RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC14B (Homo sapiens)

Ensembl gene IDs: ENSG00000185028

Ensembl transcript IDs: ENST00000328278.4

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGAGAAACAGTGGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTaGCCGCCCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCA +
Preference number: 1 (lower is better)
Translates to: GEKQWRGRAKASPQR*PPWSRRLFSGRLCS
Trigger: TGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCCACTGTTTCTCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR TCA 90 bp CCTCCCGGGCTTCTCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTaGCCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACC +
Preference number: 1 (lower is better)
Translates to: PPGLLCSLPCGVCPR*PCHCLLVASPASRT
Trigger: GGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGAAGCCCGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp TGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTGGTaGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAAGGG +
Preference number: 1 (lower is better)
Translates to: CHVASAPADPVTVSW*LPPPPEPCRAATKG
Trigger: CCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp TCGGCCACTCCTCACACCTCCCGGGCTTCTCTGCTCTTTGCCATGTaGCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTGGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: SATPHTSRASLLFAM*RLPPLTLSLSLGGF
Trigger: GAAGCCACCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGAAGCCCGGGAGGTGTGAGGAGTGGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp CCCGTAAGCGGCAGGTCCAGACAGCGGGTTGTGACCAGCAGTGGGTaGGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCAT +
Preference number: 1 (lower is better)
Translates to: PVSGRSRQRVVTSSG*EPPAGGSRVRFAVH
Trigger: ATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCCCACCCACTGCTGGTCACAACCCGCTGTCTGGACCTGCCGCTTACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 90 bp GACCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTaGCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: DPVTVSWWLPPPPEP*RAATKGHRMAPLLE
Trigger: TTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 90 bp GGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATaGCCCTCACGGTTCTGGGGGCTACACAAAGTGAGAAGAAAAGCC +
Preference number: 1 (lower is better)
Translates to: GPGGSSADACAHPLG*PSRFWGLHKVRRKA
Trigger: GGCTTTTCTTCTCACTTTGTGTAGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp CTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTaGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAA +
Preference number: 1 (lower is better)
Translates to: LCHVASAPADPVTVS*WLPPPPEPCRAATK
Trigger: TTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 90 bp AGAAGAAAAGCCACCACTAACAGCAACCAGAAGCCCCGCGTTCCCTaGAGGCCCACCTCATCCCGTAAGCGGCAGGTCCAGACAGCGGGT +
Preference number: 1 (lower is better)
Translates to: RRKATTNSNQKPRVP*RPTSSRKRQVQTAG
Trigger: ACCCGCTGTCTGGACCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAGTGGTGGCTTTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp CCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAAGGGCACCGCATaGCACCTCTCCTGGAAGGCTTCCTCTTCTACAACGCTTAACAGG +
Preference number: 1 (lower is better)
Translates to: PRLQNLAVLPLKGTA*HLSWKASSSTTLNR
Trigger: CCTGTTAAGCGTTGTAGAAGAGGAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp GTCCAGACAGCGGGTTGTGACCAGCAGTGGGTGGGAGCCTCCTGCTaGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTT +
Preference number: 1 (lower is better)
Translates to: VQTAGCDQQWVGASC*RKQGPVCCSFFASF
Trigger: AAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCCCACCCACTGCTGGTCACAACCCGCTGTCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp AACCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTaGAAGGCTTCCTCTTCTACAACGCTTAACAGGCTCGCCTACAAT +
Preference number: 1 (lower is better)
Translates to: NLAVLPLKGTAWHLS*KASSSTTLNRLAYN
Trigger: ATTGTAGGCGAGCCTGTTAAGCGTTGTAGAAGAGGAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 90 bp CACAAAGTCACTCTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTaGTTGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAA +
Preference number: 1 (lower is better)
Translates to: HKVTLGGHQVQMCLR*LSAPPGAGQVLDLQ
Trigger: TTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAGAGTGACTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 90 bp CGCATTTTATTTGCATTTAGTTATTCTAGTGCTCAGCCATTTCTTTaGACAAAGTCACTCTTGGTGGACACCAAGTCCAAATGTGTCTTA +
Preference number: 1 (lower is better)
Translates to: RILFAFSYSSAQPFL*TKSLLVDTKSKCVL
Trigger: TAAGACACATTTGGACTTGGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACTAAATGCAAATAAAATGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCCCGCCTCCAGAACCTTaGCGTGCTGCCACTAAAGGG +
Preference number: 2 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGPPPEP*RAATKG
Trigger: CCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGG...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR TCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCGGGGCACCTGCAGGCTaGAATGCAAGACCTGTCACT +
Preference number: 2 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGGAPAG*NARPVT
Trigger: AGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCC...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR TCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCGTCACATCTGCCCCCTaGAGCTTCATCTTGCGCCCA +
Preference number: 2 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGVTSAP*SFILRP
Trigger: TGGGCGCAAGATGAAGCTTCAGGGGGCAGATGTGAC...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp GCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGCGCCCAGTGCCCAGATaGGCTGAGGCCAGGTCGGCC +
Preference number: 2 (lower is better)
Translates to: ATRSPAFPAGPPHPVSGRRPVPR*AEARSA
Trigger: GGCCGACCTGGCCTCAGCGCATCTGGGCACTGGGCG...CCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CCA 90 bp CCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCCCCCTCCCTGCTGTaGAGCCCAGTCACATCTGCC +
Preference number: 2 (lower is better)
Translates to: PGPGGSSADACAHPLGCPSPSLL*SPVTSA
Trigger: GGCAGATGTGACTGGGCTCCACAGCAGGGAGGGGGA...GGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCCCTCCCGGGCTTCTCTaGTCTTTGCCATGTGGCGTC +
Preference number: 2 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLPPGLL*SLPCGV
Trigger: GACGCCACATGGCAAAGAGCAGAGAAGCCCGGGAGG...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CCA 90 bp TTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCACGGTTCTGGGGGCTGTGACCAGCAGTGGGTaGGAGCCTCCTGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: FSGRLCSPTRMPLTVLGAVTSSG*EPPAGG
Trigger: TCCTCCAGCAGGAGGCTCCCACCCACTGCTGGTCAC...AGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp AACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGTCCCCTCCCCCTCCCTaGTGTGGAGCCCAGTCACAT +
Preference number: 2 (lower is better)
Translates to: NSNQKPRVPCRPTSSRKRSPPPP*CGAQSH
Trigger: ATGTGACTGGGCTCCACAGCAGGGAGGGGGAGGGGA...CCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR TCA 90 bp CGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCCTCTTCTGGTGGTGGTGGGGATaGATGCCGGGCCCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: RAATKGHRMAPLLEGFLFWWWWG*MPGPSL
Trigger: GAGGCTTGGGCCCGGCATTCATCCCCACCACCACCA...GAAGAGGAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp AACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGTCATCTTGCGCCCAGTaGCCAGATGCGCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: NSNQKPRVPCRPTSSRKRSSCAQ*PDALRP
Trigger: TGGCCTCAGCGCATCTGGGCACTGGGCGCAAGATGA...CCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CCA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGTTGTGACCAGCAGTaGGTGGGAGCCTCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSGCDQQ*VGASCW
Trigger: CCAGCAGGAGGCTCCCACCCACTGCTGGTCACAACC...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp AACACCCGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGTGGGTGGGAGCCTCCTaGTGGAGGAAGCAGGGTCCG +
Preference number: 2 (lower is better)
Translates to: NTRNSSRQSKPQAPQDTVWVGAS*WRKQGP
Trigger: CGGACCCTGCTTCCTCCAGCAGGAGGCTCCCACCCA...CACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR TCA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTGGCGTCTGCCCCCGCTaGCCCTGTCACTGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVGVCPR*PCHCLL
Trigger: CAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCC...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR TCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGCCAGACAGCGGGTTGTaGCCAGCAGTGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGPDSGL*PAVGGS
Trigger: GCTCCCACCCACTGCTGGTCACAACCCGCTGTCTGG...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CCA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGCATGGCACCTCTCCTaGAAGGCTTCCTCTTCTACA +
Preference number: 2 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSAWHLS*KASSST
Trigger: TGTAGAAGAGGAAGCCTTCCAGGAGAGGTGCCATGC...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTAAAGCCCGGGGCACCTaGAGGCTGAAATGCAAGACC +
Preference number: 2 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVKARGT*RLKCKT
