RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRP2BP (Homo sapiens)

Ensembl gene IDs: ENSG00000109771

Ensembl transcript IDs: ENST00000328559.11, ENST00000505916.6, ENST00000510776.5, ENST00000511404.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTTGTCACCGAGGCTGGAGTGCAATTTGCGCGATCTCAGCTCACTaGAACCTCTGCCTCCTGGTTTCAAGCAGTTCTTCTGTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: SCHRGWSAICAISAH*NLCLLVSSSSSVSA
Trigger: GGCTGAGACAGAAGAACTGCTTGAAACCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCGCAAATTGCACTCCAGCCTCGGTGACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTAAGAGTAATGATCTGGAAGTCTCAATaGACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTT +
Preference number: 1 (lower is better)
Translates to: VCVCVCVRVMIWKSQ*TRVTDSPQSQVKGF
Trigger: AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGATCATTACTCTTACACACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR CCA 90 bp GTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTAAGAGTAATGATCTaGAAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAG +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVRVMI*KSQCTRVTDSPQSQ
Trigger: CTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGATCATTACTCTTACACACACACACACACACACACATACACACAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR TCA 90 bp TGTGGAGAAGAGAATACTAGTTGGGAATTTGGATCTTCAAGTGGTTaGAGGAATGTTACATGGGTGGTATTAAGAGATTTGAGACAGAAA +
Preference number: 1 (lower is better)
Translates to: CGEENTSWEFGSSSG*RNVTWVVLRDLRQK
Trigger: TTTCTGTCTCAAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAATTCCCAACTAGTATTCTCTTCTCCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGGGGGTTTCACCACGTTaGCCAGCCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRGVSPR*PAWSQT
Trigger: AGTTTGAGACCAGGCTGGCCAACGTGGTGAAACCCC...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGCCTCCCGAGTAGCTaGGACTACAGGCGTCCGCCA +
Preference number: 2 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGSLPSS*DYRRPP
Trigger: TGGCGGACGCCTGTAGTCCCAGCTACTCGGGAGGCT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGAAACTCCTGACCTCATaGTCTGCCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLKLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCATGAGGTCAGGAGTTT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGGGCTGGAGTGCAATTTaGGCGATCTCAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: NALELQTHRSLRSRGLLLGWSAI*AISAHC
Trigger: GCAGTGAGCTGAGATCGCGCAAATTGCACTCCAGCC...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCAGCAGTGGTAGTTTaGAGGGACTCGCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: NALELQTHRSLRSRGLLLSAVVV*RDSLVP
Trigger: TGGCACAAGCGAGTCCCTGCAAACTACCACTGCTGA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAATGGTTTTAATACTTaGTATGGTCTCGGCCAGTCT +
Preference number: 2 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGNGFNT*YGLGQS
Trigger: AGACTGGCCGAGACCATATCAAGTATTAAAACCATT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTGGATCTTCAAGTGGTTaGAGGAATGTTACATGGGTG +
Preference number: 2 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFGSSSG*RNVTWV
Trigger: CACCCATGTAACATTCCTTCAACCACTTGAAGATCC...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTGCATGTTACCATGTATaGCACACGTCAAAGTTTATG +
Preference number: 2 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGACYHV*HTSKFM
Trigger: CATAAACTTTGACGTGTGCCATACATGGTAACATGC...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTCAAACCCGAGTCTGTTaGAATTTCTTCCCTTACACA +
Preference number: 2 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFQTRVC*NFFPYT
Trigger: TGTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTG...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTTTTACTGTCACCTTTTaGCTTCATAGATGTCATCTA +
Preference number: 2 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGFTVTF*LHRCHL
Trigger: TAGATGACATCTATGAAGGCAAAAGGTGACAGTAAA...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGGGCTGGAGTGCAATTTaGGCGATCTCAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: CHFSMRYQLQGILEKECVGWSAI*AISAHC
Trigger: GCAGTGAGCTGAGATCGCGCAAATTGCACTCCAGCC...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTCAGCAGTGGTAGTTTaGAGGGACTCGCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNSAVVV*RDSLVP
Trigger: TGGCACAAGCGAGTCCCTGCAAACTACCACTGCTGA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGGAGCAAATACTTTTCTaGCATTCAACAGTTCTTAGT +
Preference number: 2 (lower is better)
Translates to: NALELQTHRSLRSRGLLLEQILF*HSTVLS
Trigger: ACTAAGAACTGTTGAATGGCAGAAAAGTATTTGCTC...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAGCGATCTCAGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 2 (lower is better)
Translates to: ISIACYHVWHTSKFMISEAISAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGC...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGCAGGGACTCGCTTGTaGCAGAGCATTAGCTTTATG +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNAGTRL*QSISFM
