCAGGTCTAGCACCC +
Preference number: 4 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTRPRCC*SSGLAP
Trigger: GGGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCT...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGCGGCCCTGGTGCAGCTaGGCTGCCAGCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGRPWCS*AASQPL
Trigger: CAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCG...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACTCCTCGGGACGCACGTaGCTCAGGGACACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CDLESVLTLLCTSGSPTDSSGRT*LRDTSS
Trigger: GGAGGAGGTGTCCCTGAGCCACGTGCGTCCCGAGGA...GTCAGTGGGGGAGCCTGAGGTACAGAGAAGAGTGAGGACTGACTCAAGGTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTATGGCATTAGTTAGCTaGGGCCCTGGAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: PGLGLPGCSTHHQGLALAMALVS*GPGRRF
Trigger: AAATCTCCTTCCAGGGCCCCAGCTAACTAATGCCAT...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACGTAAAGATCAGGCCCTaGAGACAGAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNVKIRP*RQKDEG
Trigger: ACCTTCATCCTTCTGTCTCCAGGGCCTGATCTTTAC...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCTCCTCTGTAAAATaGGGTGGAGAGAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: QDSPHQTSGACRALEPWAFSSVK*GGESGI
Trigger: AATGCCACTCTCTCCACCCCATTTTACAGAGGAGAA...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACCTGAGGCCTGGGCCCTaGGAAGTGACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CDLESVLTLLCTSGSPTDLRPGP*EVTAAL
Trigger: CAGGGCTGCTGTCACTTCCCAGGGCCCAGGCCTCAG...GTCAGTGGGGGAGCCTGAGGTACAGAGAAGAGTGAGGACTGACTCAAGGTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCGACTTACTGGCAGAGTaGGGTCCTGGGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTDLLAE*GPGRAA
Trigger: AGCAGCTCTCCCAGGACCCCACTCTGCCAGTAAGTC...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407242.6
CDS-3UTR TCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGAAAGCTGTCGGGGATaGGCTCAATCTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTESCRG*AQSHCS
Trigger: GCTACAATGAGATTGAGCTCATCCCCGACAGCTTTC...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCAGGCGGCCAGCGTGGTaGGGAGGATGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSRRPAW*GGWQRP
Trigger: TGGTCTCTGCCATCCTCCTCACCACGCTGGCCGCCT...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTTTCCCAGACAGCTCATaGCTCCATGGTATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTFPDSS*LHGMRD
Trigger: ATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAA...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTCCTGGCTCTGCCCATTaGCTCTCCCTTAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTPGSAH*LSLNFL
Trigger: GAGGAAGTTAAGGGAGAGTCAATGGGCAGAGCCAGG...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGCCCGTTGCCCTGCAGTaGCAGGACCTCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGPVALQ*QDLQGG
Trigger: GCCTCCTTGGAGGTCCTGGCACTGCAGGGCAACGGG...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCCCCGTTGCCCTGCAGTaGCAGGACCTCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSPVALQ*QDLQGG
Trigger: GCCTCCTTGGAGGTCCTGGCACTGCAGGGCAACGGG...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTATTCAAATCCACATCTaGCAAGCTGGGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: QDSPHQTSGACRALEPWAIQIHI*QAGCKT
Trigger: TGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAAT...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGGTCTCATGGCTCTaGCTCAGCGCGGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSGVSWL*LSAAAA
Trigger: AGCTGCGGCCGCGCTGAGCCAGAGCCATGAGACCCC...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATCTGGGGTCTCATaGCTCTGGCTCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEGSGVS*LWLSAA
Trigger: GGCCGCGCTGAGCCAGAGCCATGAGACCCCAGATCC...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR CCA 90 bp CACAGGATGCTTCCAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTCAGGGCACTTTGTCTTaGTGTTGTGCAGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HRMLPDPARAMWGHFLSTQGTLS*CCAARP
Trigger: AGGCCTGGCTGCACAACACCAAGACAAAGTGCCCTG...AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAAGGATACTCCGCAGCTaGTTCCCAGATAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPRILRS*FPDRSR
Trigger: CCTTGATCTATCTGGGAACCAGCTGCGGAGTATCCT...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACCTGAGGTGCTCCAGGTaGGTCAGGGCCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: CDLESVLTLLCTSGSPTDLRCSR*VRAWKA
Trigger: AGCCTTCCAGGCCCTGACCCACCTGGAGCACCTCAG...GTCAGTGGGGGAGCCTGAGGTACAGAGAAGAGTGAGGACTGACTCAAGGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGCTTGCTGTCCTGGGGTaGCCCTGTGGGGAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGLAVLG*PCGEPD
Trigger: ATCCGGCTCCCCACAGGGCCACCCCAGGACAGCAAG...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGCGCTGGCATTCCCGCTaGGGGCTGAGAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIERWHSR*GLRGAG
Trigger: CCCTGCCCCTCTCAGCCCCCAGCGGGAATGCCAGCG...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCTCTCCAGGCCACCCATaGCACTGCCTGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSSPGHP*HCLAGG
Trigger: GCCTCCTGCCAGGCAGTGCCATGGGTGGCCTGGAGA...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGTCCTCGGGACGCACGTaGCTCAGGGACACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYESSGRT*LRDTSS
Trigger: GGAGGAGGTGTCCCTGAGCCACGTGCGTCCCGAGGA...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGTCCTGGGCTGTAATTTaGAGACCAGAGTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TQSAAREGGHPLMQQAAESWAVI*RPEFWD
Trigger: ATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGA...CTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCTTCAAAGATCAGGCGTaGGGACCCACACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTFKDQA*GPTPWP
Trigger: AGGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGAA...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGGGTTGTGAGCCAGGCTaGGGTGCTCCAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGGCEPG*GAPGGS
Trigger: TGACCCACCTGGAGCACCTCAGCCTGGCTCACAACC...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTATCGCCAGCCGGTTGTaGGCCAGGCTGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSIASRL*ARLRCS
Trigger: GGAGCACCTCAGCCTGGCTCACAACCGGCTGGCGAT...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGCAGGAAAGCTGTCGGGGATaGGCTCAATCTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: QTLLGLCGATSCPLNGLQESCRG*AQSHCS
Trigger: GCTACAATGAGATTGAGCTCATCCCCGACAGCTTTC...CTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTCTCAGGCTCCCCCACTaGCCTAGAGTGTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSLRLPH*PRVSPG
Trigger: GCCGGGAGACACTCTAGGTCAGTGGGGGAGCCTGAG...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCACAGGGCAGGTCCACCTaGAGGACCATCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSQGRST*RTISPL
Trigger: CAACGGGCTGATGGTCCTGCAGGTGGACCTGCCCTG...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCCAGCTGGACCCAAAGTaGAGCCCGGGAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSQLDPK*SPGRGS
Trigger: TGACCCCCTTCCCGGGCTGCACTTTGGGTCCAGCTG...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGCTGGGCAGGGACGGTaGTTAGAGCAGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEAGQGR*LEQHWG
Trigger: ACCCCAGTGCTGCTCTAAGCACCGTCCCTGCCCAGC...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAGAGAGCGCCTGCAGCTaGCTGCCTGGGAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGAESACS*LPGREE
Trigger: CTCCTCTCTCCCAGGCAGGCAGCTGCAGGCGCTCTC...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGGGGGTCTCATGGCTCTaGCTCAGCGCGGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGGVSWL*LSAAAA
Trigger: AGCTGCGGCCGCGCTGAGCCAGAGCCATGAGACCCC...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGAAGGGTCTCAGTGTCTaGCGGGAGCACCGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEKGLSV*REHRGD
Trigger: GTCCCCTCGGTGCTCCCGCCAGACACTGAGACCCTT...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGCTGAGGTGCTCCAGGTaGGTCAGGGCCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGLRCSR*VRAWKA
Trigger: AGCCTTCCAGGCCCTGACCCACCTGGAGCACCTCAG...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTTCTCCAGGCCACCCATaGCACTGCCTGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSSPGHP*HCLAGG
Trigger: GCCTCCTGCCAGGCAGTGCCATGGGTGGCCTGGAGA...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGAGAGGCGCCGGAGGCTaGTCTCCAGGCCACCCATGG +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGRGAGG*SPGHPW
Trigger: CCATGGGTGGCCTGGAGACCAGCCTCCGGCGCCTCT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGCGGCAGATCAGGTCCTaGGTGGCGTCCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYERQIRS*VASTST
Trigger: TGTGGACGTGGACGCCACCCAGGACCTGATCTGCCG...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCACGGCAGATCAGGTCCTaGGTGGCGTCCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSRQIRS*VASTST
Trigger: TGTGGACGTGGACGCCACCCAGGACCTGATCTGCCG...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGGGCAGACACAAGGCTTaGATTCAAATCCACATCTGC +
Preference number: 4 (lower is better)
Translates to: ACRALEPWAFTPQALSTLGRHKA*IQIHIC
Trigger: GCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCC...CAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCACTGAGGCCTGGGCCCTaGGAAGTGACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGALRPGP*EVTAAL
Trigger: CAGGGCTGCTGTCACTTCCCAGGGCCCAGGCCTCAG...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTCTGAGGCCTGGGCCCTaGGAAGTGACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPLRPGP*EVTAAL
Trigger: CAGGGCTGCTGTCACTTCCCAGGGCCCAGGCCTCAG...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGGTTGGTCCCGAGGCCTaGGCTGAGGCCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LIHSGRLYKELVPRPGLRVGPEA*AEAWAL
Trigger: CAGGGCCCAGGCCTCAGCCCAGGCCTCGGGACCAAC...CCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGGGAAGGTGTGGCGGGTaGGGCGAGTCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGGRCGG*GESDCS
Trigger: AGAACAGTCTGACTCGCCTCACCCGCCACACCTTCC...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp TGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACAATTCCTGGAGAGGTTaGGATGGGTCAGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CDLESVLTLLCTSGSPTDNSWRG*DGSGGA
Trigger: TGCCCCGCCTGACCCATCTCAACCTCTCCAGGAATT...GTCAGTGGGGGAGCCTGAGGTACAGAGAAGAGTGAGGACTGACTCAAGGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGGCTGGGAGGCCGTCTaGAAGGCCTCGATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPGWEAV*KASMLL
Trigger: CAACAGCATCGAGGCCTTTCAGACGGCCTCCCAGCC...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACATTCTCAGAAGACGTaGCAAACAGTCTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPHSQKT*QTVCLE
Trigger: TTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATG...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GGACCCACACCTTGGCCTCCAGGCCTAAGGAGGAGTGTTACGTGCAGTAGCACCTTCCCAGACAGCTCATaGCTCCATGGTATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GPTPWPPGLRRSVTCSSTFPDSS*LHGMRD
Trigger: ATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAA...GGTGCTACTGCACGTAACACTCCTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGTCACAGTCTGGCCTCTaGGGTCCTCTCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGSQSGL*GPLSLL
Trigger: GAGGAGGGAGAGAGGACCTCAGAGGCCAGACTGTGA...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407242.6