Trigger: GGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTT...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGCTAAAGGGCACCGCATaGCACCTCTCCTGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGLKGTA*HLSWKA
Trigger: AGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAG...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCTTGTTTTTCATGGGCTaGTTATTTTGTGCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLLFFMG*LFCAVS
Trigger: AGAAACTGCACAAAATAAGCAGCCCATGAAAAACAA...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCGGTGGTGGGGATGAATaGCGGGCCCAAGCCTCAGAT +
Preference number: 2 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTGGGDE*RAQASD
Trigger: ATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACC...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CAA 90 bp AAAGTCACTCTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTaGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTA +
Preference number: 2 (lower is better)
Translates to: KVTLGGHQVQMCLRW*SAPPGAGQVLDLQL
Trigger: TAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAGAGTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR GCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGATTTTCACTAAGAACTaGTTTTGGTGGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSIFTKN*FWWWWW
Trigger: CCACCACCACCACCAAAAGCAGTTCTTAGTGAAAAT...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCACTAAGAACTGCTTTTaGTGGTGGTGGTGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTTKNCF*WWWWWG
Trigger: TCCCCACCACCACCACCACCAAAAGCAGTTCTTAGT...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CAA 90 bp TTTAGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTaGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: FSYSSAQPFLCTKSL*VDTKSKCVLGGCQL
Trigger: GAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 72 bp CCGCCCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTaGTCACCCACTCGGATGCCCCTCACGGTTCTGGGG +
Preference number: 3 (lower is better)
Translates to: PPWSRRLFSGRL*SPTRMPLTVLG
Trigger: CCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 72 bp GCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTGGTaGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: ASAPADPVTVSW*LPPPPEPCRAA
Trigger: GGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CAA 90 bp AACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCCCTGTCACTGTCTCTaGGTGGCTTCCCCCGCCTCC +
Preference number: 3 (lower is better)
Translates to: NSNQKPRVPCRPTSSRKRPCHCL*VASPAS
Trigger: GGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGG...CCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 72 bp GCCACCACTAACAGCAACCAGAAGCCCCGCGTTCCCTaGAGGCCCACCTCATCCCGTAAGCGGCAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: ATTNSNQKPRVP*RPTSSRKRQVQ
Trigger: CTGGACCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAGTGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 72 bp GGCAGGTCCAGACAGCGGGTTGTGACCAGCAGTGGGTaGGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTT +
Preference number: 3 (lower is better)
Translates to: GRSRQRVVTSSG*EPPAGGSRVRF
Trigger: AAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCCCACCCACTGCTGGTCACAACCCGCTGTCTGGACCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR TCA 72 bp CTTCTCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTaGCCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCC +
Preference number: 3 (lower is better)
Translates to: LLCSLPCGVCPR*PCHCLLVASPA
Trigger: GGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 72 bp TCACATCTGCCCCCTGAAGCTTCATCTTGCGCCCAGTaGCCAGATGCGCTGAGGCCAGGTCGGCCACTCCTC +
Preference number: 3 (lower is better)
Translates to: SHLPPEASSCAQ*PDALRPGRPLL
Trigger: GAGGAGTGGCCGACCTGGCCTCAGCGCATCTGGGCACTGGGCGCAAGATGAAGCTTCAGGGGGCAGATGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 72 bp ACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTaGCGTGCTGCCACTAAAGGGCACCGCATGGCACCT +
Preference number: 3 (lower is better)
Translates to: TVSWWLPPPPEP*RAATKGHRMAP
Trigger: AGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 72 bp GGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATaGCCCTCACGGTTCTGGGGGCTACACAAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: GSSADACAHPLG*PSRFWGLHKVR
Trigger: TCTCACTTTGTGTAGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CAA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGAAGCAGGGTCCGGTTaGCTGTTCATTTTTCGCCTC +
Preference number: 3 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSEAGSG*LFIFRL
Trigger: GAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTC...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR TCA 72 bp TCAGATCCAGGACTAAAGCCCGGGGCACCTGCAGGCTaGAATGCAAGACCTGTCACTGGTGCGAGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: SDPGLKPGAPAG*NARPVTGASGG
Trigger: TCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTTAGTCCTGGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR GCA 72 bp AGAACTGCTTTTGGTGGTGGTGGTGGTGGGGATGAATaGCGGGCCCAAGCCTCAGATCCAGGACTAAAGCCC +
Preference number: 3 (lower is better)
Translates to: RTAFGGGGGGDE*RAQASDPGLKP
Trigger: GGGCTTTAGTCCTGGATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACCACCACCACCAAAAGCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 72 bp CAGAACCTTGCCGTGCTGCCACTAAAGGGCACCGCATaGCACCTCTCCTGGAAGGCTTCCTCTTCTACAACG +
Preference number: 3 (lower is better)
Translates to: QNLAVLPLKGTA*HLSWKASSSTT
Trigger: CGTTGTAGAAGAGGAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 72 bp GTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTaGAAGGCTTCCTCTTCTACAACGCTTAACAGGCTC +
Preference number: 3 (lower is better)
Translates to: VLPLKGTAWHLS*KASSSTTLNRL
Trigger: GAGCCTGTTAAGCGTTGTAGAAGAGGAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR TCA 72 bp ACTAAGAACTGCTTTTGGTGGTGGTGGTGGTGGGGATaGATGCCGGGCCCAAGCCTCAGATCCAGGACTAAA +
Preference number: 3 (lower is better)
Translates to: TKNCFWWWWWWG*MPGPSLRSRTK
Trigger: TTTAGTCCTGGATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACCACCACCACCAAAAGCAGTTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CCA 72 bp ACTCTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTaGTTGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTA +
Preference number: 3 (lower is better)
Translates to: TLGGHQVQMCLR*LSAPPGAGQVL
Trigger: TAGCACTTGACCAGCCCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CAA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGGCCTCTTTTTCTCGGTaGTTTTTCATGGGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGASFSR*FFMGCL
Trigger: TAAGCAGCCCATGAAAAACAACCGAGAAAAAGAGGC...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR-3UTR CAA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCCATGGGCTGCTTATTTaGTGCAGTTTCTGTGATGTG +
Preference number: 3 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTHGLLI*CSFCDV
Trigger: CACATCACAGAAACTGCACAAAATAAGCAGCCCATG...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCCGGGGGAAGCCCACCTaGGCCAGAAGCTGCTGCACG +
Preference number: 4 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGRGKPT*ARSCCT
Trigger: CGTGCAGCAGCTTCTGGCCCAGGTGGGCTTCCCCCG...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCGTCCTGGCCAGCAGCTaGGTGCGGCCCCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGPGGSSADACAHPLGCPVLASS*VRPHLP
Trigger: GGGCAGGTGGGGCCGCACCCAGCTGCTGGCCAGGAC...GGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCCGGGGTAGCAGTCCTTaGGCACCGGGAACTCAATGC +
Preference number: 4 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGRGSSP*APGTQC
Trigger: GCATTGAGTTCCCGGTGCCCAAGGACTGCTACCCCG...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCCTAAAGGGCACCGCATaGCACCTCTCCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGLKGTA*HLSWKA
Trigger: AGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAG...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCGGTTCCCGAGGAACTTaGGCTGGCGCAGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGPGGSSADACAHPLGCPGSRGT*AGAAGG
Trigger: GCCACCGGCTGCGCCAGCTCAAGTTCCTCGGGAACC...GGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGCGGTCCTGCAGCACGTaGTCCGCGAGGCCGCGCACC +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQRSCST*SARPRT
Trigger: GGTGCGCGGCCTCGCGGACCACGTGCTGCAGGACCG...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGCTCACAGAGTGCGGTaGAGAGGCGCCGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQAHRVR*RGAGGR
Trigger: GCGCCCTCCGGCGCCTCTTCACCGCACTCTGTGAGC...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCCGGAACGAGGGGCAGTaGACCCGCAGAGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PVTVSWWLPPPPEPCRAARNEGQ*TRRGAG
Trigger: CCCGGCCCCTCTGCGGGTGCACTGCCCCTCGTTCCG...GGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCGGCGTCTGCCCCCGCTaGCCCTGTCACTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLGVCPR*PCHCLL
Trigger: CAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCC...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCGGCTGCGAGGGGCTCTaGCTGCAGCTCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLGCEGL*LQLTAG
Trigger: ACCTGCTGTGAGCTGCAGGCAGAGCCCCTCGCAGCC...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGAAGCCCCGCGTTCCCTaGAGGCCCACCTCATCCCGT +
