Pregenerated sensors for LRRC26 (Homo sapiens)
Ensembl gene IDs: ENSG00000184709Ensembl transcript IDs: ENST00000371542.3
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGAGGCAGTCAGGGGGCTaGGCGTCAGGCGTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KGGQRHGGSFERSRRPRPRQSGG*ASGVPA Trigger: GGCCGGGACGCCTGACGCTCAGCCCCCTGACTGCCT...CGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGGGCGGGCAGCGAGAGTaGCGAGCAGCTGGCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KGGQRHGGSFERSRRPRPGGQRE*RAAGQA Trigger: GGCCTGGCCAGCTGCTCGGCACTCTCGCTGCCCGCC...CGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGGGCGAGGCACAGCCGTaGGGGTCGGGATCGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGGQRHGGSFERSRRPRPGEAQP*GSGSGF Trigger: GAACCCCGATCCCGACCCCCACGGCTGTGCCTCGCC...CGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCCGCAGCCCCAAGGGTTaGCGCGCAGGTGCAGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: KGRAKAWGKLRALQAAAARSPKG*RAGAAR Trigger: ACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCG...GGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR TCA 90 bp | GTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGGTCCTGCAGGCTGAGTaGGCGCAGCAGCGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: VKGGQRHGGSFERSRRPRVLQAE*AQQRER Trigger: GCGCTCCCGCTGCTGCGCTCACTCAGCCTGCAGGAC...CCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | TGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGCGGTGGGAGGCCCGCTaGCTGTGCGTCCCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: CKGRAKAWGKLRALQAAARWEAR*LCVPGA Trigger: GGCTCCAGGGACGCACAGGCAGCGGGCCTCCCACCG...CGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGCGCACATGCACCGAGTaGAGCCCGTTCTCGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGGQRHGGSFERSRRPRPRTCTE*SPFSRR Trigger: CCTGCGCGAGAACGGGCTGCACTCGGTGCATGTGCG...CGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGGCGCGCCAGCCGGTTaGCGGCCAATGAGAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: KGRAKAWGKLRALQAAAAGAPAG*RPMRGC Trigger: GCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCC...GGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | GTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCAGCCCCGGCGCGAGTaGCGCCAGCTCGTTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VKGGQRHGGSFERSRRPRQPRRE*RQLVVL Trigger: CAGGACAACGAGCTGGCGGCACTCGCGCCGGGGCTG...CCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | GTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCTGCCTGTGCGTCCCTaGAGCCCGTCGTCCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: VKGGQRHGGSFERSRRPRLPVRP*SPSSAE Trigger: CTCCGCGGACGACGGGCTCCAGGGACGCACAGGCAG...CCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGCCGCGGAGCCCGTTCCTaGGGCGCCTGCACAAATATT | + |
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Preference number: 4 (lower is better) Translates to: REGKGMGEASSAPGGRGRRGARS*GACTNI Trigger: AATATTTGTGCAGGCGCCGCAGGAACGGGCTCCGCG...GCGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGCCAGAAGGCTCGCACATaGACCGAGTGCAGCCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: REGKGMGEASSAPGGRGRQKART*TECSPF Trigger: GAACGGGCTGCACTCGGTGCATGTGCGAGCCTTCTG...GCGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | TGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGTGGCCGACACCTaGGCCCAGACAGGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: CKGRAKAWGKLRALQAAAAVADT*AQTGQG Trigger: GCCTTGGCCTGTCTGGGCCCAGGTGTCGGCCACGGC...CGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | CAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCCCGAGGGCGAGGCCGTaGCCGACACCTGGGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QCKGRAKAWGKLRALQAAPRARP*PTPGPR Trigger: TCTGGGCCCAGGTGTCGGCCACGGCCTCGCCCTCGG...GGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGGGGAGGGCAAAGGCATaGGGGAAGCTTCGAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KGGQRHGGSFERSRRPRPGRAKA*GKLRAL Trigger: GAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCC...CGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR TCA 90 bp | GCAGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGGCGCACGGCAGGCGGTaGGCCCAGAGCCCAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: ADSVKGGQRHGGSFERSRAHGRR*AQSPAP Trigger: TGGCGCTGGGCTCTGGGCTCACCGCCTGCCGTGCGC...CCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | CAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGGGTTGCCGCGCAGGTaGAGCGCGTCTAGAGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: QCKGRAKAWGKLRALQAAGLPRR*SASRAG Trigger: GCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCC...GGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | AGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGGCACGGACGCGGTTGTaGTCCAGCAGCAGCGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: SVKGGQRHGGSFERSRRPARTRL*SSSSAR Trigger: GCGCGCGCTGCTGCTGGACCACAACCGCGTCCGTGC...CGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | GACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGTCCCGCGAAGGCACCTaGCGGCAGCGCACGGACGCG | + |
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Preference number: 4 (lower is better) Translates to: DSVKGGQRHGGSFERSRRSREGT*RQRTDA Trigger: CGCGTCCGTGCGCTGCCGCCAGGTGCCTTCGCGGGA...CCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | AAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCCGGCGCGAAAGTCCCTaGTGCCAGTGCTTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KGRAKAWGKLRALQAAAARRESP*CQCFQL Trigger: CAGCTGGAAGCACTGGCACCAGGGACTTTCGCGCCG...GGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR TCA 90 bp | GACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGGTTGCCGGCCAATaGGAGGTTGCGCAGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: DSVKGGQRHGGSFERSRRPVAGQ*EVAQRA Trigger: CGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGG...CCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR TCA 90 bp | GACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGGGCAGGAAGCCAGGCTaGCGAGGAAGGAGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: DSVKGGQRHGGSFERSRRGRKPG*RGRRPA Trigger: GGCCGGCCTCCTTCCTCGTCAGCCTGGCTTCCTGCC...CCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | AGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGCAGGGCGAGCGGCTaGGCGCAATGGCTAAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SVKGGQRHGGSFERSRRPRRASG*AQWLKA Trigger: CGCCTTTAGCCATTGCGCGCAGCCGCTCGCCCTGCG...CGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR TCA 90 bp | CAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCCGTTGTCCTGCAGGCTaGGTGAGCGCAGCAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: QCKGRAKAWGKLRALQAARCPAG*VSAAAG Trigger: TCCCGCTGCTGCGCTCACTCAGCCTGCAGGACAACG...GGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | GCAGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCAATGAGAGGTTaGGCAGCGCGCGCAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: ADSVKGGQRHGGSFERSRRPMRG*AARAAA Trigger: CGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCG...CCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | AGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGAGAGTGCCGAGCAGCTaGCCAGGCCTCCCGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: RQCKGRAKAWGKLRALQARVPSS*PGLPAR Trigger: GCGTGCCGGGAGGCCTGGCCAGCTGCTCGGCACTCT...CGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | TGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCAGTGCTTCCAGCTaGTTGGCGCTCAGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CKGRAKAWGKLRALQAAAASASS*LALRSS Trigger: GCTGGACCTGAGCGCCAACCAGCTGGAAGCACTGGC...CGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CCA 90 bp | TGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGAGCGGCTGCGCGCAATaGCTAAAGGCGGCGTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: CKGRAKAWGKLRALQAAASGCAQ*LKAASE Trigger: TTCCGACGCCGCCTTTAGCCATTGCGCGCAGCCGCT...CGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | GCAGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGGCCAGCTCGTTGTCCTaGAGGCTGAGTGAGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ADSVKGGQRHGGSFERSRASSLS*RLSERS Trigger: GCTGCGCTCACTCAGCCTGCAGGACAACGAGCTGGC...CCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | GCAGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGAGTCCCTGGTGCCAGTaGTTCCAGCTGGTTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: ADSVKGGQRHGGSFERSRSPWCQ*FQLVGA Trigger: AGCGCCAACCAGCTGGAAGCACTGGCACCAGGGACT...CCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR GCA 90 bp | GACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCGCGAAAGTCCCTGGTaGCAGTGCTTCCAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: DSVKGGQRHGGSFERSRRRESPW*QCFQLV Trigger: AACCAGCTGGAAGCACTGGCACCAGGGACTTTCGCG...CCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | GGCCACACGCAGAGCACCGTCTCGGCCTCTGACGCGGGCAGCGGGTaGCGGCGCAGCCAGGCGCAGAGCGGGCGCAGCGCGCACCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: GHTQSTVSASDAGSG*RRSQAQSGRSAHPQ Trigger: CTGCGGGTGCGCGCTGCGCCCGCTCTGCGCCTGGCTGCGCCGGCACCCGCTGCCCGCGTCAGAGGCCGAGACGGTGCTCTGCGTGTGGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 90 bp | CCGCCCCCGGCACCCGCGGTGGGAGGCCCGCTGCCTGTGCGTCCCTaGAGCCCGTCGTCCGCGGAGCCCGTTCCTGCGGCGCCTGCACAA | + |
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Preference number: 5 (lower is better) Translates to: PPPAPAVGGPLPVRP*SPSSAEPVPAAPAQ Trigger: TTGTGCAGGCGCCGCAGGAACGGGCTCCGCGGACGACGGGCTCCAGGGACGCACAGGCAGCGGGCCTCCCACCGCGGGTGCCGGGGGCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | GCGCAGGCGCAGGCTCAGGCCCGGGGGCACGGCGGGCAGCGAGAGTaGCGAGCAGCTGGCCAGGCCTCCCGGCACGCACGTGCACACCTC | + |
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Preference number: 5 (lower is better) Translates to: AQAQAQARGHGGQRE*RAAGQASRHARAHL Trigger: GAGGTGTGCACGTGCGTGCCGGGAGGCCTGGCCAGCTGCTCGGCACTCTCGCTGCCCGCCGTGCCCCCGGGCCTGAGCCTGCGCCTGCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | GCGGGAGCGCGCCTAGCGCCGCGGGCTCCAGGCGCGCCAGCCGGTTaGCGGCCAATGAGAGGTTGCGCAGCGCGCGCAGCGGCGCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: AGARLAPRAPGAPAG*RPMRGCAARAAARK Trigger: CTTTCGCGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGAGCCCGCGGCGCTAGGCGCGCTCCCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | GCCAGGCGCAGAGCGGGCGCAGCGCGCACCCGCAGCCCCAAGGGTTaGCGCGCAGGTGCAGCGCGTCTAGAGCGGGCAGGCGGCCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: ARRRAGAARTRSPKG*RAGAARLERAGGPA Trigger: TGCTGGGCCGCCTGCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGGGTGCGCGCTGCGCCCGCTCTGCGCCTGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 90 bp | GGCTCAGGCCCGGGGGCACGGCGGGCAGCGAGAGTGCCGAGCAGCTaGCCAGGCCTCCCGGCACGCACGTGCACACCTCGGGGCAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: GSGPGARRAARVPSS*PGLPARTCTPRGSP Trigger: CGGACTGCCCCGAGGTGTGCACGTGCGTGCCGGGAGGCCTGGCCAGCTGCTCGGCACTCTCGCTGCCCGCCGTGCCCCCGGGCCTGAGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | AGGCGGCCCAGCAGCCCCGGCGCGAGTGCCGCCAGCTCGTTGTCCTaGAGGCTGAGTGAGCGCAGCAGCGGGAGCGCGCCTAGCGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: RRPSSPGASAASSLS*RLSERSSGSAPSAA Trigger: CGCGGCGCTAGGCGCGCTCCCGCTGCTGCGCTCACTCAGCCTGCAGGACAACGAGCTGGCGGCACTCGCGCCGGGGCTGCTGGGCCGCCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS TCA 90 bp | CCAGCAGCCCCGGCGCGAGTGCCGCCAGCTCGTTGTCCTGCAGGCTaGGTGAGCGCAGCAGCGGGAGCGCGCCTAGCGCCGCGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PAAPARVPPARCPAG*VSAAAGARLAPRAP Trigger: TGGAGCCCGCGGCGCTAGGCGCGCTCCCGCTGCTGCGCTCACTCAGCCTGCAGGACAACGAGCTGGCGGCACTCGCGCCGGGGCTGCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 90 bp | TCCGGGGCGCCCAGGGACCCCGAGGGCGAGGCCGTGGCCGACACCTaGGCCCAGACAGGCCAAGGCGACAGCAGCAGCAACAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SGAPRDPEGEAVADT*AQTGQGDSSSNSSS Trigger: GCTGCTGCTGTTGCTGCTGCTGTCGCCTTGGCCTGTCTGGGCCCAGGTGTCGGCCACGGCCTCGCCCTCGGGGTCCCTGGGCGCCCCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | CCGCGGGCTCCAGGCGCGCCAGCCGGTTGCCGGCCAATGAGAGGTTaGGCAGCGCGCGCAGCGGCGCGAAAGTCCCTGGTGCCAGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: PRAPGAPAGCRPMRG*AARAAARKSLVPVL Trigger: AAGCACTGGCACCAGGGACTTTCGCGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGAGCCCGCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | AAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCGCCGGCCAATGAGAGGTaGCGCAGCGCGCGCAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: KGGQRHGGSFERSRRPRPPANER*RSARSG Trigger: GCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGG...CGGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | AAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGCCCCGCAGCCCCAAGGGTaGCCGCGCAGGTGCAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: KGRAKAWGKLRALQAAAAPQPQG*PRRCSA Trigger: CGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGG...GGCCGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | AGCTGCAGCGCGCCCAGGCCCCAGAAGGCTCGCACATGCACCGAGTaGAGCCCGTTCTCGCGCAGGTCCAGGCGCTGTAGCGCGCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SCSAPRPQKARTCTE*SPFSRRSRRCSAPA Trigger: AGCGGGCGCGCTACAGCGCCTGGACCTGCGCGAGAACGGGCTGCACTCGGTGCATGTGCGAGCCTTCTGGGGCCTGGGCGCGCTGCAGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 90 bp | AGGTCCAGCAGCTGCAGCGCGCCCAGGCCCCAGAAGGCTCGCACATaGACCGAGTGCAGCCCGTTCTCGCGCAGGTCCAGGCGCTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: RSSSCSAPRPQKART*TECSPFSRRSRRCS Trigger: GCTACAGCGCCTGGACCTGCGCGAGAACGGGCTGCACTCGGTGCATGTGCGAGCCTTCTGGGGCCTGGGCGCGCTGCAGCTGCTGGACCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | TGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGAGCGCACGGACGCGGTaGTGGTCCAGCAGCAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: CKGRAKAWGKLRALQAAASARTR*WSSSSA Trigger: CGCGCTGCTGCTGGACCACAACCGCGTCCGTGCGCT...CGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | GCAGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGAGGCGCGCCAGCCGGTaGCCGGCCAATGAGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ADSVKGGQRHGGSFERSRRRASR*PANERL Trigger: CAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCT...CCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | TGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCGCGGGTCTGTGTCGCTTGTaGACGCCGGCAGACAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: CKGRAKAWGKLRALQAAAGLCRL*TPADSV Trigger: TACACTGTCTGCCGGCGTCAACAAGCGACACAGACC...CGCGGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | GCAGACAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGAGTGCCGCCAGCTCGTaGTCCTGCAGGCTGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ADSVKGGQRHGGSFERSRSAASS*SCRLSE Trigger: CTCACTCAGCCTGCAGGACAACGAGCTGGCGGCACT...CCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS-3UTR CAA 90 bp | CAGTGTAAAGGGAGGGCAAAGGCATGGGGGAAGCTTCGAGCGCTCCAGGCGGCCTTCGGTCTGTGTCGCTaGTTGACGCCGGCAGACAGT | + |
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Preference number: 5 (lower is better) Translates to: QCKGRAKAWGKLRALQAAFGLCR*LTPADS Trigger: ACTGTCTGCCGGCGTCAACAAGCGACACAGACCGAA...GGCCGCCTGGAGCGCTCGAAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 72 bp | GCACCCGCGGTGGGAGGCCCGCTGCCTGTGCGTCCCTaGAGCCCGTCGTCCGCGGAGCCCGTTCCTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: APAVGGPLPVRP*SPSSAEPVPAA Trigger: CGCCGCAGGAACGGGCTCCGCGGACGACGGGCTCCAGGGACGCACAGGCAGCGGGCCTCCCACCGCGGGTGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 72 bp | GGCACAGCCGTGGGGGTCGGGATCGGGGTTCGGGTCTaGCGGTCTCGGCGGGCGGAGGGCGGCGGTGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GTAVGVGIGVRV*RSRRAEGGGAE Trigger: CTCCGCACCGCCGCCCTCCGCCCGCCGAGACCGCCAGACCCGAACCCCGATCCCGACCCCCACGGCTGTGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CAA 90 bp | AGCCAGGCGCAGAGCGGGCGCAGCGCGCACCCGCAGCCCCAAGGGTaGCCGCGCAGGTGCAGCGCGTCTAGAGCGGGCAGGCGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SQAQSGRSAHPQPQG*PRRCSASRAGRRPS Trigger: GCTGGGCCGCCTGCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGGGTGCGCGCTGCGCCCGCTCTGCGCCTGGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 72 bp | CAGGCTCAGGCCCGGGGGCACGGCGGGCAGCGAGAGTaGCGAGCAGCTGGCCAGGCCTCCCGGCACGCACGT | + |
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Preference number: 6 (lower is better) Translates to: QAQARGHGGQRE*RAAGQASRHAR Trigger: ACGTGCGTGCCGGGAGGCCTGGCCAGCTGCTCGGCACTCTCGCTGCCCGCCGTGCCCCCGGGCCTGAGCCTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 72 bp | CGCCTAGCGCCGCGGGCTCCAGGCGCGCCAGCCGGTTaGCGGCCAATGAGAGGTTGCGCAGCGCGCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RLAPRAPGAPAG*RPMRGCAARAA Trigger: CGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGAGCCCGCGGCGCTAGGCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 72 bp | CCGGGGGCACGGCGGGCAGCGAGAGTGCCGAGCAGCTaGCCAGGCCTCCCGGCACGCACGTGCACACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PGARRAARVPSS*PGLPARTCTPR Trigger: CCGAGGTGTGCACGTGCGTGCCGGGAGGCCTGGCCAGCTGCTCGGCACTCTCGCTGCCCGCCGTGCCCCCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CAA 90 bp | AGCGGGAGCGCGCCTAGCGCCGCGGGCTCCAGGCGCGCCAGCCGGTaGCCGGCCAATGAGAGGTTGCGCAGCGCGCGCAGCGGCGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SGSAPSAAGSRRASR*PANERLRSARSGAK Trigger: TTTCGCGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGAGCCCGCGGCGCTAGGCGCGCTCCCGCT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 