RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000160233

Ensembl transcript IDs: ENST00000291592.6

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGGCGACACTCAGGCAGCGTGGCGTGAGGGAAGCAGGCGGAGCCTaGGGCTGCCTCCACTCATACACTGGGCCTGGCCCCTCACCCACC +
Preference number: 1 (lower is better)
Translates to: MATLRQRGVREAGGA*GCLHSYTGPGPSPT
Trigger: GGTGGGTGAGGGGCCAGGCCCAGTGTATGAGTGGAGGCAGCCCCAGGCTCCGCCTGCTTCCCTCACGCCACGCTGCCTGAGTGTCGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp ACCTGCCAAGAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTaGTGTGGGGCCAGCTGCCTCCCAGCCATGGACCACACCTGCTCA +
Preference number: 1 (lower is better)
Translates to: TCQERPGLRAALRAM*CGASCLPAMDHTCS
Trigger: TGAGCAGGTGTGGTCCATGGCTGGGAGGCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTCTTGGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CTCCAAACAGTGGAGCTGGACACCCCGCCACATGCTGGCCCTGCCTaGACCACAAGGACCACGTGGCCCCACACCAGCACGGGTGCACCC +
Preference number: 1 (lower is better)
Translates to: LQTVELDTPPHAGPA*TTRTTWPHTSTGAP
Trigger: GGGTGCACCCGTGCTGGTGTGGGGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp GGGGGCACAGTAAGGCCAGGACGGTGGGCAGCTCATGGACCTGACTaGGCTCACAGTGCAGGGGACAGGGCCTCCGGTGTCCTCCTGGTC +
Preference number: 1 (lower is better)
Translates to: GGTVRPGRWAAHGPD*AHSAGDRASGVLLV
Trigger: GACCAGGAGGACACCGGAGGCCCTGTCCCCTGCACTGTGAGCTCAGTCAGGTCCATGAGCTGCCCACCGTCCTGGCCTTACTGTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp GGCAGGGGGCACAGTAAGGCCAGGACGGTGGGCAGCTCATGGACCTaGCTGAGCTCACAGTGCAGGGGACAGGGCCTCCGGTGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: GRGHSKARTVGSSWT*LSSQCRGQGLRCPP
Trigger: AGGAGGACACCGGAGGCCCTGTCCCCTGCACTGTGAGCTCAGTCAGGTCCATGAGCTGCCCACCGTCCTGGCCTTACTGTGCCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CTTCCTCCAAACAGTGGAGCTGGACACCCCGCCACATGCTGGCCCTaGCTGGACCACAAGGACCACGTGGCCCCACACCAGCACGGGTGC +
Preference number: 1 (lower is better)
Translates to: LPPNSGAGHPATCWP*LDHKDHVAPHQHGC
Trigger: GCACCCGTGCTGGTGTGGGGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CCAAGAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTaGGGCCAGCTGCCTCCCAGCCATGGACCACACCTGCTCAGAGTT +
Preference number: 1 (lower is better)
Translates to: PRASRTPRRPPCYVL*GQLPPSHGPHLLRV
Trigger: AACTCTGAGCAGGTGTGGTCCATGGCTGGGAGGCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp GAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCAGCGTGGCGTaGGGGAAGCAGGCGGAGCCTGGGGCTGCCTCCACTCATACACTG +
Preference number: 1 (lower is better)
Translates to: EVSVLRAWRHSGSVA*GKQAEPGAASTHTL
Trigger: CAGTGTATGAGTGGAGGCAGCCCCAGGCTCCGCCTGCTTCCCTCACGCCACGCTGCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CAGACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTaGCAAGAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGC +
Preference number: 1 (lower is better)
Translates to: QTRPKPIPHILHEGT*QERPGLRAALRAMC
Trigger: GCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp GCACGGGTGCACCCCCGGGGGCTGGCACTTGGTTCTAGCTCTCACTaGAAGGGTGAGTGGCGCTGCCAGTTTCCGTGGAGGTCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: ARVHPRGLALGSSSH*KGEWRCQFPWRSLS
Trigger: GGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAGTGCCAGCCCCCGGGGGTGCACCCGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTaGAAAGAACTGAGTCACAGGGAGAGGCGGGGTGCTCTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: PNGQQVPGCTCSHLG*KELSHRERRGALGQ
Trigger: CTGCCCCAGAGCACCCCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CGGGCTCCTTGCCTTGCTGCCTTGGCTCTGGTGACCTCTGCATTTTaGAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCCA +
Preference number: 1 (lower is better)
Translates to: RAPCLAALALVTSAF*RHPGGAAQDGSPTP
Trigger: TGGAGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp ACAGCTGCAGGGAGACTGGGGTCACGGTTTTCAGCTCCTGGCCACTaGGGTCCAGGAAGGCCAGCCAGACCAGGCCTAAGCCAATCCCCC +
Preference number: 1 (lower is better)
Translates to: TAAGRLGSRFSAPGH*GPGRPARPGLSQSP
Trigger: GGGGGATTGGCTTAGGCCTGGTCTGGCTGGCCTTCCTGGACCGCAGTGGCCAGGAGCTGAAAACCGTGACCCCAGTCTCCCTGCAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CCCCGGGGGCTGGCACTTGGTTCTAGCTCTCACTGGAAGGGTGAGTaGCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGC +
Preference number: 1 (lower is better)
Translates to: PRGLALGSSSHWKGE*RCQFPWRSLSSEHG
Trigger: GCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAGTGCCAGCCCCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp GGGCACTCTGCTGTGTCAGCGCCCACTTCCTCCAAACAGTGGAGCTaGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCA +
Preference number: 1 (lower is better)
Translates to: GHSAVSAPTSSKQWS*TPRHMLALPGPQGP
Trigger: TGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGAGGAAGTGGGCGCTGACACAGCAGAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp CCCTCTGGTGAACCCTCTCGCTTGCAGAGCACCCCCTTAGTCCTCTaGGTGCATATCCACAGCCTGCAGGGCCCCGTGTGGGAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: PSGEPSRLQSTPLVL*VHIHSLQGPVWERL
Trigger: CAGCCTCTCCCACACGGGGCCCTGCAGGCTGTGGATATGCACTCAGAGGACTAAGGGGGTGCTCTGCAAGCGAGAGGGTTCACCAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CCCGGGGTGAAAGTGGTGAATGGGCGGCATCAGGAAGCTAAGCCCTaGCCATCCAGTCTGGCTGGAAGATTCTGGCTCCCCGGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: PGVKVVNGRHQEAKP*PSSLAGRFWLPGGP
Trigger: TGGGCCACCGGGGAGCCAGAATCTTCCAGCCAGACTGGATGGGCAGGGCTTAGCTTCCTGATGCCGCCCATTCACCACTTTCACCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp GCTGGCCGGGCCCTGACTTCAGCCTGGACACTCGTCCCCATGTCCTaGCCAGATGATCACTGGGCAGAGCCGGAGATTCCTGGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: AGRALTSAWTLVPMS*PDDHWAEPEIPGCF
Trigger: AAAGCAGCCAGGAATCTCCGGCTCTGCCCAGTGATCATCTGGGCAGGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CTTGGCTCTGGTGACCTCTGCATTTTGCAGACACCCGGGAGGAGCTaGCCAAGACGGCAGCCCCACTCCAGACCCTGTCTGATGGGCCGT +
Preference number: 1 (lower is better)
Translates to: LGSGDLCILQTPGRS*PRRQPHSRPCLMGR
Trigger: ACGGCCCATCAGACAGGGTCTGGAGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CCTGCCTTCACCACCCAGGCCTCAGTTCACACTCTCCTTGGGACCTaGGGTCATGCGTGCTGGGCAAACCCACCACAGGCACCCTGGCAT +
Preference number: 1 (lower is better)
Translates to: PAFTTQASVHTLLGT*GHACWANPPQAPWH
Trigger: ATGCCAGGGTGCCTGTGGTGGGTTTGCCCAGCACGCATGACCCCAGGTCCCAAGGAGAGTGTGAACTGAGGCCTGGGTGGTGAAGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp AGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTaGGTCACAGGGAGAGGCGGGGTGCTCTGGGGCAGGCAGCGATGT +
Preference number: 1 (lower is better)
Translates to: SRSQGAHAHIWAAKN*VTGRGGVLWGRQRC
Trigger: ACATCGCTGCCTGCCCCAGAGCACCCCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp CCCGCCTCACCGCTATCAACACTGGTGGCCTGGCTGGTGTGGGGCTaGGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCAGTG +
Preference number: 1 (lower is better)
Translates to: PASPLSTLVAWLVWG*AHGLCRCGKLLQSV
Trigger: CACTGATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTGAGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp GGTTCTAGCTCTCACTGGAAGGGTGAGTGGCGCTGCCAGTTTCCGTaGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCAGCGTGG +
Preference number: 1 (lower is better)
Translates to: GSSSHWKGEWRCQFP*RSLSSEHGDTQAAW
Trigger: CCACGCTGCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp TTCCCTTTGTCCCCGCCTCACCGCTATCAACACTGGTGGCCTGGCTaGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCT +
Preference number: 1 (lower is better)
Translates to: FPLSPPHRYQHWWPG*CGAEPTASADVGNS
Trigger: AGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTGAGGCGGGGACAAAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp ACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCAACACTGGTaGCCTGGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTG +
Preference number: 1 (lower is better)
Translates to: TETFPLSPPHRYQHW*PGWCGAEPTASADV
Trigger: CACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp GGGCTGGCACTTGGTTCTAGCTCTCACTGGAAGGGTGAGTGGCGCTaGCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACT +
Preference number: 1 (lower is better)
Translates to: GLALGSSSHWKGEWR*QFPWRSLSSEHGDT
Trigger: AGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAGTGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp ATTTGGCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATaGTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGG +
Preference number: 1 (lower is better)
Translates to: IWPGHPNGQQVPGCT*SHLGCKELSHRERR
Trigger: CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp GGGCTGATTTGGCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTaGACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAG +
Preference number: 1 (lower is better)
Translates to: GLIWPGHPNGQQVPG*TCSHLGCKELSHRE
Trigger: CTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp TGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTaGAATCAGTGCAGCATGGAGGCAGAGGGGCTGATTTGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: WCGAEPTASADVGNS*NQCSMEAEGLIWPG
Trigger: CCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CTGCCCAAGACGGCAGCCCCACTCCAGACCCTGTCTGATGGGCCGTaGACGTCTGCACATTCCACAGAATGTGACCAGCTGTGGAGCTCA +
Preference number: 1 (lower is better)
Translates to: LPKTAAPLQTLSDGP*TSAHSTECDQLWSS
Trigger: TGAGCTCCACAGCTGGTCACATTCTGTGGAATGTGCAGACGTGCACGGCCCATCAGACAGGGTCTGGAGTGGGGCTGCCGTCTTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CTCTTGCAATCAGTGCAGCATGGAGGCAGAGGGGCTGATTTGGCCTaGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACA +
Preference number: 1 (lower is better)
Translates to: LLQSVQHGGRGADLA*ASQRAAGPRVHMLT
Trigger: TGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp GGAAACTCTTGCAATCAGTGCAGCATGGAGGCAGAGGGGCTGATTTaGCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGC +
Preference number: 1 (lower is better)
Translates to: GNSCNQCSMEAEGLI*PGHPNGQQVPGCTC
Trigger: GCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp ATCAAGAACAGCTGCAGGGAGACTGGGGTCACGGTTTTCAGCTCCTaGCCACTGCGGTCCAGGAAGGCCAGCCAGACCAGGCCTAAGCCA +
Preference number: 1 (lower is better)
Translates to: IKNSCRETGVTVFSS*PLRSRKASQTRPKP
Trigger: TGGCTTAGGCCTGGTCTGGCTGGCCTTCCTGGACCGCAGTGGCCAGGAGCTGAAAACCGTGACCCCAGTCTCCCTGCAGCTGTTCTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp TATCAGCGCCTTCAGCGGGTGAACCTGCACCCAAGCTCCCTCTGGTaGACCCTCTCGCTTGCAGAGCACCCCCTTAGTCCTCTGAGTGCA +
Preference number: 1 (lower is better)
Translates to: YQRLQRVNLHPSSLW*TLSLAEHPLSPLSA
Trigger: TGCACTCAGAGGACTAAGGGGGTGCTCTGCAAGCGAGAGGGTTCACCAGAGGGAGCTTGGGTGCAGGTTCACCCGCTGAAGGCGCTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp ATGTGGGAAACTCTTGCAATCAGTGCAGCATGGAGGCAGAGGGGCTaGTTTGGCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: MWETLAISAAWRQRG*FGLGIPTGSRSQGA
Trigger: TGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTTTCCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 90 bp AGTTCCTTAGAAGCCGGGCTCCTTGCCTTGCTGCCTTGGCTCTGGTaGCCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACG +
Preference number: 1 (lower is better)
Translates to: SSLEAGLLALLPWLW*PLHFADTREELPKT
Trigger: CGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGGCTTCTAAGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp GCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCAGTaGAGCATGGAGGCAGAGGGGCTGATTTGGCCTGGGCATCCCAAC +
Preference number: 1 (lower is better)
Translates to: AEPTASADVGNSCNQ*SMEAEGLIWPGHPN
Trigger: GTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CTCAATACAAAATGGCCCTCTGCTGGCCGGGCCCTGACTTCAGCCTaGACACTCGTCCCCATGTCCTGCCCAGATGATCACTGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: LNTKWPSAGRALTSA*TLVPMSCPDDHWAE
Trigger: CTCTGCCCAGTGATCATCTGGGCAGGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CCACAGAATGTGACCAGCTGTGGAGCTCAATACAAAATGGCCCTCTaGTGGCCGGGCCCTGACTTCAGCCTGGACACTCGTCCCCATGTC +
Preference number: 1 (lower is better)
Translates to: PQNVTSCGAQYKMAL*WPGPDFSLDTRPHV
Trigger: GACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTATTGAGCTCCACAGCTGGTCACATTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CAGAATGTGACCAGCTGTGGAGCTCAATACAAAATGGCCCTCTGCTaGCCGGGCCCTGACTTCAGCCTGGACACTCGTCCCCATGTCCTG +
Preference number: 1 (lower is better)
Translates to: QNVTSCGAQYKMALC*PGPDFSLDTRPHVL
Trigger: CAGGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTATTGAGCTCCACAGCTGGTCACATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CTGACTGGCGAACAGAAATCCCATCAAGAACAGCTGCAGGGAGACTaGGGTCACGGTTTTCAGCTCCTGGCCACTGCGGTCCAGGAAGGC +
Preference number: 1 (lower is better)
Translates to: LTGEQKSHQEQLQGD*GHGFQLLATAVQEG
Trigger: GCCTTCCTGGACCGCAGTGGCCAGGAGCTGAAAACCGTGACCCCAGTCTCCCTGCAGCTGTTCTTGATGGGATTTCTGTTCGCCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp GCCATGGACCACACCTGCTCAGAGTTCCTTAGAAGCCGGGCTCCTTaGCTTGCTGCCTTGGCTCTGGTGACCTCTGCATTTTGCAGACAC +
Preference number: 1 (lower is better)
Translates to: AMDHTCSEFLRSRAP*LAALALVTSAFCRH
Trigger: GTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGGCTTCTAAGGAACTCTGAGCAGGTGTGGTCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CCTGTGCACCTCCTGAAGGGCCACGTCTGGGTGATGTCCAGTGTCTaGGCTGATTCTAGGGTAAGGACAAATGAAGAGTCCCCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: PVHLLKGHVWVMSSV*ADSRVRTNEESPGS
Trigger: GCTGCCAGGGGACTCTTCATTTGTCCTTACCCTAGAATCAGCCCAGACACTGGACATCACCCAGACGTGGCCCTTCAGGAGGTGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp TTGCAAGCACCCACGGTGGGAGCTCCAGTGAGCATGAAGGAGCTTTaGGGTCCCACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGG +
Preference number: 1 (lower is better)
Translates to: LQAPTVGAPVSMKEL*GPTVLGSLWSSLEG
Trigger: CCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTGGGACCCCAAAGCTCCTTCATGCTCACTGGAGCTCCCACCGTGGGTGCTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 90 bp CAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTTATCCTATaGTTTCAGCCACGTGTCCTCTGGAAGGAAATCCCCACGGGCCCA +
Preference number: 1 (lower is better)
Translates to: QPGMAPVIHLYILIL*FQPRVLWKEIPTGP
Trigger: TGGGCCCGTGGGGATTTCCTTCCAGAGGACACGTGGCTGAAAGCATAGGATAAGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTaGACAGGCTCTCACCTTCCAAGTCACCTGATACTTTCCAAAGAG +