Preference number: 4 (lower is better)
Translates to: ATRSPAFPAGPPHPVSGRKPRVP*RPTSSR
Trigger: ACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTT...CCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGTGGTGGTGGTGGTGGGGATGAATGCCGGGCCCAAGCCTCAGATCCAGGACTAAGCTGGCGCAGCCGGTaGCAGGGGCTCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGGGGDECRAQASDPGLSWRSR*QGLRPR
Trigger: CCTGGGCCTGAGCCCCTGCCACCGGCTGCGCCAGCT...TAGTCCTGGATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACCACCACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGTGGTGGTGGTGGGGATaGATGCCGGGCCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQWWWWG*MPGPSL
Trigger: GAGGCTTGGGCCCGGCATTCATCCCCACCACCACCA...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp TCCCGGGCTTCTCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCAGCCAGACGCAGCACGTaGAGGAGCTGGCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRASLLFAMWRLPPLTLSARRST*RSWLGL
Trigger: GAGCCCCAGCCAGCTCCTGCACGTGCTGCGTCTGGC...TGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGAAGCCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAAGGGCACCGCATGCACGTGGCCCGCATaGAGCCGCACGTTGTGCACC +
Preference number: 4 (lower is better)
Translates to: GGFPRLQNLAVLPLKGTACTWPA*SRTLCT
Trigger: GGTGCACAACGTGCGGCTGCATGCGGGCCACGTGCA...TGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGGTGGGAGCCTCCTaGTGGAGGAAGCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GGFPRLQNLAVLPLKGTAWVGAS*WRKQGP
Trigger: CGGACCCTGCTTCCTCCAGCAGGAGGCTCCCACCCA...TGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCTTCAGCGGACGCCTGTaGTCACCCACTCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLFSGRL*SPTRMP
Trigger: GGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAA...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGGGTTGTGACCAGCAGTaGGTGGGAGCCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ATRSPAFPAGPPHPVSGRGCDQQ*VGASCW
Trigger: CCAGCAGGAGGCTCCCACCCACTGCTGGTCACAACC...CCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCCCAGGTTGTGTCCACTaGGGTCCAGCACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLPGCVH*GPAPPG
Trigger: ACCTGGAGGTGCTGGACCTCAGTGGACACAACCTGG...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AACACCCGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGTGGCCAGCAGCTGGGTaGGGCCCCACCTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: NTRNSSRQSKPQAPQDTVWPAAG*GPTCPA
Trigger: CGCTGGGCAGGTGGGGCCGCACCCAGCTGCTGGCCA...CACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCGGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCGCTCAGCCATTTCTTTaGACAAAGTCACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGAQPFL*TKSLLV
Trigger: CACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGC...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCACCTCATTGTGTCCATaGCCCGAGACAGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: PGPGGSSADACAHPLGCPTSLCP*PETGPL
Trigger: GAGCGGTCCTGTCTCGGGCCATGGACACAATGAGGT...GGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCTGTCACTGGTGCGAGTaGAGGAACTACTCTATTTGT +
Preference number: 4 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGCHWCE*RNYSIC
Trigger: ACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACA...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAAGGGCACCGCACTGCTCTTTGCCATGTaGCGTCTGCCCCCGCTGACC +
Preference number: 4 (lower is better)
Translates to: GGFPRLQNLAVLPLKGTALLFAM*RLPPLT
Trigger: GGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAG...TGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCCCAGACAGCGGGTTGTaGCCAGCAGTGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSPDSGL*PAVGGS
Trigger: GCTCCCACCCACTGCTGGTCACAACCCGCTGTCTGG...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGTGGTGGTGGTGGTGGGGATGAATGCCGGGCCCAAGCCTCAGATCCAGGACTAGGGCACCGCTGCACCTaGACATCTCGGATGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GGGGGGDECRAQASDPGLGHRCT*TSRMPV
Trigger: CACGGGCATCCGAGATGTGCAGGTGCAGCGGTGCCC...TAGTCCTGGATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACCACCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCACTAAAGGGCACCGCAGGTGGTGGGGATGAATaGCGGGCCCAAGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GGFPRLQNLAVLPLKGTAGGGDE*RAQASD
Trigger: ATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACC...TGCGGTGCCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGCTCACCCACTCGGATaGCCCTCACGGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSAHPLG*PSRFWG
Trigger: CCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGC...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp TCCCGGGCTTCTCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCAGTGGGAGCCTCCTGCTaGAGGAAGCAGGGTCCGGTT +
Preference number: 4 (lower is better)
Translates to: SRASLLFAMWRLPPLTLSVGASC*RKQGPV
Trigger: AACCGGACCCTGCTTCCTCCAGCAGGAGGCTCCCAC...TGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGAAGCCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTGCCCCTCACGGTTCTaGGGGCTACACAAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PGPGGSSADACAHPLGCPCPSRF*GLHKVR
Trigger: TCTCACTTTGTGTAGCCCCCAGAACCGTGAGGGGCA...GGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp TTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCACGGTTCTGGGGGCTGTTGGTGAGAAACAGTaGCGCGGTCGGGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FSGRLCSPTRMPLTVLGAVGEKQ*RGRAKA
Trigger: GGCCTTTGCCCGACCGCGCCACTGTTTCTCACCAAC...AGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCCACAGTGAATGTTGGTaGGAAACAGTGGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLHSECW*ETVARS
Trigger: CGACCGCGCCACTGTTTCTCACCAACATTCACTGTG...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTACGCTGTCCAGGCTCTaGCGGGCCACCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GASCWRKQGPVCCSFFASTLSRL*RATWGW
Trigger: CCACCCCCAGGTGGCCCGGCAGAGCCTGGACAGCGT...AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGTGGTGGTGGTGGTGGGGATGAATGCCGGGCCCAAGCCTCAGATCCAGGACTATGCAGCCGCACGTTGTaGACCACCTCCAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GGGGGGDECRAQASDPGLCSRTL*TTSSLR
Trigger: GCGCAAGCTGGAGGTGGTGCACAACGTGCGGCTGCA...TAGTCCTGGATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACCACCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CCCGCTGACCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCCTCCCGGGCTTCTCTaGTCTTTGCCATGTGGCGTC +
Preference number: 4 (lower is better)
Translates to: PADPVTVSWWLPPPPEPCPPGLL*SLPCGV
Trigger: GACGCCACATGGCAAAGAGCAGAGAAGCCCGGGAGG...GCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CCCGCTGACCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCAAAGCCCGGGGCACCTaGAGGCTGAAATGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PADPVTVSWWLPPPPEPCKARGT*RLKCKT
Trigger: GGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTT...GCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCGGCTTCTCTGCTCTTTaGCATGTGGCGTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PCRAATKGHRMAPLLEGFGFSAL*HVASAP
Trigger: GGGGGCAGACGCCACATGGCAAAGAGCAGAGAAGCC...GAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CCCGCTGACCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCCTGAAGCTTCATCTTaGGCCCAGTGCCCAGATGCG +
Preference number: 4 (lower is better)
Translates to: PADPVTVSWWLPPPPEPCPEASS*AQCPDA
Trigger: CGCATCTGGGCACTGGGCGCAAGATGAAGCTTCAGG...GCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTCCGAGGAACTTGAGCTaGCGCAGCCGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GASCWRKQGPVCCSFFASPRNLS*RSRWQG
Trigger: CCCCTGCCACCGGCTGCGCCAGCTCAAGTTCCTCGG...AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCGGGGGCTACACAAAGTaGGAAGAAAAGCCACCACTA +
Preference number: 4 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLGGYTK*EEKPPL
Trigger: TAGTGGTGGCTTTTCTTCTCACTTTGTGTAGCCCCC...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGCCCCGCAGGACACAGTaGATGTTGGTGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQPRRTQ*MLVRNS
Trigger: ACTGTTTCTCACCAACATTCACTGTGTCCTGCGGGG...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGCGGCGGCTCCGGTCCTaGAGCACGTGGTCCGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSRRLRS*STWSAR
Trigger: CCTCGCGGACCACGTGCTGCAGGACCGGAGCCGCCG...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTGGGGAGCTCACAGAGTaGGGTGAAGAGGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GASCWRKQGPVCCSFFASGELTE*GEEAPE
Trigger: CTCCGGCGCCTCTTCACCGCACTCTGTGAGCTCCCC...AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGCGCCCAGTGCCCAGATaGGCTGAGGCCAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGRPVPR*AEARSA
Trigger: GGCCGACCTGGCCTCAGCGCATCTGGGCACTGGGCG...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTCTCTGCCGGGCCACCTaGGGGTGGGACACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVLCRAT*GWDTRA
Trigger: AGCTCTGGTGTCCCACCCCCAGGTGGCCCGGCAGAG...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGTGGTGGTGGTGGTGGGGATGAATGCCGGGCCCAAGCCTCAGATCCAGGACTAAAGGCCATGTCCGTGTaGTTCAGGGCACAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGGGGDECRAQASDPGLKAMSV*FRAQLA
Trigger: GGCCAACTGTGCCCTGAACCACACGGACATGGCCTT...TAGTCCTGGATCTGAGGCTTGGGCCCGGCATTCATCCCCACCACCACCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGATCAGCATGCCAACGTaGCTGTCTACGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQISMPT*LSTMPH