Trigger: CATAAAGCTAATGCTCTGGCACAAGCGAGTCCCTGC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGCAACCTCTGCCTCCTaGTTTCAAGCAGTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNATSAS*FQAVLL
Trigger: CAGAAGAACTGCTTGAAACCAGGAGGCAGAGGTTGC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAGCTCACTGCAACCTCTaGCTCCTGGTTTCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: ISIACYHVWHTSKFMISEAHCNL*LLVSSS
Trigger: ACTGCTTGAAACCAGGAGGCAGAGGTTGCAGTGAGC...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTTGGCAGTTTAAAAAGTaGTCTTTACTTAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSWQFKK*SLLRAD
Trigger: ATCGGCCCTAAGTAAAGAGCACTTTTTAAACTGCCA...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGGATCTTCAAGTGGTTaGAGGAATGTTACATGGGTG +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNGSSSG*RNVTWV
Trigger: CACCCATGTAACATTCCTTCAACCACTTGAAGATCC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGATTTGGATCTTCAAGTaGTTGAAGGAATGTTACATG +
Preference number: 2 (lower is better)
Translates to: GILEKECVCVYVCVCVCVIWIFK*LKECYM
Trigger: CATGTAACATTCCTTCAACCACTTGAAGATCCAAAT...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTTTTACTGTCACCTTTTaGCTTCATAGATGTCATCTA +
Preference number: 2 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSFTVTF*LHRCHL
Trigger: TAGATGACATCTATGAAGGCAAAAGGTGACAGTAAA...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATATCTGGAAGTCTCAATaGACTCGAGTTACAGACTCA +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNIWKSQ*TRVTDS
Trigger: TGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGAT...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGAAATACATGACCATTTaGGGATATCTCAAACCCGAG +
Preference number: 2 (lower is better)
Translates to: CHFSMRYQLQGILEKECVKYMTI*GYLKPE
Trigger: CTCGGGTTTGAGATATCCTCAAATGGTCATGTATTT...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGCATGTTACCATGTATaGCACACGTCAAAGTTTATG +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNACYHV*HTSKFM
Trigger: CATAAACTTTGACGTGTGCCATACATGGTAACATGC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGTAAGAGTAATGATCTaGAAGTCTCAATGCACTCGA +
Preference number: 2 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNVRVMI*KSQCTR
Trigger: TCGAGTGCATTGAGACTTCCAGATCATTACTCTTAC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAAATGGTTTTAATACTTaGTATGGTCTCGGCCAGTCT +
Preference number: 2 (lower is better)
Translates to: ISIACYHVWHTSKFMISENGFNT*YGLGQS
Trigger: AGACTGGCCGAGACCATATCAAGTATTAAAACCATT...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR TCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTAAATACATGACCATTTaGGGATATCTCAAACCCGAG +
Preference number: 2 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFKYMTI*GYLKPE
Trigger: CTCGGGTTTGAGATATCCTCAAATGGTCATGTATTT...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAATGGCAGTTTAAAAAGTaGTCTTTACTTAGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: ISIACYHVWHTSKFMISEWQFKK*SLLRAD
Trigger: ATCGGCCCTAAGTAAAGAGCACTTTTTAAACTGCCA...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CCA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGATTTGGATCTTCAAGTaGTTGAAGGAATGTTACATG +
Preference number: 2 (lower is better)
Translates to: CHFSMRYQLQGILEKECVIWIFK*LKECYM
Trigger: CATGTAACATTCCTTCAACCACTTGAAGATCCAAAT...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAGAGCAAATACTTTTCTaGCATTCAACAGTTCTTAGT +
Preference number: 2 (lower is better)
Translates to: ISIACYHVWHTSKFMISEEQILF*HSTVLS
Trigger: ACTAAGAACTGTTGAATGGCAGAAAAGTATTTGCTC...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTGATGGAGTCTCGCTCTaGTCACCGAGGCTGGAGTGC +
Preference number: 3 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGDGVSL*SPRLEC
Trigger: GCACTCCAGCCTCGGTGACAAGAGCGAGACTCCATC...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGTGGATCTTCAAGTGGTaGAAGGAATGTTACATGGGT +
Preference number: 3 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRWIFKW*KECYMG
Trigger: ACCCATGTAACATTCCTTCAACCACTTGAAGATCCA...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTCTCAGCAGTGGTAGTTaGCAGGGACTCGCTTGTGCC +
Preference number: 3 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSLSSGS*QGLACA
Trigger: GGCACAAGCGAGTCCCTGCAAACTACCACTGCTGAG...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGTACTCATTAAGATCTTaGAGGGAAGATTTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLYSLRS*REDLEG
Trigger: CCCCTCCAAATCTTCCCTCAAAGATCTTAATGAGTA...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGATGGAGTCTCGCTCTaGTCACCGAGGCTGGAGTGC +
Preference number: 3 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNDGVSL*SPRLEC
Trigger: GCACTCCAGCCTCGGTGACAAGAGCGAGACTCCATC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR GCA 72 bp TGTGTGTGTGTAAGAGTAATGATCTGGAAGTCTCAATaGACTCGAGTTACAGACTCACCGCAGTCTCAGGTC +
Preference number: 3 (lower is better)
Translates to: CVCVRVMIWKSQ*TRVTDSPQSQV