CDS-3UTR GCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAAGTCTCGGCACATTTTaGGCAAACCCGCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSSLGTF*ANPPPG
Trigger: ACCCGGGGGCGGGTTTGCGCAAAATGTGCCGAGACT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR GCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTCGGAAGGTGCGTGGATaGCCTTGCTGTCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPRKVRG*PCCPGV
Trigger: CACCCCAGGACAGCAAGGGCATCCACGCACCTTCCG...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCCAGCCCTCGGAAGGTaGGTGGATGCCCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTAPALGR*VDALAV
Trigger: GACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCTGCAGGTTGAGCCGCTaGAGGCTGGCCAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSCRLSR*RLARLA
Trigger: TGCCAATCTGGCCAGCCTGCAGCGGCTCAACCTGCA...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGTGCAGGTTGAGCCGCTaGAGGCTGGCCAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYECRLSR*RLARLA
Trigger: TGCCAATCTGGCCAGCCTGCAGCGGCTCAACCTGCA...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCTGACTCGGTTCCCCTaGAGGTTGAGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTALTRFP*RLSRCR
Trigger: CCTGCAGCGGCTCAACCTGCAGGGGAACCGAGTCAG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCGTGGAGGAAGGCCCCTaGCCTGAGCAGCTCTATCTC +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSVEEGP*PEQLYL
Trigger: GAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCAC...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGCCCGTTGCCCTGCAGTaGCAGGACCTCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIEPVALQ*QDLQGG
Trigger: GCCTCCTTGGAGGTCCTGGCACTGCAGGGCAACGGG...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGATCAGCCCGTTGCCCTaGAGTGCCAGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEISPLP*SARTSK
Trigger: CTTGGAGGTCCTGGCACTGCAGGGCAACGGGCTGAT...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCTCCCAGCATTCCCAGTaGCCAGAGCAGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPSQHSQ*PEQGVA
Trigger: TGCCACACCCTGCTCTGGGCACTGGGAATGCTGGGA...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAATCTGCCAAGCTGGGTaGAAAACAGAACCAGATATC +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPICQAG*KTEPDI
Trigger: GATATCTGGTTCTGTTTTGCACCCAGCTTGGCAGAT...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAACGGCCTGCAGCCCCTaGAGTGGTAAAGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSTACSP*SGKDQA
Trigger: GGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCGT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCAGCACTCAGCGCAGTaGCCATCGCCAGCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTAQHSAQ*PSPAGC
Trigger: ACAACCGGCTGGCGATGGCCACTGCGCTGAGTGCTG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTCTGGAGAGGTTGAGATaGGTCAGGCGGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSLERLR*VRRGRP
Trigger: GGGTCTGCCCCGCCTGACCCATCTCAACCTCTCCAG...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCTGGAGAGGTTGAGATaGGTCAGGCGGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTALERLR*VRRGRP
Trigger: GGGTCTGCCCCGCCTGACCCATCTCAACCTCTCCAG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCTCAAGCCAGGTGAGCTaGAACTCAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPSSQVS*NSAWGW
Trigger: CCAGCCCCAGGCTGAGTTCCAGCTCACCTGGCTTGA...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGACGTCCACACGGCCCTaGTGCAGCTGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LIHSGRLYKELVPRPGLRTSTRP*CSWAAS
Trigger: GCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGT...CCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCGAGCTCTGGAGCCCTaGGCTTTCACACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTARALEP*AFTPQA
Trigger: GGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAGTAGAAGCCCAGGGGTaGGGCCAGGATACTCCGCAG +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSVEAQG*GQDTPQ
Trigger: CTGCGGAGTATCCTGGCCTCACCCCTGGGCTTCTAC...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGGAAGGTGTGGCGGGTaGGGCGAGTCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPGRCGG*GESDCS
Trigger: AGAACAGTCTGACTCGCCTCACCCGCCACACCTTCC...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACAGGAAGGTGTGGCGGGTaGGGCGAGTCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSTLFSAVPETAQLLASTGRCGG*GESDCS
Trigger: AGAACAGTCTGACTCGCCTCACCCGCCACACCTTCC...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGTGCCTGGCAGGAGGCTaGAGCTGTTGTTTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGCLAGG*SCCFAG
Trigger: ACCTGCGAAACAACAGCTTCAGCCTCCTGCCAGGCA...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTCATTGCCGCAGCAGCTaGGTGGATTCCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSHCRSS*VDSPAG
Trigger: ACCTGCAGGGGAATCCACTCAGCTGCTGCGGCAATG...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAAAGGCGGCCAGCGTGGTaGGGAGGATGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEERRPAW*GGWQRP
Trigger: TGGTCTCTGCCATCCTCCTCACCACGCTGGCCGCCT...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCCTCAGGCTCCCCCACTaGCCTAGAGTGTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPLRLPH*PRVSPG
Trigger: GCCGGGAGACACTCTAGGTCAGTGGGGGAGCCTGAG...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGATTCTCGGCTGTCCCTaGAACCGCCCAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEILGCP*NRPTSG
Trigger: GCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAAT...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCACTGGGCCCTGGGAAGTaGCAGCAGCCCTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSLGPGK*QQPCVV
Trigger: CACTACACAGGGCTGCTGTCACTTCCCAGGGCCCAG...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGGTCCAGGTGACGAAGTaGTGTGTAGAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGVQVTK*CVEAQG
Trigger: CCCCTGGGCTTCTACACAGCACTTCGTCACCTGGAC...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTTCTAGCACCCGCAGCTaGTGGAGGCTGAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPSSTRS*WRLKSE
Trigger: CTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCTAGA...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACCCCTTAACCAGACCCTaGTGGAGCCGCCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDPLTRP*WSRRGP
Trigger: TGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGG...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCACCCTTAACCAGACCCTaGTGGAGCCGCCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPPLTRP*WSRRGP
Trigger: TGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGG...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGATGCTTCCAGACCCTaGTCGGGCTATGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPDASRP*SGYVGP
Trigger: TGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATC...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGTGCACAGCACAGGATaGTTCCAGACCCTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPVHSTG*FQTLLG
Trigger: CCCGAGCAGGGTCTGGAAGCATCCTGTGCTGTGCAC...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTGGCCTGGAAGGCTCCTaGCTGGAGGAAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTAGLEGS*LEEADL
Trigger: GAGATCAGCTTCCTCCAGCCAGGAGCCTTCCAGGCC...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCCTGAGGTGCTCCAGGTaGGTCAGGGCCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFLRCSR*VRAWKA
Trigger: AGCCTTCCAGGCCCTGACCCACCTGGAGCACCTCAG...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGCAGCACTCAGCGCAGTaGCCATCGCCAGCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGQHSAQ*PSPAGC
Trigger: ACAACCGGCTGGCGATGGCCACTGCGCTGAGTGCTG...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAATGTCCCGGAAGGTGTaGCGGGTGAGGCGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGAMSRKV*RVRRVR
Trigger: TCTGACTCGCCTCACCCGCCACACCTTCCGGGACAT...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTATGTCCCGGAAGGTGTaGCGGGTGAGGCGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPMSRKV*RVRRVR
Trigger: TCTGACTCGCCTCACCCGCCACACCTTCCGGGACAT...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCGCCAGGTCGGGGAAATaGAGCAGTTTGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSARSGK*SSLFSR
Trigger: GCGGGAGAACAAACTGCTCCATTTCCCCGACCTGGC...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTTCCAGATTCAAGAGCTaGGAAAGGGGGCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSSRFKS*ERGRPL
Trigger: CAGCGGCCGCCCCCTTTCCCAGCTCTTGAATCTGGA...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTGTCCAGGCGGGAAGGTaGCTCAGGCGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSVQAGR*LRRFSA
Trigger: TGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGAC...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGTCTCCAGGCCACCCATaGCACTGCCTGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LIHSGRLYKELVPRPGLRSPGHP*HCLAGG
Trigger: GCCTCCTGCCAGGCAGTGCCATGGGTGGCCTGGAGA...CCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGCCGCAGCAGCTGAGTaGATTCCCCTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSAAAAE*IPLQVE
Trigger: CTCTACCTGCAGGGGAATCCACTCAGCTGCTGCGGC...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGCGGCCCTGGTGCAGCTaGGCTGCCAGCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: EAQKGSLEPALSCDVIAERPWCS*AASQPL
Trigger: CAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCG...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCAGATCAGGTCCTGGGTaGCGTCCACGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFRSGPG*RPRPHG
Trigger: GCCGTGTGGACGTGGACGCCACCCAGGACCTGATCT...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAAGATCAGGTCCTGGGTaGCGTCCACGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSRSGPG*RPRPHG
Trigger: GCCGTGTGGACGTGGACGCCACCCAGGACCTGATCT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCACGGCAGATCAGGTCCTaGGTGGCGTCCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSRQIRS*VASTST
Trigger: TGTGGACGTGGACGCCACCCAGGACCTGATCTGCCG...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCCGAGCTCTGGAGCCCTaGGCTTTCACACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFRALEP*AFTPQA
Trigger: GGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCG...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAGAGCAGGAGACGGAATaGTCCAGTGCTGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGAEQETE*SSAGLD
Trigger: GTCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTC...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCATGGCATTAGTTAGCTaGGGCCCTGGAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAMALVS*GPGRRF
Trigger: AAATCTCCTTCCAGGGCCCCAGCTAACTAATGCCAT...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACAAGGACTGGGTCTGCCTaGGTGCTCCACACACCACCA +
Preference number: 4 (lower is better)
Translates to: RSTLFSAVPETAQLLASTRTGSA*VLHTPP
Trigger: TGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCT...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAAGTAGAAGCCCAGGGGTaGGGCCAGGATACTCCGCAG +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEVEAQG*GQDTPQ
Trigger: CTGCGGAGTATCCTGGCCTCACCCCTGGGCTTCTAC...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTGGTTGTGAGCCAGGCTaGGGTGCTCCAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWAGCEPG*GAPGGS
Trigger: TGACCCACCTGGAGCACCTCAGCCTGGCTCACAACC...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTATCGCCAGCCGGTTGTaGGCCAGGCTGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSIASRL*ARLRCS
