RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC28 (Homo sapiens)

Ensembl gene IDs: ENSG00000168904

Ensembl transcript IDs: ENST00000301981.8, ENST00000331450.9, ENST00000447360.6, ENST00000558248.5, ENST00000558471.5, ENST00000558500.5, ENST00000558861.1, ENST00000558879.5, ENST00000558890.5, ENST00000558911.1, ENST00000559399.5, ENST00000559433.5, ENST00000559819.5, ENST00000560213.1, ENST00000560236.1, ENST00000560483.1, ENST00000561253.5, ENST00000561276.5, ENST00000561431.1

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAG +
Preference number: 1 (lower is better)
Translates to: SAVPPHWTGQDGRVC*TGWIPQCQAGSAPE
Trigger: CTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR GCA 90 bp AGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCT +
Preference number: 1 (lower is better)
Translates to: SSAVPPHWTGQDGRV*WTGWIPQCQAGSAP
Trigger: AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR GCA 90 bp CCTCCATGGGAGCCTCACTTTGCTGCCAACTCAGGCGCCCCACCCTaGTACTCAAGACCATTGAGGCCACGGGGTTTGCTGAAACTCCTC +
Preference number: 1 (lower is better)
Translates to: PPWEPHFAANSGAPP*YSRPLRPRGLLKLL
Trigger: GAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp CCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAG +
Preference number: 1 (lower is better)
Translates to: PPHWTGQDGRVCWTG*IPQCQAGSAPEVLE
Trigger: CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
3UTR CCA 90 bp GCAAGACGGTTTCCAGCCATGGAGAGCTCATTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACATACCATAGACGATTTCGGTCCACA +
Preference number: 1 (lower is better)
Translates to: ARRFPAMESSLRLGS*QRWRGTYHRRFRST
Trigger: TGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 90 bp CAAGTGGCAAAAATGCAAGACGGTTTCCAGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGAGATGGCGCGGCACATACCATAGAC +
Preference number: 1 (lower is better)
Translates to: QVAKMQDGFQPWRAH*GWAAGRDGAAHTID
Trigger: GTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR CCA 90 bp ATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGG +
Preference number: 1 (lower is better)
Translates to: ISREFCSAPALDRTG*KSVLDWLDSPVSSW
Trigger: CCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR GCA 90 bp CACTGTAGAACGTATAAACAAGGCTGGAACTTTCCAGAGGGTGTGTaGTCTGGGACCCTCACTGAGCCTCCATGGGAGCCTCACTTTGCT +
Preference number: 1 (lower is better)
Translates to: HCRTYKQGWNFPEGV*SGTLTEPPWEPHFA
Trigger: AGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTaGACAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCC +
Preference number: 1 (lower is better)
Translates to: SSIMTFLESSAVPPH*TGQDGRVCWTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR GCA 90 bp GAAGTAAGAACAGTGCAGATACAGTGGGAACACACGGTAACTTTCTaGCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: EVRTVQIQWEHTVTF*LLHSTWTVCFPGSR
Trigger: CCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
3UTR TCA 90 bp TCAAGACCATTGAGGCCACGGGGTTTGCTGAAACTCCTCAAAAACTaGCAAGTTTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGG +
Preference number: 1 (lower is better)
Translates to: SRPLRPRGLLKLLKN*QVSTGDTVENMVSG
Trigger: CCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR GCA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: GILALKLNHDISREF*SAPALDRTGWKSVL
Trigger: CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR GCA 90 bp AATAATCTCCGAATGCTACACCTTCTGCCCATCCACCACACTCGCTaGCAGTACCTTCTGTCTCCAAAGTACAAGGGGACCACACATACA +
Preference number: 1 (lower is better)
Translates to: NNLRMLHLLPIHHTR*QYLLSPKYKGTTHT
Trigger: TGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp ATACAGTGGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTaGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTGACTGTAAAAAG +
Preference number: 1 (lower is better)
Translates to: IQWEHTVTFCLLHST*TVCFPGSRCCDCKK
Trigger: CTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR GCA 90 bp GAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGTaGTTTCCGGGCAGCAGGTGTTGTGACTGTAAAAAGATCACACAT +
Preference number: 1 (lower is better)
Translates to: EHTVTFCLLHSTWTV*FPGSRCCDCKKITH
Trigger: ATGTGTGATCTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp GCCACGGGGTTTGCTGAAACTCCTCAAAAACTGACAAGTTTCCACTaGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGG +
Preference number: 1 (lower is better)
Translates to: ATGFAETPQKLTSFH*RHCGEHGLREITLW
Trigger: CCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR TCA 90 bp AGACGATTTCGGTCCACAGTGAGGTACTGCAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCT +
Preference number: 1 (lower is better)
Translates to: RRFRSTVRYCRERHM*SLSGKVSKRLVEMS
Trigger: AGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCTGGAGGTAGGAATTGCAGT +
Preference number: 1 (lower is better)
Translates to: LSGKVSKRLVEMSSV*SSFKSPTSGGRNCS
Trigger: ACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR GCA 90 bp CCAGGGAAACCACTTAAGTTCCACTTCTCATCAATTAAGTTCAGGTaGTGTACCCAAGGATTAAGGTTGAGACTGCCCAAAGGTTGTCTG +
Preference number: 1 (lower is better)
Translates to: PGKPLKFHFSSIKFR*CTQGLRLRLPKGCL
Trigger: CAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp AGATATGAAAAGGGACAAGAGGAAGTAAGAACAGTGCAGATACAGTaGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACG +
Preference number: 1 (lower is better)
Translates to: RYEKGQEEVRTVQIQ*EHTVTFCLLHSTWT
Trigger: CGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
3UTR GCA 90 bp TTTCTGGCAGGGTGGAGGCTCACAGACTTTCTGTTTATGGACTTTTaGAGAAGTCGAAGGCTGAATTTGGACCTGCTTTTCCTGTATTTT +
Preference number: 1 (lower is better)
Translates to: FLAGWRLTDFLFMDF*RSRRLNLDLLFLYF
Trigger: AAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp AGCACCACAGCCACTGCACCCGATGACTTTATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAATGTTGTTATCCACGTATACATACTG +
Preference number: 1 (lower is better)
Translates to: STTATAPDDFIVQIR*QAFQVNVVIHVYIL
Trigger: CAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 90 bp AAAATGCCATCCTTTGAAAGGAAGAGCAAATACGTGACTTCTTCATaGAGAGTTCTTTCTGGCAGGGTGGAGGCTCACAGACTTTCTGTT +
Preference number: 1 (lower is better)
Translates to: KMPSFERKSKYVTSS*RVLSGRVEAHRLSV
Trigger: AACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 90 bp TCTGGGCAAACAATTTCTAAGGCATTGTCACTAAGATCCAGACATTaGAGTTTTACAAGAGACCCAATGGCTTCCGGAACCACAACTATG +
Preference number: 1 (lower is better)
Translates to: SGQTISKALSLRSRH*SFTRDPMASGTTTM
Trigger: CATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
3UTR TCA 90 bp AACAGAAGTGAGAGGTACATTACACTAGTCGGACAAGCTGGAATGTaGAAGGTCTTAGTGAGGCACGGTGACCAAAAGATGTTTAATGTA +
Preference number: 1 (lower is better)
Translates to: NRSERYITLVGQAGM*KVLVRHGDQKMFNV
Trigger: TACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR TCA 90 bp GAGAATCCTGAATACCAAGTTAGCACATTTCATAGCTCCATTCCATaGCATATGATTGTAGAGGATGAAATAGAAAAATGTAGCAAGACA +
Preference number: 1 (lower is better)
Translates to: ENPEYQVSTFHSSIP*HMIVEDEIEKCSKT
Trigger: TGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CCA 90 bp CTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTTTGCTGAAGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: LRRPTLLLKTIEATGFAEVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...TTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CCA 90 bp GGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: GWKSVLDWLDSPVSSWQRVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...GCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
3UTR-3UTR CCA 90 bp TCCGTCCCTATGGCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATCCTCGGAAACTTGAATaGGAGCACCACAGCCACTGC +
Preference number: 2 (lower is better)
Translates to: SVPMAFTSAGRKTVRCPDPRKLE*EHHSHC
Trigger: GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGG...ATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR TCA 90 bp CAGCCCTCTCATAGCCAATTCCTGCAGAGGGAGGACGTGATCATGCTCCGTCCCGATTTCGGTCCACAGTaGGGTACTGCAGAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: QPSHSQFLQREDVIMLRPDFGPQ*GTAEKG
Trigger: GCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATC...GGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR CCA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 2 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
3UTR-3UTR CCA 90 bp GCTGCCAACTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTGGATATATTCCAACTTaGGGGAAGGGTGAAGGCATT +
Preference number: 2 (lower is better)
Translates to: AANSGAPPCYSRPLRPRGGYIPT*GKGEGI
Trigger: AATGCCTTCACCCTTCCCCCAAGTTGGAATATATCC...ACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CCA 90 bp GCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCCATGCTCCGTCCCTATaGCCTTCACCTCAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: AFTSAGRKTVRCPDEKESHAPSL*PSPQLG
Trigger: TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATG...GCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR GCA 90 bp GCTGCCAACTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTCAAGGACCGGAAACTTaGTTTAAATTAGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: AANSGAPPCYSRPLRPRGQGPET*FKLDLG
Trigger: CCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTG...ACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CAA 90 bp CTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTaGAGTGTTTATCAACTCAGCAGGTCAAAAGTCTGCAGACACTGG +
Preference number: 2 (lower is better)
Translates to: LAGFPSVKLAALLRF*SVYQLSRSKVCRHW
Trigger: CCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558879.5
3UTR-3UTR CCA 90 bp GCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATTCTGCAGACACTGGGTaGAGCAGCAGTAAGCCACAA +
Preference number: 2 (lower is better)
Translates to: AGFPSVKLAALLRFLSVYSADTG*SSSKPQ
Trigger: TTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGA...ATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558879.5
3UTR CAA 90 bp AAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATaGGACAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCC +
Preference number: 2 (lower is better)
Translates to: KLNHDISREFCSAPA*DRTGWKSVLDWLDS
Trigger: GGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR-3UTR TCA 90 bp CCTATGGCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: PMAFTSAGRKTVRCPDEKRERHM*SLSGKV
Trigger: AACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT...CTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR TCA 90 bp TCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCATGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SRDRPKSSGKNARRFPAMPWRAH*GWAAGR
Trigger: TCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGG...CATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR TCA 90 bp AAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCTTCACCTCGGAAACTTaGATGGGAGCACCACAGCCA +
Preference number: 2 (lower is better)
Translates to: KRKAASPRKLEWEHHSHCFTSET*MGAPQP
Trigger: TGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAA...GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR GCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCC +
Preference number: 2 (lower is better)
Translates to: SSIMTFLESSAVPPHWTGQDGRV*WTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG...TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR-3UTR CCA 90 bp GAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGCTGGGAGGAAAACTTACAAGAGACCCAATaGCTTCCGGAACCACAACTA +
Preference number: 2 (lower is better)
Translates to: EDVIMLRPYGLHLSWEENLQETQ*LPEPQL
Trigger: TAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAA...GTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR-3UTR GCA 90 bp GCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA +
Preference number: 2 (lower is better)
Translates to: AFTSAGRKTVRCPDEKESEMSSV*SSFKSP
Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...GCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR-3UTR GCA 90 bp ATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATCAACTAGCAGGTCAAAAGTCTaGAGACACTGGGTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: IPQCQAGSAPEVLECLSTSRSKV*RHWVEQ
Trigger: CTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCT...AGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558879.5
3UTR-3UTR CCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCAGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 2 (lower is better)
Translates to: LALKLNHDISREFCSAPADGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR-3UTR CCA 90 bp TTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGATTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: FHWRHCGEHGLREITLWGLDRTG*KSVLDW
Trigger: CCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAA...TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CCA 90 bp TCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCATGGGCAGCTGGCAGAGATaGCGCGGCACATACCATAGA +
Preference number: 2 (lower is better)
Translates to: SRDRPKSSGKNARRFPAMGSWQR*RGTYHR
Trigger: TCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCC...CATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR TCA 90 bp CACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAAAGCAAGGGAGGGGGAATCTGGCTAGATaGTCAAGTCACTGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: HCGEHGLREITLWGKQGRGNLAR*SSHCSP
Trigger: TGGAGAACAGTGACTTGATCATCTAGCCAGATTCCC...CCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CCA 90 bp GGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTGAATAAAAAGGAAAAACACAGATTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: GRCAFRAAGVVNKKEKHRLDRTG*KSVLDW
Trigger: CCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAA...TCTGTGTTTTTCCTTTTTATTCACAACACCTGCTGCCCGGAAAGCACACCGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560236.1
3UTR-3UTR CCA 90 bp TTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTTGAACACAGAAGACAAATaGGTCCTTAATTTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: FLPSPFYVDGVLSGQQVLNTEDK*VLNLGE
Trigger: CTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTT...CAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
3UTR-3UTR TCA 90 bp GTAGGTATGATACAGCCCTCTCATAGCCAATTCCTGCAGAGGGAGGACGTGATCGGCAAGCCTTTCAGGTaGATGTTGTTATCCACGTAT +
Preference number: 2 (lower is better)
Translates to: VGMIQPSHSQFLQREDVIGKPFR*MLLSTY
Trigger: ATACGTGGATAACAACATTCACCTGAAAGGCTTGCC...GATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR TCA 90 bp AAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCAGCCACTGCACCCGATaGCTTTATTGTACAGATAAG +
Preference number: 2 (lower is better)
Translates to: KRKAASPRKLEWEHHSHCSHCTR*LYCTDK
Trigger: CTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCT...GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR CCA 90 bp ATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 2 (lower is better)
Translates to: ILALKLNHDISREFCSAPDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...GGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR-3UTR CCA 90 bp ACTTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTAATGGGTCCTTAATTTaGGGGAGGATATATTCCAAC +
Preference number: 2 (lower is better)
Translates to: TFCLLHSTWTVCFPGSRCNGSLI*GRIYSN
Trigger: GTTGGAATATATCCTCCCCCAAATTAAGGACCCATT...ACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
3UTR-3UTR CCA 90 bp CGTATACATACTGTAGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAATTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA +
Preference number: 2 (lower is better)
Translates to: RIHTVVLEIDLNQVAKMQLRLGS*QRWRGT
Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...TTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR CAA 90 bp GGCTGTGAAGCAAGCTCTTTTCCTGACCGAGAGAATGTCAGTCACTaGGCTATGATCAATTCCTTTCCTAGAGACACCGGCATCACTTTC +
Preference number: 2 (lower is better)
Translates to: GCEASSFPDRENVSH*AMINSFPRDTGITF
Trigger: GAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CAA 90 bp CCAGAGGGCAGTGCAGCAGCTCTAGGAGACTTCTGGGTAATGAGATaGGAGACAGAAAGTTCAAATCTTTCAGCAAGCTGTGGTAGGTAT +