Trigger: GACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGATCATTACTCTTACACACACACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTGTCTAGGTTTCAAGTaGCAAAACTTAACAGCGTAC +
Preference number: 3 (lower is better)
Translates to: NALELQTHRSLRSRGLLLCLGFK*QNLTAY
Trigger: GTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR CCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTAAGAGTAATGATCTaGAAGTCTCAATGCACTCGAGTTACAGACTCACCG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVRVMI*KSQCTRVTDSP
Trigger: CGGTGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGATCATTACTCTTACACACACACACACACACACACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTACTCATTAAGATCTTaGAGGGAAGATTTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: GILEKECVCVYVCVCVCVYSLRS*REDLEG
Trigger: CCCCTCCAAATCTTCCCTCAAAGATCTTAATGAGTA...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGTCCAGCAATTTGACCTaGTGTCTAGGTTTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: CHFSMRYQLQGILEKECVSSNLT*CLGFKL
Trigger: CAACTTGAAACCTAGACACAAGGTCAAATTGCTGGA...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTTCCAGCAATTTGACCTaGTGTCTAGGTTTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: QTSQNIKREQILFCHSTVSSNLT*CLGFKL
Trigger: CAACTTGAAACCTAGACACAAGGTCAAATTGCTGGA...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGTCAAACCCGAGTCTGTaGAAATTTCTTCCCTTACAC +
Preference number: 3 (lower is better)
Translates to: CHFSMRYQLQGILEKECVSNPSL*KFLPLH
Trigger: GTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTGA...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTGGATCTTCAAGTGGTaGAAGGAATGTTACATGGGT +
Preference number: 3 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNWIFKW*KECYMG
Trigger: ACCCATGTAACATTCCTTCAACCACTTGAAGATCCA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAATCAAACCCGAGTCTGTaGAAATTTCTTCCCTTACAC +
Preference number: 3 (lower is better)
Translates to: ISIACYHVWHTSKFMISESNPSL*KFLPLH
Trigger: GTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTGA...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR-3UTR CAA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGATACTAGTTGGGAATTaGGATCTTCAAGTGGTTGAA +
Preference number: 3 (lower is better)
Translates to: CHFSMRYQLQGILEKECVILVGN*DLQVVE
Trigger: TTCAACCACTTGAAGATCCAAATTCCCAACTAGTAT...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCTGACCCTTGGAGTATaGGCAGGGCCGAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRLTLGV*AGPRWG
Trigger: CCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGATGGGAGCTGACCCTTaGAGTATGGGCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRMGADP*SMGRAE
Trigger: CTCGGCCCTGCCCATACTCCAAGGGTCAGCTCCCAT...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCTTAGTGGGACCTGGTaGCACTGCCCACAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRLSGTW*HCPQSE
Trigger: CTCTGACTGTGGGCAGTGTCACCAGGTCCCACTAAG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR TCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCTTGGGCTCCTTGGTTaGGTAATACAGCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRLGLLG*VIQPEH
Trigger: ATGCTCGGGCTGTATTACTCAACCAAGGAGCCCAAG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCTGCTACACGCCTGGTaGAACTCCAGTTACTTGCCA +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRLLHAW*NSSYLP
Trigger: TGGCAAGTAACTGGAGTTTCACCAGGCGTGTAGCAG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR TCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGTTGTTTCATCCCTGGTaGTGCCCAAGCCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRLFHPW*CPSQAE
Trigger: TTCAGCTTGGCTTGGGCATCACCAGGGATGAAACAA...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTGGGCAGGGCCGAGATaGGGGAGCGGAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLWAGPR*GSGKRR
Trigger: CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGTTTCTGAAAACAATGTaGGCAATGGACAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRFLKTM*AMDRYA
Trigger: AGCGTACCTGTCCATTGCTCACATTGTTTTCAGAAA...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCCTTTTCTAACTCCTTaGGCTCCTTGGTTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRPFLTP*APWLSN
Trigger: ATTACTCAACCAAGGAGCCCAAGGAGTTAGAAAAGG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGTTCAGCTTCCTCATTTaGTCGTTTAACACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRFSFLI*SFNTFS
Trigger: GGAAAAGGTGTTAAACGATCAAATGAGGAAGCTGAA...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTTGCGTGGTAGAAGGATaGCATTGCCATGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGCVVEG*HCHASA
Trigger: GGCAGAGGCATGGCAATGGCATCCTTCTACCACGCA...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGTGCGTGGTAGAAGGATaGCATTGCCATGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLCVVEG*HCHASA
Trigger: GGCAGAGGCATGGCAATGGCATCCTTCTACCACGCA...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGGTACTTAACTACTTCTaGAGGGAAGTAAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRVLNYF*REVKVC