Preference number: 1 (lower is better)
Translates to: LTLHTRGTSEPVHTP*TGSHLPSHLILSKE
Trigger: CTCTTTGGAAAGTATCAGGTGACTTGGAAGGTGAGAGCCTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp ATTCACCTATACATCCTTATCCTATGCTTTCAGCCACGTGTCCTCTaGAAGGAAATCCCCACGGGCCCAGGGCACTCTGCTGTGTCAGCG +
Preference number: 1 (lower is better)
Translates to: IHLYILILCFQPRVL*KEIPTGPGHSAVSA
Trigger: CGCTGACACAGCAGAGTGCCCTGGGCCCGTGGGGATTTCCTTCCAGAGGACACGTGGCTGAAAGCATAGGATAAGGATGTATAGGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp GCAACAGTTCACCTGCCCTACCTGCATCTATCAGACAGCCAGGGATaGCACCAGTCATTCACCTATACATCCTTATCCTATGCTTTCAGC +
Preference number: 1 (lower is better)
Translates to: ATVHLPYLHLSDSQG*HQSFTYTSLSYAFS
Trigger: GCTGAAAGCATAGGATAAGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGTAGGGCAGGTGAACTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 90 bp CTGAGATTCCTGGCAGCAAAGGTGAAAAGAGAGAGTTCCTGTTGCTaGAGAAAACGAAGCATCCCATTGATTGGCCTTGAAACATCAATC +
Preference number: 1 (lower is better)
Translates to: LRFLAAKVKRESSCC*RKRSIPLIGLETSI
Trigger: GATTGATGTTTCAAGGCCAATCAATGGGATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCTTTTCACCTTTGCTGCCAGGAATCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCAGGGAGGGACGGGCCTaGCCCTGCCCTGTGCACCTC +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCREGRA*PCPVHL
Trigger: GAGGTGCACAGGGCAGGGGCAGGCCCGTCCCTCCCT...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCCCGTGTGGGAGAGGCTaGCATGGTGGAAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCPCGRG*HGGRRR
Trigger: CCGCCTCCTTCCACCATGCCAGCCTCTCCCACACGG...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCCCCCAGGGCCCTTCATaGGAGGAGCCTCCTCACTCA +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCPQGPS*EEPPHS
Trigger: TGAGTGAGGAGGCTCCTCTCATGAAGGGCCCTGGGG...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCCACACCAGCACGGGTaGACCCCCGGGGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTPHQHG*TPGGWH
Trigger: GTGCCAGCCCCCGGGGGTGCACCCGTGCTGGTGTGG...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CCCCTCACCCACCCCGCGTCTGCACTGTGGGCAGAGCAAAGCCTACCAAGCACCGAGCTGAGATCGCCCTaGGGCAGGGCCTCCCGCATC +
Preference number: 2 (lower is better)
Translates to: PLTHPASALWAEQSLPSTELRSP*GRASRI
Trigger: GATGCGGGAGGCCCTGCCCCAGGGCGATCTCAGCTC...GGTGCTTGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGCCCTGACTTCAGCCTaGACACTCGTCCCCATGTCC +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCALTSA*TLVPMS
Trigger: GGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCCTCGTCCCCATGTCCTaGCCAGATGATCACTGGGCA +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCLVPMS*PDDHWA
Trigger: TGCCCAGTGATCATCTGGGCAGGACATGGGGACGAG...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCACTTCCTCCAAACAGTaGAGCTGGACACCCCGCCAC +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCTSSKQ*SWTPRH
Trigger: GTGGCGGGGTGTCCAGCTCCACTGTTTGGAGGAAGT...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp CCGGGCTCCTTGCCTTGCTGCCTTGGCTCTGGTGACCTCTGCATTTaGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: PGSLPCCLGSGDLCI*QTPGRSCPRRQPHS
Trigger: GGAGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTCACCCCGCCACATGCTaGCCCTGCCTGGACCACAAG +
Preference number: 2 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPHPATC*PCLDHK
Trigger: CTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTG...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp GGAGAGGCCCTGCCTTCACCACCCAGGCCTCAGTTCACACTCTCCTaGGGACCTGGGGTCATGCGTGCTGGGCAAACCCACCACAGGCAC +
Preference number: 2 (lower is better)
Translates to: GEALPSPPRPQFTLS*GPGVMRAGQTHHRH
Trigger: GTGCCTGTGGTGGGTTTGCCCAGCACGCATGACCCCAGGTCCCAAGGAGAGTGTGAACTGAGGCCTGGGTGGTGAAGGCAGGGCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGCCAAGCTCCCTCTGGTaGACCCTCTCGCTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVPSSLW*TLSLAE
Trigger: CTCTGCAAGCGAGAGGGTTCACCAGAGGGAGCTTGG...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGGGCAGCTCATGGACCTaGCTGAGCTCACAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVGSSWT*LSSQCR
Trigger: CCTGCACTGTGAGCTCAGTCAGGTCCATGAGCTGCC...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGTATCAGGGTTAGGGTaGGGATTGGGTCAGGGGTTA +
Preference number: 2 (lower is better)
Translates to: ERPGLRAALRAMCCGASCVSGLG*GLGQGL
Trigger: TAACCCCTGACCCAATCCTCACCCTAACCCTGATAC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTGGCGGAGCCTGGGGCTaGCTCCACTCATACACTGGG +
Preference number: 2 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTGGAWG*LHSYTG
Trigger: CCCAGTGTATGAGTGGAGGCAGCCCCAGGCTCCGCC...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTCTGCAGGGCCCCGTGTaGGAGAGGCTGGCATGGTGG +
Preference number: 2 (lower is better)
Translates to: TRPKPIPHILHEGTCQERLQGPV*ERLAWW
Trigger: CCACCATGCCAGCCTCTCCCACACGGGGCCCTGCAG...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGCGCTGCCAGTTTCCGTaGAGGTCTCTGTCCTCCGAG +
Preference number: 2 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVRCQFP*RSLSSE
Trigger: CTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCG...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGCACTGGAAGGGTGAGTaGCGCTGCCAGTTTCCGTGG +
Preference number: 2 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVHWKGE*RCQFPW
Trigger: CCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTG...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGGGCATGGAGAAGGGGTaGCAGGAGGACGCCAATCAC +
Preference number: 2 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVGMEKG*QEDANH
Trigger: GTGATTGGCGTCCTCCTGCCACCCCTTCTCCATGCC...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTCACCTACTACAAAAGTaGCAGCAGCCACCGGCGGGG +
Preference number: 2 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPHLLQK*QQPPAG
Trigger: CCCCGCCGGTGGCTGCTGTCACTTTTGTAGTAGGTG...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATAGCGCCTTCAGCGGGTaGACCTGCACCCAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: GWCGAEPTASADVGNSCNSAFSG*TCTQAP
Trigger: GGGAGCTTGGGTGCAGGTTCACCCGCTGAAGGCGCT...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTTCTGTCCTCCGAGCATaGCGACACTCAGGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPSVLRA*RHSGSV
Trigger: CACGCTGCCTGAGTGTCGCCATGCTCGGAGGACAGA...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCTCTCACTGGAAGGGTaGGTGGCGCTGCCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTLSLEG*VALPVS
Trigger: GGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAG...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTAAGGGTGAGTGGCGCTaGCAGTTTCCGTGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPKGEWR*QFPWRS
Trigger: AGACCTCCACGGAAACTGGCAGCGCCACTCACCCTT...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTAAGGGCACCCCAAAATaGGAGATGGGACTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPKGTPK*EMGLAG
Trigger: GCCAGCCAGTCCCATCTCGCATTTTGGGGTGCCCTT...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTGCTGCTGTCTTCCCCTaGGCAAGCTACCCTGGACTT +
Preference number: 2 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPAAVFP*ASYPGL
Trigger: AAGTCCAGGGTAGCTTGCCCAGGGGAAGACAGCAGC...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp GGGAAACTCTTGCAATCAGTGCAGCATGGAGGCAGAGGGGCTGATTaGGCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATG +
Preference number: 2 (lower is better)
Translates to: GKLLQSVQHGGRGAD*AWASQRAAGPRVHM
Trigger: CATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCTCAGGCAGCGTGGCGTaGGGGAAGCAGGCGGAGCCT +
Preference number: 2 (lower is better)
Translates to: PCPHCELRHSLCPRLTAISGSVA*GKQAEP
Trigger: AGGCTCCGCCTGCTTCCCTCACGCCACGCTGCCTGA...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTTCACTCACCCACAGCTaGCAGCACAACCCACTCCCC +
Preference number: 2 (lower is better)
Translates to: TRPKPIPHILHEGTCQERSLTHS*QHNPLP
Trigger: GGGGAGTGGGTTGTGCTGGCAGCTGTGGGTGAGTGA...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCAGCAACAGTTCACCTaGCCTACCTGCATCTATCAG +
Preference number: 2 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGQQQFT*PTCIYQ
Trigger: CTGATAGATGCAGGTAGGGCAGGTGAACTGTTGCTG...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTTACAAAATGGCCCTCTaGTGGCCGGGCCCTGACTTC +
Preference number: 2 (lower is better)
Translates to: TRPKPIPHILHEGTCQERYKMAL*WPGPDF
Trigger: GAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTA...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CCCGTGACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGCGTCACACGGATGTGTaGCAAAACCACCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: PVTHTAHTGYLRTSAHTLRHTDV*QNHPAW
Trigger: CCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACG...CAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCCAGTGCACACACCCTaGACAGGCTCTCACCTTCCA +
Preference number: 2 (lower is better)
Translates to: GWCGAEPTASADVGNSCNPVHTP*TGSHLP
Trigger: TGGAAGGTGAGAGCCTGTCCAGGGTGTGTGCACTGG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGTCAGACAGCCAGGGATaGCACCAGTCATTCACCTAT +
Preference number: 2 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGSDSQG*HQSFTY
Trigger: ATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGA...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTCCAGGGATGGTCCTGTaGATCAGGATGGCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: TRPKPIPHILHEGTCQERPGMVL*IRMALL
Trigger: CAGCAGAGCCATCCTGATCCACAGGACCATCCCTGG...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp ACCTGCTCAGAGTTCCTTAGAAGCCGGGCTCCTTGCCTTGCTGCCTaGGCTCTGGTGACCTCTGCATTTTGCAGACACCCGGGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: TCSEFLRSRAPCLAA*ALVTSAFCRHPGGA
Trigger: AGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGGCTTCTAAGGAACTCTGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGTACCTCAGAACCAGTaGACACACCCTGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: GWCGAEPTASADVGNSCNVPQNQ*THPGQA
Trigger: AGCCTGTCCAGGGTGTGTGCACTGGTTCTGAGGTAC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTCTGGGCAAGCTACCCTaGACTTTTCCCAGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: TRPKPIPHILHEGTCQERLGKLP*TFPRSL
Trigger: GAGAGACCTGGGAAAAGTCCAGGGTAGCTTGCCCAG...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGTCCAAACAGTGGAGCTaGACACCCCGCCACATGCTG +
Preference number: 2 (lower is better)
Translates to: GCTCSHLGCKELSHRERRSKQWS*TPRHML
Trigger: CAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGA...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTAGCATGAAGGAGCTTTaGGGTCCCACAGTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: TRPKPIPHILHEGTCQERSMKEL*GPTVLG
Trigger: CCCCAACACTGTGGGACCCCAAAGCTCCTTCATGCT...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp CTTGCAAGCACCCACGGTGGGAGCTCCAGTGAGCATGAAGGAGCTTaGGGGTCCCACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGG +
Preference number: 2 (lower is better)
Translates to: LASTHGGSSSEHEGA*GSHSVGVSMVFLRG
Trigger: CCCTCTAAGGAAGACCATAGAGACCCCAACACTGTGGGACCCCAAAGCTCCTTCATGCTCACTGGAGCTCCCACCGTGGGTGCTTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCATGGCTGTGACACCTaGCTCAGGGAAGAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: GWCGAEPTASADVGNSCNHGCDT*LREEQK
Trigger: CTTTTGCTCTTCCCTGAGGCAGGTGTCACAGCCATG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCCTGGAGGTGCTGCTGTaGCTGAGTGCAACAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PCPHCELRHSLCPRLTAILEVLL*LSATVG
Trigger: CCCCACTGTTGCACTCAGGCACAGCAGCACCTCCAG...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGAGAGAGAGTTCCTGTTaGTGGAGAAAACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVRESSC*WRKRSI
Trigger: GATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCT...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTTCCTTAGAGGGGAGGTaGTTTCACCTATGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTSLEGR*FHLCWW
Trigger: CCACCAACATAGGTGAAAGCACCTCCCCTCTAAGGA...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGTCTGTTACTTTGCTCTaGAAACAGGGCTTACGTTCC +
Preference number: 2 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGSVTLL*KQGLRS
Trigger: GGAACGTAAGCCCTGTTTCCAGAGCAAAGTAACAGA...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTTCCTGGCAGCAAAGGTaGAAAGAGAGAGTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTSWQQR*KERVPV
Trigger: AACAGGAACTCTCTCTTTTCACCTTTGCTGCCAGGA...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAAGGCAGCCCAGCAAATTaGGGCAGGGAGGGACGGGCC +
Preference number: 2 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQGSPAN*GREGRA
Trigger: GGCCCGTCCCTCCCTGCCCCAATTTGCTGGGCTGCC...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp CTGGCATGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTaGAAGTTCCACTGGGATAATTTCCTGATGGTATCGTCACGGGCA +
Preference number: 2 (lower is better)
Translates to: LAWWKEAECHDGQPG*KFHWDNFLMVSSRA
Trigger: TGCCCGTGACGATACCATCAGGAAATTATCCCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTGCACTAAATTATCTCTaGGATTCCTGGCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTALNYL*DSWQQR
Trigger: CCTTTGCTGCCAGGAATCTCAGAGATAATTTAGTGC...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGTGCATATCCACAGCCTaGAGGGCCCCGTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMCISTA*RAPCGR
Trigger: TCTCCCACACGGGGCCCTGCAGGCTGTGGATATGCA...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGCCCCAGGTATGTGGCTaGTGTCTTCCCCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMPQVCG*CLPLGK
Trigger: CTTGCCCAGGGGAAGACAGCAGCCACATACCTGGGG...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTTGCACCCCCGGGGGCTaGCACTTGGTTCTAGCTCTC +
Preference number: 2 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPCTPGG*HLVLAL
Trigger: GAGAGCTAGAACCAAGTGCCAGCCCCCGGGGGTGCA...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTACCACAAGGACCACGTaGCCCCACACCAGCACGGGT +
Preference number: 2 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPTTRTT*PHTSTG
Trigger: ACCCGTGCTGGTGTGGGGCCACGTGGTCCTTGTGGT...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTCATGCTGGCCCTGCCTaGACCACAAGGACCACGTGG +
Preference number: 2 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPHAGPA*TTRTTW