Preference number: 2 (lower is better)
Translates to: PEGSAAALGDFWVMR*ETESSNLSASCGRY
Trigger: ATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR-3UTR TCA 90 bp TGTGGTGCACCAGGTGACGAAGTAAATGTGCACGGGCTGTACTTTGAATCATCCAGTAGTGGAAGTAGCTaGAGCCTTTCACATGTGACA +
Preference number: 2 (lower is better)
Translates to: CGAPGDEVNVHGLYFESSSSGSS*SLSHVT
Trigger: TGTCACATGTGAAAGGCTTCAGCTACTTCCACTACT...GGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR TCA 90 bp AATGGGAGCACCACAGCCACTGCACCCGATGACTTTATTGTACAGATAAGATGGAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: NGSTTATAPDDFIVQIRWRERHM*SLSGKV
Trigger: AACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT...CCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR TCA 90 bp GTAGGTATGATACAGCCCTCTCATAGCCAATTCCTGCAGAGGGAGGACGTGATCTTAGCTAATCGAAGATaGCGTAAAGCTCTCAGACGA +
Preference number: 2 (lower is better)
Translates to: VGMIQPSHSQFLQREDVILANRR*RKALRR
Trigger: TCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAA...GATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR-3UTR GCA 90 bp CAGCAAGCTGTGGTAGGTATGATACAGCCCTCTCATAGCCAATTCCTGCAGAGGATCAAGTGGCAAAAATaGAAGACGGTTTCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: QQAVVGMIQPSHSQFLQRIKWQK*KTVSSH
Trigger: ATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGAT...CCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR CCA 90 bp TGTGGTGCACCAGGTGACGAAGTAAATGTGCACGGGCTGTACTTTGAATCATCCACGTATAAACAAGGCTaGAACTTTCCAGAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: CGAPGDEVNVHGLYFESSTYKQG*NFPEGV
Trigger: CACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGT...GGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR TCA 90 bp AAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAAAGCCACTGCACCCGATaGCTTTATTGTACAGATAAG +
Preference number: 2 (lower is better)
Translates to: KRFAALMKRKAASPRKLESHCTR*LYCTDK
Trigger: CTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCT...TTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR CCA 90 bp AAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCCTAAGATCCAGACATTaGAGTTTTACAAGAGACCCA +
Preference number: 2 (lower is better)
Translates to: KRKAASPRKLEWEHHSHCLRSRH*SFTRDP
Trigger: TGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAG...GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR CAA 90 bp CTTTCTGGCAGGGTGGAGGCTCACAGACTTTCTGTTTATGGACTTTaGCAGAAGTCGAAGGCTGAATTTGGACCTGCTTTTCCTGTATTT +
Preference number: 2 (lower is better)
Translates to: LSGRVEAHRLSVYGL*QKSKAEFGPAFPVF
Trigger: AAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR GCA 90 bp AATGGGAGCACCACAGCCACTGCACCCGATGACTTTATTGTACAGATAAGATGGATCAAGTGGCAAAAATaGAAGACGGTTTCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: NGSTTATAPDDFIVQIRWIKWQK*KTVSSH
Trigger: ATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGAT...CCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR GCA 90 bp TTCCACTTCTCATCAATTAAGTTCAGGTGCTGTACCCAAGGATTAAGGTTGAGAATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGAC +
Preference number: 2 (lower is better)
Translates to: FHFSSIKFRCCTQGLRLRISREF*SAPALD
Trigger: GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT...TCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CCA 90 bp TTCCACTTCTCATCAATTAAGTTCAGGTGCTGTACCCAAGGATTAAGGTTGAGAATGAAGAGTTCTTTCTaGCAGGGTGGAGGCTCACAG +
Preference number: 2 (lower is better)
Translates to: FHFSSIKFRCCTQGLRLRMKSSF*QGGGSQ
Trigger: CTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCAT...TCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR TCA 90 bp AAACGATTGGTAGAAATGTCTAGTGTCTGCAGCTCCTTCAAATCGCCAACCTCTTTAGCTAATCGAAGATaGCGTAAAGCTCTCAGACGA +
Preference number: 2 (lower is better)
Translates to: KRLVEMSSVCSSFKSPTSLANRR*RKALRR
Trigger: TCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAA...AGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
3UTR-3UTR CCA 90 bp ATCGAAGATGACGTAAAGCTCTCAGACGACCAATTTCTGGGCAAACAATTTCTATTACAAGAGACCCAATaGCTTCCGGAACCACAACTA +
Preference number: 2 (lower is better)
Translates to: IEDDVKLSDDQFLGKQFLLQETQ*LPEPQL
Trigger: TAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAA...TAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
3UTR-3UTR CCA 90 bp TATACATACTGTAGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGAGGTAGGAATTGCAGTTaGTTATTAGCTAATCGAAGA +
Preference number: 2 (lower is better)
Translates to: YTYCSSRDRPKSSGKNARGRNCS*LLANRR
Trigger: TCTTCGATTAGCTAATAACCAACTGCAATTCCTACC...TCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559433.5
3UTR GCA 72 bp GTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: VPPHWTGQDGRV*WTGWIPQCQAG
Trigger: GCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
3UTR CCA 72 bp CCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: PPHWTGQDGRVC*TGWIPQCQAGS
Trigger: GCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
3UTR CCA 72 bp GAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTG +
Preference number: 3 (lower is better)
Translates to: EFCSAPALDRTG*KSVLDWLDSPV
Trigger: CACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR CCA 72 bp CCTGCAGAGGGAGGACGTGATCATGCTCCGTCCCTATaGCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCT +
Preference number: 3 (lower is better)
Translates to: PAEGGRDHAPSL*PSPQLGGKRFA
Trigger: AGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 72 bp GAACTTTCCAGAGGGTGTGTGCTCTGGGACCCTCACTaGGCCTCCATGGGAGCCTCACTTTGCTGCCAACTC +
Preference number: 3 (lower is better)
Translates to: ELSRGCVLWDPH*ASMGASLCCQL
Trigger: GAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR TCA 72 bp AAAATGCAAGACGGTTTCCAGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGAGATGGCGCGGCACAT +
Preference number: 3 (lower is better)
Translates to: KMQDGFQPWRAH*GWAAGRDGAAH
Trigger: ATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 72 bp AGCCCTCTCATAGCCAATTCCTGCAGAGGGAGGACGTaGTCATGCTCCGTCCCTATGGCCTTCACCTCAGCT +
Preference number: 3 (lower is better)
Translates to: SPLIANSCRGRT*SCSVPMAFTSA
Trigger: AGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR GCA 72 bp CGAATGCTACACCTTCTGCCCATCCACCACACTCGCTaGCAGTACCTTCTGTCTCCAAAGTACAAGGGGACC +
Preference number: 3 (lower is better)
Translates to: RMLHLLPIHHTR*QYLLSPKYKGT
Trigger: GGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 72 bp TTTCCAGCCATGGAGAGCTCATTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACATACCATAGACGATTT +
Preference number: 3 (lower is better)
Translates to: FPAMESSLRLGS*QRWRGTYHRRF
Trigger: AAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR-3UTR CAA 90 bp CCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCACTTCACCTCGGAAACTaGAATGGGAGCACCACAGCC +
Preference number: 3 (lower is better)
Translates to: PSPQLGGKRFAALMKRKALHLGN*NGSTTA
Trigger: GGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAG...TGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 72 bp GGCGCGGCACATACCATAGACGATTTCGGTCCACAGTaGGGTACTGCAGAGAAAGGCACATGTGAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: GAAHTIDDFGPQ*GTAEKGTCEAS
Trigger: AGAGGCTTCACATGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR GCA 72 bp ATGGCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTaGCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAA +
Preference number: 3 (lower is better)
Translates to: MAFTSAGRKTVR*PDEKESSFTSE
Trigger: TTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR CCA 72 bp GAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTaGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTGAC +
Preference number: 3 (lower is better)
Translates to: EHTVTFCLLHST*TVCFPGSRCCD
Trigger: GTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CAA 90 bp AAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCCTTCACCTCGGAAACTaGAATGGGAGCACCACAGCC +
Preference number: 3 (lower is better)
Translates to: KRKAASPRKLEWEHHSHCLHLGN*NGSTTA
Trigger: GGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAG...GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 72 bp CCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTaGATGGGAGCACCACAGCCACTGCACCCGATGACT +
Preference number: 3 (lower is better)
Translates to: PDEKESSFTSET*MGAPQPLHPMT
Trigger: AGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR CCA 72 bp GAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTaGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTGAA +
Preference number: 3 (lower is better)
Translates to: EHTVTFCLLHST*TVCFPGSRCCE
Trigger: TTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560236.1
3UTR GCA 72 bp GCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGACAGGACAGGATGGAAG +
Preference number: 3 (lower is better)
Translates to: ALKLNHDISREF*SAPALDRTGWK
Trigger: CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
3UTR GCA 72 bp ACAGTGCAGATACAGTGGGAACACACGGTAACTTTCTaGCTTCTCCATTCTACGTGGACGGTGTGCTTTCCG +
Preference number: 3 (lower is better)
Translates to: TVQIQWEHTVTF*LLHSTWTVCFP
Trigger: CGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
3UTR TCA 72 bp CGGTCCACAGTGAGGTACTGCAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTTAGCAAACGATTGGTA +
Preference number: 3 (lower is better)
Translates to: RSTVRYCRERHM*SLSGKVSKRLV
Trigger: TACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCTGCAGTACCTCACTGTGGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR GCA 72 bp GTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGTaGTTTCCGGGCAGCAGGTGTTGTGACTGTAAAAAG +
Preference number: 3 (lower is better)
Translates to: VTFCLLHSTWTV*FPGSRCCDCKK
Trigger: CTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR TCA 72 bp TTGAGGCCACGGGGTTTGCTGAAACTCCTCAAAAACTaGCAAGTTTCCACTGGAGACACTGTGGAGAACATG +
Preference number: 3 (lower is better)
Translates to: LRPRGLLKLLKN*QVSTGDTVENM
Trigger: CATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CAA 90 bp CCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAAAAGTTAGCAAACGATaGGTAGAAATGTCTAGTGTC +
Preference number: 3 (lower is better)
Translates to: PSPQLGGKRFAALMKRKAKVSKR*VEMSSV
Trigger: GACACTAGACATTTCTACCAATCGTTTGCTAACTTT...TGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 72 bp GAGAGGTACATTACACTAGTCGGACAAGCTGGAATGTaGAAGGTCTTAGTGAGGCACGGTGACCAAAAGATG +
Preference number: 3 (lower is better)
Translates to: ERYITLVGQAGM*KVLVRHGDQKM
Trigger: CATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR GCA 72 bp GGGTGGAGGCTCACAGACTTTCTGTTTATGGACTTTTaGAGAAGTCGAAGGCTGAATTTGGACCTGCTTTTC +
Preference number: 3 (lower is better)
Translates to: GWRLTDFLFMDF*RSRRLNLDLLF
Trigger: GAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR GCA 72 bp TTACATACAGAAATAATCTCCGAATGCTACACCTTCTaGCCATCCACCACACTCGCTGCCAGTACCTTCTGT +
Preference number: 3 (lower is better)
Translates to: LHTEIISECYTF*PSTTLAASTFC
Trigger: ACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 72 bp TCCTCAAAAACTGACAAGTTTCCACTGGAGACACTGTaGAGAACATGGTCTCAGGGAAATAACTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SSKTDKFPLETL*RTWSQGNNSLG
Trigger: CCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR TCA 72 bp TCCTTTGAAAGGAAGAGCAAATACGTGACTTCTTCATaGAGAGTTCTTTCTGGCAGGGTGGAGGCTCACAGA +
Preference number: 3 (lower is better)
Translates to: SFERKSKYVTSS*RVLSGRVEAHR
Trigger: TCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR TCA 72 bp AAACTTGAATGGGAGCACCACAGCCACTGCACCCGATaGCTTTATTGTACAGATAAGATGGCAAGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: KLEWEHHSHCTR*LYCTDKMASLS
Trigger: TGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR CCA 72 bp GAGCAAATACGTGACTTCTTCATGAAGAGTTCTTTCTaGCAGGGTGGAGGCTCACAGACTTTCTGTTTATGG +
Preference number: 3 (lower is better)
Translates to: EQIRDFFMKSSF*QGGGSQTFCLW
Trigger: CCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR-3UTR CAA 90 bp GGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTGAATAAAAAGGAAAAACACAGAAAATGGGTCCTTAATTaGGGGGAGGATATATTCCAA +
Preference number: 3 (lower is better)
Translates to: GRCAFRAAGVVNKKEKHRKWVLN*GEDIFQ
Trigger: TTGGAATATATCCTCCCCCAAATTAAGGACCCATTT...TCTGTGTTTTTCCTTTTTATTCACAACACCTGCTGCCCGGAAAGCACACCGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000560236.1
3UTR TCA 72 bp GGTAGGAATTGCAGTTGGTTATTAGCTAATCGAAGATaGCGTAAAGCTCTCAGACGACCAATTTCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: GRNCSWLLANRR*RKALRRPISGQ
Trigger: TTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
3UTR GCA 72 bp CCACTTAAGTTCCACTTCTCATCAATTAAGTTCAGGTaGTGTACCCAAGGATTAAGGTTGAGACTGCCCAAA +
Preference number: 3 (lower is better)
Translates to: PLKFHFSSIKFR*CTQGLRLRLPK
Trigger: TTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 72 bp ACAATTTCTAAGGCATTGTCACTAAGATCCAGACATTaGAGTTTTACAAGAGACCCAATGGCTTCCGGAACC +
Preference number: 3 (lower is better)
Translates to: TISKALSLRSRH*SFTRDPMASGT
Trigger: GGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
3UTR-3UTR CAA 90 bp AGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCAAAGTTAGCAAACGATaGGTAGAAATGTCTAGTGTC +
Preference number: 3 (lower is better)
Translates to: SSRDRPKSSGKNARRFPAKVSKR*VEMSSV
Trigger: GACACTAGACATTTCTACCAATCGTTTGCTAACTTT...GGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
3UTR TCA 72 bp TTAAAATGCCATCCTTTGAAAGGAAGAGCAAATACGTaGCTTCTTCATGAAGAGTTCTTTCTGGCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LKCHPLKGRANT*LLHEEFFLAGW
Trigger: CCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CCA 72 bp TACTTCATAGGAAGGCCTATGCTCATGAGGCTATCCTaGACTTTAAAACTTATCGCTAACCACACAAGAGTT +
Preference number: 3 (lower is better)
Translates to: YFIGRPMLMRLS*TLKLIANHTRV
Trigger: AACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTATGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp GCTCCGTCCCTATGGCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGGAGCGCAAGCGGCGCTaGAAGCCAAGCGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: APSLWPSPQLGGKRFAALERKRR*KPSGGR
Trigger: CCGTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTC...CAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGAGCGCAAGCGGCGCTaGAAGCCAAGCGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSERKRR*KPSGGR
Trigger: CCGTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTC...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR GCA 90 bp GCTGCCAACTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTTCAGGCGCCCCACCCTaGTACTCAAGACCATTGAGG +
Preference number: 4 (lower is better)
Translates to: AANSGAPPCYSRPLRPRGSGAPP*YSRPLR
Trigger: CCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGA...ACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp GAGGGAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGCTGGGAGGATTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: EGGRDHAPSLWPSPQLGGLRLGS*QRWRGT
Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...TCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp TTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGAGGACCCGGCAGCTGTaGCCACCCGAGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: FLESSAVPPHWTGQDGRVRTRQL*PPEART
Trigger: CGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGTCCT...CACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331450.9
3UTR CAA 72 bp CTGGGACCCTCACTGAGCCTCCATGGGAGCCTCACTTaGCTGCCAACTCAGGCGCCCCACCCTGCTACTCAA +
Preference number: 4 (lower is better)
Translates to: LGPSLSLHGSLT*LPTQAPHPATQ
Trigger: TTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp AGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGGGAGCCTCACTTTGCTaGCAACTCAGGCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RMEECAGLAGFPSVKLAAGASLC*QLRRPT
Trigger: GGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCC...CGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp GAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGGGCCTTCACCTCAGCTaGGAGGAAAACGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: ECAGLAGFPSVKLAALLRGLHLS*EENGSL