Trigger: GCAAACTTTTACTTCCCTGCAGAAGTAGTTAAGTAC...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCTGACCCTTGGAGTATaGGCAGGGCCGAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVLTLGV*AGPRWG
Trigger: CCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAG...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTGTCCATACAAGTACATaGGCCCAAGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFVHTST*AQVHPG
Trigger: CCCAGGGTGCACTTGGGCTCATGTACTTGTATGGAC...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTGCAGCTTCCGTATCCTaGCGGATGCCTTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFAASVS*RMPCPY
Trigger: GTATGGACAAGGCATCCGGCAGGATACGGAAGCTGC...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTGGCTGGAGTGCAATTTaGGCGATCTCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFGWSAI*AISAHC
Trigger: GCAGTGAGCTGAGATCGCGCAAATTGCACTCCAGCC...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGTCAGCAGTGGTAGTTTaGAGGGACTCGCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLSAVVV*RDSLVP
Trigger: TGGCACAAGCGAGTCCCTGCAAACTACCACTGCTGA...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGAGCGGTCACCTCATTTaGGGTGAAGGAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLSGHLI*GEGVQV
Trigger: AACCTGGACTCCTTCACCCCAAATGAGGTGACCGCT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTACTCCTTGGGCTCCTTaGTTGAGTAATACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGTPWAP*LSNTAR
Trigger: TCGGGCTGTATTACTCAACCAAGGAGCCCAAGGAGT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTGGGGTTTCACCACGTTaGCCAGCCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFGVSPR*PAWSQT
Trigger: AGTTTGAGACCAGGCTGGCCAACGTGGTGAAACCCC...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGATGGGAGCTGACCCTTaGAGTATGGGCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVMGADP*SMGRAE
Trigger: CTCGGCCCTGCCCATACTCCAAGGGTCAGCTCCCAT...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGCCAAATTAGTGCTTaGAGTGAGGCATTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGSQISA*SEALGR
Trigger: CCTCCCTAATGCCTCACTTCAAGCACTAATTTGGCT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGCAGTCAGAGCTCTTCTaGACTGGTACCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLQSELF*TGTFSA
Trigger: GGCAGAGAAGGTACCAGTGCAGAAGAGCTCTGACTG...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTCTTCCTCCAGCGAAGTaGAAAGAGAGACTCTATTCC +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGLPPAK*KERLYS
Trigger: GGAATAGAGTCTCTCTTTGCACTTCGCTGGAGGAAG...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGACTCCAGATTCCCATTaGCACATGCTTCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLTPDSH*HMLRNA
Trigger: GGCATTCCGAAGCATGTGGCAATGGGAATCTGGAGT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGGTAGAAGGATGCCATTaGCATGCCTCTGCCGATGAA +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLVEGCH*HASADE
Trigger: TTCATCGGCAGAGGCATGGCAATGGCATCCTTCTAC...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGGGAGTGAAGTTCATCTaGCAATGCGGGATTCAGACG +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLGVKFI*QCGIQT
Trigger: CGTCTGAATCCCGCATTGGCAGATGAACTTCACTCC...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCTCAGCGTCTAGAGTaGTCCCCAGCCCATCATAGT +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLSQRLE*SPAHHS
Trigger: ACTATGATGGGCTGGGGACCACTCTAGACGCTGAGA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTTCTCAGCGTCTAGAGTaGTCCCCAGCCCATCATAGT +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFSQRLE*SPAHHS
Trigger: ACTATGATGGGCTGGGGACCACTCTAGACGCTGAGA...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTCACCTCATTTGGGGTaGAGGAGTCCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVSPHLG*RSPGWP
Trigger: AGGCCAACCTGGACTCCTTCACCCCAAATGAGGTGA...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR TCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTACCAACTCCAGGACGTaGACATTCTTTACTAGGACA +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGTNSRT*TFFTRT
Trigger: TGTCCTAGTAAAGAATGTTCACGTCCTGGAGTTGGT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR TCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGAGCCAAATTAGTGCTTaGAGTGAGGCATTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLSQISA*SEALGR
Trigger: CCTCCCTAATGCCTCACTTCAAGCACTAATTTGGCT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGGCGATCTCAGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVAISAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGC...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTCCTTGGGCTCCTTaGTTGAGTAATACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFTPWAP*LSNTAR
Trigger: TCGGGCTGTATTACTCAACCAAGGAGCCCAAGGAGT...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTGCAACCTCTGCCTCCTaGTTTCAAGCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFATSAS*FQAVLL
Trigger: CAGAAGAACTGCTTGAAACCAGGAGGCAGAGGTTGC...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGGCAACCTCTGCCTCCTaGTTTCAAGCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLATSAS*FQAVLL