Trigger: CCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATG...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCAGTTCACACTCTCCTTaGGACCTGGGGTCATGCGTG +
Preference number: 2 (lower is better)
Translates to: PCPHCELRHSLCPRLTAISSHSP*DLGSCV
Trigger: CACGCATGACCCCAGGTCCCAAGGAGAGTGTGAACT...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCAAAGAGGTCACAAGATaGGAGAGGAGGGGACGGCAG +
Preference number: 2 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIKEVTR*ERRGRQ
Trigger: CTGCCGTCCCCTCCTCTCCCATCTTGTGACCTCTTT...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGGGTTCTAGCTCTCACTaGAAGGGTGAGTGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMGSSSH*KGEWRC
Trigger: GCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACC...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGACAGACACACAATGTACACTaGTCACTCATTTACACCCCC +
Preference number: 2 (lower is better)
Translates to: DSHCTHGVPQNQCTHPGQTHNVH*SLIYTP
Trigger: GGGGGTGTAAATGAGTGATCAGTGTACATTGTGTGT...CTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR GCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGTGGTCTCTGTTACTTTaGTCTGGAAACAGGGCTTAC +
Preference number: 2 (lower is better)
Translates to: GCTCSHLGCKELSHRERRWSLLL*SGNRAY
Trigger: GTAAGCCCTGTTTCCAGAGCAAAGTAACAGAGACCA...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCAGTACTCCGGGCCTTaGAAAAAGAGCTGTTTTATA +
Preference number: 2 (lower is better)
Translates to: GWCGAEPTASADVGNSCNQYSGP*KKSCFI
Trigger: TATAAAACAGCTCTTTTTCCAAGGCCCGGAGTACTG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAACACCGCTATCAACACTaGTGGCCTGGCTGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQHRYQH*WPGWCG
Trigger: CCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTG...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTGAGCACACATGGCTGTaGCACCTGCCTCAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: LIGLETSIPSTPGLGKRAEHTWL*HLPQGR
Trigger: TCTTCCCTGAGGCAGGTGTCACAGCCATGTGTGCTC...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTACCCCCTTAGTCCTCTaGGTGCATATCCACAGCCTG +
Preference number: 2 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPTPLVL*VHIHSL
Trigger: CAGGCTGTGGATATGCACTCAGAGGACTAAGGGGGT...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGAACGAAGCATCCCATTaGTTGGCCTTGAAACATCAA +
Preference number: 2 (lower is better)
Translates to: GCTCSHLGCKELSHRERRNEASH*LALKHQ
Trigger: TTGATGTTTCAAGGCCAATCAATGGGATGCTTCGTT...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACGAGAGGCTGGCATGGTaGAAGGAGGCGGAATGTCAC +
Preference number: 2 (lower is better)
Translates to: SQVSLHIVHPITELKFWHERLAW*KEAECH
Trigger: GTGACATTCCGCCTCCTTCCACCATGCCAGCCTCTC...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATACTGAACTGAAATTTTaGCACTACGGTTACTCAAAA +
Preference number: 2 (lower is better)
Translates to: GWCGAEPTASADVGNSCNTELKF*HYGYSK
Trigger: TTTTGAGTAACCGTAGTGCCAAAATTTCAGTTCAGT...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAATTTCACCTATGTTGGTaGGGCAGGGGGCACAGTAAG +
Preference number: 2 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQFHLCW*GRGHSK
Trigger: CTTACTGTGCCCCCTGCCCCACCAACATAGGTGAAA...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACATGGACAGCCCGGGTTaGAGTTCCACTGGGATAATT +
Preference number: 2 (lower is better)
Translates to: SQVSLHIVHPITELKFWHMDSPG*SSTGII
Trigger: AATTATCCCAGTGGAACTTCAACCCGGGCTGTCCAT...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTACCCCATTACTGAACTaGAATTTTGGCACTACGGTT +
Preference number: 2 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPTPLLN*NFGTTV
Trigger: AACCGTAGTGCCAAAATTTCAGTTCAGTAATGGGGT...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR TCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCCCCATTGATTGGCCTTaGAACATCAATCCCCAGTAC +
Preference number: 2 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIPIDWP*NINPQY
Trigger: GTACTGGGGATTGATGTTTCAAGGCCAATCAATGGG...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAAGAATGTGACCAGCTGTaGAGCTCAATACAAAATGGC +
Preference number: 2 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQECDQL*SSIQNG
Trigger: GCCATTTTGTATTGAGCTCCACAGCTGGTCACATTC...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 90 bp CAAAGAGAAACCACCCTCAACTTCCATTCATTTTTAAGCATCTGTTaGGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAAT +
Preference number: 2 (lower is better)
Translates to: QRETTLNFHSFLSIC*AKHLYIPTLQSTHN
Trigger: ATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCCAAACAGATGCTTAAAAATGAATGGAAGTTGAGGGTGGTTTCTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CCACGCCCCGCACCCATAGCCTCCAGCCAGCTCCTGTaGGGCCTGCGCCGTGAGTGGGCCTGGGAGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PRPAPIASSQLL*GLRREWAWESP
Trigger: GGGAGACTCCCAGGCCCACTCACGGCGCAGGCCCCACAGGAGCTGGCTGGAGGCTATGGGTGCGGGGCGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GCCTCCAGCCAGCTCCTGTGGGGCCTGCGCCGTGAGTaGGCCTGGGAGTCTCCCTGGCCTCAGTGGCCTTCC +
Preference number: 3 (lower is better)
Translates to: ASSQLLWGLRRE*AWESPWPQWPS
Trigger: GGAAGGCCACTGAGGCCAGGGAGACTCCCAGGCCCACTCACGGCGCAGGCCCCACAGGAGCTGGCTGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp CAGCGTGGCGTGAGGGAAGCAGGCGGAGCCTGGGGCTaGCTCCACTCATACACTGGGCCTGGCCCCTCACCC +
Preference number: 3 (lower is better)
Translates to: QRGVREAGGAWG*LHSYTGPGPSP
Trigger: GGGTGAGGGGCCAGGCCCAGTGTATGAGTGGAGGCAGCCCCAGGCTCCGCCTGCTTCCCTCACGCCACGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp CCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTaGCAAGAGCGTCCAGGACTCCGCGCCGCCCTCCGT +
Preference number: 3 (lower is better)
Translates to: PKPIPHILHEGT*QERPGLRAALR
Trigger: ACGGAGGGCGGCGCGGAGTCCTGGACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CCTCCAAACAGTGGAGCTGGACACCCCGCCACATGCTaGCCCTGCCTGGACCACAAGGACCACGTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: PPNSGAGHPATC*PCLDHKDHVAP
Trigger: TGGGGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp TCCCCGCCTCACCGCTATCAACACTGGTGGCCTGGCTaGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTG +
Preference number: 3 (lower is better)
Translates to: SPPHRYQHWWPG*CGAEPTASADV
Trigger: CACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTGAGGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CACCCCCGGGGGCTGGCACTTGGTTCTAGCTCTCACTaGAAGGGTGAGTGGCGCTGCCAGTTTCCGTGGAGG +
Preference number: 3 (lower is better)
Translates to: HPRGLALGSSSH*KGEWRCQFPWR
Trigger: CCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAGTGCCAGCCCCCGGGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GCTGTGTCAGCGCCCACTTCCTCCAAACAGTGGAGCTaGACACCCCGCCACATGCTGGCCCTGCCTGGACCA +
Preference number: 3 (lower is better)
Translates to: AVSAPTSSKQWS*TPRHMLALPGP
Trigger: TGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGAGGAAGTGGGCGCTGACACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp TCAGTGCAGCATGGAGGCAGAGGGGCTGATTTGGCCTaGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: SVQHGGRGADLA*ASQRAAGPRVH
Trigger: GTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp TTCCCTTTGTCCCCGCCTCACCGCTATCAACACTGGTaGCCTGGCTGGTGTGGGGCTGAGCCCACGGCCTCT +
Preference number: 3 (lower is better)
Translates to: FPLSPPHRYQHW*PGWCGAEPTAS
Trigger: AGAGGCCGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTGAGGCGGGGACAAAGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CCCCACCCCGCACAAGGAAGCCTCTGGGCAGGCATCTaGGGCTCCAAAGCCCAACAGGAAACCAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: PHPAQGSLWAGI*GSKAQQETSRE
Trigger: CTCCCTGCTGGTTTCCTGTTGGGCTTTGGAGCCCCAGATGCCTGCCCAGAGGCTTCCTTGTGCGGGGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp AGCTGCAGGGAGACTGGGGTCACGGTTTTCAGCTCCTaGCCACTGCGGTCCAGGAAGGCCAGCCAGACCAGG +
Preference number: 3 (lower is better)
Translates to: SCRETGVTVFSS*PLRSRKASQTR
Trigger: CCTGGTCTGGCTGGCCTTCCTGGACCGCAGTGGCCAGGAGCTGAAAACCGTGACCCCAGTCTCCCTGCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp CCCCACCAGGGATGGTCCTGTGGATCAGGATGGCTCTaGTGGTGGCTATACCAGCTCTGGGCCCATCCCCCA +
Preference number: 3 (lower is better)
Translates to: PHQGWSCGSGWL*WWLYQLWAHPP
Trigger: TGGGGGATGGGCCCAGAGCTGGTATAGCCACCAGCAGAGCCATCCTGATCCACAGGACCATCCCTGGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp GGTGACCTCTGCATTTTGCAGACACCCGGGAGGAGCTaGCCAAGACGGCAGCCCCACTCCAGACCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: GDLCILQTPGRS*PRRQPHSRPCL
Trigger: CAGACAGGGTCTGGAGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GCCCCACCCCACCAGGGATGGTCCTGTGGATCAGGATaGCTCTGCTGGTGGCTATACCAGCTCTGGGCCCAT +
Preference number: 3 (lower is better)
Translates to: APPHQGWSCGSG*LCWWLYQLWAH
Trigger: ATGGGCCCAGAGCTGGTATAGCCACCAGCAGAGCCATCCTGATCCACAGGACCATCCCTGGTGGGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGGAGCATGAAGGAGCTTaGGGGTCCCACAGTGTTGGG +
Preference number: 3 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGEHEGA*GSHSVG
Trigger: CCCAACACTGTGGGACCCCAAAGCTCCTTCATGCTC...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCCTGGTCTCTGTTACTTaGCTCTGGAAACAGGGCTTA +
Preference number: 3 (lower is better)
Translates to: ERPGLRAALRAMCCGASCLVSVT*LWKQGL
Trigger: TAAGCCCTGTTTCCAGAGCAAAGTAACAGAGACCAG...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCCCGGGGGCTGGCACTaGGTTCTAGCTCTCACTGGA +
Preference number: 3 (lower is better)
Translates to: GWCGAEPTASADVGNSCNPGGWH*VLALTG
Trigger: TCCAGTGAGAGCTAGAACCAAGTGCCAGCCCCCGGG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp GAACCCTCTCGCTTGCAGAGCACCCCCTTAGTCCTCTaGGTGCATATCCACAGCCTGCAGGGCCCCGTGTGG +
Preference number: 3 (lower is better)
Translates to: EPSRLQSTPLVL*VHIHSLQGPVW
Trigger: CCACACGGGGCCCTGCAGGCTGTGGATATGCACTCAGAGGACTAAGGGGGTGCTCTGCAAGCGAGAGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp CAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTaGGTCACAGGGAGAGGCGGGGTGCTCTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: QGAHAHIWAAKN*VTGRGGVLWGR
Trigger: CCTGCCCCAGAGCACCCCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp CCGCTATCAACACTGGTGGCCTGGCTGGTGTGGGGCTaGGCCCACGGCCTCTGCAGATGTGGGAAACTCTTG +
Preference number: 3 (lower is better)
Translates to: PLSTLVAWLVWG*AHGLCRCGKLL
Trigger: CAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp GCTGCCCAAGACGGCAGCCCCACTCCAGACCCTGTCTaGTGGGCCGTGCACGTCTGCACATTCCACAGAATG +
Preference number: 3 (lower is better)
Translates to: AAQDGSPTPDPV*WAVHVCTFHRM
Trigger: CATTCTGTGGAATGTGCAGACGTGCACGGCCCATCAGACAGGGTCTGGAGTGGGGCTGCCGTCTTGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp GAAGCCGGGCTCCTTGCCTTGCTGCCTTGGCTCTGGTaGCCTCTGCATTTTGCAGACACCCGGGAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: EAGLLALLPWLW*PLHFADTREEL
Trigger: CAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp TGCCTTGCTGCCTTGGCTCTGGTGACCTCTGCATTTTaGAGACACCCGGGAGGAGCTGCCCAAGACGGCAGC +
Preference number: 3 (lower is better)
Translates to: CLAALALVTSAF*RHPGGAAQDGS
Trigger: GCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp GCACAGGCTGGGCCAGCAGCATGGCCCGCTCACACCTaGCTCTCCAGGTTACACAGTTCAGGATCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: AQAGPAAWPAHT*LSRLHSSGSKS
Trigger: GGACTTGGATCCTGAACTGTGTAACCTGGAGAGGCAGGTGTGAGCGGGCCATGCTGCTGGCCCAGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp ACCACCCAGGCCTCAGTTCACACTCTCCTTGGGACCTaGGGTCATGCGTGCTGGGCAAACCCACCACAGGCA +
Preference number: 3 (lower is better)
Translates to: TTQASVHTLLGT*GHACWANPPQA
Trigger: TGCCTGTGGTGGGTTTGCCCAGCACGCATGACCCCAGGTCCCAAGGAGAGTGTGAACTGAGGCCTGGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GTGCTCCGCCACCCCTCCTTCCGCAAGTGTCCATCATaGGCTCCAGGCCCCGCCAGTAAAGAGGTCACAAGA +
Preference number: 3 (lower is better)
Translates to: VLRHPSFRKCPS*APGPASKEVTR
Trigger: TCTTGTGACCTCTTTACTGGCGGGGCCTGGAGCCCATGATGGACACTTGCGGAAGGAGGGGTGGCGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CAGGGATGGTCCTGTGGATCAGGATGGCTCTGCTGGTaGCTATACCAGCTCTGGGCCCATCCCCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: QGWSCGSGWLCW*LYQLWAHPPLL
Trigger: CAGCAGTGGGGGATGGGCCCAGAGCTGGTATAGCCACCAGCAGAGCCATCCTGATCCACAGGACCATCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CACCAGGGATGGTCCTGTGGATCAGGATGGCTCTGCTaGTGGCTATACCAGCTCTGGGCCCATCCCCCACTG +
Preference number: 3 (lower is better)
Translates to: HQGWSCGSGWLC*WLYQLWAHPPL
Trigger: CAGTGGGGGATGGGCCCAGAGCTGGTATAGCCACCAGCAGAGCCATCCTGATCCACAGGACCATCCCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp AAATGGCCCTCTGCTGGCCGGGCCCTGACTTCAGCCTaGACACTCGTCCCCATGTCCTGCCCAGATGATCAC +
Preference number: 3 (lower is better)
Translates to: KWPSAGRALTSA*TLVPMSCPDDH
Trigger: GTGATCATCTGGGCAGGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp ACTCTTGCAATCAGTGCAGCATGGAGGCAGAGGGGCTaGTTTGGCCTGGGCATCCCAACGGGCAGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: TLAISAAWRQRG*FGLGIPTGSRS
Trigger: GGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp GCCCTGACTTCAGCCTGGACACTCGTCCCCATGTCCTaGCCAGATGATCACTGGGCAGAGCCGGAGATTCCT +
Preference number: 3 (lower is better)
Translates to: ALTSAWTLVPMS*PDDHWAEPEIP
Trigger: AGGAATCTCCGGCTCTGCCCAGTGATCATCTGGGCAGGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp ACGGCAGCCCCACTCCAGACCCTGTCTGATGGGCCGTaGACGTCTGCACATTCCACAGAATGTGACCAGCTG +
Preference number: 3 (lower is better)
Translates to: TAAPLQTLSDGP*TSAHSTECDQL
Trigger: CAGCTGGTCACATTCTGTGGAATGTGCAGACGTGCACGGCCCATCAGACAGGGTCTGGAGTGGGGCTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp GGCTCCTTGCCTTGCTGCCTTGGCTCTGGTGACCTCTaGATTTTGCAGACACCCGGGAGGAGCTGCCCAAGA +
Preference number: 3 (lower is better)
Translates to: GSLPCCLGSGDL*ILQTPGRSCPR
Trigger: TCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp TCTCACTGGAAGGGTGAGTGGCGCTGCCAGTTTCCGTaGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAG +
Preference number: 3 (lower is better)
Translates to: SHWKGEWRCQFP*RSLSSEHGDTQ
Trigger: CTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GTTCACACTCTCCTTGGGACCTGGGGTCATGCGTGCTaGGCAAACCCACCACAGGCACCCTGGCATGGAGAA +
Preference number: 3 (lower is better)
Translates to: VHTLLGTWGHAC*ANPPQAPWHGE
Trigger: TTCTCCATGCCAGGGTGCCTGTGGTGGGTTTGCCCAGCACGCATGACCCCAGGTCCCAAGGAGAGTGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp TGCCCCTGCCCTGTGCACCTCCTGAAGGGCCACGTCTaGGTGATGTCCAGTGTCTGGGCTGATTCTAGGGTA +
