Pregenerated sensors for LRRC18 (Homo sapiens)
Ensembl gene IDs: ENSG00000165383Ensembl transcript IDs: ENST00000374160.7
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAAAGAAGTTTATTTGAGTCATGGTTCTTACAAGCTGTACAGGTaGCGGCACCTCCTTCTGGTGAGGGCTTTGGGGTATAGGTGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: RKEVYLSHGSYKLYR*RHLLLVRALGYRCF Trigger: GAAGCACCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAGCTTGTAAGAACCATGACTCAAATAAACTTCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR CAA 90 bp | ATTTTCACACACAGGTGGGCTAAAGCTAAGGGAGGTGAAGTGAATTaGAGAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IFTHRWAKAKGGEVN*RSKSVAWPAPASLV Trigger: AACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTTCTCAAATTCACTTCACCTCCCTTAGCTTTAGCCCACCTGTGTGTGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR-3UTR TCA 90 bp | TACAAGCTGTACAGGTGCCGGCACCTCCTTCTGGTGAGGGCTTTGGGGTATAGGGATCAAATCTCAACATaGGGTTTGGAGGAGACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: YKLYRCRHLLLVRALGYRDQIST*GLEETN Trigger: ATTTGTCTCCTCCAAACCTCATGTTGAGATTTGATC...CCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAGCTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGTGGAAGGTGAAGGGGAGCAGGCATCACATAGTGAGAGGAAGAGAGAGAAAGCAAGTCGGTGGCTaGGCCAGCTCCGGCGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SWWKVKGSRHHIVRGRERKQVGG*ASSGEP Trigger: AGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTT...TCTCTCTCTTCCTCTCACTATGTGATGCCTGCTCCCCTTCACCTTCCACCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR CCA 72 bp | GAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTaGTTTCCAGAACATCTCACTTGCCACTCTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EASRWLGQLRRA*FPEHLTCHSVF Trigger: GAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR GCA 72 bp | GTTTATTTGAGTCATGGTTCTTACAAGCTGTACAGGTaGCGGCACCTCCTTCTGGTGAGGGCTTTGGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VYLSHGSYKLYR*RHLLLVRALGY Trigger: ATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAGCTTGTAAGAACCATGACTCAAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTAGCAAGTCGGTGGCTTaGCCAGCTCCGGCGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASSGEPGFQNISLATLSSKSVA*PAPASL Trigger: CAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCT...AGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTGCTTCCACTCATGGTaGAAGGTGAAGGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQLRRAWFPEHLTCHCFHSW*KVKGSR Trigger: CCTGCTCCCCTTCACCTTCCACCATGAGTGGAAGCA...GTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCAGCGCGGATGTTCTTaGGTTGCTTCAGCTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVAWPAPASLVSRTSHLQRGCS*VASAPR Trigger: CCGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTG...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR GCA 90 bp | TCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACCCACGGGCAGCCCGTTaGTGGTCAGCCGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGEPGFQNISLATLSSPNPRAAR*WSAGCC Trigger: GCAACAACCGGCTGACCAGCAACGGGCTGCCCGTGG...GTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TCATGGTGGAAGGTGAAGGGGAGCAGGCATCACATAGTGAGAGGAAGAGAGAGAGGGCCCCCAGTGTGGTaGGCACGCTGTCCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWWKVKGSRHHIVRGRERGPPVW*ARCPGG Trigger: ACCACCTGGACAGCGTGCCCACCACACTGGGGGCCC...TCTCTCTCTTCCTCTCACTATGTGATGCCTGCTCCCCTTCACCTTCCACCATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | TCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACAGGGACCCACCCCCATaGCCTTCCATTAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGEPGFQNISLATLSSPNRDPPP*PSIRPH Trigger: GTGGGGCCTAATGGAAGGTCATGGGGGTGGGTCCCT...GTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGTCAGCTTGGGGAGCTTaGAGATGCTCACGGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KSVAWPAPASLVSRTSHLSAWGA*RCSRGC Trigger: ACATCCCCGTGAGCATCTCCAAGCTCCCCAAGCTGA...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR CAA 72 bp | CTGTACAGGTGCCGGCACCTCCTTCTGGTGAGGGCTTaGGGGTATAGGTGCTTCCACTCATGGTGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYRCRHLLLVRA*GYRCFHSWWKV Trigger: CACCTTCCACCATGAGTGGAAGCACCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | CGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACGGTTCCGCTTTATGTTaGGCTTTTTCAGCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQLRRAWFPEHLTCHGSALC*AFSAWG Trigger: TCCCCAAGCTGAAAAAGCTCAACATAAAGCGGAACC...GTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| 3UTR CAA 72 bp | CACAGGTGGGCTAAAGCTAAGGGAGGTGAAGTGAATTaGAGAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRWAKAKGGEVN*RSKSVAWPAPA Trigger: CGCCGGAGCTGGCCAAGCCACCGACTTGCTTCTCAAATTCACTTCACCTCCCTTAGCTTTAGCCCACCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR GCA 90 bp | TACAAGCTGTACAGGTGCCGGCACCTCCTTCTGGTGAGGGCTTTGGGGTATAGGTGGGGAGCTTGGAGATaGTCACGGGGATGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKLYRCRHLLLVRALGYRWGAWR*SRGCCS Trigger: TGAACAACATCCCCGTGAGCATCTCCAAGCTCCCCA...CCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAGCTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGAACTCACTCATTACCAAAAGGATGGCACCAGGCCATTCATGAGGGATCAGGGCCCCCAGTGTaGTGGGCACGCTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVRTHSLPKGWHQAIHEGSGPPV*WARCPG Trigger: ACCTGGACAGCGTGCCCACCACACTGGGGGCCCTGA...TCCCTCATGAATGGCCTGGTGCCATCCTTTTGGTAATGAGTGAGTTCTCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCGACTCACCTGGCTTTaGAAAGGGGTTCCGCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVAWPAPASLVSRTSHLRLTWL*KGVPLY Trigger: ATAAAGCGGAACCCCTTTCCAAAGCCAGGTGAGTCG...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGTATTTCCGACTCACCTaGCTTTGGAAAGGGGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSVAWPAPASLVSRTSHLYFRLT*LWKGVP Trigger: CGGAACCCCTTTCCAAAGCCAGGTGAGTCGGAAATA...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTTGTCCCGGGCGTTTTaGCATTTTCTCAGGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LASSGEPGFQNISLATLSLSRAF*HFLRQA Trigger: GGCTTGCCTGAGAAAATGCCAAAACGCCCGGGACAA...AGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACATTTTCACACACAGGTaGGCTAAAGCTAAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQLRRAWFPEHLTCHIFTHR*AKAKGG Trigger: ACCTCCCTTAGCTTTAGCCCACCTGTGTGTGAAAAT...GTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | GTGAATTTGAGAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCTCGTGGCCATGTTCTTaGTTCTATTCAGGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNLRSKSVAWPAPASLVSSWPCS*FYSGCP Trigger: GGGACAACCTGAATAGAATCAAGAACATGGCCACGA...GGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTTCTCAAATTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TACAAGCTGTACAGGTGCCGGCACCTCCTTCTGGTGAGGGCTTTGGGGTATAGGTGGTCATCTGGCCAATaGACTCAGGCAGCTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKLYRCRHLLLVRALGYRWSSGQ*TQAACL Trigger: TAGACAAGCTGCCTGAGTCCATTGGCCAGATGACCA...CCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAGCTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TCATGGTGGAAGGTGAAGGGGAGCAGGCATCACATAGTGAGAGGAAGAGAGAGAAGCAGGCTGGTCATCTaGCCAATGGACTCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWWKVKGSRHHIVRGRERSRLVI*PMDSGS Trigger: GCTGCCTGAGTCCATTGGCCAGATGACCAGCCTGCT...TCTCTCTCTTCCTCTCACTATGTGATGCCTGCTCCCCTTCACCTTCCACCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TCATGGTGGAAGGTGAAGGGGAGCAGGCATCACATAGTGAGAGGAAGAGAGAGAGGCACGCTGTCCAGGTaGTTCAAGCCTAGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SWWKVKGSRHHIVRGRERGTLSR*FKPRFT Trigger: TGTGAACCTAGGCTTGAACCACCTGGACAGCGTGCC...TCTCTCTCTTCCTCTCACTATGTGATGCCTGCTCCCCTTCACCTTCCACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGTGGGTGAGATCAGATTaGGAAAGATGGTCTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSVAWPAPASLVSRTSHLWVRSD*ERWSFS Trigger: CGAGAAAGACCATCTTTCCCAATCTGATCTCACCCA...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TACAAGCTGTACAGGTGCCGGCACCTCCTTCTGGTGAGGGCTTTGGGGTATAGGCCTTGGCCATGGAATTaGGTGAGATCAGATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKLYRCRHLLLVRALGYRPWPWN*VRSDWE Trigger: TTCCCAATCTGATCTCACCCAATTCCATGGCCAAGG...CCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGGCACCTGTACAGCTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TCATGGTGGAAGGTGAAGGGGAGCAGGCATCACATAGTGAGAGGAAGAGAGAGACAGCTCCGGCGAGCCTaGTTTCCAGAACATCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SWWKVKGSRHHIVRGRERQLRRA*FPEHLT Trigger: AGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTG...TCTCTCTCTTCCTCTCACTATGTGATGCCTGCTCCCCTTCACCTTCCACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | TCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACGGCCATGGAATTGGGTaGGATCAGATTGGGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGEPGFQNISLATLSSPNGHGIG*DQIGKD Trigger: ATCTTTCCCAATCTGATCTCACCCAATTCCATGGCC...GTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | GTGAATTTGAGAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCGATCAAATCTCAACATaGGGTTTGGAGGAGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VNLRSKSVAWPAPASLVSDQIST*GLEETN Trigger: ATTTGTCTCCTCCAAACCTCATGTTGAGATTTGATC...GGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTTCTCAAATTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACTCAGATTGGGAAAGATaGTCTTTCTCGGTGTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPGFQNISLATLSSPNSDWER*SFSVSS Trigger: CGACGACACCGAGAAAGACCATCTTTCCCAATCTGA...GTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | TCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACAGGAGTCCTTGGCCATaGAATTGGGTGAGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGEPGFQNISLATLSSPNRSPWP*NWVRSD Trigger: ATCTGATCTCACCCAATTCCATGGCCAAGGACTCCT...GTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR GCA 90 bp | ACACTGGGGATCAAATCTCAACATGAGGTTTGGAGGAGACAAATGCCCAAACCACGGATGTTCTTGAGTTaGTTCAGCTCCACGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGIKSQHEVWRRQMPKPRMFLS*FSSTGS