Trigger: GGAGCACCTCAGCCTGGCTCACAACCGGCTGGCGAT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCACTGTTCTCCGCCAGTaGGAGGGTATGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFTVLRQ*EGMQAG
Trigger: CCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGT...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCCTGTGGGGAGCCGGATaGGGTTGTTGGACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPLWGAG*GCWTSS
Trigger: TGAACTTGTCCAACAACCTCATCCGGCTCCCCACAG...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGGGCTGCGGAGGGAGGTaGTGCCGGAGAAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLGCGGR*CRRRPH
Trigger: GTGTGGCCTTCTCCGGCATCACCTCCCTCCGCAGCC...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCGGAAGGCCCCTGCCCTaGGCAGCTCTATCTCATTAT +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPGRPLP*AALSHY
Trigger: ATAATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCC...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTTGCCTGGCAGGAGGCTaGAGCTGTTGTTTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPCLAGG*SCCFAG
Trigger: ACCTGCGAAACAACAGCTTCAGCCTCCTGCCAGGCA...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCCATTGCCGCAGCAGCTaGGTGGATTCCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFHCRSS*VDSPAG
Trigger: ACCTGCAGGGGAATCCACTCAGCTGCTGCGGCAATG...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAAGAAGGATGAAGGTTTaGATCTCACCTATGGCATTA +
Preference number: 4 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPRRMKV*ISPMAL
Trigger: TAATGCCATAGGTGAGATTCAAACCTTCATCCTTCT...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAATGGGGGTCATCTGGGTaGGGCTTTTTACCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDEWGSSG*GFLPVF
Trigger: AAAAACAGGTAAAAAGCCTCACCCAGATGACCCCCA...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGCCTGGCTCTGCCCATTaGCTCTCCCTTAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEPGSAH*LSLNFL
Trigger: GAGGAAGTTAAGGGAGAGTCAATGGGCAGAGCCAGG...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACCTGGGCCCTGGGAAGTaGCAGCAGCCCTGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDLGPGK*QQPCVV
Trigger: CACTACACAGGGCTGCTGTCACTTCCCAGGGCCCAG...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTCCTCTCGGCCTCAGCTaGCTTACTGGCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSPLGLS*LTGRVG
Trigger: CCCCACTCTGCCAGTAAGTCAGCTGAGGCCGAGAGG...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407242.6
CDS-3UTR GCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGTCCAGGTGACGAAGTaGTGTGTAGAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPVQVTK*CVEAQG
Trigger: CCCCTGGGCTTCTACACAGCACTTCGTCACCTGGAC...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTCTAGCACCCGCAGCTaGTGGAGGCTGAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFSSTRS*WRLKSE
Trigger: CTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCTAGA...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCACGGAAGGTGCGTGGATaGCCTTGCTGTCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPRKVRG*PCCPGV
Trigger: CACCCCAGGACAGCAAGGGCATCCACGCACCTTCCG...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTCCAGCCCTCGGAAGGTaGGTGGATGCCCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWAPALGR*VDALAV
Trigger: GACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGG...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAACTGACTCGGTTCCCCTaGAGGTTGAGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEELTRFP*RLSRCR
Trigger: CCTGCAGCGGCTCAACCTGCAGGGGAACCGAGTCAG...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCACTGACTCGGTTCCCCTaGAGGTTGAGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPLTRFP*RLSRCR
Trigger: CCTGCAGCGGCTCAACCTGCAGGGGAACCGAGTCAG...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAACAGGGCAGGTCCACCTaGAGGACCATCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEQGRST*RTISPL
Trigger: CAACGGGCTGATGGTCCTGCAGGTGGACCTGCCCTG...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTCAGCTGGACCCAAAGTaGAGCCCGGGAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSQLDPK*SPGRGS
Trigger: TGACCCCCTTCCCGGGCTGCACTTTGGGTCCAGCTG...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACAAGGAGGAGAGCGCCTaGAGCTGCCTGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDKEESA*SCLPGR
Trigger: TCTCCCAGGCAGGCAGCTGCAGGCGCTCTCCTCCTT...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGAACCAGGACTGGGTCTaGCTGGGTGCTCCACACACC +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIENQDWV*LGAPHT
Trigger: GGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTT...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGCAGGGCACTTTGTCTTaGTGTTGTGCAGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEQGTLS*CCAARP
Trigger: AGGCCTGGCTGCACAACACCAAGACAAAGTGCCCTG...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAGCAGGCCCAGAACCTaGCACGAGACCTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGASRPRT*HETFLS
Trigger: GGACAAGAAGGTCTCGTGCCAGGTTCTGGGCCTGCT...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTAGCACCGAGGGGACCTaGAGCAGGCCCAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSSTEGT*SRPRTW
Trigger: CCAGGTTCTGGGCCTGCTCCAGGTCCCCTCGGTGCT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACAAGGGTCTCAGTGTCTaGCGGGAGCACCGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDKGLSV*REHRGD
Trigger: GTCCCCTCGGTGCTCCCGCCAGACACTGAGACCCTT...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTAAGGGTCTCAGTGTCTaGCGGGAGCACCGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSKGLSV*REHRGD
Trigger: GTCCCCTCGGTGCTCCCGCCAGACACTGAGACCCTT...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGGGCCTGGAAGGCTCCTaGCTGGAGGAAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGGLEGS*LEEADL
Trigger: GAGATCAGCTTCCTCCAGCCAGGAGCCTTCCAGGCC...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAACAGCACTCAGCGCAGTaGCCATCGCCAGCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEQHSAQ*PSPAGC
Trigger: ACAACCGGCTGGCGATGGCCACTGCGCTGAGTGCTG...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTGCCAGGTCGGGGAAATaGAGCAGTTTGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPARSGK*SSLFSR
Trigger: GCGGGAGAACAAACTGCTCCATTTCCCCGACCTGGC...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGCCTCCAGCCCAGGATTaGAAGAAAGGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGPPAQD*KKGPAQ
Trigger: CTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGG...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTGTCCAGGCGGGAAGGTaGCTCAGGCGGTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSVQAGR*LRRFSA
Trigger: TGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGAC...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCGCCGCAGCAGCTGAGTaGATTCCCCTGCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFAAAAE*IPLQVE
Trigger: CTCTACCTGCAGGGGAATCCACTCAGCTGCTGCGGC...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGCGGCCCTGGTGCAGCTaGGCTGCCAGCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLRPWCS*AASQPL
Trigger: CAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCG...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCTCTCTCCTACCAGACTaGGAGATTCTTGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSSLLPD*EILEGG
Trigger: CCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGA...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGTCTCTCCTACCAGACTaGGAGATTCTTGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGSLLPD*EILEGG
Trigger: CCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGA...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGAGGACTGGGTCTGCCTaGGTGCTCCACACACCACCA +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGRTGSA*VLHTPP
Trigger: TGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAAGGACTGGGTCTGCCTaGGTGCTCCACACACCACCA +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSRTGSA*VLHTPP
Trigger: TGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACACTGTTCTCCGCCAGTaGGAGGGTATGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDTVLRQ*EGMQAG
Trigger: CCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGT...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGACAAGTTCAGGTAGATaGGTCTCGGGAGCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGTSSGR*VSGARP
Trigger: TGGCCGCGCTCCCGAGACTCATCTACCTGAACTTGT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAACAAGTTCAGGTAGATaGGTCTCGGGAGCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSTSSGR*VSGARP
Trigger: TGGCCGCGCTCCCGAGACTCATCTACCTGAACTTGT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCTGTGGGGAGCCGGATaGGGTTGTTGGACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTALWGAG*GCWTSS
Trigger: TGAACTTGTCCAACAACCTCATCCGGCTCCCCACAG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTCCTCCTCCTGGGAGCTaGAGCGGCAGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSPPPGS*SGRSGP
Trigger: AGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGG...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGCCTCCTCCTGGGAGCTaGAGCGGCAGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EAQKGSLEPALSCDVIAEPPPGS*SGRSGP
Trigger: AGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGG...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GGCCTGCCGAGCTCTGGAGCCCTGGGCTTTCACACCTCAGGCCCTAAGCACACTGAAGATTTGTTGATCTaGCAGGTCAACATTATTCTC +
Preference number: 4 (lower is better)
Translates to: GLPSSGALGFHTSGPKHTEDLLI*QVNIIL
Trigger: GAGAATAATGTTGACCTGTCAGATCAACAAATCTTC...AGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCAGCAAAACAAGGTCTTaGGTTGGTCCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSSKTRS*VGPSTS
Trigger: GGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCT...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGGTCCAGGTGACGAAGTaGTGTGTAGAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGVQVTK*CVEAQG
Trigger: CCCCTGGGCTTCTACACAGCACTTCGTCACCTGGAC...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCATCAGCACGTTGCTATaGAGGTCAAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPISTLL*RSSCSS
Trigger: GCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGAT...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTTCTAGCACCCGCAGCTaGTGGAGGCTGAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSSSTRS*WRLKSE
Trigger: CTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCTAGA...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAAGGCCTCGATGCTGTTaGAGCTCAGGTCTAGCACCC +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSRPRCC*SSGLAP
Trigger: GGGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGCACAGGGAGGTCAGGTaGTCAAGAAAGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGHREVR*SRKLSG
Trigger: CCCCGACAGCTTTCTTGAGCACCTGACCTCCCTGTG...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCACACAGGGAGGTCAGGTaGTCAAGAAAGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSHREVR*SRKLSG
Trigger: CCCCGACAGCTTTCTTGAGCACCTGACCTCCCTGTG...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCTCCCAGCATTCCCAGTaGCCAGAGCAGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPSQHSQ*PEQGVA
Trigger: TGCCACACCCTGCTCTGGGCACTGGGAATGCTGGGA...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTGTCCACTTAACGGCCTaGAGCCCCTGCAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTAVHLTA*SPCSGK