Trigger: GTGTGGCATCGTAGACAGCCACGTTGGCATGCTGAT...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp TTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCACGGTTCTGGGGGCTTGCAAGACCTGTCACTaGTGCGAGTGGAGGAACTAC +
Preference number: 4 (lower is better)
Translates to: FSGRLCSPTRMPLTVLGACKTCH*CEWRNY
Trigger: GTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCA...AGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCGTCACTGTCTCTTGGTaGCTTCCCCCGCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PCRAATKGHRMAPLLEGFVTVSW*LPPPPE
Trigger: TTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGAC...GAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCGCAGGTAGCTGGCTTTaGACAGGAGTGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: PCRAATKGHRMAPLLEGFAGSWL*TGVGRG
Trigger: ACCTCTACCCACTCCTGTTCAAAGCCAGCTACCTGC...GAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAATAGCTCCCGTCAGCATCTCGGATGCCCGTaGGGTCAGCCACCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGQVLDLQLNTRNSSRQHLGCP*GQPPAA
Trigger: GGCTGCGGGTGGCTGACCTCACGGGCATCCGAGATG...CTGACGGGAGCTATTCCGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp GTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAAGCTGCGCCATCTTGCTaGGCTCCCGGGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VSSSRGWSSARPSIKHPEAAPSC*APGRWR
Trigger: CCTCCATCGCCCGGGAGCTCAGCAAGATGGCGCAGC...TTCCGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCCGTGGCTGTCTACGATaGCACACTCCTCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PCRAATKGHRMAPLLEGFRGCLR*HTPPVS
Trigger: TGACACTGGAGGAGTGTGGCATCGTAGACAGCCACG...GAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGCGCAGGTCCTGGGGGTaGTCGGCACCAGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSRRSWG*SAPGPS
Trigger: GCTGGGTCCTGGTGCCGACCACCCCCAGGACCTGCG...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp TCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTGGGGTTCAGGGCACAGTTaGCCAGGTCCAGTACTCGCA +
Preference number: 4 (lower is better)
Translates to: SALCHVASAPADPVTVSWGSGHS*PGPVLA
Trigger: TGCGAGTACTGGACCTGGCCAACTGTGCCCTGAACC...CCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGGCATGGCACCTCTCCTaGAAGGCTTCCTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: NSNQKPRVPCRPTSSRKRAWHLS*KASSST
Trigger: TGTAGAAGAGGAAGCCTTCCAGGAGAGGTGCCATGC...CCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGCAAATGTGTCTTAGGTaGTTGTCAGCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQQMCLR*LSAPPG
Trigger: CCCTGGAGGAGCTGACAACCACCTAAGACACATTTG...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCAGAAATGAAGCGGAGTaGCCTCATTGTGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PVTVSWWLPPPPEPCRAARNEAE*PHCVHG
Trigger: GCCATGGACACAATGAGGTCACTCCGCTTCATTTCT...GGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCGAGCTTCTGCAGAAATaGAGCGGAGTGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: PVTVSWWLPPPPEPCRAAELLQK*SGVTSL
Trigger: CAATGAGGTCACTCCGCTTCATTTCTGCAGAAGCTC...GGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp TCTCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTAGCGTGGGCACAGTCTaGCAAGAAGGCCATGTCCGT +
Preference number: 4 (lower is better)
Translates to: SLLFAMWRLPPLTLSLSLSVGTV*QEGHVR
Trigger: ACGGACATGGCCTTCTTGGCAGACTGTGCCCACGCT...AAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTGCACCGGGAACTCAATaGAGCGCAGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVAPGTQ*SAARGA
Trigger: AGCTCCCCGAGCTGCGCTGCATTGAGTTCCCGGTGC...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGCTCACAGCAGGTCCTaGCCAGCAGCTGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSAHSRS*PAAGCG
Trigger: GCCGCACCCAGCTGCTGGCCAGGACCTGCTGTGAGC...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GTTGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGAGAAGCTGCTGCACGTaGCCCGCATGCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: VVSSSRGWSSARPSIKHPRSCCT*PACSRT
Trigger: CGTGCGGCTGCATGCGGGCCACGTGCAGCAGCTTCT...CGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTCCAGGTGGGCAGCGTaGGCACAGTCTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GASCWRKQGPVCCSFFASSRWAA*AQSAKK
Trigger: CTTCTTGGCAGACTGTGCCCACGCTGCCCACCTGGA...AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGCGAGGGGCTCTGCCTaGAGCTCACAGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSARGSA*SSQQVL
Trigger: CAGGACCTGCTGTGAGCTGCAGGCAGAGCCCCTCGC...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGGCTGGCCTCAGAGCCTaGACCACCGCCTCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGAGLRA*TTASKL
Trigger: CAACTTCGAGGCGGTGGTGCAGGCTCTGAGGCCAGC...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGATCTCGTCGTATTTCTaGTGGTTGAACTTGGACATG +
Preference number: 4 (lower is better)
Translates to: ATRSPAFPAGPPHPVSGRISSYF*WLNLDM
Trigger: CATGTCCAAGTTCAACCAGCAGAAATACGACGAGAT...CCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAATCCAGCACCTCCAGGTaGGCAGCGTGGGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: VSSSRGWSSARPSIKHPESSTSR*AAWAQS
Trigger: AGACTGTGCCCACGCTGCCCACCTGGAGGTGCTGGA...TTCCGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAATAGCTCCCGTCAGGTGACCAGCAGTGGGTaGGAGCCTCCTGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAGQVLDLQLNTRNSSRQVTSSG*EPPAGG
Trigger: TCCTCCAGCAGGAGGCTCCCACCCACTGCTGGTCAC...CTGACGGGAGCTATTCCGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp GTTGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGCGAAGTTGCCCTCAGTaGCGAAGAGGTCGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VVSSSRGWSSARPSIKHPRSCPQ*RRGRRG
Trigger: TCCTCGCCGACCTCTTCGTCACTGAGGGCAACTTCG...CGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GTTGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAGTGGAGGCGTAGGTaGGGGGTGCATCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VVSSSRGWSSARPSIKHPEWRRR*GVHQRP
Trigger: AGGCCTTTGATGCACCCCCCACCTACGCCTCCACTC...CGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTTGGCCAGCTCGTCCTGTaGGTAGGCGGCACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GSRVRFAVHFSPLFLGCFGQLVL*VGGTLG
Trigger: CCCGAGGGTGCCGCCTACCCACAGGACGAGCTGGCC...AAAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCTGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTGTTTCTTGAATGTCTaGGTCAAAACTTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGPGGSSADACAHPLGCPCFLNV*VKTSKE
Trigger: CTCTTTGGAAGTTTTGACCCAGACATTCAAGAAACA...GGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGTCCCCCTCCCTGCTGTaGAGCCCAGTCACATCTGCC +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSSPSLL*SPVTSA
Trigger: GGCAGATGTGACTGGGCTCCACAGCAGGGAGGGGGA...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCGTGCTGCCGCACAAAGTCACTCTTaGTGGACACCAAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PVTVSWWLPPPPEPCRAAAQSHS*WTPSPN
Trigger: ATTTGGACTTGGTGTCCACCAAGAGTGACTTTGTGC...GGCAGCACGGCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGGGGGCACCTGCAGGCTaGAATGCAAGACCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGGAPAG*NARPVT
Trigger: AGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCC...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGGTCACATCTGCCCCCTaGAGCTTCATCTTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGVTSAP*SFILRP
Trigger: TGGGCGCAAGATGAAGCTTCAGGGGGCAGATGTGAC...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp TCCCGGGCTTCTCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCAATTTTCACTAAGAACTaGTTTTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRASLLFAMWRLPPLTLSIFTKN*FWWWWW
Trigger: CCACCACCACCACCAAAAGCAGTTCTTAGTGAAAAT...TGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGAGAAGCCCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGTCATCTTGCGCCCAGTaGCCAGATGCGCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSSSCAQ*PDALRP
Trigger: TGGCCTCAGCGCATCTGGGCACTGGGCGCAAGATGA...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CCCGCTGACCCTGTCACTGTCTCTTGGTGGCTTCCCCCGCCTCCAGAACCTTGCCTCGGTTGTTTTTCATaGGCTGCTTATTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PADPVTVSWWLPPPPEPCLGCFS*AAYFVQ
Trigger: CTGCACAAAATAAGCAGCCCATGAAAAACAACCGAG...GCAAGGTTCTGGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGGTCAGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTAGCTCCTCCAGGGGCTaGTCAAGTGCTAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVSSSRG*SSARPS
Trigger: TGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCT...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCCAAAGTCACTCTTGGTaGACACCAAGTCCAAATGTG +
Preference number: 4 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSQSHSW*TPSPNV
Trigger: CACATTTGGACTTGGTGTCCACCAAGAGTGACTTTG...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp TTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCACGGTTCTGGGGGCTTCATTGCTTGTTTCTTaGATGTCTGGGTCAAAACTT +
Preference number: 4 (lower is better)
Translates to: FSGRLCSPTRMPLTVLGASLLVS*MSGSKL
Trigger: AAGTTTTGACCCAGACATTCAAGAAACAAGCAATGA...AGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp GGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTTCCGCACGGGCACCGCTaGACCTGCACATCTCGGATG +