Trigger: CAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCC...CCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp CTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTGAGAGCCTCGCCACTTaGATCACCCGACGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LAGFPSVKLAALLRFLSVESLAT*ITRRGG
Trigger: TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTC...AACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR GCA 90 bp CTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTTTGCTGAAGTTGTCTTCCACTGGTaGAGCCCTGCCATTGGCGTC +
Preference number: 4 (lower is better)
Translates to: LRRPTLLLKTIEATGFAEVVFHW*SPAIGV
Trigger: GACGCCAATGGCAGGGCTGCACCAGTGGAAGACAAC...TTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp AGGCTGGGCAGCTGGCAGAGATGGCGCGGCACATACCATAGACGATTTCGGTCCCATGCTCCGTCCCTATaGCCTTCACCTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLGSWQRWRGTYHRRFRSHAPSL*PSPQLG
Trigger: TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATG...GGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp GAGGGAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGCTGGGAGGACATGCTCCGTCCCTATaGCCTTCACCTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EGGRDHAPSLWPSPQLGGHAPSL*PSPQLG
Trigger: TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATG...TCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp GAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ECAGLAGFPSVKLAALLRDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...CCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp GCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGCTCACTGAGCCTCCATaGGAGCCTCACTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGLAGFPSVKLAALLRFLLTEPP*EPHFAA
Trigger: GGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAG...CAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGCCGCGGGCCGCAGAGTaGGAGGAGGACCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQPRAAE*EEDPAA
Trigger: AGCTGCCGGGTCCTCCTCCCACTCTGCGGCCCGCGG...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR CCA 90 bp CGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCGCAAGCGGCGCTaGAAGCCAAGCGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: RFAALMKRKAASPRKLEWERKRR*KPSGGR
Trigger: CCGTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTC...CCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp CTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LAGFPSVKLAALLRFLSVPWRAH*GWAAGR
Trigger: TCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGG...AACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGCCACTGGTGCAGCCCTaGCATTGGCGTCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLEPLVQP*HWRLSQ
Trigger: TTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGG...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR GCA 90 bp ATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCGTTGTCTTCCACTGGTaGAGCCCTGCCATTGGCGTC +
Preference number: 4 (lower is better)
Translates to: MEECAGLAGFPSVKLAALVVFHW*SPAIGV
Trigger: GACGCCAATGGCAGGGCTGCACCAGTGGAAGACAAC...GAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp GGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTCCTCGGAAACTTGAATaGGAGCACCACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GRVCWTGWIPQCQAGSAPPRKLE*EHHSHC
Trigger: GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGG...AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp TGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTCATGCTCCGTCCCTATaGCCTTCACCTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CWTGWIPQCQAGSAPEVLHAPSL*PSPQLG
Trigger: TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATG...AAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp GAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGACAGTTGTCTTCCACTaGTGCAGCCCTGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: EECAGLAGFPSVKLAALLTVVFH*CSPAIG
Trigger: GCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGT...CAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp GGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRVCWTGWIPQCQAGSAPDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR TCA 90 bp ACTTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TFCLLHSTWTVCFPGSRCPWRAH*GWAAGR
Trigger: TCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGG...ACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp AAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCACCCGATCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KQLHLGNLNGSTTATAPDPWRAH*GWAAGR
Trigger: TCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGG...ATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGTTCACCTCGGAAACTTaGATGGGAGCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AGLAGFPSVKLAALLRFLFTSET*MGAPQP
Trigger: TGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAA...CAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp ACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTGCAGAGGGAGGACGTaGTCATGCTCCGTCCCTATG +
Preference number: 4 (lower is better)
Translates to: TGWIPQCQAGSAPEVLECCRGRT*SCSVPM
Trigger: CATAGGGACGGAGCATGATCACGTCCTCCCTCTGCA...ACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp GCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGGTCTGCCCAGCCCACTaGTGTTGTTTAACACACCGT +
Preference number: 4 (lower is better)
Translates to: AGLAGFPSVKLAALLRFLVCPAH*CCLTHR
Trigger: ACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGAC...CAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp CTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTTTGCTGAAGTGATCTCAGCTCAATaGAACCTCTTCCTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LRRPTLLLKTIEATGFAEVISAQ*NLFLPG
Trigger: ACCCGGCAGGAAGAGGTTGCATTGAGCTGAGATCAC...TTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCATCCACCACACTCGCTaGCAGTACCTTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GWKSVLDWLDSPVSSWQRIHHTR*QYLLSP
Trigger: TGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGAT...GCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp ACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTGGCAGCTGGCAGAGATaGCGCGGCACATACCATAGA +
Preference number: 4 (lower is better)
Translates to: TGWIPQCQAGSAPEVLECGSWQR*RGTYHR
Trigger: TCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCC...ACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp TTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: FLESSAVPPHWTGQDGRVLRLGS*QRWRGT
Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...CACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp GTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTTCTGCAGACACTGGGTaGAGCAGCAGTAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: VCWTGWIPQCQAGSAPEVSADTG*SSSKPQ
Trigger: TTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGA...AACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp GGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GQDGRVCWTGWIPQCQAGVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...GCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLEDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp CAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGTGCCCCCGCATTaGACAGGACAGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: QDRMEECAGLAGFPSVKLAVPPH*TGQDGR
Trigger: TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGC...CAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp ATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTTCTCCATTCTACGTaGACGGTGTGCTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: MEECAGLAGFPSVKLAALLLHST*TVCFPG
Trigger: GCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAG...GAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGCGACCCGGACGCTTTaGCAGGACCACGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQATRTL*QDHVWG
Trigger: GCCCCAGACGTGGTCCTGCCAAAGCGTCCGGGTCGC...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR GCA 90 bp AAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCACCCGATGCCCCAGAGGGCAGTaGAGCAGCTCTAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: KAASPRKLEWEHHSHCTRCPRGQ*SSSRRL
Trigger: AAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCA...TCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR GCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGAGCAGGTCAAAAGTCTaGAGACACTGGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLESRSKV*RHWVEQ
Trigger: CTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCT...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR GCA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTAGCAGGTCAAAAGTCTaGAGACACTGGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSSRSKV*RHWVEQ
Trigger: CTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCT...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR GCA 90 bp CAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGCAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: QDRMEECAGLAGFPSVKLQDGRV*WTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG...CAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR GCA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQQDGRV*WTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR GCA 90 bp ACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTCAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: TGWIPQCQAGSAPEVLECQDGRV*WTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG...ACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp AGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGCCTCGGAAACTTGAATaGGAGCACCACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: REFCSAPALDRTGWKSVLPRKLE*EHHSHC
Trigger: GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGG...CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp ATTCCTGCAGAGGGAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGCCTCGGAAACTTGAATaGGAGCACCACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: IPAEGGRDHAPSLWPSPQPRKLE*EHHSHC
Trigger: GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGG...CTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp CTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LAGFPSVKLAALLRFLSVVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...AACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTTTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSLDRTG*KSVLDW
Trigger: CCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAA...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp GAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGCCACTGGAGACACTGTaGAGAACATGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ESSAVPPHWTGQDGRVCWPLETL*RTWSQG
Trigger: TCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGG...CCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp CAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGATTTCGGTCCACAGTaGGGTACTGCAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: QDRMEECAGLAGFPSVKLDFGPQ*GTAEKG
Trigger: GCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATC...CAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp CGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGCCATGGAGAGCTCATTaGGGCTGGGCAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RFAALMKRKAASPRKLEWPWRAH*GWAAGR
Trigger: TCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGG...CCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGGGCAAGCCTTTCAGGTaGATGTTGTTATCCACGTAT +
Preference number: 4 (lower is better)
Translates to: ECAGLAGFPSVKLAALLRGKPFR*MLLSTY
Trigger: ATACGTGGATAACAACATTCACCTGAAAGGCTTGCC...CCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp ATTCCTGCAGAGGGAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGTTCACCTCGGAAACTTaGATGGGAGCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IPAEGGRDHAPSLWPSPQFTSET*MGAPQP
Trigger: TGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAA...CTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAACTTGGGGGAAGGGTaGAGGCATTTTAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: EECAGLAGFPSVKLAALLNLGEG*RHFSSE
Trigger: TTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTT...CAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR TCA 90 bp ATACAGTGGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGCTCTGGGACCCTCACTaGGCCTCCATGGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IQWEHTVTFCLLHSTWTVLWDPH*ASMGAS
Trigger: TGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAG...CACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTAGTGTGGTGCACCAGGTaGCGAAGTAAATGTGCACGG +
Preference number: 4 (lower is better)
Translates to: GWIPQCQAGSAPEVLECLVWCTR*RSKCAR
Trigger: CCGTGCACATTTACTTCGTCACCTGGTGCACCACAC...TAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp AGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGAAACGAGGGCCAACATaGAGACAGTGTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: REFCSAPALDRTGWKSVLKRGPT*RQCGAP
Trigger: TGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTT...CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTGCAGAAGTCGAAGGCTaGATTTGGACCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DGRVCWTGWIPQCQAGSAAEVEG*IWTCFS
Trigger: GGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGC...AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GCAGAGGGAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGCTGGGAAGGAAAACGGTTCGCTaGCCTGATGAAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: AEGGRDHAPSLWPSPQLGRKTVR*PDEKES
Trigger: GCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCT...TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR GCA 90 bp AGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGAGCAGGTCAAAAGTCTaGAGACACTGGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: REFCSAPALDRTGWKSVLSRSKV*RHWVEQ
Trigger: CTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCT...CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR GCA 90 bp GATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: DGRVCWTGWIPQCQAGSAISREF*SAPALD
Trigger: GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT...AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR GCA 90 bp AGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: RMEECAGLAGFPSVKLAAISREF*SAPALD
Trigger: GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT...CGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR GCA 90 bp GGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: GQDGRVCWTGWIPQCQAGISREF*SAPALD
Trigger: GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT...GCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR GCA 90 bp GACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGTCTACGTGGACGGTGTaGTTTCCGGGCAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: DISREFCSAPALDRTGWKSTWTV*FPGSRC
Trigger: ACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGA...CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp ATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATTTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: IMTFLESSAVPPHWTGQDLRLGS*QRWRGT
Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...ATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp AGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTTGAGGCTGGGCAGCTaGCAGAGATGGCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: RKTVRCPDEKESSFTSETLRLGS*QRWRGT
Trigger: TGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAA...AGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp CTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTCTGCAGACACTGGGTaGAGCAGCAGTAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LAGFPSVKLAALLRFLSVSADTG*SSSKPQ
Trigger: TTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGA...AACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CCA 90 bp GATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTAGGGAAATAACTCTCTaGGGAAAGCAAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: DGRVCWTGWIPQCQAGSAREITL*GKQGRG