Trigger: TTTACCACTGCAGGGGCTGCAGGCCGTTAAGTGGAC...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACACAGGGCACTTTGTCTTaGTGTTGTGCAGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSTLFSAVPETAQLLASTQGTLS*CCAARP
Trigger: AGGCCTGGCTGCACAACACCAAGACAAAGTGCCCTG...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGAGCAGGCCCAGAACCTaGCACGAGACCTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGSRPRT*HETFLS
Trigger: GGACAAGAAGGTCTCGTGCCAGGTTCTGGGCCTGCT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAGCACCCGCAGCTGCTaGAGGCTGAAGTCGGAGATG +
Preference number: 4 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPSTRSC*RLKSEM
Trigger: CATCTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCT...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAATCAAGCCAGGTGAGCTaGAACTCAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEESSQVS*NSAWGW
Trigger: CCAGCCCCAGGCTGAGTTCCAGCTCACCTGGCTTGA...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACGTCTCCAGGGCATTGTaGCTTAAGTCAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: CDLESVLTLLCTSGSPTDVSRAL*LKSRSI
Trigger: GATGCTCCTTGACTTAAGCCACAATGCCCTGGAGAC...GTCAGTGGGGGAGCCTGAGGTACAGAGAAGAGTGAGGACTGACTCAAGGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGCAGGCTGGCCAGATTaGCAAAGGTGTATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIEAGWPD*QRCMGA
Trigger: TGCCCCCATACACCTTTGCCAATCTGGCCAGCCTGC...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGACAAACAGTCTGCTTaGAAATGTCTCAGACAAATC +
Preference number: 4 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGDKQSA*KCLRQI
Trigger: GATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTC...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGGAATGGTCCAGTGCTaGGCTGGACCCCTTAACCAG +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIEGMVQC*AGPLNQ
Trigger: CTGGTTAAGGGGTCCAGCCCAGCACTGGACCATTCC...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAACCTGCTCGGGCTATGTaGGGCCACTTCCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEPARAM*GHFLST
Trigger: AGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGG...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCGATCCCAACCAGGACTaGGTCTGCCTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPDPNQD*VCLGAP
Trigger: TGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATC...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CAA 72 bp CTCTGCAGCACTCTCTCCTACCAGACTGGGAGATTCTaGAGGGCGGGAATGTATCTCATTTCCCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: LCSTLSYQTGRF*RAGMYLISQHS
Trigger: GGAATGCTGGGAAATGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGAGTGCTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGCAAGCAGTTTCTGCTaGGGTTCAGGAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIEASSFC*GSGSTG
Trigger: CCCTGTGCTTCCTGAACCTCAGCAGAAACTGCTTGC...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAATGCCTGGCAGGAGGCTaGAGCTGTTGTTTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEECLAGG*SCCFAG
Trigger: ACCTGCGAAACAACAGCTTCAGCCTCCTGCCAGGCA...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCAACTGAGCCCACATCATaGGCCAGACTGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPTEPTS*ARLWAK
Trigger: CTTGGCCCACAGTCTGGCTCATGATGTGGGCTCAGT...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCACTATGCAGGTCAAGCTaGTCCAGCGCAGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPLCRSS*SSAGMS
Trigger: GGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAG...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCTGTCCATCAGCACGTTaGTATGCAGGTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPCPSAR*YAGQAA
Trigger: AGCAGCTTGACCTGCATAGCAACGTGCTGATGGACA...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGTCTGAAAGGCCTCGATaGTGTTGCAGCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGSERPR*CCSSGL
Trigger: TAGACCTGAGCTGCAACAGCATCGAGGCCTTTCAGA...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAATCAGCCCGTTGCCCTaGAGTGCCAGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RHKAWIQIHICQAGCKTEISPLP*SARTSK
Trigger: CTTGGAGGTCCTGGCACTGCAGGGCAACGGGCTGAT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAAGACGGAATGGTCCAGTaGTGGGCTGGACCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEDGMVQ*WAGPLN
Trigger: GTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTC...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGGTGCACAGCACAGGATaGTTCCAGACCCTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EAQKGSLEPALSCDVIAEVHSTG*FQTLLG
Trigger: CCCGAGCAGGGTCTGGAAGCATCCTGTGCTGTGCAC...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAAGGATACTCCGCAGCTaGTTCCCAGATAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSRILRS*FPDRSR
Trigger: CCTTGATCTATCTGGGAACCAGCTGCGGAGTATCCT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGATGTCCCGGAAGGTGTaGCGGGTGAGGCGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EAQKGSLEPALSCDVIAEMSRKV*RVRRVR
Trigger: TCTGACTCGCCTCACCCGCCACACCTTCCGGGACAT...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCAGCAGGCTGGCCAGATTaGCAAAGGTGTATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPAGWPD*QRCMGA
Trigger: TGCCCCCATACACCTTTGCCAATCTGGCCAGCCTGC...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGCCTCCAGCCCAGGATTaGAAGAAAGGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGPPAQD*KKGPAQ
Trigger: CTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGG...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTCTGGCTGGAGGAAGCTaGTCTCATTGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSLAGGS*SHWCSG
Trigger: ACCTGAGCACCAATGAGATCAGCTTCCTCCAGCCAG...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACCTGTGGGGAGCCGGATaGGGTTGTTGGACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDLWGAG*GCWTSS
Trigger: TGAACTTGTCCAACAACCTCATCCGGCTCCCCACAG...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACGCAAGCAGTTTCTGCTaGGGTTCAGGAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDASSFC*GSGSTG
Trigger: CCCTGTGCTTCCTGAACCTCAGCAGAAACTGCTTGC...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACGGAAGGCCCCTGCCCTaGGCAGCTCTATCTCATTAT +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDGRPLP*AALSHY
Trigger: ATAATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCC...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTATTCTCGGCTGTCCCTaGAACCGCCCAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSILGCP*NRPTSG
Trigger: GCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAAT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGTCAGGGTATGCAACATaGGAGTGCCAGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGSGYAT*ECQEGR
Trigger: TCTCCCTTCCTGGCACTCTCATGTTGCATACCCTGA...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAAAGAAGGATGAAGGTTTaGATCTCACCTATGGCATTA +
Preference number: 4 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDERRMKV*ISPMAL
Trigger: TAATGCCATAGGTGAGATTCAAACCTTCATCCTTCT...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATGGGGGTCATCTGGGTaGGGCTTTTTACCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSWGSSG*GFLPVF
Trigger: AAAAACAGGTAAAAAGCCTCACCCAGATGACCCCCA...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAACTGAGCCCACATCATaGGCCAGACTGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RHKAWIQIHICQAGCKTETEPTS*ARLWAK
Trigger: CTTGGCCCACAGTCTGGCTCATGATGTGGGCTCAGT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAATCAGCACGTTGCTATaGAGGTCAAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSISTLL*RSSCSS
Trigger: GCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGAT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTTGTCCATCAGCACGTTaGTATGCAGGTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTACPSAR*YAGQAA
Trigger: AGCAGCTTGACCTGCATAGCAACGTGCTGATGGACA...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTTCTGAAAGGCCTCGATaGTGTTGCAGCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTASERPR*CCSSGL
Trigger: TAGACCTGAGCTGCAACAGCATCGAGGCCTTTCAGA...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGCACAGGGAGGTCAGGTaGTCAAGAAAGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: EAQKGSLEPALSCDVIAEHREVR*SRKLSG
Trigger: CCCCGACAGCTTTCTTGAGCACCTGACCTCCCTGTG...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATGTTGGTTAAACTTCTaGCGGCGGACGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPCWLNF*RRTQQQ
Trigger: CTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACA...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAATGTTGGTTAAACTTCTaGCGGCGGACGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEECWLNF*RRTQQQ
Trigger: CTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACA...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAGGAGGAGTGTTACGTaGAGTAGCACCCGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPRRSVT*SSTRGC
Trigger: ACACCCACGGGTGCTACTGCACGTAACACTCCTCCT...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACAGGAGGAGTGTTACGTaGAGTAGCACCCGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDRRSVT*SSTRGC
Trigger: ACACCCACGGGTGCTACTGCACGTAACACTCCTCCT...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTGCAGGCTGGCCAGATTaGCAAAGGTGTATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSAGWPD*QRCMGA
Trigger: TGCCCCCATACACCTTTGCCAATCTGGCCAGCCTGC...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTTCAAAGATCAGGCGTaGGGACCCACACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWAFKDQA*GPTPWP
Trigger: AGGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGAA...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAATTCCTGGAGAGGTTaGGATGGGTCAGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLNSWRG*DGSGGA
Trigger: TGCCCCGCCTGACCCATCTCAACCTCTCCAGGAATT...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCCATTCTCAGAAGACGTaGCAAACAGTCTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPHSQKT*QTVCLE
Trigger: TTCCAAGCAGACTGTTTGTCACGTCTTCTGAGAATG...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTTCAGGGTATGCAACATaGGAGTGCCAGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSSGYAT*ECQEGR
Trigger: TCTCCCTTCCTGGCACTCTCATGTTGCATACCCTGA...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCCCTCCCCTGGAGACAGAAGGATaGAGGTTTGAATCTCACCTA +
Preference number: 4 (lower is better)
Translates to: QTVCLEMSQTNPPGLGPPLETEG*RFESHL
Trigger: TAGGTGAGATTCAAACCTTCATCCTTCTGTCTCCAG...GGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp TTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGATCAGCACGTTGCTATaGAGGTCAAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIHSGRLYKELVPRPGLRISTLL*RSSCSS
Trigger: GCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGAT...CCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR GCA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTACTGGGGTCAGGGTATaGAACATGAGAGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWATGVRV*NMRVPG
Trigger: TCCTGGCACTCTCATGTTGCATACCCTGACCCCAGT...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGTCAAACTCCAGGCTCTaGTCAATAGAGGAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYESNSRL*SIEEKG
Trigger: TCCCTTTTCCTCTATTGAGCAGAGCCTGGAGTTTGA...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAAGGAGGAGTGTTACGTaGAGTAGCACCCGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RHKAWIQIHICQAGCKTERRSVT*SSTRGC
Trigger: ACACCCACGGGTGCTACTGCACGTAACACTCCTCCT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGAGCAGCAGGATCTaGGGTCTCATGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLRSSRI*GLMALA