Trigger: CAGAAGAACTGCTTGAAACCAGGAGGCAGAGGTTGC...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTCCGGGAGACAGTCTGTaGCCTGGGCGATCATGGGGA +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSPGDSL*PGRSWG
Trigger: TCCCCATGATCGCCCAGGTCACAGACTGTCTCCCGG...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTCAAACCCGAGTCTGTTaGAATTTCTTCCCTTACACA +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGQTRVC*NFFPYT
Trigger: TGTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTG...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGGGATCTTCAAGTGGTTaGAGGAATGTTACATGGGTG +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLGSSSG*RNVTWV
Trigger: CACCCATGTAACATTCCTTCAACCACTTGAAGATCC...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTATTTCCATTGTCTGCTaGGATAAGCCACAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGISIVC*DKPQSF
Trigger: GAAAGACTGTGGCTTATCGCAGCAGACAATGGAAAT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGGCTTCTCTTAAGCACTaGAGGGCAGCTTCCGTATCC +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVASLKH*RAASVS
Trigger: GGATACGGAAGCTGCCCTGCAGTGCTTAAGAGAAGC...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGGGCAATATCAACGTGTaGTCACCTCACAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLGNINV*SPHKSD
Trigger: GTCAGATTTGTGAGGTGAGCACACGTTGATATTGCC...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGCGTCCTGTCTGGCTATaGGTTTATACATCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLRPVWL*VYTSRW
Trigger: CCATCTTGATGTATAAACCCATAGCCAGACAGGACG...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGACTCGGCTGGAGCTTTaGTTTCTAAGCAGATCCTTC +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLTRLEL*FLSRSF
Trigger: GAAGGATCTGCTTAGAAACCAAAGCTCCAGCCGAGT...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR TCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGAGCCCGAGCATACTTTaGGCCTTCACACTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVSPSIL*AFTLAL
Trigger: CAAAGCTAGTGTGAAGGCTCAAAGTATGCTCGGGCT...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGCAAACCCGAGTCTGTTaGAATTTCTTCCCTTACACA +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLQTRVC*NFFPYT
Trigger: TGTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTG...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTATATCTCAAAGAGGTTaGAACTCTACAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGISQRG*NSTGCS
Trigger: TGAACAGCCTGTAGAGTTTCAACCTCTTTGAGATAT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTGCTCACTGCAACCTCTaGCTCCTGGTTTCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSAHCNL*LLVSSS
Trigger: ACTGCTTGAAACCAGGAGGCAGAGGTTGCAGTGAGC...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTTGGGCAGGGCCGAGATaGGGGAGCGGAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFWAGPR*GSGKRR
Trigger: CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCA...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTCCGGGAGACAGTCTGTaGCCTGGGCGATCATGGGGA +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFPGDSL*PGRSWG
Trigger: TCCCCATGATCGCCCAGGTCACAGACTGTCTCCCGG...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGAATGGTTTTAATACTTaGTATGGTCTCGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLNGFNT*YGLGQS
Trigger: AGACTGGCCGAGACCATATCAAGTATTAAAACCATT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATAAACTCCTGACCTCATaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNKLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCATGAGGTCAGGAGTTT...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTAAACTCCTGACCTCATaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSKLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCATGAGGTCAGGAGTTT...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGCTTCAAGAGCTGCAATaGCTTATCCACCAAATTAGC +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLLQELQ*LIHQIS
Trigger: GCTAATTTGGTGGATAAGGCATTGCAGCTCTTGAAG...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTATTTCCATTGTCTGCTaGGATAAGCCACAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFISIVC*DKPQSF
Trigger: GAAAGACTGTGGCTTATCGCAGCAGACAATGGAAAT...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGGGGATTTCCATTGTCTaGTGCGATAAGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVGISIV*CDKPQS
Trigger: AGACTGTGGCTTATCGCAGCAGACAATGGAAATCCC...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGATTCCCATTGCCACATaGTTCGGAATGCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLIPIAT*FGMPVK
Trigger: TTTTACTGGCATTCCGAAGCATGTGGCAATGGGAAT...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTCCGTATCCTGCCGGATaGCTTGTCCATACAAGTACA +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSPYPAG*LVHTST
Trigger: TGTACTTGTATGGACAAGGCATCCGGCAGGATACGG...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGAAGTTCATCTGCCAATaGGGGATTCAGACGACAAGC +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVKFICQ*GIQTTS