Trigger: TCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCT...AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTTGCTTCTCCATTCTACGTaGACGGTGTGCTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: FLPSPFYVDGVLSGQQVLLLHST*TVCFPG
Trigger: GCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAG...CAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCAAGCCTCCCGAGTAGCTaGGACTGCAGGTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: LALKLNHDISREFCSAPASLPSS*DCRCAP
Trigger: TGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCT...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp ATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: MEECAGLAGFPSVKLAALRERHM*SLSGKV
Trigger: AACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT...GAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp TCATTGAGGCTGGGCAGCTGGCAGAGATGGCGCGGCACATACCATAGACGATTTGATTTCGGTCCACAGTaGGGTACTGCAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLRLGSWQRWRGTYHRRFDFGPQ*GTAEKG
Trigger: GCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATC...AAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATCAATGCAGAGGGAGGACGTaGTCATGCTCCGTCCCTATG +
Preference number: 4 (lower is better)
Translates to: GFPSVKLAALLRFLSVYQCRGRT*SCSVPM
Trigger: CATAGGGACGGAGCATGATCACGTCCTCCCTCTGCA...TTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447360.6
CDS-3UTR TCA 90 bp CTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTTTGCTGAAAGTAGTGGAAGTAGCTaGAGCCTTTCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: LRRPTLLLKTIEATGFAESSGSS*SLSHVT
Trigger: TGTCACATGTGAAAGGCTTCAGCTACTTCCACTACT...TTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp ATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCAGCAAGCTCTTTTCCTaGCCGAGAGAATGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: MEECAGLAGFPSVKLAALSKLFS*PRECQS
Trigger: TGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCT...GAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGATCAAGTGGCAAAAATaGAAGACGGTTTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ECAGLAGFPSVKLAALLRIKWQK*KTVSSH
Trigger: ATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGAT...CCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp ATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTCCACTGGTGCAGCCCTaGCATTGGCGTCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ISREFCSAPALDRTGWKSPLVQP*HWRLSQ
Trigger: TTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGG...ACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR GCA 90 bp TTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAATGGGAGCCTCACTTTaGTGCCAACTCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FHWRHCGEHGLREITLWGMGASL*CQLRRP
Trigger: GGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCAT...TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGCACACGGTAACTTTCTaGCTTCTCCATTCTACGTGG +
Preference number: 4 (lower is better)
Translates to: ESSAVPPHWTGQDGRVCWHTVTF*LLHSTW
Trigger: CCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTG...CCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp GATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCTGAGCAAGGTTTTCTaGCAAGGATGTCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: DGRVCWTGWIPQCQAGSALSKVF*QGCQGV
Trigger: AACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAG...AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR CCA 90 bp ATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGGCAGCTGGCAGAGATaGCGCGGCACATACCATAGA +
Preference number: 4 (lower is better)
Translates to: ISREFCSAPALDRTGWKSGSWQR*RGTYHR
Trigger: TCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCC...ACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp ACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGGCCTTCACCTCAGCTaGGAGGAAAACGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: TFLESSAVPPHWTGQDGRGLHLS*EENGSL
Trigger: CAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCC...TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp GCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGGGATATATTCCAACTTaGGGGAAGGGTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: AGLAGFPSVKLAALLRFLGYIPT*GKGEGI
Trigger: AATGCCTTCACCCTTCCCCCAAGTTGGAATATATCC...CAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR TCA 90 bp GACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGGATTTCGGTCCACAGTaGGGTACTGCAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DISREFCSAPALDRTGWKDFGPQ*GTAEKG
Trigger: GCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATC...CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGGGGAATCTGGCTAGATaGTCAAGTCACTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQGNLAR*SSHCSP
Trigger: TGGAGAACAGTGACTTGATCATCTAGCCAGATTCCC...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp AGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGAAACTCCTCAAAAACTaGCAAGTTTCCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RVCWTGWIPQCQAGSAPEKLLKN*QVSTGD
Trigger: GTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTT...CTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp CAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGTTCACAGCAAGCAGATaGACATCTGGCAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QDRMEECAGLAGFPSVKLFTASR*TSGSKA
Trigger: TGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAA...CAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGGGGCAGCAGGTGTTGTaGATAAAAAGGAAAAACACA +
Preference number: 4 (lower is better)
Translates to: EECAGLAGFPSVKLAALLGQQVL*IKRKNT
Trigger: TGTGTTTTTCCTTTTTATTCACAACACCTGCTGCCC...CAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000560236.1
CDS-3UTR GCA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGTCCCATCAGGCACGCTaGAGCACTATATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQSHQAR*STISCQ
Trigger: TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGA...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
CDS-3UTR GCA 90 bp GAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA +
Preference number: 4 (lower is better)
Translates to: ESSAVPPHWTGQDGRVCWEMSSV*SSFKSP
Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...CCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACATGCCCCAGAGGGCAGTaGAGCAGCTCTAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: LNHDISREFCSAPALDRTCPRGQ*SSSRRL
Trigger: AAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCA...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCTGAGCAAGGTTTTCTaGCAAGGATGTCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQLSKVF*QGCQGV
Trigger: AACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAG...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR CCA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACACATGCTCCGTCCCTATaGCCTTCACCTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LNHDISREFCSAPALDRTHAPSL*PSPQLG
Trigger: TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATG...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp ACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGCAGCCCTGCCATTaGCGTCTCTCTCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TFLESSAVPPHWTGQDGRVQPCH*RLSQGK
Trigger: TTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCAC...TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp TTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAGCAGTGCCCCCGCATTaGACAGGACAGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: FHWRHCGEHGLREITLWGAVPPH*TGQDGR
Trigger: TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGC...TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACGCAGTGCCCCCGCATTaGACAGGACAGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKLNHDISREFCSAPALDAVPPH*TGQDGR
Trigger: TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGC...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp GGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCGGATATATTCCAACTTaGGGGAAGGGTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: GQDGRVCWTGWIPQCQAGGYIPT*GKGEGI
Trigger: AATGCCTTCACCCTTCCCCCAAGTTGGAATATATCC...GCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp GGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTAACACAGAAGACAAATaGGTCCTTAATTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRVCWTGWIPQCQAGSAPNTEDK*VLNLGE
Trigger: CTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTT...AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp GAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGACAGTGCAGATACAGTaGGAACACACGGTAACTTTC +
Preference number: 4 (lower is better)
Translates to: ESSAVPPHWTGQDGRVCWTVQIQ*EHTVTF
Trigger: GAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGT...CCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR TCA 90 bp GGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTAAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: GWIPQCQAGSAPEVLECLRERHM*SLSGKV
Trigger: AACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT...TAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp AAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCACCCGAAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: KAASPRKLEWEHHSHCTRRERHM*SLSGKV
Trigger: AACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT...TCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATCAATTCACCTCGGAAACTTaGATGGGAGCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GFPSVKLAALLRFLSVYQFTSET*MGAPQP
Trigger: TGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAA...TTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447360.6
CDS-3UTR TCA 90 bp ATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGGCTCACTACACCGATaGCAGTGCCCCAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILALKLNHDISREFCSAPGSLHR*QCPRGQ
Trigger: CTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCC...GGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGGAGAGGAAGCATCACTaGAGGTATGTGTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLEERKHH*RYVCSK
Trigger: TTTTGAACACACATACCTTCAGTGATGCTTCCTCTC...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCGGAAGAGCAAATACGTaGCTTCTTCATGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GQDGRVCWTGWIPQCQAGGRANT*LLHEEF
Trigger: GAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCC...GCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp CCATGGGAGCCTCACTTTGCTGCCAACTCAGGCGCCCCACCCTGCTACTCAAGACATAGCTCCATTCCATaGCATATGATTGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PWEPHFAANSGAPPCYSRHSSIP*HMIVED
Trigger: ATCCTCTACAATCATATGTCATGGAATGGAGCTATG...TCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGAGGCAAGATATTCACTaGGTTTCTGGGAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLERQDIH*VSGKCR
Trigger: CCTACATTTCCCAGAAACTCAGTGAATATCTTGCCT...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp AGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGATAAACTGCAGTAACTaGGAGAGGCAACCAAATTGG +
Preference number: 4 (lower is better)
Translates to: RMEECAGLAGFPSVKLAAINCSN*ERQPNW
Trigger: CCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTAT...CGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp TCCCTATGGCCTTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAATCCCATCAGGCACGCTaGAGCACTATATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: SLWPSPQLGGKRFAALMKSHQAR*STISCQ
Trigger: TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGA...TTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR GCA 90 bp AGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGATCAAGTGGCAAAAATaGAAGACGGTTTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RMEECAGLAGFPSVKLAAIKWQK*KTVSSH
Trigger: ATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGAT...CGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp CTCAGGCGCCCCACCCTGCTACTCAAGACCATTGAGGCCACGGGGTTTGCTGAACAAGGACCGGAAACTTaGTTTAAATTAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRRPTLLLKTIEATGFAEQGPET*FKLDLG
Trigger: CCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTG...TTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGTCAATTAAGTTCAGGTaGTGTACCCAAGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: EECAGLAGFPSVKLAALLSIKFR*CTQGLR
Trigger: CCTTAATCCTTGGGTACAGCACCTGAACTTAATTGA...CAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTATAGGCATGAGCCACTaGCGAGACTTGATTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSIGMSH*RDLIFR
Trigger: TCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTAT...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp ACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGAATGCTACACCTTCTaGCCATCCACCACACTCGCT +
Preference number: 4 (lower is better)
Translates to: TFLESSAVPPHWTGQDGRECYTF*PSTTLA
Trigger: AGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTC...TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp AAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAAGGCAGCTGGCAGAGATaGCGCGGCACATACCATAGA +
Preference number: 4 (lower is better)
Translates to: KRFAALMKRKAASPRKLEGSWQR*RGTYHR
Trigger: TCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCC...TTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp GAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ECAGLAGFPSVKLAALLRIVQIR*QAFQVN
Trigger: ATTCACCTGAAAGGCTTGCCATCTTATCTGTACAAT...CCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp AAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAAGGCCTTCACCTCAGCTaGGAGGAAAACGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: KRFAALMKRKAASPRKLEGLHLS*EENGSL
Trigger: CAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCC...TTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp GAGTGTTTATCAACTCAGCAGGTCAAAAGTCTGCAGACACTGGGTGGAGCAGCAGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: ECLSTQQVKSLQTLGGAAVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...TGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR CCA 90 bp ATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: IMTFLESSAVPPHWTGQDVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...ATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LNHDISREFCSAPALDRTDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGACAGTGCAGATACAGTaGGAACACACGGTAACTTTC +
Preference number: 4 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQTVQIQ*EHTVTF
Trigger: GAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGT...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR TCA 90 bp GACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: DISREFCSAPALDRTGWKRFGSF*ARFSGK
Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR TCA 90 bp TGGCGCGGCACATACCATAGACGATTTCGGTCCACAGTGAGGTACTGCAGAGAAAGAGAAAGGCACATGTaGAGCCTCTCGGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: WRGTYHRRFRSTVRYCRERERHM*SLSGKV
Trigger: AACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT...TTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp AAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCACCCGATGGCAAGCCTTTCAGGTaGATGTTGTTATCCACGTAT +
Preference number: 4 (lower is better)
Translates to: KQLHLGNLNGSTTATAPDGKPFR*MLLSTY
Trigger: ATACGTGGATAACAACATTCACCTGAAAGGCTTGCC...ATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp AGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCTGCAGAGGGAGGACGTaGTCATGCTCCGTCCCTATG +
Preference number: 4 (lower is better)
Translates to: SSRDRPKSSGKNARRFPACRGRT*SCSVPM
Trigger: CATAGGGACGGAGCATGATCACGTCCTCCCTCTGCA...GGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp TTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTTGGCACGGGCTGTACTTTaGATCATCCTGTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: FLPSPFYVDGVLSGQQVLARAVL*IILLKT
Trigger: GGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGC...CAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGCCTGAAGCACAATTGTaGAGTTTCATGCCACATTTT +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLEPEAQL*SFMPHF