Preference number: 4 (lower is better)
Translates to: GSRVRFAVHFSPLFLGCFPHGHR*TCTSRM
Trigger: CATCCGAGATGTGCAGGTGCAGCGGTGCCCGTGCGG...AAAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTACCTGGGCCAGAAGCTaGTGCACGTGGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: RKQGPVCCSFFASFSRLFTWARS*CTWPAC
Trigger: GCATGCGGGCCACGTGCAGCAGCTTCTGGCCCAGGT...AAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCCTGTCGCGCAGGTCCTaGGGGTGGTCGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTLSRRS*GWSAPG
Trigger: TCCTGGTGCCGACCACCCCCAGGACCTGCGCGACAG...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp GTTGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGAGAGGTGTGGAGACTTaGATGTCCTCTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VVSSSRGWSSARPSIKHPRGVET*MSSRSA
Trigger: GGCTGACCGAGAGGACATCCAAGTCTCCACACCTCT...CGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CAA 72 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTaGTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGAC +
Preference number: 4 (lower is better)
Translates to: LGGHQVQMCLRW*SAPPGAGQVLD
Trigger: GTCTAGCACTTGACCAGCCCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGTTGTTTTTCATGGGCTaGTTATTTTGTGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQLFFMG*LFCAVS
Trigger: AGAAACTGCACAAAATAAGCAGCCCATGAAAAACAA...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCCGGGCCACCTGGGGGTaGGACACCAGAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTRATWG*DTRASA
Trigger: TGCAGAAGCTCTGGTGTCCCACCCCCAGGTGGCCCG...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGGCTTTGAACAGGAGTaGGTAGAGGTTGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLEEAGSGLLFIFRLFFSGFEQE*VEVVGH
Trigger: GTGGCCCACAACCTCTACCCACTCCTGTTCAAAGCC...CGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTACTAAGAACTGCTTTTaGTGGTGGTGGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVTKNCF*WWWWWG
Trigger: TCCCCACCACCACCACCACCAAAAGCAGTTCTTAGT...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp CCTTGCCGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCACTACTCTATTTGTTTaGGTGCTCTGGAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PCRAATKGHRMAPLLEGFTTLFV*VLWRSF
Trigger: AAAACTTCTCCAGAGCACTCAAACAAATAGAGTAGT...GAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACGGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTCCGCCTCCAGAACCTTaGCGTGCTGCCACTAAAGGG +
Preference number: 4 (lower is better)
Translates to: RKQGPVCCSFFASFSRLFPPPEP*RAATKG
Trigger: CCCTTTAGTGGCAGCACGGCAAGGTTCTGGAGGCGG...AAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCTCCCCTCCCCCTCCCTaGTGTGGAGCCCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTSPPPP*CGAQSH
Trigger: ATGTGACTGGGCTCCACAGCAGGGAGGGGGAGGGGA...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTAGCGTCCGGGAAGCCTaGCTGAGCAGCCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RKQGPVCCSFFASFSRLFSVREA*LSSLKK
Trigger: CTTCTTCAGGCTGCTCAGCCAGGCTTCCCGGACGCT...AAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR TCA 90 bp AACACCCGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGTTTCTAGAGCAGTTTTaGAAGCTTGCAGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: NTRNSSRQSKPQAPQDTVFLEQF*KLAARK
Trigger: CTTTCTTGCTGCAAGCTTTCAAAACTGCTCTAGAAA...CACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCGGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCGGCCCAGGATCAGCATaGCAACGTGGCTGTCTACGA +
Preference number: 4 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTGPGSA*QRGCLR
Trigger: TCGTAGACAGCCACGTTGGCATGCTGATCCTGGGCC...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp CTTGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGTTGTCAGCTCCTCCAGGGGCAGTTTTGAAAGCTTaGAGCAAGAAAGCACCAAGC +
Preference number: 4 (lower is better)
Translates to: LGGHQVQMCLRWLSAPPGAVLKA*SKKAPS
Trigger: GCTTGGTGCTTTCTTGCTGCAAGCTTTCAAAACTGC...CCCTGGAGGAGCTGACAACCACCTAAGACACATTTGGACTTGGTGTCCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTAAGACCTGTCACTGGTaGGAGTGGAGGAACTACTCT +
Preference number: 4 (lower is better)
Translates to: RKQGPVCCSFFASFSRLFKTCHW*EWRNYS
Trigger: AGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTT...AAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR GCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCAAGCAGGGTCCGGTTTaGTGTTCATTTTTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTKQGPV*CSFFAS
Trigger: AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTT...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CCA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCTCGTCGTATTTCTGCTaGTTGAACTTGGACATGGCC +
Preference number: 4 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTSSYFC*LNLDMA
Trigger: GGCCATGTCCAAGTTCAACCAGCAGAAATACGACGA...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
3UTR CAA 72 bp TCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTaGGTGGACACCAAGTCCAAATGTGTCTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSAQPFLCTKSL*VDTKSKCVLGG
Trigger: ACCACCTAAGACACATTTGGACTTGGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp AGGTCAGCCACCCGCAGCCGCCGGCGGCTCCGGTCCTGCAGCACGTaGTCCGCGAGGCCGCGCACCAGCGCCTCCAGGCAGGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RSATRSRRRLRSCST*SARPRTSASRQALQ
Trigger: CTGCAGGGCCTGCCTGGAGGCGCTGGTGCGCGGCCTCGCGGACCACGTGCTGCAGGACCGGAGCCGCCGGCGGCTGCGGGTGGCTGACCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp ATGCCCGTGAGGTCAGCCACCCGCAGCCGCCGGCGGCTCCGGTCCTaGAGCACGTGGTCCGCGAGGCCGCGCACCAGCGCCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MPVRSATRSRRRLRS*STWSARPRTSASRQ
Trigger: CTGCCTGGAGGCGCTGGTGCGCGGCCTCGCGGACCACGTGCTGCAGGACCGGAGCCGCCGGCGGCTGCGGGTGGCTGACCTCACGGGCAT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp CGGCCCCACCTGCCCAGCGCCCTCCCGCACGGGCACCGCTGCACCTaGACATCTCGGATGCCCGTGAGGTCAGCCACCCGCAGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: RPHLPSALPHGHRCT*TSRMPVRSATRSRR
Trigger: CCGGCGGCTGCGGGTGGCTGACCTCACGGGCATCCGAGATGTGCAGGTGCAGCGGTGCCCGTGCGGGAGGGCGCTGGGCAGGTGGGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp CCCTCCCGCACGGGCACCGCTGCACCTGCACATCTCGGATGCCCGTaGGGTCAGCCACCCGCAGCCGCCGGCGGCTCCGGTCCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PSRTGTAAPAHLGCP*GQPPAAAGGSGPAA
Trigger: TGCTGCAGGACCGGAGCCGCCGGCGGCTGCGGGTGGCTGACCTCACGGGCATCCGAGATGTGCAGGTGCAGCGGTGCCCGTGCGGGAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp GCACGTGGTCCGCGAGGCCGCGCACCAGCGCCTCCAGGCAGGCCCTaGAGGTTCTGTCGCGCAGGTCCTGGGGGTGGTCGGCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: ARGPRGRAPAPPGRP*RFCRAGPGGGRHQD
Trigger: GTCCTGGTGCCGACCACCCCCAGGACCTGCGCGACAGAACCTGCAGGGCCTGCCTGGAGGCGCTGGTGCGCGGCCTCGCGGACCACGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp GCAGGGCACCCGGGCCAGCCAGACGCAGCACGTGCAGGAGCTGGCTaGGGCTCAGGCTGTCCGCCCGGAACGAGGGGCAGTGCACCCGCA +
Preference number: 5 (lower is better)
Translates to: AGHPGQPDAARAGAG*GSGCPPGTRGSAPA
Trigger: TGCGGGTGCACTGCCCCTCGTTCCGGGCGGACAGCCTGAGCCCCAGCCAGCTCCTGCACGTGCTGCGTCTGGCTGGCCCGGGTGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp GCAGCTCACAGCAGGTCCTGGCCAGCAGCTGGGTGCGGCCCCACCTaGCCAGCGCCCTCCCGCACGGGCACCGCTGCACCTGCACATCTC +
Preference number: 5 (lower is better)
Translates to: AAHSRSWPAAGCGPT*PAPSRTGTAAPAHL
Trigger: GAGATGTGCAGGTGCAGCGGTGCCCGTGCGGGAGGGCGCTGGGCAGGTGGGGCCGCACCCAGCTGCTGGCCAGGACCTGCTGTGAGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp CGCCCGGAACGAGGGGCAGTGCACCCGCAGAGGGGCCGGGCCCGCTaGCCTCAGAGCCTGCACCACCGCCTCGAAGTTGCCCTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RPERGAVHPQRGRAR*PQSLHHRLEVALSD
Trigger: GTCACTGAGGGCAACTTCGAGGCGGTGGTGCAGGCTCTGAGGCCAGCGGGCCCGGCCCCTCTGCGGGTGCACTGCCCCTCGTTCCGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp TTGCGCAGGGCACCCGGGCCAGCCAGACGCAGCACGTGCAGGAGCTaGCTGGGGCTCAGGCTGTCCGCCCGGAACGAGGGGCAGTGCACC +
Preference number: 5 (lower is better)
Translates to: LRRAPGPARRSTCRS*LGLRLSARNEGQCT
Trigger: GGTGCACTGCCCCTCGTTCCGGGCGGACAGCCTGAGCCCCAGCCAGCTCCTGCACGTGCTGCGTCTGGCTGGCCCGGGTGCCCTGCGCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp CGCCGGAGGGCGCGGGCCGACAGCGGGTTCCCGAGGAACTTGAGCTaGCGCAGCCGGTGGCAGGGGCTCAGGCCCAGGATCAGCATGCCA +
Preference number: 5 (lower is better)
Translates to: RRRARADSGFPRNLS*RSRWQGLRPRISMP
Trigger: TGGCATGCTGATCCTGGGCCTGAGCCCCTGCCACCGGCTGCGCCAGCTCAAGTTCCTCGGGAACCCGCTGTCGGCCCGCGCCCTCCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp GGGCAGTGCACCCGCAGAGGGGCCGGGCCCGCTGGCCTCAGAGCCTaGACCACCGCCTCGAAGTTGCCCTCAGTGACGAAGAGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GQCTRRGAGPAGLRA*TTASKLPSVTKRSA
Trigger: CGCCGACCTCTTCGTCACTGAGGGCAACTTCGAGGCGGTGGTGCAGGCTCTGAGGCCAGCGGGCCCGGCCCCTCTGCGGGTGCACTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp GGGCACCGGGAACTCAATGCAGCGCAGCTCGGGGAGCTCACAGAGTaGGGTGAAGAGGCGCCGGAGGGCGCGGGCCGACAGCGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: GHRELNAAQLGELTE*GEEAPEGAGRQRVP
Trigger: GGGAACCCGCTGTCGGCCCGCGCCCTCCGGCGCCTCTTCACCGCACTCTGTGAGCTCCCCGAGCTGCGCTGCATTGAGTTCCCGGTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp GCCTCCAGGCAGGCCCTGCAGGTTCTGTCGCGCAGGTCCTGGGGGTaGTCGGCACCAGGACCCAGCAGCGCTCCCAGCCGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASRQALQVLSRRSWG*SAPGPSSAPSRNSS