Trigger: GCTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCG...TGGTTTGGGCATTTGTCTCCTCCAAACCTCATGTTGAGATTTGATCCCCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGAGAGAGAGAGGAGAGGGAGGTGCCAAGGTCTTTTTAACAATCAATTTAGGTGCTTCCACTCATaGTGGAAGGTGAAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEERERRGRCQGLFNNQFRCFHS*WKVKGS Trigger: GCTCCCCTTCACCTTCCACCATGAGTGGAAGCACCT...AAATTGATTGTTAAAAAGACCTTGGCACCTCCCTCTCCTCTCTCTCTCTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGAGAGAGAGAGGAGAGGGAGGTGCCAAGGTCTTTTTAACAATCAATTTGCTTGTCTATGTAGTTaGTGTGCAGGTCCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EEERERRGRCQGLFNNQFACLCS*CAGPAT Trigger: GGTGGCTGGACCTGCACAGCAACTACATAGACAAGC...AAATTGATTGTTAAAAAGACCTTGGCACCTCCCTCTCCTCTCTCTCTCTTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGAGAGAGAGAGGAGAGGGAGGTGCCAAGGTCTTTTTAACAATCAATTTAGCCACCGGAGGTTCTaGAACTTGGAGATGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEERERRGRCQGLFNNQFSHRRF*NLEMES Trigger: TGACTCCATCTCCAAGTTCCAGAACCTCCGGTGGCT...AAATTGATTGTTAAAAAGACCTTGGCACCTCCCTCTCCTCTCTCTCTCTTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | AGAACATCTCACTTGCCACTCTGTCTTCTCCTAACTGGGGGCTTCTCCTCTTCATCTCAACATGAGGTTTaGAGGAGACAAATGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTSHLPLCLLLTGGFSSSSQHEV*RRQMPK Trigger: TTTGGGCATTTGTCTCCTCCAAACCTCATGTTGAGA...TGAAGAGGAGAAGCCCCCAGTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR TCA 90 bp | ACACTGGGGATCAAATCTCAACATGAGGTTTGGAGGAGACAAATGCCCAAACCACAGGATCTAATACAGTaGGAACTCACTCATTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLGIKSQHEVWRRQMPKPQDLIQ*ELTHYQ Trigger: TTGGTAATGAGTGAGTTCTCACTGTATTAGATCCTG...TGGTTTGGGCATTTGTCTCCTCCAAACCTCATGTTGAGATTTGATCCCCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CCA 90 bp | AGAACATCTCACTTGCCACTCTGTCTTCTCCTAACTGGGGGCTTCTCCTCTTCAAGTTTATTTGAGTCATaGTTCTTACAAGCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTSHLPLCLLLTGGFSSSSLFES*FLQAVQ Trigger: CTGTACAGCTTGTAAGAACCATGACTCAAATAAACT...TGAAGAGGAGAAGCCCCCAGTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS TCA 90 bp | CGCTGTCCAGGTGGTTCAAGCCTAGGTTCACAGCGCGGATGTTCTTaGGTTGCTTCAGCTCCACGGGCAGCCCGTTGCTGGTCAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCPGGSSLGSQRGCS*VASAPRAARCWSAG Trigger: ACCGGCTGACCAGCAACGGGCTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTGTGAACCTAGGCTTGAACCACCTGGACAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCCACGGGCAGCCCGTaGCTGGTCAGCCGGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LASSGEPGFQNISLATLSSTGSP*LVSRLL Trigger: CAACAACCGGCTGACCAGCAACGGGCTGCCCGTGGA...AGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTTCAGCTTGGGGAGCTaGGAGATGCTCACGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RWLGQLRRAWFPEHLTCHFSLGS*EMLTGM Trigger: CATCCCCGTGAGCATCTCCAAGCTCCCCAAGCTGAA...GTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 90 bp | GGGAGCTTGGAGATGCTCACGGGGATGTTGTTCAGTAGGTTGTCATaGAGCCCTACCTCGTGGAGCTCCTTCAGGGCCCCCAGTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLEMLTGMLFSRLS*SPTSWSSFRAPSVV Trigger: CACCACACTGGGGGCCCTGAAGGAGCTCCACGAGGTAGGGCTCCATGACAACCTACTGAACAACATCCCCGTGAGCATCTCCAAGCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACCGGAGGTTCTGGAACTaGGAGATGGAGTCAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RWLGQLRRAWFPEHLTCHRRFWN*EMESGI