Trigger: AAAATGTGGCATGAAACTTCACAATTGTGCTTCAGG...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR TCA 90 bp ATACAGTGGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGCTGGTCTCAAACTCCTaGCCTCAGATGATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IQWEHTVTFCLLHSTWTVLVSNS*PQMICP
Trigger: AGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAG...CACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATTCCCATCAGGCACGCTaGAGCACTATATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: AGFPSVKLAALLRFLSVYSHQAR*STISCQ
Trigger: TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGA...ATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447360.6
ENST00000558879.5
CDS-3UTR GCA 90 bp CCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATCAACTCAGCTCCCATCAGGCACGCTaGAGCACTATATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: PSVKLAALLRFLSVYQLSSHQAR*STISCQ
Trigger: TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGA...GCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR GCA 90 bp TGGCGCGGCACATACCATAGACGATTTCGGTCCACAGTGAGGTACTGCAGAGAAAGGAAAACGGTTCGCTaGCCTGATGAAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: WRGTYHRRFRSTVRYCRERKTVR*PDEKES
Trigger: GCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCT...TTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR GCA 90 bp TTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAAGCAGGTCAAAAGTCTaGAGACACTGGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FHWRHCGEHGLREITLWGSRSKV*RHWVEQ
Trigger: CTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCT...TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp ATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTGAATAAAAAGGAACAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: ILRGRCAFRAAGVVNKKEQDGRV*WTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG...TTCCTTTTTATTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560236.1
CDS-3UTR GCA 90 bp ATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAATTTCTAGAGAGTTCTaGAGTGCCCCCGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: MTFLESSAVPPHWTGQDGISREF*SAPALD
Trigger: GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT...TCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp GATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCTAAGATCCAGACATTaGAGTTTTACAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: DGRVCWTGWIPQCQAGSALRSRH*SFTRDP
Trigger: TGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAG...AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGATTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: SSIMTFLESSAVPPHWTGLDRTG*KSVLDW
Trigger: CCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAA...TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp TTATCAACTCAGCAGGTCAAAAGTCTGCAGACACTGGGTGGAGCAGCAGTAAGCTTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: LSTQQVKSLQTLGGAAVSLDRTG*KSVLDW
Trigger: CCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAA...GCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR CCA 90 bp ATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATTTGGACAGGACAGGATaGAAGAGTGTGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: IMTFLESSAVPPHWTGQDLDRTG*KSVLDW
Trigger: CCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAA...ATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp GTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCAGACTTTCTGTTTATaGACTTTTGCAGAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: VCWTGWIPQCQAGSAPEVQTFCL*TFAEVE
Trigger: TTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTG...AACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CAA 72 bp TTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTaGAGTGTTTATCAACTCAGCAGGTCAAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FPSVKLAALLRF*SVYQLSRSKVC
Trigger: GCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR TCA 90 bp ATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: ISREFCSAPALDRTGWKSRFGSF*ARFSGK
Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...ACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR TCA 90 bp TTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCGGGCAGCAGGTGTTGTTAGCTAATCGAAGATaGCGTAAAGCTCTCAGACGA +
Preference number: 4 (lower is better)
Translates to: FLPSPFYVDGVLSGQQVLLANRR*RKALRR
Trigger: TCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAA...CAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGCCACTGCACCCGATaGCTTTATTGTACAGATAAG +
Preference number: 4 (lower is better)
Translates to: DISREFCSAPALDRTGWKSHCTR*LYCTDK
Trigger: CTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCT...CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp TTCACCTCAGCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCAGCCACTGCACCCGATaGCTTTATTGTACAGATAAG +
Preference number: 4 (lower is better)
Translates to: FTSAGRKTVRCPDEKESSSHCTR*LYCTDK
Trigger: CTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCT...GCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp TGGCGCGGCACATACCATAGACGATTTCGGTCCACAGTGAGGTACTGCAGAGAAAGCCACTGCACCCGATaGCTTTATTGTACAGATAAG +
Preference number: 4 (lower is better)
Translates to: WRGTYHRRFRSTVRYCRESHCTR*LYCTDK
Trigger: CTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCT...TTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp ATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAACTTGGGGGAAGGGTaGAGGCATTTTAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: MTFLESSAVPPHWTGQDGNLGEG*RHFSSE
Trigger: TTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTT...TCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR TCA 90 bp AGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGCCTGAAGCACAATTGTaGAGTTTCATGCCACATTTT +
Preference number: 4 (lower is better)
Translates to: REFCSAPALDRTGWKSVLPEAQL*SFMPHF
Trigger: AAAATGTGGCATGAAACTTCACAATTGTGCTTCAGG...CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR TCA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACGGACAAGCTGGAATGTaGAAGGTCTTAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LKLNHDISREFCSAPALDGQAGM*KVLVRH
Trigger: GTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCC...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGTTTAAAAATTGGCTTTaGAAGTCCCCACAGACTACA +
Preference number: 4 (lower is better)
Translates to: ESSAVPPHWTGQDGRVCWFKNWL*KSPQTT
Trigger: TGTAGTCTGTGGGGACTTTCAAAGCCAATTTTTAAA...CCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp TTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGCCACCATTGACATTCTaGGCATTCACATGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: FLESSAVPPHWTGQDGRVPPLTF*AFTWFK
Trigger: CTTGAACCATGTGAATGCTCAGAATGTCAATGGTGG...CACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp TGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTTCAGCCATTTCTCTTaGATAAATACTCCACCATTG +
Preference number: 4 (lower is better)
Translates to: WTGWIPQCQAGSAPEVLEFSHFS*INTPPL
Trigger: CAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAA...CTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCAAGCAGGTCAAAAGTCTaGAGACACTGGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LALKLNHDISREFCSAPASRSKV*RHWVEQ
Trigger: CTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCT...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR GCA 90 bp GAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGGCTCACAAAAGTCTGTTaGTACACTGTAGAACGTATA +
Preference number: 4 (lower is better)
Translates to: ESSAVPPHWTGQDGRVCWLTKVC*YTVERI
Trigger: TATACGTTCTACAGTGTAGCAACAGACTTTTGTGAG...CCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp ATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTCACACGGTAACTTTCTaGCTTCTCCATTCTACGTGG +
Preference number: 4 (lower is better)
Translates to: ISREFCSAPALDRTGWKSHTVTF*LLHSTW
Trigger: CCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTG...ACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR GCA 90 bp CCATGGGAGCCTCACTTTGCTGCCAACTCAGGCGCCCCACCCTGCTACTCAAGACAAATTTTATCAGGTTaGAACATTAGTGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PWEPHFAANSGAPPCYSRQILSG*NISVGP
Trigger: TGGACCAACACTAATGTTGCAACCTGATAAAATTTG...TCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGGAAATAATCTCCGAATaGTACACCTTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: DISREFCSAPALDRTGWKEIISE*YTFCPS
Trigger: GGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTC...CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATCTGCAGACACTGGGTaGAGCAGCAGTAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LALKLNHDISREFCSAPASADTG*SSSKPQ
Trigger: TTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGA...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp CAGGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGTTCAAAAGGGAATCTaGCTAGATGATCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: QDRMEECAGLAGFPSVKLVQKGI*LDDQVT
Trigger: AGTGACTTGATCATCTAGCCAGATTCCCTTTTGAAC...CAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACATTCTTTCTGGCAGGGTaGAGGCTCACAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LNHDISREFCSAPALDRTFFLAG*RLTDFL
Trigger: CAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAA...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGCAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FLESSAVPPHWTGQDGRVQFHKV*KLLSKV
Trigger: AACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG...CACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR TCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQRFGSF*ARFSGK
Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR TCA 90 bp AGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCTTCACCTCGGAAACTTaGATGGGAGCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SSRDRPKSSGKNARRFPAFTSET*MGAPQP
Trigger: TGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAA...GGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp ACATACTGTAGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGACGGTGCAGAGGGAGGACGTaGTCATGCTCCGTCCCTATG +
Preference number: 4 (lower is better)
Translates to: TYCSSRDRPKSSGKNARRCRGRT*SCSVPM
Trigger: CATAGGGACGGAGCATGATCACGTCCTCCCTCTGCA...CCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAACTTGGGGGAAGGGTaGAGGCATTTTAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LKLNHDISREFCSAPALDNLGEG*RHFSSE
Trigger: TTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTT...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR TCA 90 bp CACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAAAGCAAGGGAGGTACGTGACTTCTTCATaGAGAGTTCTTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HCGEHGLREITLWGKQGRYVTSS*RVLSGR
Trigger: CCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTA...CCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACTCCCATCAGGCACGCTaGAGCACTATATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LKLNHDISREFCSAPALDSHQAR*STISCQ
Trigger: TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGA...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR GCA 90 bp AGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGACTATGTTATTTGAGTaGAGGTATAGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: REFCSAPALDRTGWKSVLTMLFE*RYSSTR
Trigger: CCTTGTGGAACTATACCTGCACTCAAATAACATAGT...CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGAGGAAAACGGTTCGCTaGCCTGATGAAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQRKTVR*PDEKES
Trigger: GCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCT...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp ATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCCAGGATGGAAGAGTGTaGTGGACTGGCTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: ILALKLNHDISREFCSAPQDGRV*WTGWIP
Trigger: GGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG...GGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR GCA 90 bp ACAGAAGACAAATGGGTCCTTAATTTGGGGGAGGATATATTCCAACTTGGGGGATTTCCAGAGGGTGTGTaGTCTGGGACCCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: TEDKWVLNLGEDIFQLGGFPEGV*SGTLTE
Trigger: CTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAA...TCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp ATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATAATGCAACCTCTTCCTaGCGGGTTCAAGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: IMTFLESSAVPPHWTGQDNATSS*RVQAIL
Trigger: GAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATT...ATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp GCTGGGAGGAAAACGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGCTAAGATCCAGACATTaGAGTTTTACAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AGRKTVRCPDEKESSFTSLRSRH*SFTRDP
Trigger: TGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAG...CGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR CCA 90 bp AAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGCACCACAGCCACTGCGCTCTAGGAGACTTCTaGGTAATGAGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: KRKAASPRKLEWEHHSHCALGDF*VMRLET
Trigger: TGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGC...GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR CCA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCGTGTGCTGGACTGGCTaGATTCCCCAGTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GILALKLNHDISREFCSAVCWTG*IPQCQA
Trigger: AGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp GACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAACACAGAAGACAAATaGGTCCTTAATTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DISREFCSAPALDRTGWKNTEDK*VLNLGE
Trigger: CTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTT...CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCAATGAAGAGTTCTTTCTaGCAGGGTGGAGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LALKLNHDISREFCSAPAMKSSF*QGGGSQ
Trigger: CTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCAT...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
3UTR CAA 72 bp GCAAGCTCTTTTCCTGACCGAGAGAATGTCAGTCACTaGGCTATGATCAATTCCTTTCCTAGAGACACCGGC +
Preference number: 4 (lower is better)
Translates to: ASSFPDRENVSH*AMINSFPRDTG
Trigger: GCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGCAAGCCTTTCAGGTaGATGTTGTTATCCACGTAT +
Preference number: 4 (lower is better)
Translates to: LNHDISREFCSAPALDRTGKPFR*MLLSTY
Trigger: ATACGTGGATAACAACATTCACCTGAAAGGCTTGCC...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp TGGCAAAAATGCAAGACGGTTTCCAGCCATGGAGAGCTCATTGAGGCTGGGCAGCACAACTATGTTATTTaGGTGCAGGTATCAAGGATG +
Preference number: 4 (lower is better)
Translates to: WQKCKTVSSHGELIEAGQHNYVI*VQVSRM
Trigger: CATCCTTGATACCTGCACTCAAATAACATAGTTGTG...CTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR GCA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA +
Preference number: 4 (lower is better)
Translates to: LKLNHDISREFCSAPALDEMSSV*SSFKSP
Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp TTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGGAGGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA +
Preference number: 4 (lower is better)
Translates to: FAALMKRKAASPRKLEWEEMSSV*SSFKSP
Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...CTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR GCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCAAGGAAAACGGTTCGCTaGCCTGATGAAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LALKLNHDISREFCSAPARKTVR*PDEKES
Trigger: GCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCT...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR GCA 90 bp GAATCACTTCACAGCAAGCAGATGAACATCTGGCAGCAAAGCAACATTAAAATGTCTACGTGGACGGTGTaGTTTCCGGGCAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ESLHSKQMNIWQQSNIKMSTWTV*FPGSRC
Trigger: ACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGA...CATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCACTGAGCAAGGTTTTCTaGCAAGGATGTCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LALKLNHDISREFCSAPALSKVF*QGCQGV