Trigger: AGCCAGAGCCATGAGACCCCAGATCCTGCTGCTCCT...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR CCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGCAGGCCCAGAACCTaGCACGAGACCTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLSRPRT*HETFLS
Trigger: GGACAAGAAGGTCTCGTGCCAGGTTCTGGGCCTGCT...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGAGGATACTCCGCAGCTaGTTCCCAGATAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGRILRS*FPDRSR
Trigger: CCTTGATCTATCTGGGAACCAGCTGCGGAGTATCCT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGGCCAGGTCGGGGAAATaGAGCAGTTTGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLARSGK*SSLFSR
Trigger: GCGGGAGAACAAACTGCTCCATTTCCCCGACCTGGC...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCACAGAGAAAGGTGTCCTaGGCTGTAATTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGAQRKVS*AVIWRP
Trigger: TGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTG...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTAACAAGGTCTTGAGTTaGTCCCAGCACGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SILPRQLMTPWYEGWGSSNKVLS*SQHVHS
Trigger: AGAATGGACGTGCTGGGACCAACTCAAGACCTTGTT...AGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGTTCTCCTCTGTAAAATaGGGTGGAGAGAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEFSSVK*GGESGI
Trigger: AATGCCACTCTCTCCACCCCATTTTACAGAGGAGAA...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCAGAAAGCTGTCGGGGATaGGCTCAATCTCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPESCRG*AQSHCS
Trigger: GCTACAATGAGATTGAGCTCATCCCCGACAGCTTTC...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp TTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGTTCCCAGACAGCTCATaGCTCCATGGTATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LIHSGRLYKELVPRPGLRFPDSS*LHGMRD
Trigger: ATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAA...CCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAAGCAAAACAAGGTCTTaGGTTGGTCCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: RHKAWIQIHICQAGCKTESKTRS*VGPSTS
Trigger: GGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCATCAAACTCCAGGCTCTaGTCAATAGAGGAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: IGADTRLGFKSTSAKLGASNSRL*SIEEKG
Trigger: TCCCTTTTCCTCTATTGAGCAGAGCCTGGAGTTTGA...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTGTCTCCAGGGCATTGTaGCTTAAGTCAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWAVSRAL*LKSRSI
Trigger: GATGCTCCTTGACTTAAGCCACAATGCCCTGGAGAC...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAGTAAAGATCAGGCCCTaGAGACAGAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: WGGESGIFTFSHITEPTSVKIRP*RQKDEG
Trigger: ACCTTCATCCTTCTGTCTCCAGGGCCTGATCTTTAC...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGAACAAGGTCTTGAGTTaGTCCCAGCACGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGNKVLS*SQHVHS
Trigger: AGAATGGACGTGCTGGGACCAACTCAAGACCTTGTT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
3UTR CAA 72 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTaGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLE*VPARPFFPDSS
Trigger: TGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR TCA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAAGACTGGGAGATTCTTaGGGGCGGGAATGTATCTCA +
Preference number: 4 (lower is better)
Translates to: RHKAWIQIHICQAGCKTERLGDS*GRECIS
Trigger: TGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATCCTGGGCTGTAATTTaGAGACCAGAGTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GKMMKTAKQGLELVPARPSWAVI*RPEFWD
Trigger: ATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGA...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAACAGAGAAAGGTGTCCTaGGCTGTAATTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEQRKVS*AVIWRP
Trigger: TGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTG...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGACAAACAGTCTGCTTaGAAATGTCTCAGACAAATC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEDKQSA*KCLRQI
Trigger: GATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTC...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAAGGCAGACACAAGGCTTaGATTCAAATCCACATCTGC +
Preference number: 4 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEGRHKA*IQIHIC
Trigger: GCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCC...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp GCAATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGTTCTCCTCTGTAAAATaGGGTGGAGAGAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: AMGRLDSIVSNSRLCSIEFSSVK*GGESGI
Trigger: AATGCCACTCTCTCCACCCCATTTTACAGAGGAGAA...CTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGAAGATTTGTTGATCTaGCAGGTCAACATTATTCTC +
Preference number: 4 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEEDLLI*QVNIIL
Trigger: GAGAATAATGTTGACCTGTCAGATCAACAAATCTTC...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTCTGGAGACAGAAGGATaGAGGTTTGAATCTCACCTA +
Preference number: 4 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSLETEG*RFESHL
Trigger: TAGGTGAGATTCAAACCTTCATCCTTCTGTCTCCAG...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTAACAAGGTCTTGAGTTaGTCCCAGCACGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSNKVLS*SQHVHS
Trigger: AGAATGGACGTGCTGGGACCAACTCAAGACCTTGTT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTATCTGCCAAGCTGGGTaGAAAACAGAACCAGATATC +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSICQAG*KTEPDI
Trigger: GATATCTGGTTCTGTTTTGCACCCAGCTTGGCAGAT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR GCA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTATTCAAATCCACATCTaGCAAGCTGGGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: PEALYKLSTSFILFLSLSIQIHI*QAGCKT
Trigger: TGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAAT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR TCA 90 bp AGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTCAGTGAAGATTTGTTaGTCTGACAGGTCAACATTA +
Preference number: 4 (lower is better)
Translates to: RVAFSLSRTLLSPHHEPDSVKIC*SDRSTL
Trigger: TAATGTTGACCTGTCAGATCAACAAATCTTCACTGA...GTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
3UTR CAA 72 bp AAAAGATCCTTGCATGATGAGGCACAGAAAGGAAGTTaGGAGCCAGCATTATCTTGTGATGTGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KRSLHDEAQKGS*EPALSCDVIAE
Trigger: CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTCATCATGCAAGGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS GCA 90 bp GCAGGGCAGGTCCACCTGCAGGACCATCAGCCCGTTGCCCTGCAGTaGCAGGACCTCCAAGGAGGCCTCCAGGCCTCCCAAGGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: AGQVHLQDHQPVALQ*QDLQGGLQASQGPR
Trigger: ACGGGGGCCTTGGGAGGCCTGGAGGCCTCCTTGGAGGTCCTGGCACTGCAGGGCAACGGGCTGATGGTCCTGCAGGTGGACCTGCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp GCCGCTGTACAGGCTGTTCCCAGACAGGTCCAGGGAGGTCACGCGTaGCAGGGGGCCCAGGCCACCAGCACTCAGCGCAGTGGCCATCGC +
Preference number: 5 (lower is better)
Translates to: AAVQAVPRQVQGGHA*QGAQATSTQRSGHR
Trigger: GCGATGGCCACTGCGCTGAGTGCTGGTGGCCTGGGCCCCCTGCCACGCGTGACCTCCCTGGACCTGTCTGGGAACAGCCTGTACAGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS GCA 90 bp TGGCGGGTGAGGCGAGTCAGACTGTTCTCCGCCAGTGAGAGGGTATaGAGGCTGGGTGCCTCCCCCAGCAGCCGCTCCAGCAGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: WRVRRVRLFSASERV*RLGASPSSRSSRPL
Trigger: CAGCGGCCTGCTGGAGCGGCTGCTGGGGGAGGCACCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS GCA 90 bp GTCCTGGGTGGCGTCCACGTCCACACGGCCCTGGTGCAGCTGGGCTaGCAGCCAGCCATTGCCGCAGCAGCTGAGTGGATTCCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLGGVHVHTALVQLG*QPAIAAAAEWIPLQ
Trigger: CTGCAGGGGAATCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGTGGACGCCACCCAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp CTCAGGGACACCTCCTCCTGGGAGCTGAAGCGGCAGATCAGGTCCTaGGTGGCGTCCACGTCCACACGGCCCTGGTGCAGCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LRDTSSWELKRQIRS*VASTSTRPWCSWAA
Trigger: GGCAGCCCAGCTGCACCAGGGCCGTGTGGACGTGGACGCCACCCAGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGGTGTCCCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 90 bp CCGGAAGGTGTGGCGGGTGAGGCGAGTCAGACTGTTCTCCGCCAGTaGGAGGGTATGCAGGCTGGGTGCCTCCCCCAGCAGCCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PEGVAGEASQTVLRQ*EGMQAGCLPQQPLQ
Trigger: CTGGAGCGGCTGCTGGGGGAGGCACCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCACACCTTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS TCA 90 bp AGTCCTCGGGACGCACGTGGCTCAGGGACACCTCCTCCTGGGAGCTaGAGCGGCAGATCAGGTCCTGGGTGGCGTCCACGTCCACACGGC +
Preference number: 5 (lower is better)
Translates to: SPRDARGSGTPPPGS*SGRSGPGWRPRPHG
Trigger: GCCGTGTGGACGTGGACGCCACCCAGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGGTGTCCCTGAGCCACGTGCGTCCCGAGGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp AAGCGGCAGATCAGGTCCTGGGTGGCGTCCACGTCCACACGGCCCTaGTGCAGCTGGGCTGCCAGCCAGCCATTGCCGCAGCAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: KRQIRSWVASTSTRP*CSWAASQPLPQQLS
Trigger: ACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGTGGACGCCACCCAGGACCTGATCTGCCGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACAGGTCCCGCAGGGCATaGCCCTGTAGGAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNRSRRA*PCRSSV
Trigger: GACGCTGCTCCTACAGGGCAATGCCCTGCGGGACCT...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS GCA 90 bp ATGAAGCAGGGCAGGTCCACCTGCAGGACCATCAGCCCGTTGCCCTaGAGTGCCAGGACCTCCAAGGAGGCCTCCAGGCCTCCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: MKQGRSTCRTISPLP*SARTSKEASRPPKA
Trigger: GGCCTTGGGAGGCCTGGAGGCCTCCTTGGAGGTCCTGGCACTGCAGGGCAACGGGCTGATGGTCCTGCAGGTGGACCTGCCCTGCTTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp GTGCCAGGACCTCCAAGGAGGCCTCCAGGCCTCCCAAGGCCCCCGTaGCCACCTCCAGCCCAGGATTGGAAGAAAGGTCCAGCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: VPGPPRRPPGLPRPP*PPPAQDWKKGPAQS
Trigger: TGACTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGTGGCCACGGGGGCCTTGGGAGGCCTGGAGGCCTCCTTGGAGGTCCTGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTGCAAGATTGAGCCGCTaGAGGCAGATGAAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: QDSPHQTSGACRALEPWAARLSR*RQMKQG
Trigger: GCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGC...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS TCA 90 bp GGTCAAGCTGCTCCAGCGCAGGCATGTCCCGGAAGGTGTGGCGGGTaGGGCGAGTCAGACTGTTCTCCGCCAGTGAGAGGGTATGCAGGC +
Preference number: 5 (lower is better)
Translates to: GQAAPAQACPGRCGG*GESDCSPPVRGYAG
Trigger: GCCTGCATACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCACACCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS CCA 90 bp AGGGCTGACCAGCCCTCGGAAGGTGCGTGGATGCCCTTGCTGTCCTaGGGTGGCCCTGTGGGGAGCCGGATGAGGTTGTTGGACAAGTTC +
Preference number: 5 (lower is better)
Translates to: RADQPSEGAWMPLLS*GGPVGSRMRLLDKF
Trigger: GAACTTGTCCAACAACCTCATCCGGCTCCCCACAGGGCCACCCCAGGACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGGTCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTCTGACAGGGCACTTTGTCTaGGTGTTGTGCAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GLGLPGCSTHHQGLALALTGHFV*VLCSQA
Trigger: GGCCTGGCTGCACAACACCAAGACAAAGTGCCCTGT...CAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACCGGTTCTCGGCAAGATaGAGCCGCTTGAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNRFSAR*SRLRQM