Trigger: GCTTGTCGTCTGAATCCCGCATTGGCAGATGAACTT...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTTTTGTATTTACTCCTTaGCATTCCACTGTTATGGCT +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGFVFTP*HSTVMA
Trigger: AGCCATAACAGTGGAATGCCAAGGAGTAAATACAAA...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGAGTCAGCGATCCTTTTaGAAAATGCAACACACTTTG +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLSQRSF*KMQHTL
Trigger: CAAAGTGTGTTGCATTTTCCAAAAGGATCGCTGACT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGATGGCATCCTCGTTCTaGAAACGCATCTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVMASSF*KRIYQQ
Trigger: TTGCTGGTAGATGCGTTTCCAGAACGAGGATGCCAT...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGTCCATACAAGTACATaGGCCCAAGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNVHTST*AQVHPG
Trigger: CCCAGGGTGCACTTGGGCTCATGTACTTGTATGGAC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAACCATGCCTCTGCCGATaGACTCCGGGAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISEPCLCR*TPGDSL
Trigger: CAGACTGTCTCCCGGAGTTCATCGGCAGAGGCATGG...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGAAATACATGACCATTTaGGGATATCTCAAACCCGAG +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLKYMTI*GYLKPE
Trigger: CTCGGGTTTGAGATATCCTCAAATGGTCATGTATTT...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTAAATACATGACCATTTaGGGATATCTCAAACCCGAG +
Preference number: 4 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFKYMTI*GYLKPE
Trigger: CTCGGGTTTGAGATATCCTCAAATGGTCATGTATTT...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTTGGACAGGTACGCTGTaGTTAAAGGGAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSWTGTL*LKGEKL
Trigger: CAGCTTTTCTCCCTTTAATCACAGCGTACCTGTCCA...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTGCAGCTTCCGTATCCTaGCGGATGCCTTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSAASVS*RMPCPY
Trigger: GTATGGACAAGGCATCCGGCAGGATACGGAAGCTGC...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTGAGCAAATACTTTTCTaGCATTCAACAGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGEQILF*HSTVLS
Trigger: ACTAAGAACTGTTGAATGGCAGAAAAGTATTTGCTC...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTGGCAGTTTAAAAAGTaGTCTTTACTTAGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLWQFKK*SLLRAD
Trigger: ATCGGCCCTAAGTAAAGAGCACTTTTTAAACTGCCA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAACGCCTATAAAATATaGATCTTAGATCATCTTCCG +
Preference number: 4 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGNAYKI*ILDHLP
Trigger: CGGAAGATGATCTAAGATGCATATTTTATAGGCGTT...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTAGCCCAAGTGCACCCTaGGACTCCAGATTCCCATTG +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVSPSAP*DSRFPL
Trigger: CAATGGGAATCTGGAGTCCCAGGGTGCACTTGGGCT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTAGCCCAAGTGCACCCTaGGACTCCAGATTCCCATTG +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSSPSAP*DSRFPL
Trigger: CAATGGGAATCTGGAGTCCCAGGGTGCACTTGGGCT...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGAAACAAAAGCGAAACTaGCAATATCAACGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLKQKRN*QYQRVL
Trigger: GAGCACACGTTGATATTGCCAGTTTCGCTTTTGTTT...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATCTCTGCCCTTGTAACTaGCACTCATCGGACGAATCC +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNLCPCN*HSSDES
Trigger: GGATTCGTCCGATGAGTGTCAGTTACAAGGGCAGAG...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR TCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTGCATCGCATTCACCATaGGACCTGTTTGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSASHSP*DLFARP
Trigger: AGGACGTGCAAACAGGTCTCATGGTGAATGCGATGC...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGCTGTCTGTATTGGATTaGCATGTTATAAGATGGATC +
Preference number: 4 (lower is better)
Translates to: NALELQTHRSLRSRGLLLLSVLD*HVIRWI
Trigger: GATCCATCTTATAACATGGCAATCCAATACAGACAG...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTGTACATGAGCCCAAGTaGACCCTGGGACTCCAGATT +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSVHEPK*TLGLQI
Trigger: AATCTGGAGTCCCAGGGTGCACTTGGGCTCATGTAC...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTGCTTCTCTTAAGCACTaGAGGGCAGCTTCCGTATCC +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSASLKH*RAASVS
Trigger: GGATACGGAAGCTGCCCTGCAGTGCTTAAGAGAAGC...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGGAAGTAAAAGTTTGCTaGCTTCTCCAGAAACAAAAT +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLEVKVC*LLQKQN
Trigger: ATTTTGTTTCTGGAGAAGGCAGCAAACTTTTACTTC...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTAAAATTGATCCCACCTaGTACACGCCTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSKIDPT*YTPGET
Trigger: AGTTTCACCAGGCGTGTAGCAGGTGGGATCAATTTT...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGGTTTATACATCAAGATaGGTCAAGTCACCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVVYTSR*VKSPST