Trigger: AACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAG...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR CCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGATTACAAGAGACCCAATaGCTTCCGGAACCACAACTA +
Preference number: 4 (lower is better)
Translates to: SSIMTFLESSAVPPHWTGLQETQ*LPEPQL
Trigger: TAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAA...TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp AAGGCATTGTCACTAAGATCCAGACATTGGAGTTTTACAAGAGACCCAATGGCTCCTCGGAAACTTGAATaGGAGCACCACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KALSLRSRHWSFTRDPMAPRKLE*EHHSHC
Trigger: GCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGG...AGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR CCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGAGCTCTAGGAGACTTCTaGGTAATGAGATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SSIMTFLESSAVPPHWTGALGDF*VMRLET
Trigger: TGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGC...TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGGATATATTCCAACTTaGGGGAAGGGTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQGYIPT*GKGEGI
Trigger: AATGCCTTCACCCTTCCCCCAAGTTGGAATATATCC...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGAACGTATAAACAAGGCTaGAACTTTCCAGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSIMTFLESSAVPPHWTGTYKQG*NFPEGV
Trigger: CACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGT...TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGCCACTGCCGAGACTTaGTTTTTAGATAGACATAGA +
Preference number: 4 (lower is better)
Translates to: LNHDISREFCSAPALDRTATAET*FLDRHR
Trigger: TCTATGTCTATCTAAAAATCAAGTCTCGGCAGTGGC...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp GAAGGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGTGCAGCCCTGCCATTaGCGTCTCTCTCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EGILALKLNHDISREFCSVQPCH*RLSQGK
Trigger: TTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCAC...ACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp GAATCACTTCACAGCAAGCAGATGAACATCTGGCAGCAAAGCAACATTAAAATGGATGGAAGAGTGTGCTaGACTGGCTGGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ESLHSKQMNIWQQSNIKMDGRVC*TGWIPQ
Trigger: CTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC...CATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp AAAACACAGAAGACAAATGGGTCCTTAATTTGGGGGAGGATATATTCCAACTTGGCAGTGCCCCCGCATTaGACAGGACAGGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: KTQKTNGSLIWGRIYSNLAVPPH*TGQDGR
Trigger: TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGC...CAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp ATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAATGGGTCCTTAATTTaGGGGAGGATATATTCCAAC +
Preference number: 4 (lower is better)
Translates to: MTFLESSAVPPHWTGQDGNGSLI*GRIYSN
Trigger: GTTGGAATATATCCTCCCCCAAATTAAGGACCCATT...TCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp TTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAACTAGTCGGACAAGCTaGAATGTGAAAGGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: FHWRHCGEHGLREITLWGTSRTS*NVKGLS
Trigger: ACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGT...TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp GAAGGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGGCCACGGGGTTTGCTaGAACTCCTCAAAAACTGAC +
Preference number: 4 (lower is better)
Translates to: EGILALKLNHDISREFCSGHGVC*NSSKTD
Trigger: GTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCC...ACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp TTCCACTGGAGACACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGATTACCTGAACAGAGATaGTACTTTCCAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: FHWRHCGEHGLREITLWGLPEQR*YFPSSS
Trigger: TGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAA...TCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp AGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACTGTTTATGGACTTTTaGAGAAGTCGAAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSIMTFLESSAVPPHWTGLFMDF*RSRRLN
Trigger: ATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAG...TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp AAAACACAGAAGACAAATGGGTCCTTAATTTGGGGGAGGATATATTCCAACTTGTGCCCAAAGGTTGTCTaGCCAGCCCACTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KTQKTNGSLIWGRIYSNLCPKVV*PAHCCC
Trigger: ACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCA...CAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp ATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAACTCCAAATGAATGTTaGCATAATTTTTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: MTFLESSAVPPHWTGQDGTPNEC*HNFSEA
Trigger: GGCCTCTGAAAAATTATGGCAACATTCATTTGGAGT...TCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGCTAAGATCCAGACATTaGAGTTTTACAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQLRSRH*SFTRDP
Trigger: TGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAG...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp ACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TFLESSAVPPHWTGQDGRIVQIR*QAFQVN
Trigger: ATTCACCTGAAAGGCTTGCCATCTTATCTGTACAAT...TCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp TATACATACTGTAGTTCTCGAGATCGACCTAAATCAAGTGGCAAAAATGCAAGAGGCCTTCACCTCAGCTaGGAGGAAAACGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: YTYCSSRDRPKSSGKNARGLHLS*EENGSL
Trigger: CAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCC...TCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp AAAACACAGAAGACAAATGGGTCCTTAATTTGGGGGAGGATATATTCCAACTTGACAGTTGTCTTCCACTaGTGCAGCCCTGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: KTQKTNGSLIWGRIYSNLTVVFH*CSPAIG
Trigger: GCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGT...CAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
3UTR CAA 72 bp AGGGTGGAGGCTCACAGACTTTCTGTTTATGGACTTTaGCAGAAGTCGAAGGCTGAATTTGGACCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RVEAHRLSVYGL*QKSKAEFGPAF
Trigger: AAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR TCA 90 bp ACAGATAAGATGGCAAGCCTTTCAGGTGAATGTTGTTATCCACGTATACATACTGATTTCGGTCCACAGTaGGGTACTGCAGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TDKMASLSGECCYPRIHTDFGPQ*GTAEKG
Trigger: GCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATC...AGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCAGCCACTGCACCCGATaGCTTTATTGTACAGATAAG +
Preference number: 4 (lower is better)
Translates to: GILALKLNHDISREFCSASHCTR*LYCTDK
Trigger: CTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCT...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR TCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGAGTCTGGCTAACCCTTaGAAGTCTCTTAATTACATA +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQSLANP*KSLNYI
Trigger: TATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACT...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp ATCCAGACATTGGAGTTTTACAAGAGACCCAATGGCTTCCGGAACCACAACTATGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA +
Preference number: 4 (lower is better)
Translates to: IQTLEFYKRPNGFRNHNYEMSSV*SSFKSP
Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...ATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
CDS-3UTR GCA 90 bp AAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCATGGAGAGCTCATTGAGGATCAAGTGGCAAAAATaGAAGACGGTTTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KSSGKNARRFPAMESSLRIKWQK*KTVSSH
Trigger: ATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGAT...CCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCGGATATATTCCAACTTaGGGGAAGGGTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: GILALKLNHDISREFCSAGYIPT*GKGEGI
Trigger: AATGCCTTCACCCTTCCCCCAAGTTGGAATATATCC...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CCA 90 bp ATTGTCACTAAGATCCAGACATTGGAGTTTTACAAGAGACCCAATGGCTTCCGGCAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: IVTKIQTLEFYKRPNGFRQFHKV*KLLSKV
Trigger: AACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG...CCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS-3UTR GCA 90 bp AAACGATTGGTAGAAATGTCTAGTGTCTGCAGCTCCTTCAAATCGCCAACCTCTATCAAGTGGCAAAAATaGAAGACGGTTTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KRLVEMSSVCSSFKSPTSIKWQK*KTVSSH
Trigger: ATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGAT...AGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR GCA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGTCAGATTTGCTTTTCTaGAAAGCTTTGGACACAATT +
Preference number: 4 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQSDLLF*KALDTI
Trigger: AATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGA...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp TCTAAGGCATTGTCACTAAGATCCAGACATTGGAGTTTTACAAGAGACCCAATGCTGAGCAAGGTTTTCTaGCAAGGATGTCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SKALSLRSRHWSFTRDPMLSKVF*QGCQGV
Trigger: AACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAG...CATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS-3UTR CCA 90 bp AATGGGAGCACCACAGCCACTGCACCCGATGACTTTATTGTACAGATAAGATGGATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: NGSTTATAPDDFIVQIRWIVQIR*QAFQVN
Trigger: ATTCACCTGAAAGGCTTGCCATCTTATCTGTACAAT...CCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp ATTTCTGGGCAAACAATTTCTAAGGCATTGTCACTAAGATCCAGACATTGGAGTAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: ISGQTISKALSLRSRHWSRFGSF*ARFSGK
Trigger: CTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCT...ACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS-3UTR GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTGCAGCTCCACTATGTTATTTGAGTaGAGGTATCAAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LSGKVSKRLVEMSSVCSSTMLFE*RYQGCQ
Trigger: CTGACATCCTTGATACCTGCACTCAAATAACATAGT...GGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR CCA 90 bp AGTGCAGCAGCTCTAGGAGACTTCTGGGTAATGAGATTGGAGACAGAAAGTTCAATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SAAALGDFWVMRLETESSIVQIR*QAFQVN
Trigger: ATTCACCTGAAAGGCTTGCCATCTTATCTGTACAAT...TGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS-3UTR CCA 90 bp TTCCACTTCTCATCAATTAAGTTCAGGTGCTGTACCCAAGGATTAAGGTTGAGATACCAAGCAAATTCTTaGTTCTCCATTCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FHFSSIKFRCCTQGLRLRYQANS*FSIQPC
Trigger: GCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTA...TCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR GCA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCACTATGTTATTTGAGTaGAGGTATAGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GILALKLNHDISREFCSATMLFE*RYSSTR
Trigger: CCTTGTGGAACTATACCTGCACTCAAATAACATAGT...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp ATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGGTAGGAATTGCAGTTaGTTATTAGCTAATCGAAGA +
Preference number: 4 (lower is better)
Translates to: ILALKLNHDISREFCSAPGRNCS*LLANRR
Trigger: TCTTCGATTAGCTAATAACCAACTGCAATTCCTACC...GGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCATATCTTGTCAAAATTaGTCCATTTCCGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: GILALKLNHDISREFCSAISCQN*SISGIR
Trigger: CCTGATACCGGAAATGGACCAATTTTGACAAGATAT...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR TCA 90 bp GAATGTTGTTATCCACGTATACATACTGTAGTTCTCGAGATCGACCTAAATCAAGGCAAGCCTTTCAGGTaGATGTTGTTATCCACGTAT +
Preference number: 4 (lower is better)
Translates to: ECCYPRIHTVVLEIDLNQGKPFR*MLLSTY
Trigger: ATACGTGGATAACAACATTCACCTGAAAGGCTTGCC...TTGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR TCA 90 bp GAAGATGACGTAAAGCTCTCAGACGACCAATTTCTGGGCAAACAATTTCTAAGGCACAACTATGTTATTTaGGTGCAGGTATCTCAATTC +
Preference number: 4 (lower is better)
Translates to: EDDVKLSDDQFLGKQFLRHNYVI*VQVSQF
Trigger: GAATTGAGATACCTGCACTCAAATAACATAGTTGTG...CCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS-3UTR GCA 90 bp ATGTTGTTATCCACGTATACATACTGTAGTTCTCGAGATCGACCTAAATCAAGTGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCA +
Preference number: 4 (lower is better)
Translates to: MLLSTYTYCSSRDRPKSSEMSSV*SSFKSP
Trigger: TGGCGATTTGAAGGAGCTGCAGACACTAGACATTTC...ACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CCA 90 bp AAGGCATTGTCACTAAGATCCAGACATTGGAGTTTTACAAGAGACCCAATGGCTGGTAGGAATTGCAGTTaGTTATTAGCTAATCGAAGA +
Preference number: 4 (lower is better)
Translates to: KALSLRSRHWSFTRDPMAGRNCS*LLANRR
Trigger: TCTTCGATTAGCTAATAACCAACTGCAATTCCTACC...AGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
CDS-3UTR CCA 90 bp GAAGGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTAATGGGTCCTTAATTTaGGGGAGGATATATTCCAAC +
Preference number: 4 (lower is better)
Translates to: EGILALKLNHDISREFCSNGSLI*GRIYSN
Trigger: GTTGGAATATATCCTCCCCCAAATTAAGGACCCATT...ACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CCA 90 bp ATTTCTGGGCAAACAATTTCTAAGGCATTGTCACTAAGATCCAGACATTGGAGTCTAAGATCCAGACATTaGAGTTTTACAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: ISGQTISKALSLRSRHWSLRSRH*SFTRDP
Trigger: TGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAG...ACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
CDS-3UTR CCA 90 bp GAAGGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGGTAGGAATTGCAGTTaGTTATTAGCTAATCGAAGA +
Preference number: 4 (lower is better)
Translates to: EGILALKLNHDISREFCSGRNCS*LLANRR
Trigger: TCTTCGATTAGCTAATAACCAACTGCAATTCCTACC...ACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CCA 90 bp AAAACACAGAAGACAAATGGGTCCTTAATTTGGGGGAGGATATATTCCAACTTGCTCATGAGGCTATCCTaGACTTTAAAACTTATCGCT +
Preference number: 4 (lower is better)
Translates to: KTQKTNGSLIWGRIYSNLLMRLS*TLKLIA
Trigger: AGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAG...CAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CCA 90 bp GGGCAAACAATTTCTAAGGCATTGTCACTAAGATCCAGACATTGGAGTTTTACAGGTAGGAATTGCAGTTaGTTATTAGCTAATCGAAGA +
Preference number: 4 (lower is better)
Translates to: GQTISKALSLRSRHWSFTGRNCS*LLANRR
Trigger: TCTTCGATTAGCTAATAACCAACTGCAATTCCTACC...TGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
CDS CCA 90 bp CCCAGGGGCCGCGGGCCGCAGAGTGGGAGGAGGACCCGGCAGCTGTaGCCACCCGAGGCCCGGACGGCTCCGCTGTCCCACTCGCCGCGA +
Preference number: 5 (lower is better)
Translates to: PRGRGPQSGRRTRQL*PPEARTAPLSHSPR
Trigger: TCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGTCCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS CCA 90 bp TCCGGTATCAGGGTTCTCGGGTCCCAGGGGCCGCGGGCCGCAGAGTaGGAGGAGGACCCGGCAGCTGTGGCCACCCGAGGCCCGGACGGC +
Preference number: 5 (lower is better)
Translates to: SGIRVLGSQGPRAAE*EEDPAAVATRGPDG
Trigger: GCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGTCCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR CAA 90 bp GTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCGCGACCCGGACGCTTaGGCAGGACCACGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VCWTGWIPQCQAGSAPEVRDPDA*AGPRLG
Trigger: CCCCAGACGTGGTCCTGCCAAAGCGTCCGGGTCGCG...AACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR CAA 90 bp GCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGAGAGCCTCGCCACTaGAATCACCCGACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: AGLAGFPSVKLAALLRFLREPRH*NHPTRR
Trigger: CCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCT...CAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR CAA 90 bp TGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTTGCAGTGCCCCCGCATaGGACAGGACAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: CWTGWIPQCQAGSAPEVLCSAPA*DRTGWK
Trigger: CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCA...AAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CAA 90 bp ACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTGCAGTGCCCCCGCATaGGACAGGACAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: TGWIPQCQAGSAPEVLECCSAPA*DRTGWK
Trigger: CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCA...ACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS GCA 90 bp CCTGGGTGTAAACCCTGGTGCCCACTTAGGCATGATTACCACTGGTaGAGCCCTGCCATTGGCGTCTCTCTCAAGGGAAAGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGCKPWCPLRHDYHW*SPAIGVSLKGKSLG