Trigger: CATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCG...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS GCA 90 bp GCGCCATCCTCGATGTCCATCAGCACGTTGCTATGCAGGTCAAGCTaGTCCAGCGCAGGCATGTCCCGGAAGGTGTGGCGGGTGAGGCGA +
Preference number: 5 (lower is better)
Translates to: APSSMSISTLLCRSS*SSAGMSRKVWRVRR
Trigger: TCGCCTCACCCGCCACACCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 90 bp GGGGCAGACCCTCGAAGGCGCCATCCTCGATGTCCATCAGCACGTTaGTATGCAGGTCAAGCTGCTCCAGCGCAGGCATGTCCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: GADPRRRHPRCPSAR*YAGQAAPAQACPGR
Trigger: CCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTTCGAGGGTCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp AGCCAGGCTGAGGTGCTCCAGGTGGGTCAGGGCCTGGAAGGCTCCTaGCTGGAGGAAGCTGATCTCATTGGTGCTCAGGTCCAGGTGACG +
Preference number: 5 (lower is better)
Translates to: SQAEVLQVGQGLEGS*LEEADLIGAQVQVT
Trigger: CGTCACCTGGACCTGAGCACCAATGAGATCAGCTTCCTCCAGCCAGGAGCCTTCCAGGCCCTGACCCACCTGGAGCACCTCAGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS-3UTR CAA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCCAGTCTCGGCACATTTaGCGCAAACCCGCCCCCGGG +
Preference number: 5 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAQSRHI*RKPAPG
Trigger: CCCGGGGGCGGGTTTGCGCAAAATGTGCCGAGACTG...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS-3UTR CAA 90 bp CCAGGACTGGGTCTGCCTGGGTGCTCCACACACCACCAGGGCCTAGCCCTGGCTGGGAAATGGAGCAGTTaGTTCTCCCGCAGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: PGLGLPGCSTHHQGLALAGKWSS*FSRRSS
Trigger: GCTTGACCTGCGGGAGAACAAACTGCTCCATTTCCC...AGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCAGGTCCCGCAGGGCATaGCCCTGTAGGAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSARSRRA*PCRSSV
Trigger: GACGCTGCTCCTACAGGGCAATGCCCTGCGGGACCT...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 90 bp GGTCGGGGAAATGGAGCAGTTTGTTCTCCCGCAGGTCAAGCCAGGTaGGCTGGAACTCAGCCTGGGGCTGGGAGGCCGTCTGAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GRGNGAVCSPAGQAR*AGTQPGAGRPSERP
Trigger: AGGCCTTTCAGACGGCCTCCCAGCCCCAGGCTGAGTTCCAGCTCACCTGGCTTGACCTGCGGGAGAACAAACTGCTCCATTTCCCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 90 bp CCCTCACACGCAGGAGCAGGGCAGACTAGCTCACAGTCTGGCCTCTaGGGTCCTCTCTCCCTCCTCTCGGCCTCAGCTGACTTACTGGCA +
Preference number: 5 (lower is better)
Translates to: PSHAGAGQTSSQSGL*GPLSLLSASADLLA
Trigger: TGCCAGTAAGTCAGCTGAGGCCGAGAGGAGGGAGAGAGGACCTCAGAGGCCAGACTGTGAGCTAGTCTGCCCTGCTCCTGCGTGTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407242.6
ENST00000421973.1
CDS CCA 90 bp CTATGCAGGTCAAGCTGCTCCAGCGCAGGCATGTCCCGGAAGGTGTaGCGGGTGAGGCGAGTCAGACTGTTCTCCGCCAGTGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: LCRSSCSSAGMSRKV*RVRRVRLFSASERV
Trigger: TACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCACACCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS CCA 90 bp GGGCATTGCCCTGTAGGAGCAGCGTCCGCAGAGACCCCAGGGCTCTaGCGCCCAGTTCCAGTGTCTCCAGGGCATTGTGGCTTAAGTCAA +
Preference number: 5 (lower is better)
Translates to: GHCPVGAASAETPGL*RPVPVSPGHCGLSQ
Trigger: TTGACTTAAGCCACAATGCCCTGGAGACACTGGAACTGGGCGCCAGAGCCCTGGGGTCTCTGCGGACGCTGCTCCTACAGGGCAATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp AGGTCCAGCACCTCCAGTGACACAGCCTGTGTCCAGGCGGGAAGGTaGCTCAGGCGGTTCTCGGCAAGATTGAGCCGCTTGAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: RSSTSSDTACVQAGR*LRRFSARLSRLRQM
Trigger: CATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGACACAGGCTGTGTCACTGGAGGTGCTGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GCTGGGCTGGACCCCTTAACCAGACCCTGCTGGAGCCGCCGTGGCCCACCTAACAGTGTCTCCAGGGCATaGTGGCTTAAGTCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: AGLDPLTRPCWSRRGPPNSVSRA*WLKSRS
Trigger: GCTCCTTGACTTAAGCCACAATGCCCTGGAGACACT...GTTAGGTGGGCCACGGCGGCTCCAGCAGGGTCTGGTTAAGGGGTCCAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAAGGAGGCTGAAGCTGTaGTTTCGCAGGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPRRLKL*FRRSST
Trigger: GGTGCTGGACCTGCGAAACAACAGCTTCAGCCTCCT...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 90 bp AGACCCTCGAAGGCGCCATCCTCGATGTCCATCAGCACGTTGCTATaGAGGTCAAGCTGCTCCAGCGCAGGCATGTCCCGGAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RPSKAPSSMSISTLL*RSSCSSAGMSRKVW
Trigger: CCACACCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTTCGAGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp GATAGATCAAGGGTCTCAGTGTCTGGCGGGAGCACCGAGGGGACCTaGAGCAGGCCCAGAACCTGGCACGAGACCTTCTTGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: DRSRVSVSGGSTEGT*SRPRTWHETFLSTI
Trigger: GATGGTGGACAAGAAGGTCTCGTGCCAGGTTCTGGGCCTGCTCCAGGTCCCCTCGGTGCTCCCGCCAGACACTGAGACCCTTGATCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS-3UTR CAA 90 bp ACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCAAGATTGAGCCGCTaGAGGCAGATGAAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: TCSSTRGCDPNQDWVCLGARLSR*RQMKQG
Trigger: GCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGC...ACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CAGGACTCACCGCACCAAACCAGCGGGGCCTGCCGAGCTCTGGAGCCCTGGGCTAACTTCCTCTGGGCCTaGGTGTTCTCCTCTGTAAAA +
Preference number: 5 (lower is better)
Translates to: QDSPHQTSGACRALEPWANFLWA*VFSSVK
Trigger: TTTTACAGAGGAGAACACCAAGGCCCAGAGGAAGTT...AGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCGGTGAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS CCA 90 bp GGCCACCTCCAGCCCAGGATTGGAAGAAAGGTCCAGCTCAGTCAGTaGGGTGTGGAGGAAGGCCCCTGCCCTGAGCAGCTCTATCTCATT +
Preference number: 5 (lower is better)
Translates to: GHLQPRIGRKVQLSQ*GVEEGPCPEQLYLI
Trigger: AATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCACACCCCACTGACTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CGGCCTGCAGCCCCTGCAGTGGTAAAGATCAGGCCCTGGAGACAGAAGGATGAAAAGGCCTCGATGCTGTaGCAGCTCAGGTCTAGCACC +
Preference number: 5 (lower is better)
Translates to: RPAAPAVVKIRPWRQKDEKASML*QLRSST
Trigger: GGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCTT...TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGAGGTCCCGCAGGGCATaGCCCTGTAGGAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGRSRRA*PCRSSV
Trigger: GACGCTGCTCCTACAGGGCAATGCCCTGCGGGACCT...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCACCTCCAGCCCAGGATaGGAAGAAAGGTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSATSSPG*EERSSS
Trigger: TGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGT...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCATCTGGGGCTGCCAGCCAGCCATaGCCGCAGCAGCTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: ILPRQLMTPWYEGWGSSGAASQP*PQQLSG
Trigger: TCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGC...CCCAGATGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CAGACCCTGCTCGGGCTATGTGGGGCCACTTCCTGTCCACTTAACGGCCTGCAGGTCCTGGGCTGTAATTaGGAGACCAGAGTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: QTLLGLCGATSCPLNGLQVLGCN*ETRVLG
Trigger: TCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGAC...CTGCAGGCCGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp CCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCTGGGTGCTCCACACACCAAAACAAGGTCTTGAGTaGGTCCCAGCACGTCCATTC +
Preference number: 5 (lower is better)
Translates to: PVGVIPTRTGSAWVLHTPKQGLE*VPARPF
Trigger: GAATGGACGTGCTGGGACCAACTCAAGACCTTGTTT...TGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACACCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAGTGGGGACCCACACCTaGGCCTCCAGGCCTAAGGAG +
Preference number: 5 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSVGTHT*ASRPKE
Trigger: CTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCAC...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 90 bp TCCAGCCCAGGATTGGAAGAAAGGTCCAGCTCAGTCAGTGGGGTGTaGAGGAAGGCCCCTGCCCTGAGCAGCTCTATCTCATTATCCACC +
Preference number: 5 (lower is better)
Translates to: SSPGLEERSSSVSGV*RKAPALSSSISLST
Trigger: GGTGGATAATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCACACCCCACTGACTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTGCTGCCAGCCAGCCATaGCCGCAGCAGCTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTAAASQP*PQQLSG
Trigger: TCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGC...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGAATTCCTGGAGAGGTaGAGATGGGTCAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEEFLER*RWVRRG
Trigger: GCCCCGCCTGACCCATCTCAACCTCTCCAGGAATTC...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTCAGTCTCGGCACATTTaGCGCAAACCCGCCCCCGGG +
Preference number: 5 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSQSRHI*RKPAPG
Trigger: CCCGGGGGCGGGTTTGCGCAAAATGTGCCGAGACTG...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260061.9
CDS-3UTR CAA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAACAGGGCACTTTGTCTaGGTGTTGTGCAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSTGHFV*VLCSQA
Trigger: GGCCTGGCTGCACAACACCAAGACAAAGTGCCCTGT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAAAGGCCTCGATGCTGTaGCAGCTCAGGTCTAGCACC +
Preference number: 5 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSKASML*QLRSST
Trigger: GGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCTT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAAGGAGGCTGAAGCTGTaGTTTCGCAGGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSRRLKL*FRRSST
Trigger: GGTGCTGGACCTGCGAAACAACAGCTTCAGCCTCCT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ATGGGGAGGTTGGATTCCATAGTCTCAAACTCCAGGCTCTGCTCAATAGAGGAAGTGGGGACCCACACCTaGGCCTCCAGGCCTAAGGAG +
Preference number: 5 (lower is better)
Translates to: MGRLDSIVSNSRLCSIEEVGTHT*ASRPKE
Trigger: CTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCAC...TTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACAACAGGGCACTTTGTCTaGGTGTTGTGCAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RSTLFSAVPETAQLLASTTGHFV*VLCSQA
Trigger: GGCCTGGCTGCACAACACCAAGACAAAGTGCCCTGT...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCTGGCACGAGACCTTCTaGTCCACCATCTTACAGGGC +
Preference number: 5 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSWHETF*STILQG
Trigger: GCCCTGTAAGATGGTGGACAAGAAGGTCTCGTGCCA...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGTGGCACGAGACCTTCTaGTCCACCATCTTACAGGGC +
Preference number: 5 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEWHETF*STILQG
Trigger: GCCCTGTAAGATGGTGGACAAGAAGGTCTCGTGCCA...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ATAGGGGCAGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAGCAAGATTGAGCCGCTaGAGGCAGATGAAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: IGADTRLGFKSTSAKLGAARLSR*RQMKQG
Trigger: GCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGC...TGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCTGCCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTCGGTTCTCGGCAAGATaGAGCCGCTTGAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPRFSAR*SRLRQM
Trigger: CATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCG...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGGTGGGGACCCACACCTaGGCCTCCAGGCCTAAGGAG +
Preference number: 5 (lower is better)
Translates to: EAQKGSLEPALSCDVIAEVGTHT*ASRPKE
Trigger: CTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCAC...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS CCA 90 bp CGGCAGAGAAAGGTGTCCTGGGCTGTAATTTGGAGACCAGAGTTCTaGGATCCCGGATCACTGTGTGACCTTGAGTCAGTCCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: RQRKVSWAVIWRPEF*DPGSLCDLESVLTL