Trigger: TGTGCTGGGTGACTTGACCCATCTTGATGTATAAAC...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CCA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGATTTGGATCTTCAAGTaGTTGAAGGAATGTTACATG +
Preference number: 4 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLIWIFK*LKECYM
Trigger: CATGTAACATTCCTTCAACCACTTGAAGATCCAAAT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR CAA 72 bp GGTAAGAGGTGGACCTCTGAGGACTCTTCCAGCAATTaGACCTTGTGTCTAGGTTTCAAGTTGCAAAACTTA +
Preference number: 4 (lower is better)
Translates to: GKRWTSEDSSSN*TLCLGFKLQNL
Trigger: TAAGTTTTGCAACTTGAAACCTAGACACAAGGTCAAATTGCTGGAAGAGTCCTCAGAGGTCCACCTCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTGAGAGACCCTTAGTGTaGTTGGAAAGCTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSERPLV*LESCIF
Trigger: AAAAATGCAGCTTTCCAATCACACTAAGGGTCTCTC...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR TCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTAGCCCGAGCATACTTTaGGCCTTCACACTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVSPSIL*AFTLAL
Trigger: CAAAGCTAGTGTGAAGGCTCAAAGTATGCTCGGGCT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTTGTTTCATCCCTGGTaGTGCCCAAGCCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNLFHPW*CPSQAE
Trigger: TTCAGCTTGGCTTGGGCATCACCAGGGATGAAACAA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTACTTCTGTGCAAACCTaGAGCTTCAACACGTGTTTT +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSTSVQT*SFNTCF
Trigger: AAAACACGTGTTGAAGCTTCAGGTTTGCACAGAAGT...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR GCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTCCGTATCCTGCCGGATaGCTTGTCCATACAAGTACA +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVPYPAG*LVHTST
Trigger: TGTACTTGTATGGACAAGGCATCCGGCAGGATACGG...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTGTAGAAGGATGCCATTaGCATGCCTCTGCCGATGAA +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVVEGCH*HASADE
Trigger: TTCATCGGCAGAGGCATGGCAATGGCATCCTTCTAC...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTGGCTGGAGTGCAATTTaGGCGATCTCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFGWSAI*AISAHC
Trigger: GCAGTGAGCTGAGATCGCGCAAATTGCACTCCAGCC...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTGCAGGGACTCGCTTGTaGCAGAGCATTAGCTTTATG +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVAGTRL*QSISFM
Trigger: CATAAAGCTAATGCTCTGGCACAAGCGAGTCCCTGC...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTATCTGGAAGTCTCAATaGACTCGAGTTACAGACTCA +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSIWKSQ*TRVTDS
Trigger: TGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGAT...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGGCAAAGGTTCCTGATTaGTGGTCAAGAGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVAKVPD*WSREEI
Trigger: TATTTCTTCTCTTGACCACCAATCAGGAACCTTTGC...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CCA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGGCATGTTACCATGTATaGCACACGTCAAAGTTTATG +
Preference number: 4 (lower is better)
Translates to: GILEKECVCVYVCVCVCVACYHV*HTSKFM
Trigger: CATAAACTTTGACGTGTGCCATACATGGTAACATGC...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTCCGTTTTAGAAAATTaGTCCCACCTGCTACACGCC +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNSVLEN*SHLLHA
Trigger: GGCGTGTAGCAGGTGGGATCAATTTTCTAAAACGGA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR GCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGGGATTTCCATTGTCTaGTGCGATAAGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNGISIV*CDKPQS
Trigger: AGACTGTGGCTTATCGCAGCAGACAATGGAAATCCC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAGTACATGAGCCCAAGTaGACCCTGGGACTCCAGATT +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISEVHEPK*TLGLQI
Trigger: AATCTGGAGTCCCAGGGTGCACTTGGGCTCATGTAC...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTAAGCTGAAGACACCTTaGGTGGTAGAAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSKLKTP*VVEGCH
Trigger: ATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTT...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTGCTCACTGCAACCTCTaGCTCCTGGTTTCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFAHCNL*LLVSSS
Trigger: ACTGCTTGAAACCAGGAGGCAGAGGTTGCAGTGAGC...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTAGTCAGCGATCCTTTTaGAAAATGCAACACACTTTG +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSSQRSF*KMQHTL
Trigger: CAAAGTGTGTTGCATTTTCCAAAAGGATCGCTGACT...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTGCATGTTACCATGTATaGCACACGTCAAAGTTTATG +
Preference number: 4 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSACYHV*HTSKFM
Trigger: CATAAACTTTGACGTGTGCCATACATGGTAACATGC...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTTTCCATTTGAATCCCTaGAAGATACTCCCCTCATGC +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVFHLNP*KILPSC
Trigger: GCATGAGGGGAGTATCTTTCAGGGATTCAAATGGAA...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTACCATGAGACCTGTTTaGACGTCCTGTCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFTMRPV*TSCLAM