Preference number: 3 (lower is better)
Translates to: CPCPVHLLKGHV*VMSSVWADSRV
Trigger: TACCCTAGAATCAGCCCAGACACTGGACATCACCCAGACGTGGCCCTTCAGGAGGTGCACAGGGCAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTaGGAAACTCTTGCAATCAGTGCAGCATGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: AGVGLSPRPLQM*ETLAISAAWRQ
Trigger: CTGCCTCCATGCTGCACTGATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp ACCAGCTGTGGAGCTCAATACAAAATGGCCCTCTGCTaGCCGGGCCCTGACTTCAGCCTGGACACTCGTCCC +
Preference number: 3 (lower is better)
Translates to: TSCGAQYKMALC*PGPDFSLDTRP
Trigger: GGGACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTATTGAGCTCCACAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp CTCCTCAGCACAGGACTTATCAGCGCCTTCAGCGGGTaGACCTGCACCCAAGCTCCCTCTGGTGAACCCTCT +
Preference number: 3 (lower is better)
Translates to: LLSTGLISAFSG*TCTQAPSGEPS
Trigger: AGAGGGTTCACCAGAGGGAGCTTGGGTGCAGGTTCACCCGCTGAAGGCGCTGATAAGTCCTGTGCTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp GTGACCAGCTGTGGAGCTCAATACAAAATGGCCCTCTaGTGGCCGGGCCCTGACTTCAGCCTGGACACTCGT +
Preference number: 3 (lower is better)
Translates to: VTSCGAQYKMAL*WPGPDFSLDTR
Trigger: ACGAGTGTCCAGGCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTATTGAGCTCCACAGCTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CTGGCACTTGGTTCTAGCTCTCACTGGAAGGGTGAGTaGCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: LALGSSSHWKGE*RCQFPWRSLSS
Trigger: GGAGGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CCCACGGTGGGAGCTCCAGTGAGCATGAAGGAGCTTTaGGGTCCCACAGTGTTGGGGTCTCTATGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: PTVGAPVSMKEL*GPTVLGSLWSS
Trigger: GGAAGACCATAGAGACCCCAACACTGTGGGACCCCAAAGCTCCTTCATGCTCACTGGAGCTCCCACCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGAGGTCTCTCTCCATATaGTTCACCCCATTACTGAAC +
Preference number: 3 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVRSLSI*FTPLLN
Trigger: GTTCAGTAATGGGGTGAACAATATGGAGAGAGACCT...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCGTGCTTTCACCTATGTaGGTGGGGCAGGGGGCACAG +
Preference number: 3 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIVLSPM*VGQGAQ
Trigger: CTGTGCCCCCTGCCCCACCAACATAGGTGAAAGCAC...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp GACTCACACTGCACACACGGGGTACCTCAGAACCAGTaGACACACCCTGGACAGGCTCTCACCTTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: DSHCTHGVPQNQ*THPGQALTFQV
Trigger: GACTTGGAAGGTGAGAGCCTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp CTTGGTTCTAGCTCTCACTGGAAGGGTGAGTGGCGCTaGCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCAT +
Preference number: 3 (lower is better)
Translates to: LGSSSHWKGEWR*QFPWRSLSSEH
Trigger: ATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp TGCTGGCCAGGCCAGCAACAGTTCACCTGCCCTACCTaGATCTATCAGACAGCCAGGGATGGCACCAGTCAT +
Preference number: 3 (lower is better)
Translates to: CWPGQQQFTCPT*IYQTARDGTSH
Trigger: ATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGTAGGGCAGGTGAACTGTTGCTGGCCTGGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp ACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCAGTaGAGCATGGAGGCAGAGGGGCTGATTTGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: TASADVGNSCNQ*SMEAEGLIWPG
Trigger: CCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTTTCCCACATCTGCAGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp AAAGTGGTGAATGGGCGGCATCAGGAAGCTAAGCCCTaGCCATCCAGTCTGGCTGGAAGATTCTGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: KVVNGRHQEAKP*PSSLAGRFWLP
Trigger: GGGGAGCCAGAATCTTCCAGCCAGACTGGATGGGCAGGGCTTAGCTTCCTGATGCCGCCCATTCACCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CTAAGCTTCAGGTTCCTCATCCGTCACACGGATGTGTaGCAAAACCACCCAGCCTGGAGGTGCTGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: LSFRFLIRHTDV*QNHPAWRCCCA
Trigger: GGCACAGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGAACCTGAAGCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp CACACCTGCTCAGAGTTCCTTAGAAGCCGGGCTCCTTaGCTTGCTGCCTTGGCTCTGGTGACCTCTGCATTT +
Preference number: 3 (lower is better)
Translates to: HTCSEFLRSRAP*LAALALVTSAF
Trigger: AAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGGCTTCTAAGGAACTCTGAGCAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GAACAGAAATCCCATCAAGAACAGCTGCAGGGAGACTaGGGTCACGGTTTTCAGCTCCTGGCCACTGCGGTC +
Preference number: 3 (lower is better)
Translates to: EQKSHQEQLQGD*GHGFQLLATAV
Trigger: GACCGCAGTGGCCAGGAGCTGAAAACCGTGACCCCAGTCTCCCTGCAGCTGTTCTTGATGGGATTTCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CACACACGGGGTACCTCAGAACCAGTGCACACACCCTaGACAGGCTCTCACCTTCCAAGTCACCTGATACTT +
Preference number: 3 (lower is better)
Translates to: HTRGTSEPVHTP*TGSHLPSHLIL
Trigger: AAGTATCAGGTGACTTGGAAGGTGAGAGCCTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp CCCGTGACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGGTAGGACAGTTTGTTaGAGCTACACATCCCACTTA +
Preference number: 3 (lower is better)
Translates to: PVTHTAHTGYLRTSAHTLGRTVC*SYTSHL
Trigger: TAAGTGGGATGTGTAGCTCAAACAAACTGTCCTACC...CAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCAAACGAAGCATCCCATaGATTGGCCTTGAAACATCA +
Preference number: 3 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIKRSIP*IGLETS
Trigger: TGATGTTTCAAGGCCAATCAATGGGATGCTTCGTTT...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CACCTGCCCTACCTGCATCTATCAGACAGCCAGGGATaGCACCAGTCATTCACCTATACATCCTTATCCTAT +
Preference number: 3 (lower is better)
Translates to: HLPYLHLSDSQG*HQSFTYTSLSY
Trigger: ATAGGATAAGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGTAGGGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTGGTGAACCCTCTCGCTaGCAGAGCACCCCCTTAGTC +
Preference number: 3 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALGEPSR*QSTPLV
Trigger: GACTAAGGGGGTGCTCTGCAAGCGAGAGGGTTCACC...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR-3UTR CAA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGAAGAGAGAGTTCCTGTaGCTGGAGAAAACGAAGCAT +
Preference number: 3 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMKREFL*LEKTKH
Trigger: ATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCTT...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp TTGCTGGAGAAAACGAAGCATCCCATTGATTGGCCTTaGAACATCAATCCCCAGTACTCCGGGCCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: LLEKTKHPIDWP*NINPQYSGPWK
Trigger: TTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAATGGGATGCTTCGTTTTCTCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR TCA 72 bp AGAGTTCCTGTTGCTGGAGAAAACGAAGCATCCCATTaGTTGGCCTTGAAACATCAATCCCCAGTACTCCGG +
Preference number: 3 (lower is better)
Translates to: RVPVAGENEASH*LALKHQSPVLR
Trigger: CCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAATGGGATGCTTCGTTTTCTCCAGCAACAGGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR GCA 72 bp ATGGCACCAGTCATTCACCTATACATCCTTATCCTATaGTTTCAGCCACGTGTCCTCTGGAAGGAAATCCCC +
Preference number: 3 (lower is better)
Translates to: MAPVIHLYILIL*FQPRVLWKEIP
Trigger: GGGGATTTCCTTCCAGAGGACACGTGGCTGAAAGCATAGGATAAGGATGTATAGGTGAATGACTGGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp CTGGCAGCAAAGGTGAAAAGAGAGAGTTCCTGTTGCTaGAGAAAACGAAGCATCCCATTGATTGGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: LAAKVKRESSCC*RKRSIPLIGLE
Trigger: TTCAAGGCCAATCAATGGGATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCTTTTCACCTTTGCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CCA 72 bp GGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTaGAACAAGGCTCATGTTTACCTACAATGCACTTTG +
Preference number: 3 (lower is better)
Translates to: GNRAYVPMYFEH*NKAHVYLQCTL
Trigger: CAAAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCTGGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCACGTGGCCGCCACAGCCCCTGCGTaGTCAGGGCACCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGHPATCWPCLDHKDHVAATAPA*SGHRQG
Trigger: GCCCTGCCGGTGCCCTGACCACGCAGGGGCTGTGGC...GGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGGACGCTGCAGAGGCTaGCACCCGCATCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCGRCRG*HPHPEP
Trigger: AGGCTCTGGATGCGGGTGCCAGCCTCTGCAGCGTCC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGACACTCAGGCAGCGTaGCGTGAGGGAAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCDTQAA*REGSRR
Trigger: CCGCCTGCTTCCCTCACGCCACGCTGCCTGAGTGTC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GCTGGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCACGTGGCCGCTGAGGAGAGGCCCTaGCTTCACCACCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGHPATCWPCLDHKDHVAAEERP*LHHPGL
Trigger: GAGGCCTGGGTGGTGAAGGCAGGGCCTCTCCTCAGC...GGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGAGGGAGGGACGGGCCTaGCCCTGCCCTGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGREGRA*PCPVHL
Trigger: GAGGTGCACAGGGCAGGGGCAGGCCCGTCCCTCCCT...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCCTCACCCACCCCGCGTCTGCACTGTGGGCAGAGCAAAGCCTACCAAGCACCAGCCGGTGCAGGTGCTaGAAGGCCCCGTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLTHPASALWAEQSLPSTSRCRC*KAPSGR
Trigger: CCTCCCGGACGGGGCCTTCCAGCACCTGCACCGGCT...GGTGCTTGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCCTCACCCACCCCGCGTCTGCACTGTGGGCAGAGCAAAGCCTACCAAGCACCCCAGGCCCGCGAAGGTaGCGGAGCCGATGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PLTHPASALWAEQSLPSTPGPRR*RSRWPR
Trigger: TCGAGGCCATCGGCTCCGCCACCTTCGCGGGCCTGG...GGTGCTTGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCTGGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCACGTGGCCCCGTGTGGGAGAGGCTaGCATGGTGGAAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AGHPATCWPCLDHKDHVAPCGRG*HGGRRR
Trigger: CCGCCTCCTTCCACCATGCCAGCCTCTCCCACACGG...GGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCCTCACCCACCCCGCGTCTGCACTGTGGGCAGAGCAAAGCCTACCAAGCACCGACACCGGCACAGGCTaGGCCAGCAGCATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLTHPASALWAEQSLPSTDTGTG*ASSMAR
Trigger: GCGGGCCATGCTGCTGGCCCAGCCTGTGCCGGTGTC...GGTGCTTGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCTCACTCACCCACAGCTaGCAGCACAACCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCSLTHS*QHNPLP
Trigger: GGGGAGTGGGTTGTGCTGGCAGCTGTGGGTGAGTGA...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCTGGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCACGTGGCCACGTCTGTGGTCCTGTaGGGGACGCTGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGHPATCWPCLDHKDHVATSVVL*GTLQRL
Trigger: CAGCCTCTGCAGCGTCCCCCACAGGACCACAGACGT...GGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCTGGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCACGTGGCCGGCAGCTCATGGACCTaGCTGAGCTCACAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGHPATCWPCLDHKDHVAGSSWT*LSSQCR
Trigger: CCTGCACTGTGAGCTCAGTCAGGTCCATGAGCTGCC...GGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCAAGGGCACCCCAAAATaGGAGATGGGACTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCKGTPK*EMGLAG
Trigger: GCCAGCCAGTCCCATCTCGCATTTTGGGGTGCCCTT...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTCAGTGCAGTCCACTCTaGCAGCTCTGCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPQCSPL*QLCAAA
Trigger: CGCCGCCGCGCAGAGCTGCCAGAGTGGACTGCACTG...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCCGTCACACGGATGTGTaGCAAAACCACCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCRHTDV*QNHPAW
Trigger: CCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACG...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGCTGCTGTCTTCCCCTaGGCAAGCTACCCTGGACTT +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCAAVFP*ASYPGL
Trigger: AAGTCCAGGGTAGCTTGCCCAGGGGAAGACAGCAGC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTGAGCTGAGATCGCCCTaGGGCAGGGCCTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPELRSP*GRASRI
Trigger: GATGCGGGAGGCCCTGCCCCAGGGCGATCTCAGCTC...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp CCACACCAGCACGGGTGCACCCCCGGGGGCTGGCACTaGGTTCTAGCTCTCACTGGAAGGGTGAGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: PHQHGCTPGGWH*VLALTGRVSGA
Trigger: AGCGCCACTCACCCTTCCAGTGAGAGCTAGAACCAAGTGCCAGCCCCCGGGGGTGCACCCGTGCTGGTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp GGAAGGGGAGGGCTGTACCCCGGGAGCGCTGAGGACTaGCAAGCACCCACGGTGGGAGCTCCAGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: GRGGLYPGSAED*QAPTVGAPVSM
Trigger: CATGCTCACTGGAGCTCCCACCGTGGGTGCTTGCAAGTCCTCAGCGCTCCCGGGGTACAGCCCTCCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTGTGCCCATCCTGACCTaGCCTGGGGACGGGGACACG +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTVPILT*PGDGDT
Trigger: CGTGTCCCCGTCCCCAGGTCAGGTCAGGATGGGCAC...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGAGGCTCTGCCTCCCATaGTGCCCAGGTAGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGRLCLP*CPGRFP
Trigger: CGGGAACCTACCTGGGCATCATGGGAGGCAGAGCCT...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTCCCCCACATCCTCCATaGGGGGACCTGCCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPPPHPP*GDLPRA
Trigger: CGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGG...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGTACCTCAGAACCAGTaGACACACCCTGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCVPQNQ*THPGQA
Trigger: AGCCTGTCCAGGGTGTGTGCACTGGTTCTGAGGTAC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGCCACACCAGCACGGGTaGACCCCCGGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GCTCSHLGCKELSHRERRPHQHG*TPGGWH
Trigger: GTGCCAGCCCCCGGGGGTGCACCCGTGCTGGTGTGG...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTGCATGGCCACGTCTGTaGTCCTGTGGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPAWPRL*SCGGRC
Trigger: GCAGCGTCCCCCACAGGACCACAGACGTGGCCATGC...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCCTCACCCACCCCGCGTCTGCACTGTGGGCAGAGCAAAGCCTACCAAGCACCCGAGATGGGACTGGCTaGCACCCACAGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: PLTHPASALWAEQSLPSTRDGTG*HPQDTG
Trigger: CCCTGTGTCCTGTGGGTGCCAGCCAGTCCCATCTCG...GGTGCTTGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGGGGGCTGATTTGGCCTaGGCATCCCAACGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGGADLA*ASQRAA