Trigger: GGAGGAGTTCCGGCTGGGAGCGCTGCTGGGTCCTGGTGCCGACCACCCCCAGGACCTGCGCGACAGAACCTGCAGGGCCTGCCTGGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp ACCAGCGCCTCCAGGCAGGCCCTGCAGGTTCTGTCGCGCAGGTCCTaGGGGTGGTCGGCACCAGGACCCAGCAGCGCTCCCAGCCGGAAC +
Preference number: 5 (lower is better)
Translates to: TSASRQALQVLSRRS*GWSAPGPSSAPSRN
Trigger: GTTCCGGCTGGGAGCGCTGCTGGGTCCTGGTGCCGACCACCCCCAGGACCTGCGCGACAGAACCTGCAGGGCCTGCCTGGAGGCGCTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp CCGGGAACTCAATGCAGCGCAGCTCGGGGAGCTCACAGAGTGCGGTaGAGAGGCGCCGGAGGGCGCGGGCCGACAGCGGGTTCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: PGTQCSAARGAHRVR*RGAGGRGPTAGSRG
Trigger: TCCTCGGGAACCCGCTGTCGGCCCGCGCCCTCCGGCGCCTCTTCACCGCACTCTGTGAGCTCCCCGAGCTGCGCTGCATTGAGTTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp GCACGTGGCCCGCATGCAGCCGCACGTTGTGCACCACCTCCAGCTTaGGCAGGGCACCCGGGCCAGCCAGACGCAGCACGTGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: ARGPHAAARCAPPPA*AGHPGQPDAARAGA
Trigger: AGCTCCTGCACGTGCTGCGTCTGGCTGGCCCGGGTGCCCTGCGCAAGCTGGAGGTGGTGCACAACGTGCGGCTGCATGCGGGCCACGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp CGGGGGAAGCCCACCTGGGCCAGAAGCTGCTGCACGTGGCCCGCATaGAGCCGCACGTTGTGCACCACCTCCAGCTTGCGCAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: RGKPTWARSCCTWPA*SRTLCTTSSLRRAP
Trigger: GGGTGCCCTGCGCAAGCTGGAGGTGGTGCACAACGTGCGGCTGCATGCGGGCCACGTGCAGCAGCTTCTGGCCCAGGTGGGCTTCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GGCGCGGTCGGGCAAAGGCCTCCCCGCAGCGCTGACCGCCCTGGTCCAGGCGGCATGTGTCTTAGGTGGTaGTCAGCTCCTCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: GAVGQRPPRSADRPGPGGMCLRW*SAPPGA
Trigger: AGCCCCTGGAGGAGCTGACAACCACCTAAGACACAT...GCCGCCTGGACCAGGGCGGTCAGCGCTGCGGGGAGGCCTTTGCCCGACCGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp AACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGTGCACCACCTCCAGCTaGCGCAGGGCACCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: NSNQKPRVPCRPTSSRKRCTTSS*RRAPGP
Trigger: TGGCCCGGGTGCCCTGCGCAAGCTGGAGGTGGTGCA...CCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp AGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGGGTTCCCGAGGAACTaGAGCTGGCGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: SNQKPRVPCRPTSSRKRQGFPRN*SWRSRW
Trigger: CCACCGGCTGCGCCAGCTCAAGTTCCTCGGGAACCC...CTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCCCCTGTCACTGTCTCTaGGTGGCTTCCCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLPCHCL*VASPAS
Trigger: GGAGGCGGGGGAAGCCACCAAGAGACAGTGACAGGG...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp CCAGCTCGTCCTGTGGGTAGGCGGCACCCTCGGGGTAGCAGTCCTTaGGCACCGGGAACTCAATGCAGCGCAGCTCGGGGAGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: PARPVGRRHPRGSSP*APGTQCSAARGAHR
Trigger: TCTGTGAGCTCCCCGAGCTGCGCTGCATTGAGTTCCCGGTGCCCAAGGACTGCTACCCCGAGGGTGCCGCCTACCCACAGGACGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp GCACCGCGCGCGTCACCTCCGCCTGCTCCAGCAGGTAGCTGGCTTTaGACAGGAGTGGGTAGAGGTTGTGGGCCACGCTGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: APRASPPPAPAGSWL*TGVGRGCGPRCPGS
Trigger: AGAGCCTGGACAGCGTGGCCCACAACCTCTACCCACTCCTGTTCAAAGCCAGCTACCTGCTGGAGCAGGCGGAGGTGACGCGCGCGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp ATCTTCCCGGTCAGCGTGGAGAAGGCCACACTGAGCTCAGTGAGCTaGGCCATCTTGCTGAGCTCCCGGGCGATGGAGGCGAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: IFPVSVEKATLSSVS*AILLSSRAMEARRG
Trigger: CCCCCTCCTCGCCTCCATCGCCCGGGAGCTCAGCAAGATGGCGCAGCTCACTGAGCTCAGTGTGGCCTTCTCCACGCTGACCGGGAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp AGGTGGGCAGCGTGGGCACAGTCTGCCAAGAAGGCCATGTCCGTGTaGTTCAGGGCACAGTTGGCCAGGTCCAGTACTCGCAGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: RWAAWAQSAKKAMSV*FRAQLARSSTRSGV
Trigger: GACCCCGCTGCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGGCAGACTGTGCCCACGCTGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp CGCAGCCGGTGGCAGGGGCTCAGGCCCAGGATCAGCATGCCAACGTaGCTGTCTACGATGCCACACTCCTCCAGTGTCAGGATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RSRWQGLRPRISMPT*LSTMPHSSSVRILS
Trigger: GCTGAGGATCCTGACACTGGAGGAGTGTGGCATCGTAGACAGCCACGTTGGCATGCTGATCCTGGGCCTGAGCCCCTGCCACCGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp TCCACTGAGGTCCAGCACCTCCAGGTGGGCAGCGTGGGCACAGTCTaGCAAGAAGGCCATGTCCGTGTGGTTCAGGGCACAGTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: STEVQHLQVGSVGTV*QEGHVRVVQGTVGQ
Trigger: CTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGGCAGACTGTGCCCACGCTGCCCACCTGGAGGTGCTGGACCTCAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp AACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGTGGTTCAGGGCACAGTaGGCCAGGTCCAGTACTCGC +
Preference number: 5 (lower is better)
Translates to: NSNQKPRVPCRPTSSRKRWFRAQ*ARSSTR
Trigger: GCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCA...CCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp TCTGCCGGGCCACCTGGGGGTGGGACACCAGAGCTTCTGCAGAAATaGAGCGGAGTGACCTCATTGTGTCCATGGCCCGAGACAGGACCG +
Preference number: 5 (lower is better)
Translates to: SAGPPGGGTPELLQK*SGVTSLCPWPETGP
Trigger: CGGTCCTGTCTCGGGCCATGGACACAATGAGGTCACTCCGCTTCATTTCTGCAGAAGCTCTGGTGTCCCACCCCCAGGTGGCCCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp GCACGGCACGCAGCTCCTCGGCGATCTCGTCGTATTTCTGCTGGTTaGACTTGGACATGGCCAGCTCGTCCTGTGGGTAGGCGGCACCCT +
Preference number: 5 (lower is better)
Translates to: ARHAAPRRSRRISAG*TWTWPARPVGRRHP
Trigger: AGGGTGCCGCCTACCCACAGGACGAGCTGGCCATGTCCAAGTTCAACCAGCAGAAATACGACGAGATCGCCGAGGAGCTGCGTGCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp AGGGGCTCAGGCCCAGGATCAGCATGCCAACGTGGCTGTCTACGATaGCACACTCCTCCAGTGTCAGGATCCTCAGCGTCCGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: RGSGPGSACQRGCLR*HTPPVSGSSASGKP
Trigger: AGGCTTCCCGGACGCTGAGGATCCTGACACTGGAGGAGTGTGGCATCGTAGACAGCCACGTTGGCATGCTGATCCTGGGCCTGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp CACAGTCTGCCAAGAAGGCCATGTCCGTGTGGTTCAGGGCACAGTTaGCCAGGTCCAGTACTCGCAGCGGGGTCTGTAGGGGGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HSLPRRPCPCGSGHS*PGPVLAAGSVGGQA
Trigger: TGCTTGGCCCCCTACAGACCCCGCTGCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGGCAGACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp ACCAGGTTGTGTCCACTGAGGTCCAGCACCTCCAGGTGGGCAGCGTaGGCACAGTCTGCCAAGAAGGCCATGTCCGTGTGGTTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TRLCPLRSSTSRWAA*AQSAKKAMSVWFRA
Trigger: TGCCCTGAACCACACGGACATGGCCTTCTTGGCAGACTGTGCCCACGCTGCCCACCTGGAGGTGCTGGACCTCAGTGGACACAACCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp ATGCCACACTCCTCCAGTGTCAGGATCCTCAGCGTCCGGGAAGCCTaGCTGAGCAGCCTGAAGAAGGTCGAGGGGTACAGGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: MPHSSSVRILSVREA*LSSLKKVEGYRLTR
Trigger: CCTGGTCAGCCTGTACCCCTCGACCTTCTTCAGGCTGCTCAGCCAGGCTTCCCGGACGCTGAGGATCCTGACACTGGAGGAGTGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp CACCTGGGGGTGGGACACCAGAGCTTCTGCAGAAATGAAGCGGAGTaGCCTCATTGTGTCCATGGCCCGAGACAGGACCGCTCCCCACGA +
Preference number: 5 (lower is better)
Translates to: HLGVGHQSFCRNEAE*PHCVHGPRQDRSPR
Trigger: TCGTGGGGAGCGGTCCTGTCTCGGGCCATGGACACAATGAGGTCACTCCGCTTCATTTCTGCAGAAGCTCTGGTGTCCCACCCCCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp ATGCCGGGCCCAAGCCTCAGATCCAGGACTAAAGCCCGGGGCACCTaGAGGCTGAAATGCAAGACCTGTCACTGGTGCGAGTGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: MPGPSLRSRTKARGT*RLKCKTCHWCEWRN
Trigger: GTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTTAGTCCTGGATCTGAGGCTTGGGCCCGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp GTCGTATTTCTGCTGGTTGAACTTGGACATGGCCAGCTCGTCCTGTaGGTAGGCGGCACCCTCGGGGTAGCAGTCCTTGGGCACCGGGAA +
Preference number: 5 (lower is better)
Translates to: VVFLLVELGHGQLVL*VGGTLGVAVLGHRE
Trigger: TTCCCGGTGCCCAAGGACTGCTACCCCGAGGGTGCCGCCTACCCACAGGACGAGCTGGCCATGTCCAAGTTCAACCAGCAGAAATACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp CGTGCTGCCACTAAAGGGCACCGCATGGCACCTCTCCTGGAAGGCTTCCTCTTCACCACCGCCTCGAAGTaGCCCTCAGTGACGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RAATKGHRMAPLLEGFLFTTASK*PSVTKR
Trigger: CCTCTTCGTCACTGAGGGCAACTTCGAGGCGGTGGT...GAAGAGGAAGCCTTCCAGGAGAGGTGCCATGCGGTGCCCTTTAGTGGCAGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCGGCAGGTCGTATTTCTGCTGGTaGAACTTGGACATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ATRSPAFPAGPPHPVSGRSYFCW*NLDMAS
Trigger: GCTGGCCATGTCCAAGTTCAACCAGCAGAAATACGA...CCTGCCGCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp TGGTCCAGGCGGCTCTTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCGCCTCTTTTTCTCGGTaGTTTTTCATGGGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: WSRRLFSGRLCSPTRMPLASFSR*FFMGCL
Trigger: TAAGCAGCCCATGAAAAACAACCGAGAAAAAGAGGC...GAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAAGAGCCGCCTGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp GCCCAAGCCTCAGATCCAGGACTAAAGCCCGGGGCACCTGCAGGCTaGAATGCAAGACCTGTCACTGGTGCGAGTGGAGGAACTACTCTA +
Preference number: 5 (lower is better)
Translates to: AQASDPGLKPGAPAG*NARPVTGASGGTTL
Trigger: TAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTTAGTCCTGGATCTGAGGCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTGAGAGGTGTGGAGACTaGGATGTCCTCTCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: GASCWRKQGPVCCSFFASERCGD*DVLSVS