Trigger: CCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGTAATCATGCCTAAGTGGGCACCAGGGTTTACACCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS-3UTR CAA 90 bp CTGGGCAGCTGGCAGAGATGGCGCGGCACATACCATAGACGATTTCGGTCCACACTTCACCTCGGAAACTaGAATGGGAGCACCACAGCC +
Preference number: 5 (lower is better)
Translates to: LGSWQRWRGTYHRRFRSTLHLGN*NGSTTA
Trigger: GGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAG...TGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CAA 90 bp ACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTGCTACTCAAGACCATaGAGGCCACGGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: TGWIPQCQAGSAPEVLECCYSRP*RPRGLL
Trigger: CAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCA...ACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp GGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCCATGGGAGCCTCACTTaGCTGCCAACTCAGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GTHGNFLPSPFYVDGVLSHGSLT*LPTQAP
Trigger: GGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATG...GGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS CCA 90 bp TTGCCTGGGTGTAAACCCTGGTGCCCACTTAGGCATGATTACCACTaGTGCAGCCCTGCCATTGGCGTCTCTCTCAAGGGAAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LPGCKPWCPLRHDYH*CSPAIGVSLKGKSL
Trigger: CAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGTAATCATGCCTAAGTGGGCACCAGGGTTTACACCCAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS-3UTR CAA 90 bp GGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTTGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: GRVCWTGWIPQCQAGSAPCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
CDS-3UTR CAA 90 bp GCAGAGGGAGGACGTGATCATGCTCCGTCCCTATGGCCTTCACCTCAGCTGGGATGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: AEGGRDHAPSLWPSPQLGCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...TCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CAA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGCGCTCCTGAGGTTCTaGAGTGTTTATCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSALLRF*SVYQLS
Trigger: GCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGC...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
ENST00000560236.1
CDS-3UTR CAA 90 bp CTGGGCAGCTGGCAGAGATGGCGCGGCACATACCATAGACGATTTCGGTCCACATGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: LGSWQRWRGTYHRRFRSTCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...TGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CAA 90 bp GATACAGTGGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGGTGCAGCCCTGCCATaGGCGTCTCTCTCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: DTVGTHGNFLPSPFYVDGGAALP*ASLSRE
Trigger: TTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACC...ACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CAA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACATGCAGTGCCCCCGCATaGGACAGGACAGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: LNHDISREFCSAPALDRTCSAPA*DRTGWK
Trigger: CTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCA...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CAA 90 bp AGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGAGTCGAAGGCTGAATTaGGACCTGCTTTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: RVCWTGWIPQCQAGSAPESRRLN*DLLFLY
Trigger: ATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACT...CTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp GATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCTACCAAGCAAATTCTaGGTTCTCCATTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DGRVCWTGWIPQCQAGSALPSKF*VLHSAL
Trigger: CAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAG...AGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp ACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGTGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: TGWKSVLDWLDSPVSSWQCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
CDS TCA 90 bp CTCACAGCCCGTGTCAAGACAATGATGAGACAAGGCCTCTGCCATTaGGAAGCATATCACACACAACCGACGAGGTGCAAGAGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: LTARVKTMMRQGLCH*EAYHTQPTRCKRSS
Trigger: TGAGCTCCTCTTGCACCTCGTCGGTTGTGTGTGATATGCTTCTCAATGGCAGAGGCCTTGTCTCATCATTGTCTTGACACGGGCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS-3UTR CAA 90 bp GAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGCCACAACTATGTTATTaGAGTGCAGGTATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: EECAGLAGFPSVKLAALLPQLCY*SAGIVP
Trigger: TGGAACTATACCTGCACTCAAATAACATAGTTGTGG...CAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CAA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACCTTCACCTCGGAAACTaGAATGGGAGCACCACAGCC +
Preference number: 5 (lower is better)
Translates to: LKLNHDISREFCSAPALDLHLGN*NGSTTA
Trigger: GGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAG...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CAA 90 bp TGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTTCTGTTTATGGACTTTaGCAGAAGTCGAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: CWTGWIPQCQAGSAPEVLSVYGL*QKSKAE
Trigger: TTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGA...AAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS TCA 90 bp TGCCTTCAGCTTTGGAGCTTGCTGGCATCGTTCTATGTACCATGGTaGTTGCAGGCACTTTATTCGCCACCCACTGCACCCGATGACTTT +
Preference number: 5 (lower is better)
Translates to: CLQLWSLLASFYVPW*LQALYSPPTAPDDF
Trigger: AAAGTCATCGGGTGCAGTGGGTGGCGAATAAAGTGCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS-3UTR CAA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTCTGCAGCACTATATCTaGTCAAAATTGGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSLQHYI*SKLVHF
Trigger: GAAATGGACCAATTTTGACAAGATATAGTGCTGCAG...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
CDS-3UTR CAA 90 bp GGACAGGATGGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCCTGCAGCACTATATCTaGTCAAAATTGGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: GQDGRVCWTGWIPQCQAGLQHYI*SKLVHF
Trigger: GAAATGGACCAATTTTGACAAGATATAGTGCTGCAG...GCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000558879.5
CDS-3UTR CAA 90 bp GGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTCCACAACTATGTTATTaGAGTGCAGGTATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: GLAGFPSVKLAALLRFLSPQLCY*SAGIVP
Trigger: TGGAACTATACCTGCACTCAAATAACATAGTTGTGG...ACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CAA 90 bp GGAAGAGTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTAAAGTTAGCAAACGATaGGTAGAAATGTCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: GRVCWTGWIPQCQAGSAPKVSKR*VEMSSV
Trigger: GACACTAGACATTTCTACCAATCGTTTGCTAACTTT...AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CAA 90 bp GGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATCAAGCGCTCCTGAGGTTCTaGAGTGTTTATCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: GFPSVKLAALLRFLSVYQALLRF*SVYQLS
Trigger: GCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGC...TTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447360.6
ENST00000558879.5
CDS-3UTR CAA 90 bp TGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTTGCTTTAAATTAGATTaGGGGAGGCCCATCAATCTA +
Preference number: 5 (lower is better)
Translates to: CWTGWIPQCQAGSAPEVLCFKLD*GRPINL
Trigger: TAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCA...AAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp GTGTGCTGGACTGGCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCAAGCCAGGGTTCTTTaGAATAGGGATCATTTAATT +
Preference number: 5 (lower is better)
Translates to: VCWTGWIPQCQAGSAPEVQARVL*NRDHLI
Trigger: AATTAAATGATCCCTATTCAAAAGAACCCTGGCTTG...AACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp AGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGATGGAAGAGTGTGCTGCTGCAGCACTATATCTaGTCAAAATTGGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: REFCSAPALDRTGWKSVLLQHYI*SKLVHF
Trigger: GAAATGGACCAATTTTGACAAGATATAGTGCTGCAG...CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR CAA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGGCGCTCCTGAGGTTCTaGAGTGTTTATCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQALLRF*SVYQLS
Trigger: GCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGC...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS TCA 90 bp GTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTaGATGGGAGCACCACAGCTGCAGAAAGACACACATTCACAGTAT +
Preference number: 5 (lower is better)
Translates to: VRCPDEKESSFTSET*MGAPQLQKDTHSQY
Trigger: ATACTGTGAATGTGTGTCTTTCTGCAGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560483.1
CDS-3UTR CAA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACTGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: LKLNHDISREFCSAPALDCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
CDS-3UTR CAA 90 bp ATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATCAACTTGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: IPQCQAGSAPEVLECLSTCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...AGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR CAA 90 bp TTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCAGCGCTCCTGAGGTTCTaGAGTGTTTATCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: LALKLNHDISREFCSAPAALLRF*SVYQLS
Trigger: GCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGC...TGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301981.8
ENST00000331450.9
ENST00000447360.6
ENST00000560236.1
CDS-3UTR CAA 90 bp TTCCACTTCTCATCAATTAAGTTCAGGTGCTGTACCCAAGGATTAAGGTTGAGAGAGACTGCCCAAAGGTaGTCTGCCCAGCCCACTGCT +
Preference number: 5 (lower is better)
Translates to: FHFSSIKFRCCTQGLRLRETAQR*SAQPTA
Trigger: AGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTC...TCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACATCAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LNHDISREFCSAPALDRTSVPQG*EASEQG
Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGA...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCACAGCCCGTGTCAAGACAA +
Preference number: 5 (lower is better)
Translates to: LSGKVSKRLVEMSSV*SSFKSPTSQPVSRQ
Trigger: TTGTCTTGACACGGGCTGTGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCAAGGATGTCAGGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LSGKVSKRLVEMSSV*SSFKSPTSRMSGSS
Trigger: GGAACTCCCTGACATCCTTGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558471.5
CDS CCA 90 bp GAAGGTTTTGGTGTGGGAAAAAGTGCCTTCAGCTTTGGAGCTTGCTaGCATCGTTCTATGTACCATGGTGATTGCAGGCACTTTATTCGC +
Preference number: 5 (lower is better)
Translates to: EGFGVGKSAFSFGAC*HRSMYHGDCRHFIR
Trigger: GCGAATAAAGTGCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAAACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CCA 90 bp GCTGTGGCACTTGACTGCTATGGCATCACGGTGATTCCAAGTTTGTaGGGTGAGATGGCTTCTTTTGACTGTGCTGAAGAGATTCTGAAA +
Preference number: 5 (lower is better)
Translates to: AVALDCYGITVIPSL*GEMASFDCAEEILK
Trigger: TTTCAGAATCTCTTCAGCACAGTCAAAAGAAGCCATCTCACCCCACAAACTTGGAATCACCGTGATGCCATAGCAGTCAAGTGCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561431.1
CDS-3UTR CAA 90 bp ATACAGTGGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGATAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: IQWEHTVTFCLLHSTWTVIVPQG*EASEQG
Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTAT...CACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp CTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAATAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LNHDISREFCSAPALDRTIVPQG*EASEQG
Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTAT...TGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CAA 90 bp AAAACACAGAAGACAAATGGGTCCTTAATTTGGGGGAGGATATATTCCAACTTGGGTGCAGCCCTGCCATaGGCGTCTCTCTCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: KTQKTNGSLIWGRIYSNLGAALP*ASLSRE
Trigger: TTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACC...CAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CAA 90 bp GGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGTGCTTTCCCCTCACAAAAGTCTGTaGCTACACTGTAGAACGTAT +
Preference number: 5 (lower is better)
Translates to: GTHGNFLPSPFYVDGVLSPHKSL*LHCRTY
Trigger: ATACGTTCTACAGTGTAGCAACAGACTTTTGTGAGG...GGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp CACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAAAGCAAGGGAGGTGCACGGGCTGTACTTaGAATCATCCTGTTAAAAAC +
Preference number: 5 (lower is better)
Translates to: HCGEHGLREITLWGKQGRCTGCT*NHPVKN
Trigger: GTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCA...CCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp CTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACCCTGTATTTTCTCAGTaGCATCTGGGCAGTAAGCTA +
Preference number: 5 (lower is better)
Translates to: LKLNHDISREFCSAPALDPVFSQ*HLGSKL
Trigger: TAGCTTACTGCCCAGATGCAACTGAGAAAATACAGG...GTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCTGGTCTATTTGATGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSGKVSKRLVEMSSV*SSFKSPTSGLFDGP
Trigger: TGGCCCATCAAATAGACCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558248.5
CDS CCA 90 bp GCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATaGGAGCACCACAGCTGCAGAAAGACACACATTCACAGTATTATT +
Preference number: 5 (lower is better)
Translates to: AALMKRKAASPRKLE*EHHSCRKTHIHSII
Trigger: AATAATACTGTGAATGTGTGTCTTTCTGCAGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560483.1
CDS-3UTR CAA 90 bp CGGTTCGCTGCCCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTGAATGGCTGCAGCACTATATCTaGTCAAAATTGGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: RFAALMKRKAASPRKLEWLQHYI*SKLVHF
Trigger: GAAATGGACCAATTTTGACAAGATATAGTGCTGCAG...CCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CAA 90 bp GCTGGATTCCCCAGTGTCAAGCTGGCAGCGCTCCTGAGGTTCTTGAGTGTTTATAAAGTTAGCAAACGATaGGTAGAAATGTCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: AGFPSVKLAALLRFLSVYKVSKR*VEMSSV
Trigger: GACACTAGACATTTCTACCAATCGTTTGCTAACTTT...ATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447360.6
CDS-3UTR CAA 90 bp GAAGGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTCTTCACCTCGGAAACTaGAATGGGAGCACCACAGCC +
Preference number: 5 (lower is better)
Translates to: EGILALKLNHDISREFCSLHLGN*NGSTTA
Trigger: GGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAG...ACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000447360.6
CDS-3UTR CAA 90 bp ATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCTTGAGGCCACGGGGTTaGCTGAAACTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: ILALKLNHDISREFCSAPLRPRG*LKLLKN
Trigger: GTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAA...GGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS-3UTR CAA 90 bp CACTGTGGAGAACATGGTCTCAGGGAAATAACTCTCTGGGGAAAGCAAGGGAGGGAGAATGTCAGTCACTaGGCTATGATCAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: HCGEHGLREITLWGKQGRENVSH*AMINSF
Trigger: AAAGGAATTGATCATAGCCAAGTGACTGACATTCTC...CCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS GCA 90 bp TCTGAAGGTTTTGGTGTGGGAAAAAGTGCCTTCAGCTTTGGAGCTTaGTGGCATCGTTCTATGTACCATGGTGATTGCAGGCACTTTATT +
Preference number: 5 (lower is better)
Translates to: SEGFGVGKSAFSFGA*WHRSMYHGDCRHFI
Trigger: AATAAAGTGCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAAACCTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CCA 90 bp TTGAGTGCAGGTATCTCAATTCAAGTTCCACAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTTTTCTGGCAAGGATGTCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: LSAGISIQVPQFHKV*KLLSKVFWQGCQGV
Trigger: AACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTGGAACTTGAATTGAGATACCTGCACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS-3UTR CAA 90 bp GTGTTTATCAACTCAGCAGGTCAAAAGTCTGCAGACACTGGGTGGAGCAGCAGTCTGCAGCACTATATCTaGTCAAAATTGGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: VFINSAGQKSADTGWSSSLQHYI*SKLVHF
Trigger: GAAATGGACCAATTTTGACAAGATATAGTGCTGCAG...ACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558879.5