Trigger: TGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCC...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTCCGTGCTATGTGCTGTaGGGCCAGCTGCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPPCYVL*GQLPPS
Trigger: GCTGGGAGGCAGCTGGCCCCACAGCACATAGCACGG...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTACAGATCCAGCTCCCTaGGCCGGTGCAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPTDPAP*AGAGAG
Trigger: TCCAGCACCTGCACCGGCTCAGGGAGCTGGATCTGT...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTTCAGGCAGCGTGGCGTaGGGGAAGCAGGCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERSGSVA*GKQAEP
Trigger: AGGCTCCGCCTGCTTCCCTCACGCCACGCTGCCTGA...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGGCTCATGGACCTGACTaGGCTCACAGTGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGAHGPD*AHSAGD
Trigger: GTCCCCTGCACTGTGAGCTCAGTCAGGTCCATGAGC...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCCCCCAGGGCCCTTCATaGGAGGAGCCTCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGPQGPS*EEPPHS
Trigger: TGAGTGAGGAGGCTCCTCTCATGAAGGGCCCTGGGG...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTCTGAGCCGGTGCAGGTaGTGGAAGGCCCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAALSRCR*WKAPSG
Trigger: CCCGGACGGGGCCTTCCAGCACCTGCACCGGCTCAG...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTTGGAGGCGGGGGCGCTaGGCAGAGACTTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPWRRGR*AETSGT
Trigger: AGTACCTGAAGTCTCTGCCCAGCGCCCCCGCCTCCA...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCTGCACCCCCGGGGGCTaGCACTTGGTTCTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGCTPGG*HLVLAL
Trigger: GAGAGCTAGAACCAAGTGCCAGCCCCCGGGGGTGCA...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCCCATCCAGTCTGGCTaGAAGATTCTGGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGPIQSG*KILAPR
Trigger: CCGGGGAGCCAGAATCTTCCAGCCAGACTGGATGGG...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTGGAGAGGGCCCGGCCTaGGCTCCTCTCCTAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTGEGPA*APLLGL
Trigger: TAACCCTAGGAGAGGAGCCCAGGCCGGGCCCTCTCC...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCCACCCCACCAGGGATaGTCCTGTGGATCAGGATGG +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGPPHQG*SCGSGW
Trigger: CCATCCTGATCCACAGGACCATCCCTGGTGGGGTGG...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTGCCTGGGAGTCTCCCTaGCCTCAGTGGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTAWESP*PQWPSC
Trigger: GCAGGAAGGCCACTGAGGCCAGGGAGACTCCCAGGC...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTGGCCTGCGCCGTGAGTaGGCCTGGGAGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAGLRRE*AWESPW
Trigger: CCAGGGAGACTCCCAGGCCCACTCACGGCGCAGGCC...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTCTCTGTGGCGGGAGGTaGTCCCCGGTTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERLCGGR*SPVPLL
Trigger: CAGGAGGGGAACCGGGGACCACCTCCCGCCACAGAG...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGCTGGGCCAGCAGCATaGCCCGCTCACACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNAGPAA*PAHTCL
Trigger: GAGGCAGGTGTGAGCGGGCCATGCTGCTGGCCCAGC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCCCGCATCCAGAGCCTaGACCAGAGGCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTPASRA*TRGFPT
Trigger: TGTGGGGAAGCCTCTGGTTCAGGCTCTGGATGCGGG...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTAGCGCCTTCAGCGGGTaGACCTGCACCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERSAFSG*TCTQAP
Trigger: GGGAGCTTGGGTGCAGGTTCACCCGCTGAAGGCGCT...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGCACGAAGAGCTTTACTaGGGGCTCACAGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVHEELY*GLTEGP
Trigger: CGGCCCTTCTGTGAGCCCTCAGTAAAGCTCTTCGTG...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGATGAAACCGCCATCCTaGCCCGCTGGGAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVMKPPS*PAGRSS
Trigger: ACTGCTTCTCCCAGCGGGGCAGGATGGCGGTTTCAT...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGAGCTCCCTGAGCCGGTaGAGGTGCTGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWSSLSR*RCWKAP
Trigger: CGGGGCCTTCCAGCACCTGCACCGGCTCAGGGAGCT...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGGCGGAGCCTGGGGCTaGCTCCACTCATACACTGGG +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNGGAWG*LHSYTG
Trigger: CCCAGTGTATGAGTGGAGGCAGCCCCAGGCTCCGCC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGCTCGTCCCCATGTCCTaGCCAGATGATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVLVPMS*PDDHWA
Trigger: TGCCCAGTGATCATCTGGGCAGGACATGGGGACGAG...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CCCGTGACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGCCCTCCGTGCTATGTaGTGTGGGGCCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PVTHTAHTGYLRTSAHTLALRAM*CGASCL
Trigger: GAGGCAGCTGGCCCCACAGCACATAGCACGGAGGGC...CAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCGTGACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGCATCCTGACCTGACCTaGGGACGGGGACACGCGAGC +
Preference number: 4 (lower is better)
Translates to: PVTHTAHTGYLRTSAHTLHPDLT*GRGHAS
Trigger: GCTCGCGTGTCCCCGTCCCCAGGTCAGGTCAGGATG...CAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGTCCTGCACTGAGGTGTaGCAGGCGATCTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVSCTEV*QAISST
Trigger: TGTGGACGAGATCGCCTGCCACACCTCAGTGCAGGA...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCCGCTGCCAGTTTCCGTaGAGGTCTCTGTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGRCQFP*RSLSSE
Trigger: CTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCG...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCATGCTGGCCCTGCCTaGACCACAAGGACCACGTGG +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTHAGPA*TTRTTW
Trigger: CCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATG...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCAAAATGGCCCTCTGCTaGCCGGGCCCTGACTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGKMALC*PGPDFS
Trigger: GCTGAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTT...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCGCACGGTGCCCATCCTaGCCTGACCTGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIARCPS*PDLGTG
Trigger: CCCCGTCCCCAGGTCAGGTCAGGATGGGCACCGTGC...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTACCAGCCGAACATGGTaGCCAGCATGGCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTTSRTW*PAWPRL
Trigger: CAGACGTGGCCATGCTGGTCACCATGTTCGGCTGGT...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCGAGCACACATGGCTGTaGCACCTGCCTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGEHTWL*HLPQGR
Trigger: TCTTCCCTGAGGCAGGTGTCACAGCCATGTGTGCTC...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGACTCCAGACCCTGTCTaGTGGGCCGTGCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: RAAGPRVHMLTSGLQRTETPDPV*WAVHVC
Trigger: GCAGACGTGCACGGCCCATCAGACAGGGTCTGGAGT...CTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGAAGGCCCCGCAAGCTaGAGAAGACAGCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNEGPAS*RRQPQP
Trigger: GGGCTGTGGCTGTCTTCTGCAGCTTGCGGGGCCTTC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGAGGGCGCACTCGCAGTaGAGGGGGTTGTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWRAHSQ*RGLWDR
Trigger: CCTGTCCCACAACCCCCTGCACTGCGAGTGCGCCCT...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCTGGCCCGCTCACACCTaGCTCTCCAGGTTACACAGT +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGWPAHT*LSRLHS
Trigger: ACTGTGTAACCTGGAGAGGCAGGTGTGAGCGGGCCA...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGCCATCCTGCCCCGCTaGGAGAAGCAGTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNAILPR*EKQCSP
Trigger: TGGACTGCACTGCTTCTCCCAGCGGGGCAGGATGGC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGCCTGGGGATGGAGCTaGTTTCCGCAGGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNAWGWS*FPQARP
Trigger: AGGCCTTGCCTGCGGAAACCAGCTCCATCCCCAGGC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTTCAGGAGCACGGTGTTaGCCGGGATGTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERSGARC*PGCPRG
Trigger: TCCCCGAGGACATCCCGGCCAACACCGTGCTCCTGA...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTGAGAGGCTGGCATGGTaGAAGGAGGCGGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPERLAW*KEAECH
Trigger: GTGACATTCCGCCTCCTTCCACCATGCCAGCCTCTC...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTGAAGCAGGCGGAGCCTaGGGCTGCCTCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQEREAGGA*GCLHSY
Trigger: GTATGAGTGGAGGCAGCCCCAGGCTCCGCCTGCTTC...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTCACCCCGCCACATGCTaGCCCTGCCTGGACCACAAG +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAHPATC*PCLDHK
Trigger: CTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTG...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCAATGCGAGATGGGACTaGCTGGCACCCACAGGACAC +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGNARWD*LAPTGH
Trigger: GTGTCCTGTGGGTGCCAGCCAGTCCCATCTCGCATT...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCTCTGGGCAGGCATCTaGGGCTCCAAAGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTLWAGI*GSKAQQ
Trigger: CTGTTGGGCTTTGGAGCCCCAGATGCCTGCCCAGAG...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp CTGCCTTCACCACCCAGGCCTCAGTTCACACTCTCCTaGGGACCTGGGGTCATGCGTGCTGGGCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: LPSPPRPQFTLS*GPGVMRAGQTH
Trigger: GTGGGTTTGCCCAGCACGCATGACCCCAGGTCCCAAGGAGAGTGTGAACTGAGGCCTGGGTGGTGAAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp TTGCAATCAGTGCAGCATGGAGGCAGAGGGGCTGATTaGGCCTGGGCATCCCAACGGGCAGCAGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSVQHGGRGAD*AWASQRAAGPR
Trigger: CCTGGGACCTGCTGCCCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCCTCCATGCTGCACTGATTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCGCTGCCAGTTTCCGTGGAGGTCTCTGTCCTCCGAGCATGGCGACACTCAGGCACCCCCTTAGTCCTCTaGGTGCATATCCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALPVSVEVSVLRAWRHSGTPLVL*VHIHSL
Trigger: CAGGCTGTGGATATGCACTCAGAGGACTAAGGGGGT...GCCTGAGTGTCGCCATGCTCGGAGGACAGAGACCTCCACGGAAACTGGCAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCTGGCTGGTGTGGGGCTaGGCCCACGGCCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIWLVWG*AHGLCR
Trigger: TCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCCA...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCCCCAGGTATGTGGCTaGTGTCTTCCCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNPQVCG*CLPLGK
Trigger: CTTGCCCAGGGGAAGACAGCAGCCACATACCTGGGG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGCCCCGTGACTCACACTaGACACACGGGGTACCTCAG +
Preference number: 4 (lower is better)
Translates to: RAAGPRVHMLTSGLQRTEPRDSH*THGVPQ
Trigger: CTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGGG...CTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGTGCCCAGGGCGTCCTTaGGGATCCTCTGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: GCTCSHLGCKELSHRERRCPGRP*GSSGCG
Trigger: ACCGCATCCAGAGGATCCCCAAGGACGCCCTGGGCA...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCGTGACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGCAGTGCAGGGGGTTGTaGGACAGGCGTATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: PVTHTAHTGYLRTSAHTLQCRGL*DRRILA
Trigger: CGCCAAGATACGCCTGTCCCACAACCCCCTGCACTG...CAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATTGGGGTCATGCGTGCTaGGCAAACCCACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNWGHAC*ANPPQA
Trigger: TGCCTGTGGTGGGTTTGCCCAGCACGCATGACCCCA...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCCACTGGTGGCCTGGCTaGTGTGGGGCTGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIHWWPG*CGAEPT
Trigger: CGTGGGCTCAGCCCCACACCAGCCAGGCCACCAGTG...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp TTGCCTTGCTGCCTTGGCTCTGGTGACCTCTGCATTTaGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAG +
Preference number: 4 (lower is better)
Translates to: LPCCLGSGDLCI*QTPGRSCPRRQ
Trigger: CTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTTTATCCAACCAGACATaGAACCGCCATCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTLSNQT*NRHPAP
Trigger: CGGGGCAGGATGGCGGTTTCATGTCTGGTTGGATAA...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGAAACTCCTCCTGCACTaGGGTGTGGCAGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: RAAGPRVHMLTSGLQRTEKLLLH*GVAGDL
Trigger: GAGATCGCCTGCCACACCTCAGTGCAGGAGGAGTTT...CTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTCACCTACTACAAAAGTaGCAGCAGCCACCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAHLLQK*QQPPAG
Trigger: CCCCGCCGGTGGCTGCTGTCACTTTTGTAGTAGGTG...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCAACGAAGCATCCCATTaGTTGGCCTTGAAACATCAA +
Preference number: 4 (lower is better)
Translates to: ERPGLRAALRAMCCGASCNEASH*LALKHQ
Trigger: TTGATGTTTCAAGGCCAATCAATGGGATGCTTCGTT...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTGTCCACACTGTGAACTaGGACATTCCCTTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPVHTVN*DIPFVP
Trigger: GGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGAC...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGCCCACAAACTCCTCCTaGACTGAGGTGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWPTNSS*TEVWQA
Trigger: CGCCTGCCACACCTCAGTGCAGGAGGAGTTTGTGGG...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCTCCTGTGGGGGACGCTaGAGAGGCTGGCACCCGCAT +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAISCGGR*RGWHPH
Trigger: ATGCGGGTGCCAGCCTCTGCAGCGTCCCCCACAGGA...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGGCTGCTGTGCCTGAGTaGAACAGTGGGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: RAAGPRVHMLTSGLQRTEAAVPE*NSGEHT
Trigger: TGTGTGCTCCCCACTGTTGCACTCAGGCACAGCAGC...CTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGACCTGGGGTCATGCGTaGTGGGCAAACCCACCACAG +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWTWGHA*WANPPQ
Trigger: CTGTGGTGGGTTTGCCCAGCACGCATGACCCCAGGT...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTGGCTCCTTGCCTTGCTaGCTTGGCTCTGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAGSLPC*LGSGDL