Trigger: GCTGACCGAGAGGACATCCAAGTCTCCACACCTCTC...AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp CGGAATAGCTCCCGTCAGTCTAAGCCTCAAGCCCCGCAGGACACAGTGAATGTTAGCGGAGTGACCTCATaGTGTCCATGGCCCGAGACA +
Preference number: 5 (lower is better)
Translates to: RNSSRQSKPQAPQDTVNVSGVTS*CPWPET
Trigger: TGTCTCGGGCCATGGACACAATGAGGTCACTCCGCT...AACATTCACTGTGTCCTGCGGGGCTTGAGGCTTAGACTGACGGGAGCTATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp TTCAGCGGACGCCTGTGCTCACCCACTCGGATGCCCCTCACGGTTCTGGGGGCTCTCATTGCTTGTTTCTaGAATGTCTGGGTCAAAACT +
Preference number: 5 (lower is better)
Translates to: FSGRLCSPTRMPLTVLGALIACF*NVWVKT
Trigger: AGTTTTGACCCAGACATTCAAGAAACAAGCAATGAG...AGCCCCCAGAACCGTGAGGGGCATCCGAGTGGGTGAGCACAGGCGTCCGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp CTAACAGCAACCAGAAGCCCCGCGTTCCCTGCAGGCCCACCTCATCCCGTAAGCCATGGGCTGCTTATTTaGTGCAGTTTCTGTGATGTG +
Preference number: 5 (lower is better)
Translates to: LTATRSPAFPAGPPHPVSHGLLI*CSFCDV
Trigger: CACATCACAGAAACTGCACAAAATAAGCAGCCCATG...GCTTACGGGATGAGGTGGGCCTGCAGGGAACGCGGGGCTTCTGGTTGCTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp TCTGCTCTTTGCCATGTGGCGTCTGCCCCCGCTGACCCTGTCACTGTCTCTTGGTGCACAAAGTCACTCTaGGTGGACACCAAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SALCHVASAPADPVTVSWCTKSL*VDTKSK
Trigger: TTTGGACTTGGTGTCCACCAAGAGTGACTTTGTGCA...CCAAGAGACAGTGACAGGGTCAGCGGGGGCAGACGCCACATGGCAAAGAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp AGCCTCAGATCCAGGACTAAAGCCCGGGGCACCTGCAGGCTGAAATaGAAGACCTGTCACTGGTGCGAGTGGAGGAACTACTCTATTTGT +
Preference number: 5 (lower is better)
Translates to: SLRSRTKARGTCRLK*KTCHWCEWRNYSIC
Trigger: ACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTTAGTCCTGGATCTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 90 bp AAAGCCCGGGGCACCTGCAGGCTGAAATGCAAGACCTGTCACTGGTaGGAGTGGAGGAACTACTCTATTTGTTTGAGTGCTCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KARGTCRLKCKTCHW*EWRNYSICLSALEK
Trigger: CTTCTCCAGAGCACTCAAACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp TGCTTGTTTCTTGAATGTCTGGGTCAAAACTTCCAAAGAGAGGTGTaGAGACTTGGATGTCCTCTCGGTCAGCCCGCAGCAGCACGGCAC +
Preference number: 5 (lower is better)
Translates to: CLFLECLGQNFQREV*RLGCPLGQPAAARH
Trigger: GTGCCGTGCTGCTGCGGGCTGACCGAGAGGACATCCAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGACATTCAAGAAACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp ACTAAAGCCCGGGGCACCTGCAGGCTGAAATGCAAGACCTGTCACTaGTGCGAGTGGAGGAACTACTCTATTTGTTTGAGTGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: TKARGTCRLKCKTCH*CEWRNYSICLSALE
Trigger: CTCCAGAGCACTCAAACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCGGGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTTGGTGCATCAAAGGCCTaGGTGGGCAGGGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: GSRVRFAVHFSPLFLGCFGASKA*VGRVSE
Trigger: CTCGCTCACCCTGCCCACCAAGGCCTTTGATGCACC...AAAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCGTGAGCTGCGCCATCTaGCTGAGCTCCCGGGCGATG +
Preference number: 5 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTVSCAI*LSSRAM
Trigger: CATCGCCCGGGAGCTCAGCAAGATGGCGCAGCTCAC...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GTCAGCTCCTCCAGGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAAGAAGCAGGGTCCGGTTaGCTGTTCATTTTTCGCCTC +
Preference number: 5 (lower is better)
Translates to: VSSSRGWSSARPSIKHPEEAGSG*LFIFRL
Trigger: GAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTC...TTCCGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCCTGGAGGAGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GGAGCCTCCTGCTGGAGGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTGCTCAGCCATTTCTTaGCACAAAGTCACTCTTGGT +
Preference number: 5 (lower is better)
Translates to: GASCWRKQGPVCCSFFASCSAIS*HKVTLG
Trigger: ACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCA...AGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCCTCCAGCAGGAGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp CGGGGCACCTGCAGGCTGAAATGCAAGACCTGTCACTGGTGCGAGTaGAGGAACTACTCTATTTGTTTGAGTGCTCTGGAGAAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: RGTCRLKCKTCHWCE*RNYSICLSALEKFS
Trigger: AGAAAACTTCTCCAGAGCACTCAAACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GGGGCTGGTCAAGTGCTAGACCTTCAATTAAACACCCGGAATAGCTCCCGTCAGAACTACTCTATTTGTTaGAGTGCTCTGGAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: GAGQVLDLQLNTRNSSRQNYSIC*SALEKF
Trigger: AAACTTCTCCAGAGCACTCAAACAAATAGAGTAGTT...CTGACGGGAGCTATTCCGGGTGTTTAATTGAAGGTCTAGCACTTGACCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 90 bp TTGCAGCAAGAAAGCACCAAGCTCATTGCTTGTTTCTTGAATGTCTaGGTCAAAACTTCCAAAGAGAGGTGTGGAGACTTGGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: LQQESTKLIACFLNV*VKTSKERCGDLDVL
Trigger: GAGGACATCCAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGACATTCAAGAAACAAGCAATGAGCTTGGTGCTTTCTTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 90 bp TTGAAAGCTTGCAGCAAGAAAGCACCAAGCTCATTGCTTGTTTCTTaGATGTCTGGGTCAAAACTTCCAAAGAGAGGTGTGGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: LKACSKKAPSSLLVS*MSGSKLPKRGVETW
Trigger: CCAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGACATTCAAGAAACAAGCAATGAGCTTGGTGCTTTCTTGCTGCAAGCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp GGAAGCAGGGTCCGGTTTGCTGTTCATTTTTCGCCTCTTTTTCTCGGTTGTTTTGAGGAACTACTCTATTaGTTTGAGTGCTCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: GSRVRFAVHFSPLFLGCFEELLY*FECSGE
Trigger: TTCTCCAGAGCACTCAAACAAATAGAGTAGTTCCTC...AAAACAACCGAGAAAAAGAGGCGAAAAATGAACAGCAAACCGGACCCTGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS-3UTR CAA 90 bp AGTTATTCTAGTGCTCAGCCATTTCTTTGCACAAAGTCACTCTTGGTGGACACCTTTTCTAGAGCAGTTTaGAAAGCTTGCAGCAAGAAA +
Preference number: 5 (lower is better)
Translates to: SYSSAQPFLCTKSLLVDTFSRAV*KACSKK
Trigger: TTTCTTGCTGCAAGCTTTCAAAACTGCTCTAGAAAA...GGTGTCCACCAAGAGTGACTTTGTGCAAAGAAATGGCTGAGCACTAGAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp CCGCGAGGCCGCGCACCAGCGCCTCCAGGCAGGCCCTaGAGGTTCTGTCGCGCAGGTCCTGGGGGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: PRGRAPAPPGRP*RFCRAGPGGGR
Trigger: CCGACCACCCCCAGGACCTGCGCGACAGAACCTGCAGGGCCTGCCTGGAGGCGCTGGTGCGCGGCCTCGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 72 bp CGGAGGGCGCGGGCCGACAGCGGGTTCCCGAGGAACTaGAGCTGGCGCAGCCGGTGGCAGGGGCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RRARADSGFPRN*SWRSRWQGLRP
Trigger: GGGCCTGAGCCCCTGCCACCGGCTGCGCCAGCTCAAGTTCCTCGGGAACCCGCTGTCGGCCCGCGCCCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp CTGCCCAGCGCCCTCCCGCACGGGCACCGCTGCACCTaGACATCTCGGATGCCCGTGAGGTCAGCCACCCGC +
Preference number: 6 (lower is better)
Translates to: LPSALPHGHRCT*TSRMPVRSATR
Trigger: GCGGGTGGCTGACCTCACGGGCATCCGAGATGTGCAGGTGCAGCGGTGCCCGTGCGGGAGGGCGCTGGGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp CCCCACCTGCCCAGCGCCCTCCCGCACGGGCACCGCTaGACCTGCACATCTCGGATGCCCGTGAGGTCAGCC +
Preference number: 6 (lower is better)
Translates to: PHLPSALPHGHR*TCTSRMPVRSA
Trigger: GGCTGACCTCACGGGCATCCGAGATGTGCAGGTGCAGCGGTGCCCGTGCGGGAGGGCGCTGGGCAGGTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CTGCGAGGGGCTCTGCCTGCAGCTCACAGCAGGTCCTaGCCAGCAGCTGGGTGCGGCCCCACCTGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: LRGALPAAHSRS*PAAGCGPTCPA
Trigger: CGCTGGGCAGGTGGGGCCGCACCCAGCTGCTGGCCAGGACCTGCTGTGAGCTGCAGGCAGAGCCCCTCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp GGCAGGGTGAGCGAGGCCAGCCGGGGGAAGCCCACCTaGGCCAGAAGCTGCTGCACGTGGCCCGCATGCAGC +
Preference number: 6 (lower is better)
Translates to: GRVSEASRGKPT*ARSCCTWPACS
Trigger: GCTGCATGCGGGCCACGTGCAGCAGCTTCTGGCCCAGGTGGGCTTCCCCCGGCTGGCCTCGCTCACCCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp GCGCGGGCCGACAGCGGGTTCCCGAGGAACTTGAGCTaGCGCAGCCGGTGGCAGGGGCTCAGGCCCAGGATC +
Preference number: 6 (lower is better)
Translates to: ARADSGFPRNLS*RSRWQGLRPRI
Trigger: GATCCTGGGCCTGAGCCCCTGCCACCGGCTGCGCCAGCTCAAGTTCCTCGGGAACCCGCTGTCGGCCCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 90 bp GGGGCCGGGCCCGCTGGCCTCAGAGCCTGCACCACCGCCTCGAAGTaGCCCTCAGTGACGAAGAGGTCGGCGAGGACCTCGACGGGGCGC +
Preference number: 6 (lower is better)
Translates to: GAGPAGLRACTTASK*PSVTKRSARTSTGR
Trigger: GCGCCCCGTCGAGGTCCTCGCCGACCTCTTCGTCACTGAGGGCAACTTCGAGGCGGTGGTGCAGGCTCTGAGGCCAGCGGGCCCGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 72 bp CAATGCAGCGCAGCTCGGGGAGCTCACAGAGTGCGGTaGAGAGGCGCCGGAGGGCGCGGGCCGACAGCGGGT +
Preference number: 6 (lower is better)
Translates to: QCSAARGAHRVR*RGAGGRGPTAG
Trigger: ACCCGCTGTCGGCCCGCGCCCTCCGGCGCCTCTTCACCGCACTCTGTGAGCTCCCCGAGCTGCGCTGCATTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp TCCAGGCAGGCCCTGCAGGTTCTGTCGCGCAGGTCCTaGGGGTGGTCGGCACCAGGACCCAGCAGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: SRQALQVLSRRS*GWSAPGPSSAP
Trigger: GGGAGCGCTGCTGGGTCCTGGTGCCGACCACCCCCAGGACCTGCGCGACAGAACCTGCAGGGCCTGCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp AGCTGCTGCACGTGGCCCGCATGCAGCCGCACGTTGTaGACCACCTCCAGCTTGCGCAGGGCACCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: SCCTWPACSRTL*TTSSLRRAPGP