Trigger: GATCCCTGACTCCATCTCCAAGTTCCAGAACCTCCG...GTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACACAGCGCGGATGTTCTaGAGTTGCTTCAGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RWLGQLRRAWFPEHLTCHTARMF*SCFSST Trigger: CGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTGT...GTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS GCA 90 bp | TCCAGGTGGTTCAAGCCTAGGTTCACAGCGCGGATGTTCTTGAGTTaGTTCAGCTCCACGGGCAGCCCGTTGCTGGTCAGCCGGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRWFKPRFTARMFLS*FSSTGSPLLVSRLL Trigger: CAACAACCGGCTGACCAGCAACGGGCTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTGTGAACCTAGGCTTGAACCACCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | TCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACAAGCAAGTCGGTGGCTaGGCCAGCTCCGGCGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGEPGFQNISLATLSSPNKQVGG*ASSGEP Trigger: AGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTT...GTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | GTGAATTTGAGAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCCCGACTCACCTGGCTTaGGAAAGGGGTTCCGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VNLRSKSVAWPAPASLVSPTHLA*ERGSAL Trigger: TAAAGCGGAACCCCTTTCCAAAGCCAGGTGAGTCGG...GGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTTCTCAAATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGGTTGTCCCGGGCGTTTaGGCATTTTCTCAGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSVAWPAPASLVSRTSHLVVPGV*AFSQAS Trigger: GCTTGCCTGAGAAAATGCCAAAACGCCCGGGACAAC...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS GCA 90 bp | GGCTGGTCATCTGGCCAATGGACTCAGGCAGCTTGTCTATGTAGTTaGTGTGCAGGTCCAGCCACCGGAGGTTCTGGAACTTGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GWSSGQWTQAACLCS*CAGPATGGSGTWRW Trigger: CCATCTCCAAGTTCCAGAACCTCCGGTGGCTGGACCTGCACAGCAACTACATAGACAAGCTGCCTGAGTCCATTGGCCAGATGACCAGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTAGGCGCAGAATACACTaGGGGAAGGTGGTAATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LASSGEPGFQNISLATLSRRRIH*GKVVIP Trigger: GGGAATTACCACCTTCCCCAAGTGTATTCTGCGCCT...AGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGATGCTCACGGGGATGTaGTTCAGTAGGTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVAWPAPASLVSRTSHLMLTGM*FSRLSW Trigger: CCATGACAACCTACTGAACAACATCCCCGTGAGCAT...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGTCCTTGGCCATGGAATaGGGTGAGATCAGATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSVAWPAPASLVSRTSHLSLAME*GEIRLG Trigger: TCCCAATCTGATCTCACCCAATTCCATGGCCAAGGA...CAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | TCATGGTGGAAGGTGAAGGGGAGCAGGCATCACATAGTGAGAGGAAGAGAGAGAGCGGATGTTCTTGAGTaGCTTCAGCTCCACGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWWKVKGSRHHIVRGRERADVLE*LQLHGQ Trigger: CTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCGC...TCTCTCTCTTCCTCTCACTATGTGATGCCTGCTCCCCTTCACCTTCCACCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCCAGCTCCGGCGAGCCTGGTTTCCAGAACATCTCACTTGCCACTCTGTCTATGTTGTTCAGTAGGTaGTCATGGAGCCCTACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LASSGEPGFQNISLATLSMLFSR*SWSPTS Trigger: CGAGGTAGGGCTCCATGACAACCTACTGAACAACAT...AGACAGAGTGGCAAGTGAGATGTTCTGGAAACCAGGCTCGCCGGAGCTGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | GTGAATTTGAGAAGCAAGTCGGTGGCTTGGCCAGCTCCGGCGAGCCTGGTTTCCTTGATTCTATTCAGGTaGTCCCGGGCGTTTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VNLRSKSVAWPAPASLVSLILFR*SRAFWH Trigger: ATGCCAAAACGCCCGGGACAACCTGAATAGAATCAA...GGAAACCAGGCTCGCCGGAGCTGGCCAAGCCACCGACTTGCTTCTCAAATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACTGGGGGCTTCTCCCAATTCCTGGCCACCTaGAGGGTGATCTTCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSRTSHLPLCLLLTGGFSQFLAT*RVIFLP Trigger: GGGCAAGAAGATCACCCTCAAGGTGGCCAGGAATTG...GGAGAAGCCCCCAGTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 90 bp | GTCGTGGCCATGTTCTTGATTCTATTCAGGTTGTCCCGGGCGTTTTaGCATTTTCTCAGGCAAGCCGCACACAGATCCTTCTCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VVAMFLILFRLSRAF*HFLRQAAHRSFSST Trigger: TGTGGAGGAGAAGGATCTGTGTGCGGCTTGCCTGAGAAAATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 90 bp | TCAAGCGTATTCTCCAGTCTTCCCAGGAGTCCTTGGCCATGGAATTaGGTGAGATCAGATTGGGAAAGATGGTCTTTCTCGGTGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSVFSSLPRSPWPWN*VRSDWERWSFSVSS Trigger: CGACGACACCGAGAAAGACCATCTTTCCCAATCTGATCTCACCCAATTCCATGGCCAAGGACTCCTGGGAAGACTGGAGAATACGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | AGAACATCTCACTTGCCACTCTGTCTTCTCCTAACTGGGGGCTTCTCCTCTTCAGTGATCTTCTTGCCCTaGGGGCCTTTCTCACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RTSHLPLCLLLTGGFSSSVIFLP*GPFSPL Trigger: TAAGGGTGAGAAAGGCCCCAAGGGCAAGAAGATCAC...TGAAGAGGAGAAGCCCCCAGTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | TCATTACCAAAAGGATGGCACCAGGCCATTCATGAGGGACCCACCCCCATGACCCCATCAAAAGTGATTTaGATGCAATTCCTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLPKGWHQAIHEGPTPMTPSKVI*MQFLAT Trigger: GGTGGCCAGGAATTGCATCAAAATCACTTTTGATGG...GGTCATGGGGGTGGGTCCCTCATGAATGGCCTGGTGCCATCCTTTTGGTAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS TCA 90 bp | GATTGGGAAAGATGGTCTTTCTCGGTGTCGTCGTGGCCATGTTCTTaGTTCTATTCAGGTTGTCCCGGGCGTTTTGGCATTTTCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DWERWSFSVSSWPCS*FYSGCPGRFGIFSG Trigger: GCCTGAGAAAATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGACGACACCGAGAAAGACCATCTTTCCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAGAACATCTCACTTGCCACTCTGTCTTCTCCTAACTGGGGGCTTCTCCGTGGTAATTCCCATCTaGCTCAAGTCAAGGCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSRTSHLPLCLLLTGGFSVVIPI*LKSRRF Trigger: AAAGCGCCTTGACTTGAGCAAGATGGGAATTACCAC...GGAGAAGCCCCCAGTTAGGAGAAGACAGAGTGGCAAGTGAGATGTTCTGGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 90 bp | AAGATGTCAAGCGTATTCTCCAGTCTTCCCAGGAGTCCTTGGCCATaGAATTGGGTGAGATCAGATTGGGAAAGATGGTCTTTCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KMSSVFSSLPRSPWP*NWVRSDWERWSFSV Trigger: CACCGAGAAAGACCATCTTTCCCAATCTGATCTCACCCAATTCCATGGCCAAGGACTCCTGGGAAGACTGGAGAATACGCTTGACATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 90 bp | GTTCTCCAGCCTCCTGATGGAGTCTATGAATATTTCCGACTCACCTaGCTTTGGAAAGGGGTTCCGCTTTATGTTGAGCTTTTTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLQPPDGVYEYFRLT*LWKGVPLYVELFQL Trigger: AAGCTGAAAAAGCTCAACATAAAGCGGAACCCCTTTCCAAAGCCAGGTGAGTCGGAAATATTCATAGACTCCATCAGGAGGCTGGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAGAGAGAGAGGAGAGGGAGGTGCCAAGGTCTTTTTAACAATCAATTTGTCGTGGCCATGTTCTaGATTCTATTCAGGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EEERERRGRCQGLFNNQFVVAMF*ILFRLS Trigger: GGACAACCTGAATAGAATCAAGAACATGGCCACGAC...AAATTGATTGTTAAAAAGACCTTGGCACCTCCCTCTCCTCTCTCTCTCTTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 72 bp | GCCCTACCTCGTGGAGCTCCTTCAGGGCCCCCAGTGTaGTGGGCACGCTGTCCAGGTGGTTCAAGCCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALPRGAPSGPPV*WARCPGGSSLG Trigger: ACCTAGGCTTGAACCACCTGGACAGCGTGCCCACCACACTGGGGGCCCTGAAGGAGCTCCACGAGGTAGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 90 bp | ACGCTGTCCAGGTGGTTCAAGCCTAGGTTCACAGCGCGGATGTTCTaGAGTTGCTTCAGCTCCACGGGCAGCCCGTTGCTGGTCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLSRWFKPRFTARMF*SCFSSTGSPLLVSR Trigger: CCGGCTGACCAGCAACGGGCTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTGTGAACCTAGGCTTGAACCACCTGGACAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS TCA 72 bp | GGTGGTTCAAGCCTAGGTTCACAGCGCGGATGTTCTTaGGTTGCTTCAGCTCCACGGGCAGCCCGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSSLGSQRGCS*VASAPRAARCW Trigger: CCAGCAACGGGCTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTGTGAACCTAGGCTTGAACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 72 bp | GAGATGCTCACGGGGATGTTGTTCAGTAGGTTGTCATaGAGCCCTACCTCGTGGAGCTCCTTCAGGGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EMLTGMLFSRLS*SPTSWSSFRAP Trigger: GGGGGCCCTGAAGGAGCTCCACGAGGTAGGGCTCCATGACAACCTACTGAACAACATCCCCGTGAGCATCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 72 bp | AGGTGGTTCAAGCCTAGGTTCACAGCGCGGATGTTCTaGAGTTGCTTCAGCTCCACGGGCAGCCCGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RWFKPRFTARMF*SCFSSTGSPLL Trigger: CAGCAACGGGCTGCCCGTGGAGCTGAAGCAACTCAAGAACATCCGCGCTGTGAACCTAGGCTTGAACCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS GCA 72 bp | TCTGGCCAATGGACTCAGGCAGCTTGTCTATGTAGTTaGTGTGCAGGTCCAGCCACCGGAGGTTCTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SGQWTQAACLCS*CAGPATGGSGT Trigger: AGTTCCAGAACCTCCGGTGGCTGGACCTGCACAGCAACTACATAGACAAGCTGCCTGAGTCCATTGGCCAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 72 bp | TTCAGCTTGGGGAGCTTGGAGATGCTCACGGGGATGTaGTTCAGTAGGTTGTCATGGAGCCCTACCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSLGSLEMLTGM*FSRLSWSPTSW Trigger: CCACGAGGTAGGGCTCCATGACAACCTACTGAACAACATCCCCGTGAGCATCTCCAAGCTCCCCAAGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 72 bp | AGGAGTCCTTGGCCATGGAATTGGGTGAGATCAGATTaGGAAAGATGGTCTTTCTCGGTGTCGTCGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPWPWNWVRSD*ERWSFSVSSWP Trigger: TGGCCACGACGACACCGAGAAAGACCATCTTTCCCAATCTGATCTCACCCAATTCCATGGCCAAGGACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 72 bp | GGTGTCGTCGTGGCCATGTTCTTGATTCTATTCAGGTaGTCCCGGGCGTTTTGGCATTTTCTCAGGCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVVVAMFLILFR*SRAFWHFLRQA Trigger: GGCTTGCCTGAGAAAATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGACGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 90 bp | CGGCTAAGGTCCAGCTCGTCCATGTCACTAAGGCGCAGAATACACTaGGGGAAGGTGGTAATTCCCATCTTGCTCAAGTCAAGGCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLRSSSSMSLRRRIH*GKVVIPILLKSRRF Trigger: AAAGCGCCTTGACTTGAGCAAGATGGGAATTACCACCTTCCCCAAGTGTATTCTGCGCCTTAGTGACATGGACGAGCTGGACCTTAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 90 bp | GTCTTTCTCGGTGTCGTCGTGGCCATGTTCTTGATTCTATTCAGGTaGTCCCGGGCGTTTTGGCATTTTCTCAGGCAAGCCGCACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: VFLGVVVAMFLILFR*SRAFWHFLRQAAHR Trigger: TCTGTGTGCGGCTTGCCTGAGAAAATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGACGACACCGAGAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 90 bp | GTCAAGCGTATTCTCCAGTCTTCCCAGGAGTCCTTGGCCATGGAATaGGGTGAGATCAGATTGGGAAAGATGGTCTTTCTCGGTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VKRILQSSQESLAME*GEIRLGKMVFLGVV Trigger: GACGACACCGAGAAAGACCATCTTTCCCAATCTGATCTCACCCAATTCCATGGCCAAGGACTCCTGGGAAGACTGGAGAATACGCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS TCA 72 bp | AGATGGTCTTTCTCGGTGTCGTCGTGGCCATGTTCTTaGTTCTATTCAGGTTGTCCCGGGCGTTTTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: RWSFSVSSWPCS*FYSGCPGRFGI Trigger: AATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGACGACACCGAGAAAGACCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 72 bp | TCCAGCTCGTCCATGTCACTAAGGCGCAGAATACACTaGGGGAAGGTGGTAATTCCCATCTTGCTCAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSMSLRRRIH*GKVVIPILLKS Trigger: TGACTTGAGCAAGATGGGAATTACCACCTTCCCCAAGTGTATTCTGCGCCTTAGTGACATGGACGAGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 72 bp | AAGATGGTCTTTCTCGGTGTCGTCGTGGCCATGTTCTaGATTCTATTCAGGTTGTCCCGGGCGTTTTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KMVFLGVVVAMF*ILFRLSRAFWH Trigger: ATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGACGACACCGAGAAAGACCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 90 bp | AGATTGGGAAAGATGGTCTTTCTCGGTGTCGTCGTGGCCATGTTCTaGATTCTATTCAGGTTGTCCCGGGCGTTTTGGCATTTTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGKMVFLGVVVAMF*ILFRLSRAFWHFLR Trigger: CCTGAGAAAATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACATGGCCACGACGACACCGAGAAAGACCATCTTTCCCAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 72 bp | ATGTTCTTGATTCTATTCAGGTTGTCCCGGGCGTTTTaGCATTTTCTCAGGCAAGCCGCACACAGATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MFLILFRLSRAF*HFLRQAAHRSF Trigger: GAAGGATCTGTGTGCGGCTTGCCTGAGAAAATGCCAAAACGCCCGGGACAACCTGAATAGAATCAAGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CAA 90 bp | CCCATCTTGCTCAAGTCAAGGCGCTTTTTCCCATCAAAAGTGATTTaGATGCAATTCCTGGCCACCTTGAGGGTGATCTTCTTGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PILLKSRRFFPSKVI*MQFLATLRVIFLPL Trigger: CAAGGGCAAGAAGATCACCCTCAAGGTGGCCAGGAATTGCATCAAAATCACTTTTGATGGGAAAAAGCGCCTTGACTTGAGCAAGATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 72 bp | CCTCCTGATGGAGTCTATGAATATTTCCGACTCACCTaGCTTTGGAAAGGGGTTCCGCTTTATGTTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPDGVYEYFRLT*LWKGVPLYVEL Trigger: AAGCTCAACATAAAGCGGAACCCCTTTCCAAAGCCAGGTGAGTCGGAAATATTCATAGACTCCATCAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||
| CDS CCA 72 bp | GATGGAGTCTATGAATATTTCCGACTCACCTGGCTTTaGAAAGGGGTTCCGCTTTATGTTGAGCTTTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DGVYEYFRLTWL*KGVPLYVELFQ Trigger: CTGAAAAAGCTCAACATAAAGCGGAACCCCTTTCCAAAGCCAGGTGAGTCGGAAATATTCATAGACTCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374160.7 |
||