Trigger: GAGGTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCC...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGACAGAGAAGCCGGGCTCCTTaGCTTGCTGCCTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DSHCTHGVPQNQCTHPGQRSRAP*LAALAL
Trigger: CAGAGCCAAGGCAGCAAGGCAAGGAGCCCGGCTTCT...CTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGGTAAGGCCAGGACGGTaGGCAGCTCATGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: GCTCSHLGCKELSHRERRVRPGR*AAHGPD
Trigger: GTCAGGTCCATGAGCTGCCCACCGTCCTGGCCTTAC...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGCGCTATCAACACTGGTaGCCTGGCTGGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GCTCSHLGCKELSHRERRRYQHW*PGWCGA
Trigger: AGCCCCACACCAGCCAGGCCACCAGTGTTGATAGCG...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGTCCTCGGGGACCTCCTaGAGGCCCCGCAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMSSGTS*RPRKLQ
Trigger: CTGCAGCTTGCGGGGCCTTCAGGAGGTCCCCGAGGA...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGGCAGCAGAAGTGATTaGGCCTGGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNGSRSD*AWEAKV
Trigger: AACCTTTGCCTCCCAGGCTCAATCACTTCTGCTGCC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCCCATTGATTGGCCTTaGAACATCAATCCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGPIDWP*NINPQY
Trigger: GTACTGGGGATTGATGTTTCAAGGCCAATCAATGGG...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTCATGGCTGTGACACCTaGCTCAGGGAAGAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTHGCDT*LREEQK
Trigger: CTTTTGCTCTTCCCTGAGGCAGGTGTCACAGCCATG...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTAAGGGTGAGTGGCGCTaGCAGTTTCCGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAKGEWR*QFPWRS
Trigger: AGACCTCCACGGAAACTGGCAGCGCCACTCACCCTT...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTCCTGCCAGCAGCCCCTaGAGAGGAGGCCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPPASSP*RGGRGS
Trigger: AGACCCCCGGCCTCCTCTGCAGGGGCTGCTGGCAGG...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAAGGCCGATGGGGTCCTTaGAGGCGGGGGCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQGRWGP*RRGRWA
Trigger: TGCCCAGCGCCCCCGCCTCCAAGGACCCCATCGGCC...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCCGTGACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGCTGGGCAAGCTACCCTaGACTTTTCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PVTHTAHTGYLRTSAHTLLGKLP*TFPRSL
Trigger: GAGAGACCTGGGAAAAGTCCAGGGTAGCTTGCCCAG...CAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGACAGCTGAAGGGCCACGTCTaGGTGATGTCCAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSHCTHGVPQNQCTHPGQLKGHV*VMSSVW
Trigger: CCAGACACTGGACATCACCCAGACGTGGCCCTTCAG...CTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTGGGGTCCCACAGTGTTaGGGTCTCTATGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERGVPQC*GLYGLP
Trigger: AGGAAGACCATAGAGACCCCAACACTGTGGGACCCC...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCAGAGGCGGGGTGCTCTaGGGCAGGCAGCGATGTCAT +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIRGGVL*GRQRCH
Trigger: ATGACATCGCTGCCTGCCCCAGAGCACCCCGCCTCT...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCGCACAAGGAAGCCTCTaGGCAGGCATCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIAQGSL*AGIWGS
Trigger: GGAGCCCCAGATGCCTGCCCAGAGGCTTCCTTGTGC...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATTCAGGATGGCTCTGCTaGTGGCTATACCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNSGWLC*WLYQLW
Trigger: CCAGAGCTGGTATAGCCACCAGCAGAGCCATCCTGA...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGACGGTTTTCAGCTCCTaGCCACTGCGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWTVFSS*PLRSRK
Trigger: CTTCCTGGACCGCAGTGGCCAGGAGCTGAAAACCGT...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GCAGGAGGTGGACAGGGGCCCAGCAGACCTTCACCAAGGAGAAGGCCAGACCCTTCCTGGCAGCAAAGGTaGAAAGAGAGAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: AGGGQGPSRPSPRRRPDPSWQQR*KERVPV
Trigger: AACAGGAACTCTCTCTTTTCACCTTTGCTGCCAGGA...AGGGTCTGGCCTTCTCCTTGGTGAAGGTCTGCTGGGCCCCTGTCCACCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCCCTCAGTGGCCTTCCTaGCCCAGGGGGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIPQWPS*PRGPHP
Trigger: GGGGTGGGGCCCCCTGGGGCAGGAAGGCCACTGAGG...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTGTGACCTCTGCATTTTaGAGACACCCGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAVTSAF*RHPGGA
Trigger: AGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCAC...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCCAGCCACGTGTCCTCTaGAAGGAAATCCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIQPRVL*KEIPTG
Trigger: GCCCGTGGGGATTTCCTTCCAGAGGACACGTGGCTG...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGTGCTTTCACCTATGTTaGTGGGGCAGGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWCFHLC*WGRGHS
Trigger: ACTGTGCCCCCTGCCCCACCAACATAGGTGAAAGCA...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTAAAGAGGTCACAAGATaGGAGAGGAGGGGACGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAKEVTR*ERRGRQ
Trigger: CTGCCGTCCCCTCCTCTCCCATCTTGTGACCTCTTT...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTTCCAGCCAGCTCCTGTaGGGCCTGCGCCGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPSSQLL*GLRREW
Trigger: CCACTCACGGCGCAGGCCCCACAGGAGCTGGCTGGA...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp ACCCACGGTGGGAGCTCCAGTGAGCATGAAGGAGCTTaGGGGTCCCACAGTGTTGGGGTCTCTATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: THGGSSSEHEGA*GSHSVGVSMVF
Trigger: GAAGACCATAGAGACCCCAACACTGTGGGACCCCAAAGCTCCTTCATGCTCACTGGAGCTCCCACCGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGATGGACAGCCCGGGTTaGAGTTCCACTGGGATAATT +
Preference number: 4 (lower is better)
Translates to: RAAGPRVHMLTSGLQRTEMDSPG*SSTGII
Trigger: AATTATCCCAGTGGAACTTCAACCCGGGCTGTCCAT...CTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACGTACCCCGGGAGCGCTaGGGACTTGCAAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDVPRER*GLASTH
Trigger: GTGGGTGCTTGCAAGTCCTCAGCGCTCCCGGGGTAC...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAAGACAGCCACAGCCCCTaGGTGGTCAGGGCACCGGCA +
Preference number: 4 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQDSHSP*VVRAPA
Trigger: TGCCGGTGCCCTGACCACGCAGGGGCTGTGGCTGTC...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGTGGGGATCCTCTGGATaGGGTTGTAAGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWWGSSG*GCKTGP
Trigger: TGGACCTGTCTTACAACCGCATCCAGAGGATCCCCA...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAATCCCACAGGGCCTCCTaGAGGGCGCACTCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQSHRAS*RAHSQC
Trigger: GCACTGCGAGTGCGCCCTGCAGGAGGCCCTGTGGGA...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTACACCCGGGAGGAGCTaGCCAAGACGGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRATPGRS*PRRQPH
Trigger: GTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGT...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCGAGCGAGGGGCGAGGTaGGCGCACGGTGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIERGAR*AHGAHP
Trigger: AGGATGGGCACCGTGCGCCCACCTCGCCCCTCGCTC...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTCTGCAGGGCCCCGTGTaGGAGAGGCTGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRALQGPV*ERLAWW
Trigger: CCACCATGCCAGCCTCTCCCACACGGGGCCCTGCAG...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTTCCTGTGGATCAGGATaGCTCTGCTGGTGGCTATAC +
Preference number: 4 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAASCGSG*LCWWLY
Trigger: GTATAGCCACCAGCAGAGCCATCCTGATCCACAGGA...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTGGCGTATCTTGGCGCTaGGTTTGCCCAGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPGVSWR*VCPGRP
Trigger: AGGACGCCCTGGGCAAACTCAGCGCCAAGATACGCC...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTACCATGTCCACACTGTaGACTGAGACATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERTMSTL*TETFPL
Trigger: CAAAGGGAATGTCTCAGTTCACAGTGTGGACATGGT...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATACATTCCACAGAATGTaGCCAGCTGTGGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNTFHRM*PAVELN
Trigger: ATTGAGCTCCACAGCTGGTCACATTCTGTGGAATGT...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTTGGTCTCTGTTACTTTaGTCTGGAAACAGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTWSLLL*SGNRAY
Trigger: GTAAGCCCTGTTTCCAGAGCAAAGTAACAGAGACCA...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACCACCCACCCCGCGTCTaGACTGTGGGCAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDHPPRV*TVGRAK
Trigger: CTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTG...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGATGTCATCTCAGGGGTaGTCCGCCACCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMMSSQG*SATPPS
Trigger: GGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACAT...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTCCGGGCTCCTTGCCTTaGTGCCTTGGCTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPPGSLP*CLGSGD
Trigger: GTCACCAGAGCCAAGGCAGCAAGGCAAGGAGCCCGG...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACACCGCGCCGCCCTCCGTaGTATGTGCTGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTPRRPP*YVLWGQ
Trigger: CTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGG...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGCCCGCGTCTGCACTGTaGGCAGAGCAAAGCCTACCA +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMPASAL*AEQSLP
Trigger: TGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGG...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGTCTGTCCTCCGAGCATaGCGACACTCAGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMSVLRA*RHSGSV
Trigger: CACGCTGCCTGAGTGTCGCCATGCTCGGAGGACAGA...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACCCACCACAGGCACCCTaGCATGGAGAAGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDPPQAP*HGEGVA
Trigger: TGCCACCCCTTCTCCATGCCAGGGTGCCTGTGGTGG...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGCGGCCTCTGCAGATGTaGGAAACTCTTGCAATCAGT +
Preference number: 4 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWRPLQM*ETLAIS
Trigger: ACTGATTGCAAGAGTTTCCCACATCTGCAGAGGCCG...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTCTGCATTTTGCAGACACCCGGGAGGAGCTGCCCAAGACGGCAGCCCCACTGAATGTGACCAGCTGTaGAGCTCAATACAAAATGGC +
Preference number: 4 (lower is better)
Translates to: TSAFCRHPGGAAQDGSPTECDQL*SSIQNG
Trigger: GCCATTTTGTATTGAGCTCCACAGCTGGTCACATTC...AGTGGGGCTGCCGTCTTGGGCAGCTCCTCCCGGGTGTCTGCAAAATGCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATGCACTAAATTATCTCTaGGATTCCTGGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNALNYL*DSWQQR
Trigger: CCTTTGCTGCCAGGAATCTCAGAGATAATTTAGTGC...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACCAGGCCTAAGCCAATCCCCCACATCCTCCATGAGGGGACCTGCCAAGAGCGTAGAGAGAGTTCCTGTTaGTGGAGAAAACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: TRPKPIPHILHEGTCQERRESSC*WRKRSI
Trigger: GATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCT...ACGCTCTTGGCAGGTCCCCTCATGGAGGATGTGGGGGATTGGCTTAGGCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACGGACGGGCCTGCCCCTaGCCTGTGCACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SQVSLHIVHPITELKFWHGRACP*PVHLLK
Trigger: CTTCAGGAGGTGCACAGGGCAGGGGCAGGCCCGTCC...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTGGAGCGCTGAGGACTTaGAAGCACCCACGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRAGALRT*KHPRWE
Trigger: CTCCCACCGTGGGTGCTTGCAAGTCCTCAGCGCTCC...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCGCCATGGACCACACCTaGTCAGAGTTCCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIAMDHT*SEFLRS
Trigger: GCTTCTAAGGAACTCTGAGCAGGTGTGGTCCATGGC...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATTCTGTTACTTTGCTCTaGAAACAGGGCTTACGTTCC +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNSVTLL*KQGLRS
Trigger: GGAACGTAAGCCCTGTTTCCAGAGCAAAGTAACAGA...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTACCACAAGGACCACGTaGCCCCACACCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRATTRTT*PHTSTG
Trigger: ACCCGTGCTGGTGTGGGGCCACGTGGTCCTTGTGGT...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCAGCCCAGCAAATTaGGGCAGGGAGGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQGSPAN*GREGRA
Trigger: GGCCCGTCCCTCCCTGCCCCAATTTGCTGGGCTGCC...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTCGCAAGTGTCCATCATaGGCTCCAGGCCCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRARKCPS*APGPAS
Trigger: ACTGGCGGGGCCTGGAGCCCATGATGGACACTTGCG...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTCACCGCTATCAACACTaGTGGCCTGGCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPHRYQH*WPGWCG
Trigger: CCCACACCAGCCAGGCCACCAGTGTTGATAGCGGTG...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTTGGCTATACCAGCTCTaGGCCCATCCCCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPWLYQL*AHPPLL
Trigger: CAGCAGTGGGGGATGGGCCCAGAGCTGGTATAGCCA...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTGGATGGCTCTGCTGGTaGCTATACCAGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPGWLCW*LYQLWA
Trigger: GGCCCAGAGCTGGTATAGCCACCAGCAGAGCCATCC...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGTACATCCTTATCCTATaGTTTCAGCCACGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GCTCSHLGCKELSHRERRYILIL*FQPRVL
Trigger: GAGGACACGTGGCTGAAAGCATAGGATAAGGATGTA...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGGGATCAGGATGGCTCTaGTGGTGGCTATACCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMGSGWL*WWLYQL
Trigger: GAGCTGGTATAGCCACCAGCAGAGCCATCCTGATCC...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTAGCTCCTGTGGGGCCTaGGCCGTGAGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALSSCGA*AVSGPG
Trigger: CCCAGGCCCACTCACGGCGCAGGCCCCACAGGAGCT...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAACAACCCACTCCCCACTaGCTGTCACGCAACCCCCGG +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQQPTPH*LSRNPR
Trigger: CCGGGGGTTGCGTGACAGGCAGTGGGGAGTGGGTTG...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCGCTAGGGCCTGGGGATaGAGCTGGTTTCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIARAWG*SWFPQA
Trigger: TGCCTGCGGAAACCAGCTCCATCCCCAGGCCCTAGC...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCAGGTGGCGGAGCCGATaGCCTCGATGGCGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIRWRSR*PRWRCE