72 bp | AGCGCGCACCCGCAGCCCCAAGGGTTGCCGCGCAGGTaGAGCGCGTCTAGAGCGGGCAGGCGGCCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SAHPQPQGLPRR*SASRAGRRPSS Trigger: GCTGCTGGGCCGCCTGCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGGGTGCGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 72 bp | AGAGCGGGCGCAGCGCGCACCCGCAGCCCCAAGGGTTaGCGCGCAGGTGCAGCGCGTCTAGAGCGGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RAGAARTRSPKG*RAGAARLERAG Trigger: GCCTGCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGGGTGCGCGCTGCGCCCGCTCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 72 bp | AGTCCGGGGCGCCCAGGGACCCCGAGGGCGAGGCCGTaGCCGACACCTGGGCCCAGACAGGCCAAGGCGACA | + |
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Preference number: 6 (lower is better) Translates to: SPGRPGTPRARP*PTPGPRQAKAT Trigger: TGTCGCCTTGGCCTGTCTGGGCCCAGGTGTCGGCCACGGCCTCGCCCTCGGGGTCCCTGGGCGCCCCGGACT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CAA 72 bp | CAGAGCGGGCGCAGCGCGCACCCGCAGCCCCAAGGGTaGCCGCGCAGGTGCAGCGCGTCTAGAGCGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QSGRSAHPQPQG*PRRCSASRAGR Trigger: CCTGCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGGGTGCGCGCTGCGCCCGCTCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS TCA 72 bp | CCGGCGCGAGTGCCGCCAGCTCGTTGTCCTGCAGGCTaGGTGAGCGCAGCAGCGGGAGCGCGCCTAGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: PARVPPARCPAG*VSAAAGARLAP Trigger: CGGCGCTAGGCGCGCTCCCGCTGCTGCGCTCACTCAGCCTGCAGGACAACGAGCTGGCGGCACTCGCGCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CAA 72 bp | CGGCCCAGCAGCCCCGGCGCGAGTGCCGCCAGCTCGTaGTCCTGCAGGCTGAGTGAGCGCAGCAGCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RPSSPGASAASS*SCRLSERSSGS Trigger: GCTCCCGCTGCTGCGCTCACTCAGCCTGCAGGACAACGAGCTGGCGGCACTCGCGCCGGGGCTGCTGGGCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CAA 90 bp | GCCGCGGGCTCCAGGCGCGCCAGCCGGTTGCCGGCCAATGAGAGGTaGCGCAGCGCGCGCAGCGGCGCGAAAGTCCCTGGTGCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: AAGSRRASRLPANER*RSARSGAKVPGASA Trigger: AGCACTGGCACCAGGGACTTTCGCGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGAGCCCGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 72 bp | CCAGGCGCGCCAGCCGGTTGCCGGCCAATGAGAGGTTaGGCAGCGCGCGCAGCGGCGCGAAAGTCCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: PGAPAGCRPMRG*AARAAARKSLV Trigger: CACCAGGGACTTTCGCGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CAA 72 bp | TCCAGGCGCGCCAGCCGGTTGCCGGCCAATGAGAGGTaGCGCAGCGCGCGCAGCGGCGCGAAAGTCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRRASRLPANER*RSARSGAKVPG Trigger: ACCAGGGACTTTCGCGCCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS GCA 72 bp | AGCTGCAGCGCGCCCAGGCCCCAGAAGGCTCGCACATaGACCGAGTGCAGCCCGTTCTCGCGCAGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCSAPRPQKART*TECSPFSRRSR Trigger: CCTGGACCTGCGCGAGAACGGGCTGCACTCGGTGCATGTGCGAGCCTTCTGGGGCCTGGGCGCGCTGCAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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| CDS CCA 72 bp | ACGGCCAGGTCCCGCAGGGCGAGCGGCTGCGCGCAATaGCTAAAGGCGGCGTCGGAAAAGGCAGTCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TARSRRASGCAQ*LKAASEKAVRG Trigger: CCCCCTGACTGCCTTTTCCGACGCCGCCTTTAGCCATTGCGCGCAGCCGCTCGCCCTGCGGGACCTGGCCGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371542.3 |
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