Trigger: AAGAGTGAGGACTGACTCAAGGTCACACAGTGATCCGGGATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCGAATTCCTGGAGAGGTaGAGATGGGTCAGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPEFLER*RWVRRG
Trigger: GCCCCGCCTGACCCATCTCAACCTCTCCAGGAATTC...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGGCTGCCAGCCAGCCATaGCCGCAGCAGCTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLAASQP*PQQLSG
Trigger: TCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGC...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAGTCCTGGGCTGTAATTaGGAGACCAGAGTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSVLGCN*ETRVLG
Trigger: TCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGAC...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp GTGTTACGTGCAGTAGCACCCGTGGGTGTGATCCCAACCAGGACTGGGTCTGCCCAGAAGGATGAAGGTTaGAATCTCACCTATGGCATT +
Preference number: 5 (lower is better)
Translates to: VLRAVAPVGVIPTRTGSAQKDEG*NLTYGI
Trigger: AATGCCATAGGTGAGATTCAAACCTTCATCCTTCTG...GGCAGACCCAGTCCTGGTTGGGATCACACCCACGGGTGCTACTGCACGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp AAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCCAGCAAAACAAGGTCTaGAGTTGGTCCCAGCACGTC +
Preference number: 5 (lower is better)
Translates to: KVLSWSQHVHSSQTAHDSQQNKV*SWSQHV
Trigger: GACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG...GGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGGATGGGGGTCAATCTTACAGGGCACTTaGTCTTGGTGTTGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: TSILPRQLMTPWYEGWGSILQGT*SWCCAA
Trigger: GGCTGCACAACACCAAGACAAAGTGCCCTGTAAGAT...TGACCCCCATCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGGGGAAATGGAGCAGTTaGTTCTCCCGCAGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGGKWSS*FSRRSS
Trigger: GCTTGACCTGCGGGAGAACAAACTGCTCCATTTCCC...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAGGAGGCTGAAGCTGTaGTTTCGCAGGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPRRLKL*FRRSST
Trigger: GGTGCTGGACCTGCGAAACAACAGCTTCAGCCTCCT...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTATCTTACAGGGCACTTaGTCTTGGTGTTGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPILQGT*SWCCAA
Trigger: GGCTGCACAACACCAAGACAAAGTGCCCTGTAAGAT...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTTGGCACGAGACCTTCTaGTCCACCATCTTACAGGGC +
Preference number: 5 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWAWHETF*STILQG
Trigger: GCCCTGTAAGATGGTGGACAAGAAGGTCTCGTGCCA...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp GCATTTTCACTTTCTCGCACATTACTGAGCCCACATCATGAGCCAGACTGTGGGATGTCCATCAGCACGTaGCTATGCAGGTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: AFSLSRTLLSPHHEPDCGMSIST*LCRSSC
Trigger: GCAGCTTGACCTGCATAGCAACGTGCTGATGGACAT...CCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTGGGAAATGGAGCAGTTaGTTCTCCCGCAGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWAGKWSS*FSRRSS
Trigger: GCTTGACCTGCGGGAGAACAAACTGCTCCATTTCCC...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAAGTGTCTCCAGGGCATaGTGGCTTAAGTCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: WGGESGIFTFSHITEPTSSVSRA*WLKSRS
Trigger: GCTCCTTGACTTAAGCCACAATGCCCTGGAGACACT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTAAACAAGGTCTTGAGTaGGTCCCAGCACGTCCATTC +
Preference number: 5 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPKQGLE*VPARPF
Trigger: GAATGGACGTGCTGGGACCAACTCAAGACCTTGTTT...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTATGTCCATCAGCACGTaGCTATGCAGGTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSMSIST*LCRSSC
Trigger: GCAGCTTGACCTGCATAGCAACGTGCTGATGGACAT...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAAGGCCTCGATGCTGTaGCAGCTCAGGTCTAGCACC +
Preference number: 5 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLKASML*QLRSST
Trigger: GGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCTT...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GAAGACGTGACAAACAGTCTGCTTGGAAATGTCTCAGACAAATCCTCCTGGGCTAGTGTCTCCAGGGCATaGTGGCTTAAGTCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: EDVTNSLLGNVSDKSSWASVSRA*WLKSRS
Trigger: GCTCCTTGACTTAAGCCACAATGCCCTGGAGACACT...AGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp CCAGAGGCTCTGTATAAGCTCTCCACAAGTTTCATTCTCTTCCTAAGCCTCAGTACCTCCAGCCCAGGATaGGAAGAAAGGTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PEALYKLSTSFILFLSLSTSSPG*EERSSS
Trigger: TGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGT...ACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGCGGTTCTCGGCAAGATaGAGCCGCTTGAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLRFSAR*SRLRQM
Trigger: CATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCG...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCATGACTCCATGGTATGAGGCACAGAAAGGAAGTTaGGAGCCAGCATTATCTTGT +
Preference number: 5 (lower is better)
Translates to: VGPSTSILPRQLMTPWYEAQKGS*EPALSC
Trigger: ACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGC...CTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp TGGGGTGGAGAGAGTGGCATTTTCACTTTCTCGCACATTACTGAGCCCACATCAAAACAAGGTCTTGAGTaGGTCCCAGCACGTCCATTC +
Preference number: 5 (lower is better)
Translates to: WGGESGIFTFSHITEPTSKQGLE*VPARPF
Trigger: GAATGGACGTGCTGGGACCAACTCAAGACCTTGTTT...TGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp AGATTTGTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCCAGCAAAACAAGGTCTaGAGTTGGTCCCAGCACGTC +
Preference number: 5 (lower is better)
Translates to: RFVDLTGQHYSRLSLKPPQQNKV*SWSQHV
Trigger: GACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG...GGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAACAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTAACTTCCTCTGGGCCTaGGTGTTCTCCTCTGTAAAA +
Preference number: 5 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTANFLWA*VFSSVK
Trigger: TTTTACAGAGGAGAACACCAAGGCCCAGAGGAAGTT...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTATCTTACAGGGCACTTaGTCTTGGTGTTGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSILQGT*SWCCAA
Trigger: GGCTGCACAACACCAAGACAAAGTGCCCTGTAAGAT...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp AGACACAAGGCTTGGATTCAAATCCACATCTGCCAAGCTGGGTGCAAAACAGAAATGTCCATCAGCACGTaGCTATGCAGGTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHKAWIQIHICQAGCKTEMSIST*LCRSSC
Trigger: GCAGCTTGACCTGCATAGCAACGTGCTGATGGACAT...TTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTTGAATCCAAGCCTTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp TTTTTAATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGACCTCCAGCCCAGGATaGGAAGAAAGGTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: FLIHSGRLYKELVPRPGLTSSPG*EERSSS
Trigger: TGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGT...CAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp AGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCTGGCTTCCACATTAGGCTTTATACTGTaGGTTAAACTTCTGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RSTLFSAVPETAQLLASTLGFIL*VKLLPA
Trigger: CGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAA...TGTGGAAGCCAGAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp ATACATTCAGGTAGGTTATACAAAGAGTTGGTCCCGAGGCCTGGGCTGAGGCCTTTAGGCTTTATACTGTaGGTTAAACTTCTGCCGGCG +
Preference number: 5 (lower is better)
Translates to: IHSGRLYKELVPRPGLRPLGFIL*VKLLPA
Trigger: CGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAA...AGGCCTCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp GAGGCACAGAAAGGAAGTTTGGAGCCAGCATTATCTTGTGATGTGATAGCTGAGCAGCAAAACAAGGTCTaGAGTTGGTCCCAGCACGTC +
Preference number: 5 (lower is better)
Translates to: EAQKGSLEPALSCDVIAEQQNKV*SWSQHV
Trigger: GACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG...CTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp CAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCATTCTTCCCAGACAGCTCAGAAGGATGAAGGTTaGAATCTCACCTATGGCATT +
Preference number: 5 (lower is better)
Translates to: QQNKVLSWSQHVHSSQTAQKDEG*NLTYGI
Trigger: AATGCCATAGGTGAGATTCAAACCTTCATCCTTCTG...AGCTGTCTGGGAAGAATGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp GTTGATCTGACAGGTCAACATTATTCTCGGCTGTCCCTGAAACCGCCCAACTTCGCACAGAAAGGAAGTTaGGAGCCAGCATTATCTTGT +
Preference number: 5 (lower is better)
Translates to: VDLTGQHYSRLSLKPPNFAQKGS*EPALSC
Trigger: ACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGC...GAAGTTGGGCGGTTTCAGGGACAGCCGAGAATAATGTTGACCTGTCAGATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS-3UTR CAA 90 bp GGTAAGATGATGAAGACAGCAAAACAAGGTCTTGAGTTGGTCCCAGCACGTCCAAACTTCCTCTGGGCCTaGGTGTTCTCCTCTGTAAAA +
Preference number: 5 (lower is better)
Translates to: GKMMKTAKQGLELVPARPNFLWA*VFSSVK
Trigger: TTTTACAGAGGAGAACACCAAGGCCCAGAGGAAGTT...TGGACGTGCTGGGACCAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS-3UTR CAA 90 bp CACCTAACAACACCAGATCCGAGACACACTCGTACAGCTCCAATTCTCTCTTCTTTAGGCTTTATACTGTaGGTTAAACTTCTGCCGGCG +
Preference number: 5 (lower is better)
Translates to: HLTTPDPRHTRTAPILSSLGFIL*VKLLPA
Trigger: CGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAA...AGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTCGGATCTGGTGTTGTTAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS CAA 72 bp GGCCGCAGCTCCTCTCCCGGGCAGTCTCGGCACATTTaGCGCAAACCCGCCCCCGGGTCCCACCCCGCGCCA +
Preference number: 6 (lower is better)
Translates to: GRSSSPGQSRHI*RKPAPGSHPAP
Trigger: TGGCGCGGGGTGGGACCCGGGGGCGGGTTTGCGCAAAATGTGCCGAGACTGCCCGGGAGAGGAGCTGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000404995.5
CDS CCA 72 bp GAGAGGGGCAGGGCTGACCAGCCCTCGGAAGGTGCGTaGATGCCCTTGCTGTCCTGGGGTGGCCCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: ERGRADQPSEGA*MPLLSWGGPVG
Trigger: CCCCACAGGGCCACCCCAGGACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGGTCAGCCCTGCCCCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 72 bp GCAGCTGGGCTGCCAGCCAGCCATTGCCGCAGCAGCTaGGTGGATTCCCCTGCAGGTAGAGGCGCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: AAGLPASHCRSS*VDSPAGRGAGG
Trigger: GCCTCCGGCGCCTCTACCTGCAGGGGAATCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGCCCAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 72 bp CAGGCTGTTCCCAGACAGGTCCAGGGAGGTCACGCGTaGCAGGGGGCCCAGGCCACCAGCACTCAGCGCAGT +
Preference number: 6 (lower is better)
Translates to: QAVPRQVQGGHA*QGAQATSTQRS
Trigger: ACTGCGCTGAGTGCTGGTGGCCTGGGCCCCCTGCCACGCGTGACCTCCCTGGACCTGTCTGGGAACAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS CCA 72 bp ATCAGGTCCTGGGTGGCGTCCACGTCCACACGGCCCTaGTGCAGCTGGGCTGCCAGCCAGCCATTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: IRSWVASTSTRP*CSWAASQPLPQ
Trigger: CTGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGTGGACGCCACCCAGGACCTGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp AGGGCTGACCAGCCCTCGGAAGGTGCGTGGATGCCCTaGCTGTCCTGGGGTGGCCCTGTGGGGAGCCGGATG +
Preference number: 6 (lower is better)
Translates to: RADQPSEGAWMP*LSWGGPVGSRM
Trigger: CATCCGGCTCCCCACAGGGCCACCCCAGGACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGGTCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp GGCAGGTCCACCTGCAGGACCATCAGCCCGTTGCCCTaGAGTGCCAGGACCTCCAAGGAGGCCTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: GRSTCRTISPLP*SARTSKEASRP