Trigger: CTCACAACGCCATCGAGGCCATCGGCTCCGCCACCT...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCCCTCCACTCATACACTaGGCCTGGCCCCTCACCCAC +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIPPLIH*AWPLTH
Trigger: GTGGGTGAGGGGCCAGGCCCAGTGTATGAGTGGAGG...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTCACTGGAAGGGTGAGTaGCGCTGCCAGTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRAHWKGE*RCQFPW
Trigger: CCACGGAAACTGGCAGCGCCACTCACCCTTCCAGTG...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACTCCAAACAGTGGAGCTaGACACCCCGCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDSKQWS*TPRHML
Trigger: CAGCATGTGGCGGGGTGTCCAGCTCCACTGTTTGGA...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACCCCCAAAATGCGAGATaGGACTGGCTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDPQNAR*DWLAPT
Trigger: TGTGGGTGCCAGCCAGTCCCATCTCGCATTTTGGGG...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGATTCTGGCTCCCCGGTaGCCCAGGAGTCACAGAATA +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMILAPR*PRSHRI
Trigger: TATTCTGTGACTCCTGGGCCACCGGGGAGCCAGAAT...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp TGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTaGAAGTTCCACTGGGATAATTTCCTGATGGTATCG +
Preference number: 4 (lower is better)
Translates to: WKEAECHDGQPG*KFHWDNFLMVS
Trigger: CGATACCATCAGGAAATTATCCCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCCCAAGCTCCCTCTGGTaGACCCTCTCGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIPSSLW*TLSLAE
Trigger: CTCTGCAAGCGAGAGGGTTCACCAGAGGGAGCTTGG...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATTGTTCACCCCATTACTaGACTGAAATTTTGGCACTA +
Preference number: 4 (lower is better)
Translates to: GWCGAEPTASADVGNSCNCSPHY*TEILAL
Trigger: TAGTGCCAAAATTTCAGTTCAGTAATGGGGTGAACA...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACCTGCCTTGGCTCTGGTaGCCTCTGCATTTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDLPWLW*PLHFAD
Trigger: GTCTGCAAAATGCAGAGGTCACCAGAGCCAAGGCAG...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTGGCTCTGGTGACCTCTaGATTTTGCAGACACCCGGG +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRAGSGDL*ILQTPG
Trigger: CCCGGGTGTCTGCAAAATGCAGAGGTCACCAGAGCC...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACGCCTCTGCTAGGGCCTaGGGATGGAGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SQVSLHIVHPITELKFWHASARA*GWSWFP
Trigger: CGGAAACCAGCTCCATCCCCAGGCCCTAGCAGAGGC...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGACAAGACTCCCGGGTaGAGACCAGCAGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQDKTPG*RPAGAR
Trigger: CCTCGCTCCTGCTGGTCTCCACCCGGGAGTCTTGTC...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGCCCCGTCCGGGAGGTaGGAGATCTTGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQAPSGR*EILLAS
Trigger: CGATGCCAACAAGATCTCCCACCTCCCGGACGGGGC...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTAGCCGATGGCCTCGATaGCGTTGTGAGACAGATCCA +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPSRWPR*RCETDP
Trigger: TGGATCTGTCTCACAACGCCATCGAGGCCATCGGCT...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCGGCATGGAGAAGGGGTaGCAGGAGGACGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIGMEKG*QEDANH
Trigger: GTGATTGGCGTCCTCCTGCCACCCCTTCTCCATGCC...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTCAGCTGCAGGGAGACTaGGGTCACGGTTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRAQLQGD*GHGFQL
Trigger: GAGCTGAAAACCGTGACCCCAGTCTCCCTGCAGCTG...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACACTCTCACTGGAAGGGTaGGTGGCGCTGCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTLSLEG*VALPVS
Trigger: GGAAACTGGCAGCGCCACTCACCCTTCCAGTGAGAG...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAACATGTCCTGCCCAGATaGTCACTGGGCAGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQHVLPR*SLGRAG
Trigger: TCCGGCTCTGCCCAGTGATCATCTGGGCAGGACATG...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGCTGTGCAAATGCATCTaGCTGGCGAACAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMLCKCI*LANRNP
Trigger: GGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAG...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACATGCATATCCACAGCCTaGAGGGCCCCGTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTCISTA*RAPCGR
Trigger: TCTCCCACACGGGGCCCTGCAGGCTGTGGATATGCA...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTGGTGGGAGATCTTGTTaGCATCGAGCTTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPGGRSC*HRASGA
Trigger: TGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACC...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCACTTCCTCCAAACAGTaGAGCTGGACACCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLITSSKQ*SWTPRH
Trigger: GTGGCGGGGTGTCCAGCTCCACTGTTTGGAGGAAGT...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGGTGATGTCCAGTGTCTaGGCTGATTCTAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMVMSSV*ADSRVR
Trigger: CCTTACCCTAGAATCAGCCCAGACACTGGACATCAC...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTTTTCACCTATGTTGGTaGGGCAGGGGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPFHLCW*GRGHSK
Trigger: CTTACTGTGCCCCCTGCCCCACCAACATAGGTGAAA...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTGATTGGCCTTGAAACATCAATCCCCAGTACTCCGGGCCTTGGAAAAAGAGCTTGCCCAGATGATCACTaGGCAGAGCCGGAGATTCCT +
Preference number: 4 (lower is better)
Translates to: LIGLETSIPSTPGLGKRACPDDH*AEPEIP
Trigger: AGGAATCTCCGGCTCTGCCCAGTGATCATCTGGGCA...AGCTCTTTTTCCAAGGCCCGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGCCCTGACTTCAGCCTaGACACTCGTCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQALTSA*TLVPMS
Trigger: GGACATGGGGACGAGTGTCCAGGCTGAAGTCAGGGC...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCACCCCATTACTGAACTaGAATTTTGGCACTACGGTT +
Preference number: 4 (lower is better)
Translates to: PCPHCELRHSLCPRLTAITPLLN*NFGTTV
Trigger: AACCGTAGTGCCAAAATTTCAGTTCAGTAATGGGGT...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTCAGCAACAGTTCACCTaGCCTACCTGCATCTATCAG +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPQQQFT*PTCIYQ
Trigger: CTGATAGATGCAGGTAGGGCAGGTGAACTGTTGCTG...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACACCCATCAAGAACAGCTaGAGGGAGACTGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTPIKNS*RETGVT
Trigger: CGTGACCCCAGTCTCCCTGCAGCTGTTCTTGATGGG...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACACCAGTGCACACACCCTaGACAGGCTCTCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTPVHTP*TGSHLP
Trigger: TGGAAGGTGAGAGCCTGTCCAGGGTGTGTGCACTGG...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACCTGCATCTATCAGACAGCCAGGGATGGCACCAGTCATTCACCTATACATCCTTCAGACAGCCAGGGATaGCACCAGTCATTCACCTAT +
Preference number: 4 (lower is better)
Translates to: TCIYQTARDGTSHSPIHPSDSQG*HQSFTY
Trigger: ATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGA...AGGATGTATAGGTGAATGACTGGTGCCATCCCTGGCTGTCTGATAGATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTCTGGCTGGAAGATTCTaGCTCCCCGGTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALLAGRF*LPGGPG
Trigger: TCCTGGGCCACCGGGGAGCCAGAATCTTCCAGCCAG...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACGAGTTAGGGTTGGGTTaGGGTTCAGGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQVSLHIVHPITELKFWHELGLG*GSGSAS
Trigger: GGAGGCAGAGCCTGAACCCCAACCCAACCCTAACTC...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACGAGCTCAATACAAAATaGCCCTCTGCTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SQVSLHIVHPITELKFWHELNTK*PSAGRA
Trigger: GGCCCGGCCAGCAGAGGGCCATTTTGTATTGAGCTC...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGACACACAATGTACACTaGTCACTCATTTACACCCCC +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMTHNVH*SLIYTP
Trigger: GGGGGTGTAAATGAGTGATCAGTGTACATTGTGTGT...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAATCCTTAGAGGGGAGGTaGTTTCACCTATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQSLEGR*FHLCWW
Trigger: CCACCAACATAGGTGAAAGCACCTCCCCTCTAAGGA...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGCCGGAGATTCCTGGCTaGTTTGGTTATGAAACACAT +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMPEIPG*FGYETH
Trigger: ATGTGTTTCATAACCAAAGCAGCCAGGAATCTCCGG...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TCCCAGGTCTCTCTCCATATTGTTCACCCCATTACTGAACTGAAATTTTGGCACCTGTCTGATGGGCCGTaGACGTCTGCACATTCCACA +
Preference number: 4 (lower is better)
Translates to: SQVSLHIVHPITELKFWHLSDGP*TSAHST
Trigger: TGTGGAATGTGCAGACGTGCACGGCCCATCAGACAG...GTGCCAAAATTTCAGTTCAGTAATGGGGTGAACAATATGGAGAGAGACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTCTCCATGAGGGGACCTaGCAAGAGCGTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALLHEGT*QERPGL
Trigger: GAGTCCTGGACGCTCTTGGCAGGTCCCCTCATGGAG...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp GGCGAAGCATCTCTACATACCTACACTTCAGTCCACACACAATGTACACTGATCGTGTTGGGGTCTCTATaGTCTTCCTTAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GEASLHTYTSVHTQCTLIVLGSL*SSLEGR
Trigger: CCTCCCCTCTAAGGAAGACCATAGAGACCCCAACAC...GATCAGTGTACATTGTGTGTGGACTGAAGTGTAGGTATGTAGAGATGCTTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAAAGCATGAAGGAGCTTTaGGGTCCCACAGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQSMKEL*GPTVLG
Trigger: CCCCAACACTGTGGGACCCCAAAGCTCCTTCATGCT...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp GAGAGTTCCTGTTGCTGGAGAAAACGAAGCATCCCATaGATTGGCCTTGAAACATCAATCCCCAGTACTCCG +
Preference number: 4 (lower is better)
Translates to: ESSCCWRKRSIP*IGLETSIPSTP
Trigger: CGGAGTACTGGGGATTGATGTTTCAAGGCCAATCAATGGGATGCTTCGTTTTCTCCAGCAACAGGAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR TCA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAGTATCAGGGTTAGGGTaGGGATTGGGTCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTVSGLG*GLGQGL
Trigger: TAACCCCTGACCCAATCCTCACCCTAACCCTGATAC...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTTACAAAATGGCCCTCTaGTGGCCGGGCCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALYKMAL*WPGPDF
Trigger: GAAGTCAGGGCCCGGCCAGCAGAGGGCCATTTTGTA...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGCAGTACTCCGGGCCTTaGAAAAAGAGCTGTTTTATA +
Preference number: 4 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMQYSGP*KKSCFI
Trigger: TATAAAACAGCTCTTTTTCCAAGGCCCGGAGTACTG...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTGGTTCTAGCTCTCACTaGAAGGGTGAGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALGSSSH*KGEWRC
Trigger: GCAGCGCCACTCACCCTTCCAGTGAGAGCTAGAACC...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTCCAGGGATGGTCCTGTaGATCAGGATGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALPGMVL*IRMALL
Trigger: CAGCAGAGCCATCCTGATCCACAGGACCATCCCTGG...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
3UTR CAA 72 bp ATTCCTGGCAGCAAAGGTGAAAAGAGAGAGTTCCTGTaGCTGGAGAAAACGAAGCATCCCATTGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: IPGSKGEKREFL*LEKTKHPIDWP
Trigger: AGGCCAATCAATGGGATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCTTTTCACCTTTGCTGCCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR GCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTAACTCTTGCAATCAGTaGAGCATGGAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALNSCNQ*SMEAEG
Trigger: CCCCTCTGCCTCCATGCTGCACTGATTGCAAGAGTT...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CAGGATCCAAGTCCTGTGCAAATGCATCTGACTGGCGAACAGAAATCCCATCAAATGTACTTCGAACACTaGAACAAGGCTCATGTTTAC +
Preference number: 4 (lower is better)
Translates to: QDPSPVQMHLTGEQKSHQMYFEH*NKAHVY
Trigger: GTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACAT...TTGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGCACAGGACTTGGATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACACTGAACTGAAATTTTaGCACTACGGTTACTCAAAA +
Preference number: 4 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDTELKF*HYGYSK
Trigger: TTTTGAGTAACCGTAGTGCCAAAATTTCAGTTCAGT...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAACTCTCTAGAAAAACCTaGTCTCTGTTACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQLSRKT*SLLLCS
Trigger: AGAGCAAAGTAACAGAGACCAGGTTTTTCTAGAGAG...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CCA 90 bp TTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAATGCACTTGCAAATGCATCTGACTaGCGAACAGAAATCCCATCA +
Preference number: 4 (lower is better)
Translates to: FQCTSNTGTRLMFTYNALANASD*RTEIPS
Trigger: TGATGGGATTTCTGTTCGCCAGTCAGATGCATTTGC...AAGTGCATTGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GCTGGACACCCCGCCACATGCTGGCCCTGCCTGGACCACAAGGACCACGTGGCCGGCAGAGGGGCTGATTaGGCCTGGGCATCCCAACGG +
Preference number: 5 (lower is better)
Translates to: AGHPATCWPCLDHKDHVAGRGAD*AWASQR
Trigger: CCGTTGGGATGCCCAGGCCAAATCAGCCCCTCTGCC...GGCCACGTGGTCCTTGTGGTCCAGGCAGGGCCAGCATGTGGCGGGGTGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCGGTGAACCCTCTCGCTaGCAGAGCACCCCCTTAGTC +
Preference number: 5 (lower is better)
Translates to: ERPGLRAALRAMCCGASCGEPSR*QSTPLV
Trigger: GACTAAGGGGGTGCTCTGCAAGCGAGAGGGTTCACC...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 90 bp TCCCACAGGGCCTCCTGCAGGGCGCACTCGCAGTGCAGGGGGTTGTaGGACAGGCGTATCTTGGCGCTGAGTTTGCCCAGGGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SHRASCRAHSQCRGL*DRRILALSLPRASL
Trigger: CAAGGACGCCCTGGGCAAACTCAGCGCCAAGATACGCCTGTCCCACAACCCCCTGCACTGCGAGTGCGCCCTGCAGGAGGCCCTGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 90 bp GGTGCAGGTGCTGGAAGGCCCCGTCCGGGAGGTGGGAGATCTTGTTaGCATCGAGCTTCAGGAGCACGGTGTTGGCCGGGATGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GAGAGRPRPGGGRSC*HRASGARCWPGCPR
Trigger: CCGAGGACATCCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCCGGACGGGGCCTTCCAGCACCTGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCCCGGGGGCTGGCACTaGGTTCTAGCTCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGPGGWH*VLALTG
Trigger: TCCAGTGAGAGCTAGAACCAAGTGCCAGCCCCCGGG...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS TCA 90 bp GTCCTGTGGGGGACGCTGCAGAGGCTGGCACCCGCATCCAGAGCCTaGACCAGAGGCTTCCCCACAAACTCCTCCTGCACTGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VLWGTLQRLAPASRA*TRGFPTNSSCTEVW