Trigger: TGGCCCGGGTGCCCTGCGCAAGCTGGAGGTGGTGCACAACGTGCGGCTGCATGCGGGCCACGTGCAGCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CGGGGGAAGCCCACCTGGGCCAGAAGCTGCTGCACGTaGCCCGCATGCAGCCGCACGTTGTGCACCACCTCC +
Preference number: 6 (lower is better)
Translates to: RGKPTWARSCCT*PACSRTLCTTS
Trigger: GGAGGTGGTGCACAACGTGCGGCTGCATGCGGGCCACGTGCAGCAGCTTCTGGCCCAGGTGGGCTTCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp CCCACCTGGGCCAGAAGCTGCTGCACGTGGCCCGCATaGAGCCGCACGTTGTGCACCACCTCCAGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: PTWARSCCTWPA*SRTLCTTSSLR
Trigger: GCGCAAGCTGGAGGTGGTGCACAACGTGCGGCTGCATGCGGGCCACGTGCAGCAGCTTCTGGCCCAGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp GAACTCAATGCAGCGCAGCTCGGGGAGCTCACAGAGTaGGGTGAAGAGGCGCCGGAGGGCGCGGGCCGACAG +
Preference number: 6 (lower is better)
Translates to: ELNAAQLGELTE*GEEAPEGAGRQ
Trigger: CTGTCGGCCCGCGCCCTCCGGCGCCTCTTCACCGCACTCTGTGAGCTCCCCGAGCTGCGCTGCATTGAGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 90 bp GTCAGCGTGGAGAAGGCCACACTGAGCTCAGTGAGCTGCGCCATCTaGCTGAGCTCCCGGGCGATGGAGGCGAGGAGGGGGTCCTCGCCG +
Preference number: 6 (lower is better)
Translates to: VSVEKATLSSVSCAI*LSSRAMEARRGSSP
Trigger: CGGCGAGGACCCCCTCCTCGCCTCCATCGCCCGGGAGCTCAGCAAGATGGCGCAGCTCACTGAGCTCAGTGTGGCCTTCTCCACGCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CCTGTGGGTAGGCGGCACCCTCGGGGTAGCAGTCCTTaGGCACCGGGAACTCAATGCAGCGCAGCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: PVGRRHPRGSSP*APGTQCSAARG
Trigger: TCCCCGAGCTGCGCTGCATTGAGTTCCCGGTGCCCAAGGACTGCTACCCCGAGGGTGCCGCCTACCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 72 bp CCCGCTGGCCTCAGAGCCTGCACCACCGCCTCGAAGTaGCCCTCAGTGACGAAGAGGTCGGCGAGGACCTCG +
Preference number: 6 (lower is better)
Translates to: PAGLRACTTASK*PSVTKRSARTS
Trigger: CGAGGTCCTCGCCGACCTCTTCGTCACTGAGGGCAACTTCGAGGCGGTGGTGCAGGCTCTGAGGCCAGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 72 bp GAGAAGGCCACACTGAGCTCAGTGAGCTGCGCCATCTaGCTGAGCTCCCGGGCGATGGAGGCGAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: EKATLSSVSCAI*LSSRAMEARRG
Trigger: CCCCCTCCTCGCCTCCATCGCCCGGGAGCTCAGCAAGATGGCGCAGCTCACTGAGCTCAGTGTGGCCTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp GCAGCCGGTGGCAGGGGCTCAGGCCCAGGATCAGCATaGCAACGTGGCTGTCTACGATGCCACACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: AAGGRGSGPGSA*QRGCLRCHTPP
Trigger: TGGAGGAGTGTGGCATCGTAGACAGCCACGTTGGCATGCTGATCCTGGGCCTGAGCCCCTGCCACCGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp TGTCCACTGAGGTCCAGCACCTCCAGGTGGGCAGCGTaGGCACAGTCTGCCAAGAAGGCCATGTCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: CPLRSSTSRWAA*AQSAKKAMSVW
Trigger: CCACACGGACATGGCCTTCTTGGCAGACTGTGCCCACGCTGCCCACCTGGAGGTGCTGGACCTCAGTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CTGCTGGTTGAACTTGGACATGGCCAGCTCGTCCTGTaGGTAGGCGGCACCCTCGGGGTAGCAGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: LLVELGHGQLVL*VGGTLGVAVLG
Trigger: CCCAAGGACTGCTACCCCGAGGGTGCCGCCTACCCACAGGACGAGCTGGCCATGTCCAAGTTCAACCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 90 bp GCACAGTCTGCCAAGAAGGCCATGTCCGTGTGGTTCAGGGCACAGTaGGCCAGGTCCAGTACTCGCAGCGGGGTCTGTAGGGGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: AQSAKKAMSVWFRAQ*ARSSTRSGVCRGPS
Trigger: GCTTGGCCCCCTACAGACCCCGCTGCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGGCAGACTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 72 bp GCGTCACCTCCGCCTGCTCCAGCAGGTAGCTGGCTTTaGACAGGAGTGGGTAGAGGTTGTGGGCCACGCTGT +
Preference number: 6 (lower is better)
Translates to: ASPPPAPAGSWL*TGVGRGCGPRC
Trigger: ACAGCGTGGCCCACAACCTCTACCCACTCCTGTTCAAAGCCAGCTACCTGCTGGAGCAGGCGGAGGTGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CCAAGAAGGCCATGTCCGTGTGGTTCAGGGCACAGTTaGCCAGGTCCAGTACTCGCAGCGGGGTCTGTAGGG +
Preference number: 6 (lower is better)
Translates to: PRRPCPCGSGHS*PGPVLAAGSVG
Trigger: CCCTACAGACCCCGCTGCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp GCGTGGGCACAGTCTGCCAAGAAGGCCATGTCCGTGTaGTTCAGGGCACAGTTGGCCAGGTCCAGTACTCGC +
Preference number: 6 (lower is better)
Translates to: AWAQSAKKAMSV*FRAQLARSSTR
Trigger: GCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGGCAGACTGTGCCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp TCCTCCAGTGTCAGGATCCTCAGCGTCCGGGAAGCCTaGCTGAGCAGCCTGAAGAAGGTCGAGGGGTACAGG +
Preference number: 6 (lower is better)
Translates to: SSSVRILSVREA*LSSLKKVEGYR
Trigger: CCTGTACCCCTCGACCTTCTTCAGGCTGCTCAGCCAGGCTTCCCGGACGCTGAGGATCCTGACACTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp TGGCAGGGGCTCAGGCCCAGGATCAGCATGCCAACGTaGCTGTCTACGATGCCACACTCCTCCAGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: WQGLRPRISMPT*LSTMPHSSSVR
Trigger: CCTGACACTGGAGGAGTGTGGCATCGTAGACAGCCACGTTGGCATGCTGATCCTGGGCCTGAGCCCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 72 bp GCCAAGAAGGCCATGTCCGTGTGGTTCAGGGCACAGTaGGCCAGGTCCAGTACTCGCAGCGGGGTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: AKKAMSVWFRAQ*ARSSTRSGVCR
Trigger: CCTACAGACCCCGCTGCGAGTACTGGACCTGGCCAACTGTGCCCTGAACCACACGGACATGGCCTTCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp GGCCCAGGATCAGCATGCCAACGTGGCTGTCTACGATaGCACACTCCTCCAGTGTCAGGATCCTCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: GPGSACQRGCLR*HTPPVSGSSAS
Trigger: GGACGCTGAGGATCCTGACACTGGAGGAGTGTGGCATCGTAGACAGCCACGTTGGCATGCTGATCCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 72 bp CCACCTGGGGGTGGGACACCAGAGCTTCTGCAGAAATaGAGCGGAGTGACCTCATTGTGTCCATGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: PPGGGTPELLQK*SGVTSLCPWPE
Trigger: CTCGGGCCATGGACACAATGAGGTCACTCCGCTTCATTTCTGCAGAAGCTCTGGTGTCCCACCCCCAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp GCACGCAGCTCCTCGGCGATCTCGTCGTATTTCTGCTaGTTGAACTTGGACATGGCCAGCTCGTCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: ARSSSAISSYFC*LNLDMASSSCG
Trigger: CCCACAGGACGAGCTGGCCATGTCCAAGTTCAACCAGCAGAAATACGACGAGATCGCCGAGGAGCTGCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 72 bp GTGGGACACCAGAGCTTCTGCAGAAATGAAGCGGAGTaGCCTCATTGTGTCCATGGCCCGAGACAGGACCGC +
Preference number: 6 (lower is better)
Translates to: VGHQSFCRNEAE*PHCVHGPRQDR
Trigger: GCGGTCCTGTCTCGGGCCATGGACACAATGAGGTCACTCCGCTTCATTTCTGCAGAAGCTCTGGTGTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS TCA 72 bp GCAGCTCCTCGGCGATCTCGTCGTATTTCTGCTGGTTaGACTTGGACATGGCCAGCTCGTCCTGTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: AAPRRSRRISAG*TWTWPARPVGR
Trigger: CCTACCCACAGGACGAGCTGGCCATGTCCAAGTTCAACCAGCAGAAATACGACGAGATCGCCGAGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp ACGGCACGCAGCTCCTCGGCGATCTCGTCGTATTTCTaGTGGTTGAACTTGGACATGGCCAGCTCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: TARSSSAISSYF*WLNLDMASSSC
Trigger: ACAGGACGAGCTGGCCATGTCCAAGTTCAACCAGCAGAAATACGACGAGATCGCCGAGGAGCTGCGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 72 bp GTCTGGGTCAAAACTTCCAAAGAGAGGTGTGGAGACTaGGATGTCCTCTCGGTCAGCCCGCAGCAGCACGGC +
Preference number: 6 (lower is better)
Translates to: VWVKTSKERCGD*DVLSVSPQQHG
Trigger: GCCGTGCTGCTGCGGGCTGACCGAGAGGACATCCAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 90 bp TTCTTGAATGTCTGGGTCAAAACTTCCAAAGAGAGGTGTGGAGACTaGGATGTCCTCTCGGTCAGCCCGCAGCAGCACGGCACGCAGCTC +
Preference number: 6 (lower is better)
Translates to: FLNVWVKTSKERCGD*DVLSVSPQQHGTQL
Trigger: GAGCTGCGTGCCGTGCTGCTGCGGGCTGACCGAGAGGACATCCAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGACATTCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CTTGAATGTCTGGGTCAAAACTTCCAAAGAGAGGTGTaGAGACTTGGATGTCCTCTCGGTCAGCCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: LECLGQNFQREV*RLGCPLGQPAA
Trigger: TGCTGCGGGCTGACCGAGAGGACATCCAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGACATTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp CGGGGCACCTGCAGGCTGAAATGCAAGACCTGTCACTaGTGCGAGTGGAGGAACTACTCTATTTGTTTGAGT +
Preference number: 6 (lower is better)
Translates to: RGTCRLKCKTCH*CEWRNYSICLS
Trigger: ACTCAAACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS GCA 72 bp GGCACCTGCAGGCTGAAATGCAAGACCTGTCACTGGTaGGAGTGGAGGAACTACTCTATTTGTTTGAGTGCT +
Preference number: 6 (lower is better)
Translates to: GTCRLKCKTCHW*EWRNYSICLSA
Trigger: AGCACTCAAACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCAGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CCA 72 bp TGCAGGCTGAAATGCAAGACCTGTCACTGGTGCGAGTaGAGGAACTACTCTATTTGTTTGAGTGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: CRLKCKTCHWCE*RNYSICLSALE
Trigger: CTCCAGAGCACTCAAACAAATAGAGTAGTTCCTCCACTCGCACCAGTGACAGGTCTTGCATTTCAGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 90 bp TTTGAAAGCTTGCAGCAAGAAAGCACCAAGCTCATTGCTTGTTTCTaGAATGTCTGGGTCAAAACTTCCAAAGAGAGGTGTGGAGACTTG +
Preference number: 6 (lower is better)
Translates to: FESLQQESTKLIACF*NVWVKTSKERCGDL
Trigger: CAAGTCTCCACACCTCTCTTTGGAAGTTTTGACCCAGACATTCAAGAAACAAGCAATGAGCTTGGTGCTTTCTTGCTGCAAGCTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4
CDS CAA 90 bp TACTCTATTTGTTTGAGTGCTCTGGAGAAGTTTTCTAGAGCAGTTTaGAAAGCTTGCAGCAAGAAAGCACCAAGCTCATTGCTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: YSICLSALEKFSRAV*KACSKKAPSSLLVS
Trigger: AGAAACAAGCAATGAGCTTGGTGCTTTCTTGCTGCAAGCTTTCAAAACTGCTCTAGAAAACTTCTCCAGAGCACTCAAACAAATAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328278.4