CDS-3UTR CAA 90 bp ATACAGTGGGAACACACGGTAACTTTCTGCCTTCTCCATTCTACGTGGACGGTGAAATGGGTCCTTAATTaGGGGGAGGATATATTCCAA +
Preference number: 5 (lower is better)
Translates to: IQWEHTVTFCLLHSTWTVKWVLN*GEDIFQ
Trigger: TTGGAATATATCCTCCCCCAAATTAAGGACCCATTT...CACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CAA 90 bp TCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCCCCGCATTGGACAGGACAGAAATGGGTCCTTAATTaGGGGGAGGATATATTCCAA +
Preference number: 5 (lower is better)
Translates to: SIMTFLESSAVPPHWTGQKWVLN*GEDIFQ
Trigger: TTGGAATATATCCTCCCCCAAATTAAGGACCCATTT...CTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000560236.1
CDS-3UTR CAA 90 bp AAACGATTGGTAGAAATGTCTAGTGTCTGCAGCTCCTTCAAATCGCCAACCTCTACAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: KRLVEMSSVCSSFKSPTSTVPQG*EASEQG
Trigger: ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGT...AGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCTTATGGAACAACACACATC +
Preference number: 5 (lower is better)
Translates to: LSGKVSKRLVEMSSV*SSFKSPTSYGTTHI
Trigger: GATGTGTGTTGTTCCATAAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559399.5
CDS CCA 90 bp TCGGCCTTACCCACTGCACCCGATGACTTTATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAATGTTGTTATCCACGTATACATACTG +
Preference number: 5 (lower is better)
Translates to: SALPTAPDDFIVQIR*QAFQVNVVIHVYIL
Trigger: CAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGGTAAGGCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558248.5
CDS GCA 90 bp ACAAGAGACCCAATGGCTTCCGGAACCACAACTATGTTATTTGAGTaGAGGTATCTCAATTCAAGTTCCACAGTTCCACAAGGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TRDPMASGTTTMLFE*RYLNSSSTVPQGLE
Trigger: TTCCAAACCTTGTGGAACTGTGGAACTTGAATTGAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS CCA 90 bp TATTCGCCACCCACTGCACCCGATGACTTTATTGTACAGATAAGATaGCAAGCCTTTCAGGTGAATGTTGTTATCCACGTATACATACTG +
Preference number: 5 (lower is better)
Translates to: YSPPTAPDDFIVQIR*QAFQVNVVIHVYIL
Trigger: CAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGGTGGCGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS-3UTR CAA 90 bp ATCGAAGATGACGTAAAGCTCTCAGACGACCAATTTCTGGGCAAACAATTTCTATGTGCTTTTCTAGCCTaGCCACAGAGATCGTCTTAC +
Preference number: 5 (lower is better)
Translates to: IEDDVKLSDDQFLGKQFLCAFLA*PQRSSY
Trigger: GTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACA...TAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559433.5
ENST00000561253.5
CDS-3UTR CAA 90 bp AAATCAAGTGGCAAAAATGCAAGACGGTTTCCAGCCATGGAGAGCTCATTGAGGCCACAACTATGTTATTaGAGTGCAGGTATCAAGGAT +
Preference number: 5 (lower is better)
Translates to: KSSGKNARRFPAMESSLRPQLCY*SAGIKD
Trigger: ATCCTTGATACCTGCACTCAAATAACATAGTTGTGG...CCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559433.5
CDS CCA 90 bp CTTTTCAAAGTGAACAGATGCTATCCCGGGTTCCTTCATAAAACCTaGCCCAGCAATCTAAACTCATCAGTTGGAACTCAGCTAAATCAT +
Preference number: 5 (lower is better)
Translates to: LFKVNRCYPGFLHKT*PSNLNSSVGTQLNH
Trigger: ATGATTTAGCTGAGTTCCAACTGATGAGTTTAGATTGCTGGGCCAGGTTTTATGAAGGAACCCGGGATAGCATCTGTTCACTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560483.1
CDS-3UTR CAA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTGCAGCTCCAAAGTTAGCAAACGATaGGTAGAAATGTCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: LSGKVSKRLVEMSSVCSSKVSKR*VEMSSV
Trigger: GACACTAGACATTTCTACCAATCGTTTGCTAACTTT...GGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CAA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCGTTGCAACATTAGTGTaGGTCCAGTTAGAAATCCAT +
Preference number: 5 (lower is better)
Translates to: GILALKLNHDISREFCSAVATLV*VQLEIH
Trigger: ATGGATTTCTAACTGGACCAACACTAATGTTGCAAC...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301981.8
CDS TCA 90 bp TTTTACAAGAGACCCAATGGCTTCCGGAACCACAACTATGTTATTTaGGTGCAGGTATCTCAATTCAAGTTCCACAGTTCCACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: FYKRPNGFRNHNYVI*VQVSQFKFHSSTRF
Trigger: AAACCTTGTGGAACTGTGGAACTTGAATTGAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS GCA 90 bp CTCTCGGGTAAAGTTAGCAAACGATTGGTAGAAATGTCTAGTGTCTaGAGCTCCTTCAAATCGCCAACCTCTACAACCAAAATCAAAATT +
Preference number: 5 (lower is better)
Translates to: LSGKVSKRLVEMSSV*SSFKSPTSTTKIKI
Trigger: AATTTTGATTTTGGTTGTAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559819.5
CDS-3UTR CAA 90 bp GGCATTTTAGCTCTGAAGCTCAATCATGACATTTCTAGAGAGTTCTGCAGTGCCTATATCTTGTCAAAATaGGTCCATTTCCGGTATCAG +
Preference number: 5 (lower is better)
Translates to: GILALKLNHDISREFCSAYILSK*VHFRYQ
Trigger: CTGATACCGGAAATGGACCAATTTTGACAAGATATA...GGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS-3UTR CAA 90 bp AGCCTTTCAGGTGAATGTTGTTATCCACGTATACATACTGTAGTTCTCGAGATCAAAGTTAGCAAACGATaGGTAGAAATGTCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: SLSGECCYPRIHTVVLEIKVSKR*VEMSSV
Trigger: GACACTAGACATTTCTACCAATCGTTTGCTAACTTT...GATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558471.5
ENST00000559433.5
CDS-3UTR CAA 90 bp CAAACAATTTCTAAGGCATTGTCACTAAGATCCAGACATTGGAGTTTTACAAGACCACAACTATGTTATTaGAGTGCAGGTATCTCAATT +
Preference number: 5 (lower is better)
Translates to: QTISKALSLRSRHWSFTRPQLCY*SAGISI
Trigger: AATTGAGATACCTGCACTCAAATAACATAGTTGTGG...TCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS CCA 72 bp CGCGGGCCGCAGAGTGGGAGGAGGACCCGGCAGCTGTaGCCACCCGAGGCCCGGACGGCTCCGCTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: RGPQSGRRTRQL*PPEARTAPLSH
Trigger: GTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGTCCTCCTCCCACTCTGCGGCCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS CAA 72 bp CGGCTCCGCTGTCCCACTCGCCGCGACCCGGACGCTTaGGCAGGACCACGTCTGGGGCGTCCCCGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: RLRCPTRRDPDA*AGPRLGRPRRG
Trigger: CCCCCGGCGGGGACGCCCCAGACGTGGTCCTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331450.9
CDS GCA 72 bp CCCACCTGCCACCCCTTGCCTGGGTGTAAACCCTGGTaGCCACTTAGGCATGATTACCACTGGTGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: PTCHPLPGCKPW*PLRHDYHWCSP
Trigger: AGGGCTGCACCAGTGGTAATCATGCCTAAGTGGGCACCAGGGTTTACACCCAGGCAAGGGGTGGCAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS CCA 72 bp CTCCCCACCTGCCACCCCTTGCCTGGGTGTAAACCCTaGTGCCCACTTAGGCATGATTACCACTGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LPTCHPLPGCKP*CPLRHDYHWCS
Trigger: GCTGCACCAGTGGTAATCATGCCTAAGTGGGCACCAGGGTTTACACCCAGGCAAGGGGTGGCAGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS GCA 72 bp AAACCCTGGTGCCCACTTAGGCATGATTACCACTGGTaGAGCCCTGCCATTGGCGTCTCTCTCAAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: KPWCPLRHDYHW*SPAIGVSLKGK
Trigger: CTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGTAATCATGCCTAAGTGGGCACCAGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS CCA 72 bp TGTAAACCCTGGTGCCCACTTAGGCATGATTACCACTaGTGCAGCCCTGCCATTGGCGTCTCTCTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: CKPWCPLRHDYH*CSPAIGVSLKG
Trigger: TCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGTAATCATGCCTAAGTGGGCACCAGGGTTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS GCA 72 bp GGAGCTTGCTGGCATCGTTCTATGTACCATGGTGATTaGAGGCACTTTATTCGCCACCCACTGCACCCGATG +
Preference number: 6 (lower is better)
Translates to: GACWHRSMYHGD*RHFIRHPLHPM
Trigger: CATCGGGTGCAGTGGGTGGCGAATAAAGTGCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CCA 72 bp ACTAACAGTTGTCTTCCACTGGTGCAGCCCTGCCATTaGCGTCTCTCTCAAGGGAAAGAGCTTGGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: TNSCLPLVQPCH*RLSQGKELGVD
Trigger: GTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000559819.5
CDS CAA 72 bp CACTTAGGCATGATTACCACTGGTGCAGCCCTGCCATaGGCGTCTCTCTCAAGGGAAAGAGCTTGGGGTAGA +
Preference number: 6 (lower is better)
Translates to: HLGMITTGAALP*ASLSRERAWGR
Trigger: TCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGTAATCATGCCTAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS CAA 90 bp CCTCACAGCCCGTGTCAAGACAATGATGAGACAAGGCCTCTGCCATaGAGAAGCATATCACACACAACCGACGAGGTGCAAGAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: PHSPCQDNDETRPLP*RSISHTTDEVQEEL
Trigger: GAGCTCCTCTTGCACCTCGTCGGTTGTGTGTGATATGCTTCTCAATGGCAGAGGCCTTGTCTCATCATTGTCTTGACACGGGCTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS TCA 72 bp CTTTGGAGCTTGCTGGCATCGTTCTATGTACCATGGTaGTTGCAGGCACTTTATTCGCCACCCACTGCACCC +
Preference number: 6 (lower is better)
Translates to: LWSLLASFYVPW*LQALYSPPTAP
Trigger: GGGTGCAGTGGGTGGCGAATAAAGTGCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS GCA 72 bp CACAAAACTAACAGTTGTCTTCCACTGGTGCAGCCCTaGCATTGGCGTCTCTCTCAAGGGAAAGAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: HKTNSCLPLVQP*HWRLSQGKELG
Trigger: CCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301981.8
ENST00000559819.5
CDS CCA 72 bp GGTGTGGGAAAAAGTGCCTTCAGCTTTGGAGCTTGCTaGCATCGTTCTATGTACCATGGTGATTGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: GVGKSAFSFGAC*HRSMYHGDCRH
Trigger: GTGCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CAA 90 bp GTGTGGTCTCTGAAGGTTTTGGTGTGGGAAAAAGTGCCTTCAGCTTaGGAGCTTGCTGGCATCGTTCTATGTACCATGGTGATTGCAGGC +
Preference number: 6 (lower is better)
Translates to: VWSLKVLVWEKVPSA*ELAGIVLCTMVIAG
Trigger: GCCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAAACCTTCAGAGACCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CAA 90 bp TGTGGCAGAGATGCAGATCGCATTTCAGTGTGGTCTCTGAAGGTTTaGGTGTGGGAAAAAGTGCCTTCAGCTTTGGAGCTTGCTGGCATC +
Preference number: 6 (lower is better)
Translates to: CGRDADRISVWSLKV*VWEKVPSALELAGI
Trigger: GATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAAACCTTCAGAGACCACACTGAAATGCGATCTGCATCTCTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS TCA 72 bp GAGTGCAGGTATAGTTCCACAAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAGGATGTCAGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: ECRYSSTRFGSF*ARFSGKDVREF
Trigger: GAACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301981.8
ENST00000447360.6
ENST00000558500.5
ENST00000558861.1
ENST00000559399.5
CDS TCA 72 bp CCTGATGAAAAGGAAAGCAGCTTCACCTCGGAAACTTaGATGGGAGCACCACAGCTGCAGAAAGACACACAT +
Preference number: 6 (lower is better)
Translates to: PDEKESSFTSET*MGAPQLQKDTH
Trigger: ATGTGTGTCTTTCTGCAGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560483.1
CDS GCA 72 bp TTTGGTGTGGGAAAAAGTGCCTTCAGCTTTGGAGCTTaGTGGCATCGTTCTATGTACCATGGTGATTGCAGG +
Preference number: 6 (lower is better)
Translates to: FGVGKSAFSFGA*WHRSMYHGDCR
Trigger: CCTGCAATCACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CCA 72 bp CTTGACTGCTATGGCATCACGGTGATTCCAAGTTTGTaGGGTGAGATGGCTTCTTTTGACTGTGCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: LDCYGITVIPSL*GEMASFDCAEE
Trigger: CTCTTCAGCACAGTCAAAAGAAGCCATCTCACCCCACAAACTTGGAATCACCGTGATGCCATAGCAGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561431.1
CDS CAA 72 bp CTGAAGGTTTTGGTGTGGGAAAAAGTGCCTTCAGCTTaGGAGCTTGCTGGCATCGTTCTATGTACCATGGTG +
Preference number: 6 (lower is better)
Translates to: LKVLVWEKVPSA*ELAGIVLCTMV
Trigger: CACCATGGTACATAGAACGATGCCAGCAAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAAACCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CAA 72 bp GCACTTGACTGCTATGGCATCACGGTGATTCCAAGTTaGTGGGGTGAGATGGCTTCTTTTGACTGTGCTGAA +
Preference number: 6 (lower is better)
Translates to: ALDCYGITVIPS*WGEMASFDCAE
Trigger: TTCAGCACAGTCAAAAGAAGCCATCTCACCCCACAAACTTGGAATCACCGTGATGCCATAGCAGTCAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561431.1
CDS TCA 72 bp TTCAAGTTCCACAGTTCCACAAGGTTTGGAAGCTTCTaGGCAAGGTTTTCTGGCAAGGATGTCAGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: FKFHSSTRFGSF*ARFSGKDVREF
Trigger: GAACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTGGAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS CAA 72 bp GATGCAGATCGCATTTCAGTGTGGTCTCTGAAGGTTTaGGTGTGGGAAAAAGTGCCTTCAGCTTTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: DADRISVWSLKV*VWEKVPSALEL
Trigger: AAGCTCCAAAGCTGAAGGCACTTTTTCCCACACCAAAACCTTCAGAGACCACACTGAAATGCGATCTGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS CAA 90 bp TTTGAGTGCAGGTATCTCAATTCAAGTTCCACAGTTCCACAAGGTTaGGAAGCTTCTGAGCAAGGTTTTCTGGCAAGGATGTCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: FECRYLNSSSTVPQG*EASEQGFLARMSGS
Trigger: ACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTGGAACTTGAATTGAGATACCTGCACTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS CAA 90 bp AACCGACGAGGTGCAAGAGGAGCTCAGAGAAGGTTATGTGAAGGCTaGGAGAAACTCTTCCAAAATCACAAAAGAGTCAGCAGCATCAAT +
Preference number: 6 (lower is better)
Translates to: NRRGARGAQRRLCEG*EKLFQNHKRVSSIN
Trigger: ATTGATGCTGCTGACTCTTTTGTGATTTTGGAAGAGTTTCTCCAAGCCTTCACATAACCTTCTCTGAGCTCCTCTTGCACCTCGTCGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS TCA 72 bp ATTGCAGGCACTTTATTCGCCACCCACTGCACCCGATaGCTTTATTGTACAGATAAGATGGCAAGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: IAGTLFATHCTR*LYCTDKMASLS
Trigger: TGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGGTGGCGAATAAAGTGCCTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558911.1
CDS TCA 72 bp TTTGGTTCACATCATGATCCAGTAAGTCTGAAGGGGTaGCTGCTTGTAGGGCTCAAACAGCACCAGCATATT +
Preference number: 6 (lower is better)
Translates to: FGSHHDPVSLKG*LLVGLKQHQHI
Trigger: AATATGCTGGTGCTGTTTGAGCCCTACAAGCAGTCACCCCTTCAGACTTACTGGATCATGATGTGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558248.5
CDS CAA 72 bp GAGACCCAATGGCTTCCGGAACCACAACTATGTTATTaGAGTGCAGGTATAGTTCCACAAGGTTTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: ETQWLPEPQLCY*SAGIVPQGLEA
Trigger: AGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301981.8
ENST00000447360.6
ENST00000558500.5
ENST00000558861.1
ENST00000559399.5
ENST00000561276.5
CDS CAA 72 bp GGTGCAAGAGGAGCTCAGAGAAGGTTATGTGAAGGCTaGGAGAAACTCTTCCAAAATCACAAAAGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: GARGAQRRLCEG*EKLFQNHKRVS
Trigger: GCTGACTCTTTTGTGATTTTGGAAGAGTTTCTCCAAGCCTTCACATAACCTTCTCTGAGCTCCTCTTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558890.5
CDS TCA 72 bp AGACCCAATGGCTTCCGGAACCACAACTATGTTATTTaGGTGCAGGTATCTCAATTCAAGTTCCACAGTTCC +
Preference number: 6 (lower is better)
Translates to: RPNGFRNHNYVI*VQVSQFKFHSS
Trigger: GGAACTGTGGAACTTGAATTGAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS CCA 72 bp GGTATCTCAATTCAAGTTCCACAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTTTTCTGGCAAGGATGT +
Preference number: 6 (lower is better)
Translates to: GISIQVPQFHKV*KLLSKVFWQGC
Trigger: ACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTGGAACTTGAATTGAGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS CAA 72 bp GAGACCCAATGGCTTCCGGAACCACAACTATGTTATTaGAGTGCAGGTATCTCAATTCAAGTTCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: ETQWLPEPQLCY*SAGISIQVPQF
Trigger: GAACTGTGGAACTTGAATTGAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS TCA 72 bp TCAAAATGTGAAATCGGCCTTACCCACTGCACCCGATaGCTTTATTGTACAGATAAGATGGCAAGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: SKCEIGLTHCTR*LYCTDKMASLS
Trigger: TGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGGTAAGGCCGATTTCACATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558248.5
CDS GCA 72 bp CCAATGGCTTCCGGAACCACAACTATGTTATTTGAGTaGAGGTATCTCAATTCAAGTTCCACAGTTCCACAA +
Preference number: 6 (lower is better)
Translates to: PMASGTTTMLFE*RYLNSSSTVPQ
Trigger: TTGTGGAACTGTGGAACTTGAATTGAGATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561253.5
CDS GCA 72 bp TGCTTTCCTACACAACTTCTCCGGCAACCTCATAACTaGACGAACTTGGATAACAAATTCATAGCCAATGAG +
Preference number: 6 (lower is better)
Translates to: CFPTQLLRQPHN*TNLDNKFIANE
Trigger: CTCATTGGCTATGAATTTGTTATCCAAGTTCGTGCAGTTATGAGGTTGCCGGAGAAGTTGTGTAGGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560213.1
CDS CCA 72 bp CACAAAACTAACAGTTGTCTTCAGTTCCACAAGGTTTaGAAGCTTCTGAGCAAGGTTTTCTGGCAAGGATGT +
Preference number: 6 (lower is better)
Translates to: HKTNSCLQFHKV*KLLSKVFWQGC
Trigger: ACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGAAGACAACTGTTAGTTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331450.9