Trigger: CCACACCTCAGTGCAGGAGGAGTTTGTGGGGAAGCCTCTGGTTCAGGCTCTGGATGCGGGTGCCAGCCTCTGCAGCGTCCCCCACAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 90 bp GGAGGTGGGAGATCTTGTTGGCATCGAGCTTCAGGAGCACGGTGTTaGCCGGGATGTCCTCGGGGACCTCCTGAAGGCCCCGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GGGRSCWHRASGARC*PGCPRGPPEGPASC
Trigger: GCAGCTTGCGGGGCCTTCAGGAGGTCCCCGAGGACATCCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 90 bp CCAGCATGGCCACGTCTGTGGTCCTGTGGGGGACGCTGCAGAGGCTaGCACCCGCATCCAGAGCCTGAACCAGAGGCTTCCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: PAWPRLWSCGGRCRG*HPHPEPEPEASPQT
Trigger: AGTTTGTGGGGAAGCCTCTGGTTCAGGCTCTGGATGCGGGTGCCAGCCTCTGCAGCGTCCCCCACAGGACCACAGACGTGGCCATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CCCCTCACCCACCCCGCGTCTGCACTGTGGGCAGAGCAAAGCCTACCAAGCACCTGGGACAGGCGTATCTaGGCGCTGAGTTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PLTHPASALWAEQSLPSTWDRRI*ALSLPR
Trigger: CCTGGGCAAACTCAGCGCCAAGATACGCCTGTCCCA...GGTGCTTGGTAGGCTTTGCTCTGCCCACAGTGCAGACGCGGGGTGGGTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GCCTGGGCATCCCAACGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGGTGCTTTCACCTATGTaGGTGGGGCAGGGGGCACAG +
Preference number: 5 (lower is better)
Translates to: AWASQRAAGPRVHMLTSGVLSPM*VGQGAQ
Trigger: CTGTGCCCCCTGCCCCACCAACATAGGTGAAAGCAC...CCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCGTTGGGATGCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CGGGCAGCAGGTCCCAGGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTTCAGGAGCACGGTGTaGGCCGGGATGTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RAAGPRVHMLTSGLQRTEFRSTV*AGMSSG
Trigger: CCCCGAGGACATCCCGGCCAACACCGTGCTCCTGAA...CTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCCTGGGACCTGCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATATCTTGGCGCTGAGTTaGCCCAGGGCGTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GWCGAEPTASADVGNSCNILALS*PRASLG
Trigger: CCCCAAGGACGCCCTGGGCAAACTCAGCGCCAAGAT...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGGGGAGCGCTGAGGACTaGCAAGCACCCACGGTGGGA +
Preference number: 5 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWGSAED*QAPTVG
Trigger: TCCCACCGTGGGTGCTTGCAAGTCCTCAGCGCTCCC...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GAGCGTCCAGGACTCCGCGCCGCCCTCCGTGCTATGTGCTGTGGGGCCAGCTGCAGATGTGGGAAACTCTaGCAATCAGTGCAGCATGGA +
Preference number: 5 (lower is better)
Translates to: ERPGLRAALRAMCCGASCRCGKL*QSVQHG
Trigger: TCCATGCTGCACTGATTGCAAGAGTTTCCCACATCT...GCAGCTGGCCCCACAGCACATAGCACGGAGGGCGGCGCGGAGTCCTGGACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGCAGGCAGCGATGTCATCTCAGGGGTGCTCCGCCACCCCTCCTTCCGCAAGTGACTGAGACATTCCCTTaGTCCCCGCCTCACCGCTAT +
Preference number: 5 (lower is better)
Translates to: GRQRCHLRGAPPPLLPQVTETFP*SPPHRY
Trigger: ATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGT...CACTTGCGGAAGGAGGGGTGGCGGAGCACCCCTGAGATGACATCGCTGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS TCA 90 bp GGGATGGAGCTGGTTTCCGCAGGCAAGGCCTTATCCAACCAGACATaGAACCGCCATCCTGCCCCGCTGGGAGAAGCAGTGCAGTCCACT +
Preference number: 5 (lower is better)
Translates to: GMELVSAGKALSNQT*NRHPAPLGEAVQST
Trigger: AGTGGACTGCACTGCTTCTCCCAGCGGGGCAGGATGGCGGTTTCATGTCTGGTTGGATAAGGCCTTGCCTGCGGAAACCAGCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS TCA 90 bp ATCCAGAGCCTGAACCAGAGGCTTCCCCACAAACTCCTCCTGCACTaGGGTGTGGCAGGCGATCTCGTCCACAGAGTCGGGGTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: IQSLNQRLPHKLLLH*GVAGDLVHRVGVQL
Trigger: AAGCTGGACCCCGACTCTGTGGACGAGATCGCCTGCCACACCTCAGTGCAGGAGGAGTTTGTGGGGAAGCCTCTGGTTCAGGCTCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCAGTTCACACTCTCCTaGGGACCTGGGGTCATGCGT +
Preference number: 5 (lower is better)
Translates to: GWCGAEPTASADVGNSCNQFTLS*GPGVMR
Trigger: ACGCATGACCCCAGGTCCCAAGGAGAGTGTGAACTG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGCCTTGCCTTGCTGCCTaGGCTCTGGTGACCTCTGCA +
Preference number: 5 (lower is better)
Translates to: GCTCSHLGCKELSHRERRPCLAA*ALVTSA
Trigger: TGCAGAGGTCACCAGAGCCAAGGCAGCAAGGCAAGG...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp TCCTCATCCGTCACACGGATGTGTGGCAAAACCACCCAGCCTGGAGGTGCTGCTGGGAGGTGGGAGATCTaGTTGGCATCGAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SSSVTRMCGKTTQPGGAAGRWEI*LASSFR
Trigger: CCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCC...AGCAGCACCTCCAGGCTGGGTGGTTTTGCCACACATCCGTGTGACGGATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGACAGGAGCATGAAGGAGCTTaGGGGTCCCACAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: DSHCTHGVPQNQCTHPGQEHEGA*GSHSVG
Trigger: CCCAACACTGTGGGACCCCAAAGCTCCTTCATGCTC...CTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGTCCCCTCCCCCTGCCTaGTCTCGCAAGGCCGAGACC +
Preference number: 5 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMSPPPA*SRKAET
Trigger: GGTCTCGGCCTTGCGAGACAAGGCAGGGGGAGGGGA...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GACTCACACTGCACACACGGGGTACCTCAGAACCAGTGCACACACCCTGGACAGAGAGTTAGGGTTGGGTaGGGGTTCAGGCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: DSHCTHGVPQNQCTHPGQRVRVG*GFRLCL
Trigger: GAGGCAGAGCCTGAACCCCAACCCAACCCTAACTCT...CTGTCCAGGGTGTGTGCACTGGTTCTGAGGTACCCCGTGTGTGCAGTGTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGTTGCCCAGGGCGTCCTaGGGGATCCTCTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMLPRAS*GILWMR
Trigger: CCGCATCCAGAGGATCCCCAAGGACGCCCTGGGCAA...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGCTGGTGTGGGGCTGAGCCCACGGCCTCTGCAGATGTGGGAAACTCTTGCAATCCAGTACTCCGGGCCTaGGAAAAAGAGCTGTTTTAT +
Preference number: 5 (lower is better)
Translates to: GWCGAEPTASADVGNSCNPVLRA*EKELFY
Trigger: ATAAAACAGCTCTTTTTCCAAGGCCCGGAGTACTGG...ATTGCAAGAGTTTCCCACATCTGCAGAGGCCGTGGGCTCAGCCCCACACCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp TGGTGGAAGGAGGCGGAATGTCACGATGGACAGCCCGGGTTGAAGTTCCACTGGCTGGTCTCTGTTACTTaGCTCTGGAAACAGGGCTTA +
Preference number: 5 (lower is better)
Translates to: WWKEAECHDGQPGLKFHWLVSVT*LWKQGL
Trigger: TAAGCCCTGTTTCCAGAGCAAAGTAACAGAGACCAG...CCAGTGGAACTTCAACCCGGGCTGTCCATCGTGACATTCCGCCTCCTTCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCGCATTAGAGTTAGGGTaGGGTTGGGGTTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIALELG*GWGSGS
Trigger: AGAGCCTGAACCCCAACCCAACCCTAACTCTAATGC...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CACAGTGTTGGGGTCTCTATGGTCTTCCTTAGAGGGGAGGTGCTTTCACCTATGAGGTGGGAGATCTTGTaGGCATCGAGCTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: HSVGVSMVFLRGEVLSPMRWEIL*ASSFRS
Trigger: GCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCT...CATAGGTGAAAGCACCTCCCCTCTAAGGAAGACCATAGAGACCCCAACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGGGTAGGACAGTTTGTTaGAGCTACACATCCCACTTA +
Preference number: 5 (lower is better)
Translates to: GCTCSHLGCKELSHRERRGRTVC*SYTSHL
Trigger: TAAGTGGGATGTGTAGCTCAAACAAACTGTCCTACC...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGGTGCACATGCTCACATCTGGGCTGCAAAGAACTGAGTCACAGGGAGAGGCGGAGGTCTCTCTCCATATaGTTCACCCCATTACTGAAC +
Preference number: 5 (lower is better)
Translates to: GCTCSHLGCKELSHRERRRSLSI*FTPLLN
Trigger: GTTCAGTAATGGGGTGAACAATATGGAGAGAGACCT...CCGCCTCTCCCTGTGACTCAGTTCTTTGCAGCCCAGATGTGAGCATGTGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CCATGTCCACACTGTGAACTGAGACATTCCCTTTGTCCCCGCCTCACCGCTATCAAGAGAGAGTTCCTGTaGCTGGAGAAAACGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PCPHCELRHSLCPRLTAIKREFL*LEKTKH
Trigger: ATGCTTCGTTTTCTCCAGCAACAGGAACTCTCTCTT...GATAGCGGTGAGGCGGGGACAAAGGGAATGTCTCAGTTCACAGTGTGGACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACAGGTGACCTCTGCATTTaGCAGACACCCGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTGDLCI*QTPGRS
Trigger: GCTCCTCCCGGGTGTCTGCAAAATGCAGAGGTCACC...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp GGCTTACGTTCCAATGTACTTCGAACACTGGAACAAGGCTCATGTTTACCTACATGGGGTCCCACAGTGTaGGGGTCTCTATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GLRSNVLRTLEQGSCLPTWGPTV*GSLWSS
Trigger: GGAAGACCATAGAGACCCCAACACTGTGGGACCCCA...TGTAGGTAAACATGAGCCTTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp CTGCCTCAGGGAAGAGCAAAAGCAGCATCAGTCACCACCTACTACAAAAGTGACAAACGAAGCATCCCATaGATTGGCCTTGAAACATCA +
Preference number: 5 (lower is better)
Translates to: LPQGRAKAASVTTYYKSDKRSIP*IGLETS
Trigger: TGATGTTTCAAGGCCAATCAATGGGATGCTTCGTTT...GTCACTTTTGTAGTAGGTGGTGACTGATGCTGCTTTTGCTCTTCCCTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS-3UTR CAA 90 bp ACTTTGCTCTGGAAACAGGGCTTACGTTCCAATGTACTTCGAACACTGGAACAATTTTTAAGCATCTGTTaGGCGAAGCATCTCTACATA +
Preference number: 5 (lower is better)
Translates to: TLLWKQGLRSNVLRTLEQFLSIC*AKHLYI
Trigger: TATGTAGAGATGCTTCGCCAAACAGATGCTTAAAAA...TTGTTCCAGTGTTCGAAGTACATTGGAACGTAAGCCCTGTTTCCAGAGCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp GGGTCTGCCGGAACAGGCGCTAGGGCCCCGGGCCGATaGGGTCCTTGGAGGCGGGGGCGCTGGGCAGAGACT +
Preference number: 6 (lower is better)
Translates to: GSAGTGARAPGR*GPWRRGRWAET
Trigger: AGTCTCTGCCCAGCGCCCCCGCCTCCAAGGACCCCATCGGCCCGGGGCCCTAGCGCCTGTTCCGGCAGACCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp CCAGCAGCCGCAGGCCCCCGGCCAGGCCCGCGAAGGTaGCGGAGCCGATGGCCTCGATGGCGTTGTGAGACA +
Preference number: 6 (lower is better)
Translates to: PAAAGPRPGPRR*RSRWPRWRCET
Trigger: TGTCTCACAACGCCATCGAGGCCATCGGCTCCGCCACCTTCGCGGGCCTGGCCGGGGGCCTGCGGCTGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS TCA 72 bp AGCACGGTGTTGGCCGGGATGTCCTCGGGGACCTCCTaGAGGCCCCGCAAGCTGCAGAAGACAGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: STVLAGMSSGTS*RPRKLQKTATA
Trigger: GGCTGTGGCTGTCTTCTGCAGCTTGCGGGGCCTTCAGGAGGTCCCCGAGGACATCCCGGCCAACACCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp CCTGGGGACGGGGACACGCGAGCCTCTGCTAGGGCCTaGGGATGGAGCTGGTTTCCGCAGGCAAGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: PGDGDTRASARA*GWSWFPQARPY
Trigger: ATAAGGCCTTGCCTGCGGAAACCAGCTCCATCCCCAGGCCCTAGCAGAGGCTCGCGTGTCCCCGTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp GCCTCCTGCAGGGCGCACTCGCAGTGCAGGGGGTTGTaGGACAGGCGTATCTTGGCGCTGAGTTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: ASCRAHSQCRGL*DRRILALSLPR
Trigger: CCTGGGCAAACTCAGCGCCAAGATACGCCTGTCCCACAACCCCCTGCACTGCGAGTGCGCCCTGCAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp CCACGTCTGTGGTCCTGTGGGGGACGCTGCAGAGGCTaGCACCCGCATCCAGAGCCTGAACCAGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PRLWSCGGRCRG*HPHPEPEPEAS
Trigger: GGAAGCCTCTGGTTCAGGCTCTGGATGCGGGTGCCAGCCTCTGCAGCGTCCCCCACAGGACCACAGACGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CAA 90 bp CGGTGCAGGTGCTGGAAGGCCCCGTCCGGGAGGTGGGAGATCTTGTaGGCATCGAGCTTCAGGAGCACGGTGTTGGCCGGGATGTCCTCG +
Preference number: 6 (lower is better)
Translates to: RCRCWKAPSGRWEIL*ASSFRSTVLAGMSS
Trigger: CGAGGACATCCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCCGGACGGGGCCTTCCAGCACCTGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CAA 90 bp AGCCGGTGCAGGTGCTGGAAGGCCCCGTCCGGGAGGTGGGAGATCTaGTTGGCATCGAGCTTCAGGAGCACGGTGTTGGCCGGGATGTCC +
Preference number: 6 (lower is better)
Translates to: SRCRCWKAPSGRWEI*LASSFRSTVLAGMS
Trigger: GGACATCCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCCGGACGGGGCCTTCCAGCACCTGCACCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp GACGGGGACACGCGAGCCTCTGCTAGGGCCTGGGGATaGAGCTGGTTTCCGCAGGCAAGGCCTTATCCAACC +
Preference number: 6 (lower is better)
Translates to: DGDTRASARAWG*SWFPQARPYPT
Trigger: GGTTGGATAAGGCCTTGCCTGCGGAAACCAGCTCCATCCCCAGGCCCTAGCAGAGGCTCGCGTGTCCCCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp GCTGGAAGGCCCCGTCCGGGAGGTGGGAGATCTTGTTaGCATCGAGCTTCAGGAGCACGGTGTTGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: AGRPRPGGGRSC*HRASGARCWPG
Trigger: TCCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCCGGACGGGGCCTTCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CAA 72 bp TGCTGGAAGGCCCCGTCCGGGAGGTGGGAGATCTTGTaGGCATCGAGCTTCAGGAGCACGGTGTTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: CWKAPSGRWEIL*ASSFRSTVLAG
Trigger: CCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCCGGACGGGGCCTTCCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CAA 72 bp AGGTGCTGGAAGGCCCCGTCCGGGAGGTGGGAGATCTaGTTGGCATCGAGCTTCAGGAGCACGGTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: RCWKAPSGRWEI*LASSFRSTVLA
Trigger: GGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCTCCCACCTCCCGGACGGGGCCTTCCAGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CAA 72 bp AGGGGGTTGTGGGACAGGCGTATCTTGGCGCTGAGTTaGCCCAGGGCGTCCTTGGGGATCCTCTGGATGCGG +
Preference number: 6 (lower is better)
Translates to: RGLWDRRILALS*PRASLGILWMR
Trigger: CCGCATCCAGAGGATCCCCAAGGACGCCCTGGGCAAACTCAGCGCCAAGATACGCCTGTCCCACAACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp AGATCTTGTTGGCATCGAGCTTCAGGAGCACGGTGTTaGCCGGGATGTCCTCGGGGACCTCCTGAAGGCCCC +
Preference number: 6 (lower is better)
Translates to: RSCWHRASGARC*PGCPRGPPEGP
Trigger: GGGGCCTTCAGGAGGTCCCCGAGGACATCCCGGCCAACACCGTGCTCCTGAAGCTCGATGCCAACAAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp AGAGGCTTCCCCACAAACTCCTCCTGCACTGAGGTGTaGCAGGCGATCTCGTCCACAGAGTCGGGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RGFPTNSSCTEV*QAISSTESGSS
Trigger: GCTGGACCCCGACTCTGTGGACGAGATCGCCTGCCACACCTCAGTGCAGGAGGAGTTTGTGGGGAAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS CCA 72 bp GACACGCGAGCCTCTGCTAGGGCCTGGGGATGGAGCTaGTTTCCGCAGGCAAGGCCTTATCCAACCAGACAT +
Preference number: 6 (lower is better)
Translates to: DTRASARAWGWS*FPQARPYPTRH
Trigger: ATGTCTGGTTGGATAAGGCCTTGCCTGCGGAAACCAGCTCCATCCCCAGGCCCTAGCAGAGGCTCGCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS TCA 72 bp CTGGTTTCCGCAGGCAAGGCCTTATCCAACCAGACATaGAACCGCCATCCTGCCCCGCTGGGAGAAGCAGTG +
Preference number: 6 (lower is better)
Translates to: LVSAGKALSNQT*NRHPAPLGEAV
Trigger: CACTGCTTCTCCCAGCGGGGCAGGATGGCGGTTTCATGTCTGGTTGGATAAGGCCTTGCCTGCGGAAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291592.6
CDS GCA 72 bp CAAGGCCTTATCCAACCAGACATGAAACCGCCATCCTaGCCCGCTGGGAGAAGCAGTGCAGTCCACTCTGGC +
Preference number: 6 (lower is better)
Translates to: QGLIQPDMKPPS*PAGRSSAVHSG
Trigger: GCCAGAGTGGACTGCACTGCTTCTCCCAGCGGGGCAGGATGGCGGTTTCATGTCTGGTTGGATAAGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291592.6