Pregenerated sensors for LRRC3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000229356Ensembl transcript IDs: ENST00000426578.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGTTTGGGTGTGCCCAGGATGTTCTCACGATCGGAATGCGGAGATaGATTTTTGGCAGGAATATCGCAGAAGTGACGTCCTTCTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: QFGCAQDVLTIGMRR*IFGRNIAEVTSFSG Trigger: ACCTGAGAAGGACGTCACTTCTGCGATATTCCTGCCAAAAATGCATCTCCGCATTCCGATCGTGAGAACATCCTGGGCACACCCAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CCA 90 bp | TCCATGAGCTTTTTGCCTTTGAGTGCACTGACCAGTCACTTTGTATaGTGTCTCTCAGTTTGGGTGTGCCCAGGATGTTCTCACGATCGG | + |
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Preference number: 5 (lower is better) Translates to: SMSFLPLSALTSHFV*CLSVWVCPGCSHDR Trigger: CCGATCGTGAGAACATCCTGGGCACACCCAAACTGAGAGACACCATACAAAGTGACTGGTCAGTGCACTCAAAGGCAAAAAGCTCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CCA 72 bp | CCCCGCTGTGGGGATCTTACAGTGTGCCTGACCGGCTaGCACAGGAGAAGCCGGGACAGGAGAAGCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PRCGDLTVCLTG*HRRSRDRRSRR Trigger: CCTCCGGCTTCTCCTGTCCCGGCTTCTCCTGTGCCAGCCGGTCAGGCACACTGTAAGATCCCCACAGCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS GCA 72 bp | TGGACCGCTGCCCTCACTCAGCTTCTACAGTTTCTCTaGTCGTGTTCTTTGTCCCTTCCAGGATTCCACGCT | + |
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Preference number: 6 (lower is better) Translates to: WTAALTQLLQFL*SCSLSLPGFHA Trigger: AGCGTGGAATCCTGGAAGGGACAAAGAACACGAGCAGAGAAACTGTAGAAGCTGAGTGAGGGCAGCGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS GCA 72 bp | AGTTTGGGTGTGCCCAGGATGTTCTCACGATCGGAATaGGGAGATGCATTTTTGGCAGGAATATCGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLGVPRMFSRSE*GDAFLAGISQK Trigger: CTTCTGCGATATTCCTGCCAAAAATGCATCTCCGCATTCCGATCGTGAGAACATCCTGGGCACACCCAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CCA 72 bp | GGATGTTCTCACGATCGGAATGCGGAGATGCATTTTTaGCAGGAATATCGCAGAAGTGACGTCCTTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GCSHDRNAEMHF*QEYRRSDVLLR Trigger: CCTGAGAAGGACGTCACTTCTGCGATATTCCTGCCAAAAATGCATCTCCGCATTCCGATCGTGAGAACATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CCA 72 bp | TTTTTGCCTTTGAGTGCACTGACCAGTCACTTTGTATaGTGTCTCTCAGTTTGGGTGTGCCCAGGATGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FLPLSALTSHFV*CLSVWVCPGCS Trigger: AGAACATCCTGGGCACACCCAAACTGAGAGACACCATACAAAGTGACTGGTCAGTGCACTCAAAGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CAA 72 bp | TCCTGTCTTCTGTTGCCTTCCATGAGCTTTTTGCCTTaGAGTGCACTGACCAGTCACTTTGTATGGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SCLLLPSMSFLP*SALTSHFVWCL Trigger: GAGACACCATACAAAGTGACTGGTCAGTGCACTCAAAGGCAAAAAGCTCATGGAAGGCAACAGAAGACAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CAA 72 bp | CACTTCTCCTGTCTTCTGTTGCCTTCCATGAGCTTTTaGCCTTTGAGTGCACTGACCAGTCACTTTGTATGG | + |
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Preference number: 6 (lower is better) Translates to: HFSCLLLPSMSF*PLSALTSHFVW Trigger: CCATACAAAGTGACTGGTCAGTGCACTCAAAGGCAAAAAGCTCATGGAAGGCAACAGAAGACAGGAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS CAA 90 bp | TTTAGCTGTCACTTCTCCTGTCTTCTGTTGCCTTCCATGAGCTTTTaGCCTTTGAGTGCACTGACCAGTCACTTTGTATGGTGTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: FSCHFSCLLLPSMSF*PLSALTSHFVWCLS Trigger: TGAGAGACACCATACAAAGTGACTGGTCAGTGCACTCAAAGGCAAAAAGCTCATGGAAGGCAACAGAAGACAGGAGAAGTGACAGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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| CDS GCA 72 bp | TCTTCTGTTGCCTTCCATGAGCTTTTTGCCTTTGAGTaGACTGACCAGTCACTTTGTATGGTGTCTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSVAFHELFAFE*TDQSLCMVSLS Trigger: ACTGAGAGACACCATACAAAGTGACTGGTCAGTGCACTCAAAGGCAAAAAGCTCATGGAAGGCAACAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426578.1 |
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