Trigger: AGGCCTGGAGGCCTCCTTGGAGGTCCTGGCACTGCAGGGCAACGGGCTGATGGTCCTGCAGGTGGACCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp GGCGTCCACGTCCACACGGCCCTGGTGCAGCTGGGCTaGCAGCCAGCCATTGCCGCAGCAGCTGAGTGGATT +
Preference number: 6 (lower is better)
Translates to: GVHVHTALVQLG*QPAIAAAAEWI
Trigger: AATCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGTGGACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 72 bp ACCTCCTCCTGGGAGCTGAAGCGGCAGATCAGGTCCTaGGTGGCGTCCACGTCCACACGGCCCTGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: TSSWELKRQIRS*VASTSTRPWCS
Trigger: GCTGCACCAGGGCCGTGTGGACGTGGACGCCACCCAGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 72 bp GTGGCGGGTGAGGCGAGTCAGACTGTTCTCCGCCAGTaGGAGGGTATGCAGGCTGGGTGCCTCCCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: VAGEASQTVLRQ*EGMQAGCLPQQ
Trigger: CTGCTGGGGGAGGCACCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS TCA 72 bp GCTCCAGCGCAGGCATGTCCCGGAAGGTGTGGCGGGTaGGGCGAGTCAGACTGTTCTCCGCCAGTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: APAQACPGRCGG*GESDCSPPVRG
Trigger: CCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCACACCTTCCGGGACATGCCTGCGCTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS GCA 72 bp AGGCGAGTCAGACTGTTCTCCGCCAGTGAGAGGGTATaGAGGCTGGGTGCCTCCCCCAGCAGCCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RRVRLFSASERV*RLGASPSSRSS
Trigger: GCTGGAGCGGCTGCTGGGGGAGGCACCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS GCA 72 bp GGGGCTGGGAGGCCGTCTGAAAGGCCTCGATGCTGTTaGAGCTCAGGTCTAGCACCCGCAGCTGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: GAGRPSERPRCC*SSGLAPAAAGG
Trigger: GCCTCCAGCAGCTGCGGGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCTTTCAGACGGCCTCCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 72 bp CAGCCCTCGGAAGGTGCGTGGATGCCCTTGCTGTCCTaGGGTGGCCCTGTGGGGAGCCGGATGAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: QPSEGAWMPLLS*GGPVGSRMRLL
Trigger: CAACAACCTCATCCGGCTCCCCACAGGGCCACCCCAGGACAGCAAGGGCATCCACGCACCTTCCGAGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp CAGCCTGGGGCTGGGAGGCCGTCTGAAAGGCCTCGATaGTGTTGCAGCTCAGGTCTAGCACCCGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: QPGAGRPSERPR*CCSSGLAPAAA
Trigger: AGCAGCTGCGGGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCTTTCAGACGGCCTCCCAGCCCCAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 90 bp GCCTGTGTCCAGGCGGGAAGGTGGCTCAGGCGGTTCTCGGCAAGATaGAGCCGCTTGAGGCAGATGAAGCAGGGCAGGTCCACCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ACVQAGRWLRRFSAR*SRLRQMKQGRSTCR
Trigger: CCTGCAGGTGGACCTGCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGACACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 72 bp CCTCTGAGGTCCTCTCTCCCTCCTCTCGGCCTCAGCTaGCTTACTGGCAGAGTGGGGTCCTGGGAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PLRSSLPPLGLS*LTGRVGSWESC
Trigger: GCAGCTCTCCCAGGACCCCACTCTGCCAGTAAGTCAGCTGAGGCCGAGAGGAGGGAGAGAGGACCTCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407242.6
ENST00000421973.1
CDS TCA 72 bp GCAGGAGCAGGGCAGACTAGCTCACAGTCTGGCCTCTaGGGTCCTCTCTCCCTCCTCTCGGCCTCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: AGAGQTSSQSGL*GPLSLLSASAD
Trigger: GTCAGCTGAGGCCGAGAGGAGGGAGAGAGGACCTCAGAGGCCAGACTGTGAGCTAGTCTGCCCTGCTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407242.6
ENST00000421973.1
CDS CCA 72 bp TCAAGCTGCTCCAGCGCAGGCATGTCCCGGAAGGTGTaGCGGGTGAGGCGAGTCAGACTGTTCTCCGCCAGT +
Preference number: 6 (lower is better)
Translates to: SSCSSAGMSRKV*RVRRVRLFSAS
Trigger: ACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCACACCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS CCA 72 bp CTCCCAAGGCCCCCGTGGCCACCTCCAGCCCAGGATTaGAAGAAAGGTCCAGCTCAGTCAGTGGGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: LPRPPWPPPAQD*KKGPAQSVGCG
Trigger: TCCACACCCCACTGACTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGTGGCCACGGGGGCCTTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp CTCGGGAGCGCGGCCAGGTCGGGGAAATGGAGCAGTTaGTTCTCCCGCAGGTCAAGCCAGGTGAGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LGSAARSGKWSS*FSRRSSQVSWN
Trigger: GTTCCAGCTCACCTGGCTTGACCTGCGGGAGAACAAACTGCTCCATTTCCCCGACCTGGCCGCGCTCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp CAGGCGGGAAGGTGGCTCAGGCGGTTCTCGGCAAGATaGAGCCGCTTGAGGCAGATGAAGCAGGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: QAGRWLRRFSAR*SRLRQMKQGRS
Trigger: GGACCTGCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCGCCTGAGCCACCTTCCCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 90 bp CGGGGCAGACCCTCGAAGGCGCCATCCTCGATGTCCATCAGCACGTaGCTATGCAGGTCAAGCTGCTCCAGCGCAGGCATGTCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: RGRPSKAPSSMSIST*LCRSSCSSAGMSRK
Trigger: CTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTTCGAGGGTCTGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 90 bp CAGGCGGGAAGGTGGCTCAGGCGGTTCTCGGCAAGATTGAGCCGCTaGAGGCAGATGAAGCAGGGCAGGTCCACCTGCAGGACCATCAGC +
Preference number: 6 (lower is better)
Translates to: QAGRWLRRFSARLSR*RQMKQGRSTCRTIS
Trigger: GCTGATGGTCCTGCAGGTGGACCTGCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCGCCTGAGCCACCTTCCCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 90 bp GTCTCCAGGCCACCCATGGCACTGCCTGGCAGGAGGCTGAAGCTGTaGTTTCGCAGGTCCAGCACCTCCAGTGACACAGCCTGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: VSRPPMALPGRRLKL*FRRSSTSSDTACVQ
Trigger: CTGGACACAGGCTGTGTCACTGGAGGTGCTGGACCTGCGAAACAACAGCTTCAGCCTCCTGCCAGGCAGTGCCATGGGTGGCCTGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 72 bp GTGAGCTGGAACTCAGCCTGGGGCTGGGAGGCCGTCTaGAAGGCCTCGATGCTGTTGCAGCTCAGGTCTAGC +
Preference number: 6 (lower is better)
Translates to: VSWNSAWGWEAV*KASMLLQLRSS
Trigger: GCTAGACCTGAGCTGCAACAGCATCGAGGCCTTTCAGACGGCCTCCCAGCCCCAGGCTGAGTTCCAGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CCA 72 bp GAGGTGCTCCAGGTGGGTCAGGGCCTGGAAGGCTCCTaGCTGGAGGAAGCTGATCTCATTGGTGCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: EVLQVGQGLEGS*LEEADLIGAQV
Trigger: GACCTGAGCACCAATGAGATCAGCTTCCTCCAGCCAGGAGCCTTCCAGGCCCTGACCCACCTGGAGCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS CCA 72 bp ACCTCCAGTGACACAGCCTGTGTCCAGGCGGGAAGGTaGCTCAGGCGGTTCTCGGCAAGATTGAGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: TSSDTACVQAGR*LRRFSARLSRL
Trigger: CAAGCGGCTCAATCTTGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGACACAGGCTGTGTCACTGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 72 bp GCTCAGTCAGTGGGGTGTGGAGGAAGGCCCCTGCCCTaGGCAGCTCTATCTCATTATCCACCAGGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: AQSVGCGGRPLP*AALSHYPPGSG
Trigger: GCCTGAGCCTGGTGGATAATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCACACCCCACTGACTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp TCGATGTCCATCAGCACGTTGCTATGCAGGTCAAGCTaGTCCAGCGCAGGCATGTCCCGGAAGGTGTGGCGG +
Preference number: 6 (lower is better)
Translates to: SMSISTLLCRSS*SSAGMSRKVWR
Trigger: CCGCCACACCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp AAGGCGCCATCCTCGATGTCCATCAGCACGTTGCTATaGAGGTCAAGCTGCTCCAGCGCAGGCATGTCCCGG +
Preference number: 6 (lower is better)
Translates to: KAPSSMSISTLL*RSSCSSAGMSR
Trigger: CCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp CCCTCGAAGGCGCCATCCTCGATGTCCATCAGCACGTaGCTATGCAGGTCAAGCTGCTCCAGCGCAGGCATG +
Preference number: 6 (lower is better)
Translates to: PSKAPSSMSIST*LCRSSCSSAGM
Trigger: CATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTTCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp AGGGCTCTGGCGCCCAGTTCCAGTGTCTCCAGGGCATaGTGGCTTAAGTCAAGGAGCATCAGGCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RALAPSSSVSRA*WLKSRSIRQGR
Trigger: CCTGCCCTGCCTGATGCTCCTTGACTTAAGCCACAATGCCCTGGAGACACTGGAACTGGGCGCCAGAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS TCA 72 bp AGCGCCGGGCCTCAAAGGTCCGCAAGCAGTTTCTGCTaGGGTTCAGGAAGCACAGGGAGGTCAGGTGCTCAA +
Preference number: 6 (lower is better)
Translates to: SAGPQRSASSFC*GSGSTGRSGAQ
Trigger: TTGAGCACCTGACCTCCCTGTGCTTCCTGAACCTCAGCAGAAACTGCTTGCGGACCTTTGAGGCCCGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp CCTCGAAGGCGCCATCCTCGATGTCCATCAGCACGTTaGTATGCAGGTCAAGCTGCTCCAGCGCAGGCATGT +
Preference number: 6 (lower is better)
Translates to: PRRRHPRCPSAR*YAGQAAPAQAC
Trigger: ACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTTCGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS GCA 72 bp TCGATGCTGTTGCAGCTCAGGTCTAGCACCCGCAGCTaGTGGAGGCTGAAGTCGGAGATGCAGGTGAGGGAA +
Preference number: 6 (lower is better)
Translates to: SMLLQLRSSTRS*WRLKSEMQVRE
Trigger: TTCCCTCACCTGCATCTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCTAGACCTGAGCTGCAACAGCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 90 bp CCCACTGACCTAGAGTGTCTCCCGGCTTCTTTAGGCTTTATACTGTaGGTTAAACTTCTGCCGGCGGACGCAGCAGCAGGCGGCCAGCGT +
Preference number: 6 (lower is better)
Translates to: PTDLECLPASLGFIL*VKLLPADAAAGGQR
Trigger: ACGCTGGCCGCCTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAAAGAAGCCGGGAGACACTCTAGGTCAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260061.9
ENST00000407242.6
CDS GCA 72 bp CCACTATACCAAATCAAGGTCTCCTTCCCTAAGCCCTaGCAACGACCCCTCACACGCAGGAGCAGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: PLYQIKVSFPKP*QRPLTRRSRAD
Trigger: GTCTGCCCTGCTCCTGCGTGTGAGGGGTCGTTGGCAGGGCTTAGGGAAGGAGACCTTGATTTGGTATAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407242.6
ENST00000421973.1
CDS CCA 72 bp ATGCTGTTGCAGCTCAGGTCTAGCACCCGCAGCTGCTaGAGGCTGAAGTCGGAGATGCAGGTGAGGGAATTC +
Preference number: 6 (lower is better)
Translates to: MLLQLRSSTRSC*RLKSEMQVREF
Trigger: GAATTCCCTCACCTGCATCTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCTAGACCTGAGCTGCAACAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp CACGAGACCTTCTTGTCCACCATCTTACAGGGCACTTaGTCTTGGTGTTGTGCAGCCAGGCCTAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: HETFLSTILQGT*SWCCAARPRVS
Trigger: GCTGACCCTAGGCCTGGCTGCACAACACCAAGACAAAGTGCCCTGTAAGATGGTGGACAAGAAGGTCTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
ENST00000421973.1
CDS CAA 90 bp GCTTTTTACCTAGAGTGTCTCCCGGCTTCTTTAGGCTTTATACTGTaGGTTAAACTTCTGCCGGCGGACGCAGCAGCAGGCGGCCAGCGT +
Preference number: 6 (lower is better)
Translates to: AFYLECLPASLGFIL*VKLLPADAAAGGQR
Trigger: ACGCTGGCCGCCTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAAAGAAGCCGGGAGACACTCTAGGTAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404995.5
CDS CAA 72 bp CTAGAGTGTCTCCCGGCTTCTTTAGGCTTTATACTGTaGGTTAAACTTCTGCCGGCGGACGCAGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: LECLPASLGFIL*VKLLPADAAAG
Trigger: GCCTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAAAGAAGCCGGGAGACACTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6
CDS CAA 72 bp ATCTGGGTGAGGCTTTTTACCATCTTACAGGGCACTTaGTCTTGGTGTTGTGCAGCCAGGCCTAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: IWVRLFTILQGT*SWCCAARPRVS
Trigger: GCTGACCCTAGGCCTGGCTGCACAACACCAAGACAAAGTGCCCTGTAAGATGGTAAAAAGCCTCACCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464145.1
CDS TCA 72 bp ACAGGGAGGTCAGGTGCTCAAGAAAGCTGTCGGGGATaGGCTCAATCTCATTGTAGCTCAAATCCAGATTCA +
Preference number: 6 (lower is better)
Translates to: TGRSGAQESCRG*AQSHCSSNPDS
Trigger: TGAATCTGGATTTGAGCTACAATGAGATTGAGCTCATCCCCGACAGCTTTCTTGAGCACCTGACCTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260061.9
ENST00000404995.5
ENST00000407242.6