Trigger: CATAGCCAGACAGGACGTGCAAACAGGTCTCATGGT...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTCTATTCCCACCAGGTaGTCATTAGGAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNSIPTR*SLGKAS
Trigger: GGATGCTTTTCCTAATGAGCACCTGGTGGGAATAGA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTACTCCAGATTCCCATTaGCACATGCTTCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFTPDSH*HMLRNA
Trigger: GGCATTCCGAAGCATGTGGCAATGGGAATCTGGAGT...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTGGAGTGAAGTTCATCTaGCAATGCGGGATTCAGACG +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFGVKFI*QCGIQT
Trigger: CGTCTGAATCCCGCATTGGCAGATGAACTTCACTCC...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTGCAGGGACTCGCTTGTaGCAGAGCATTAGCTTTATG +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFAGTRL*QSISFM
Trigger: CATAAAGCTAATGCTCTGGCACAAGCGAGTCCCTGC...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTTCCAGCAAAGGTTCCTaGTTGGTGGTCAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFSSKGS*LVVKRR
Trigger: TCTTCTCTTGACCACCAATCAGGAACCTTTGCTGGA...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTCTTCAAGAGCTGCAATaGCTTATCCACCAAATTAGC +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVLQELQ*LIHQIS
Trigger: GCTAATTTGGTGGATAAGGCATTGCAGCTCTTGAAG...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTCTTTCCTTCAAGAGCTaGAATGCCTTATCCACCAAA +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSLSFKS*NALSTK
Trigger: TTTGGTGGATAAGGCATTGCAGCTCTTGAAGGAAAG...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTAAGCTGAAGACACCTTaGGTGGTAGAAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFKLKTP*VVEGCH
Trigger: ATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTT...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAAAGTTCATCTGCCAATaGGGGATTCAGACGACAAGC +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISEKFICQ*GIQTTS
Trigger: GCTTGTCGTCTGAATCCCGCATTGGCAGATGAACTT...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTATCTGGAAGTCTCAATaGACTCGAGTTACAGACTCA +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSIWKSQ*TRVTDS
Trigger: TGAGTCTGTAACTCGAGTGCATTGAGACTTCCAGAT...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTTTGCACGTCCTGTCTaGCTATGGGTTTATACATCA +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNFARPV*LWVYTS
Trigger: TGATGTATAAACCCATAGCCAGACAGGACGTGCAAA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTTCAGCTTCCTCATTTaGTCGTTTAACACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNFSFLI*SFNTFS
Trigger: GGAAAAGGTGTTAAACGATCAAATGAGGAAGCTGAA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATAATGGTTTTAATACTTaGTATGGTCTCGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNNGFNT*YGLGQS
Trigger: AGACTGGCCGAGACCATATCAAGTATTAAAACCATT...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTATATCTCAAAGAGGTTaGAACTCTACAGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVISQRG*NSTGCS
Trigger: TGAACAGCCTGTAGAGTTTCAACCTCTTTGAGATAT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTAAGGTTCCTGATTGGTaGTCAAGAGAAGAAATAGAG +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSKVPDW*SREEIE
Trigger: CTCTATTTCTTCTCTTGACCACCAATCAGGAACCTT...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CCA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGGTAAGAGTAATGATCTaGAAGTCTCAATGCACTCGA +
Preference number: 4 (lower is better)
Translates to: CHFSMRYQLQGILEKECVVRVMI*KSQCTR
Trigger: TCGAGTGCATTGAGACTTCCAGATCATTACTCTTAC...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAAACACTCGCTGTAAATaGCATCCTCGTTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISENTRCK*HPRSGN
Trigger: GTTTCCAGAACGAGGATGCCATTTACAGCGAGTGTT...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
3UTR CAA 72 bp TCTTCCAGCAATTTGACCTTGTGTCTAGGTTTCAAGTaGCAAAACTTAACAGCGTACGAATTCAAGAACGAA +
Preference number: 4 (lower is better)
Translates to: SSSNLTLCLGFK*QNLTAYEFKNE
Trigger: TTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACACAAGGTCAAATTGCTGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGTTTAGAGGACAAGCATaGACTTGTTTTCTAACAGCA +
Preference number: 4 (lower is better)
Translates to: CHFSMRYQLQGILEKECVFRGQA*TCFLTA
Trigger: TGCTGTTAGAAAACAAGTTCATGCTTGTCCTCTAAA...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTCTTTCCTTCAAGAGCTaGAATGCCTTATCCACCAAA +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFLSFKS*NALSTK
Trigger: TTTGGTGGATAAGGCATTGCAGCTCTTGAAGGAAAG...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAATTCCCATTGCCACATaGTTCGGAATGCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISEIPIAT*FGMPVK
Trigger: TTTTACTGGCATTCCGAAGCATGTGGCAATGGGAAT...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTGGCATTCCACTGTTATaGCTTACTTTCACCAATCAG +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFGIPLL*LTFTNQ
Trigger: CTGATTGGTGAAAGTAAGCCATAACAGTGGAATGCC...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTGAGCAAATACTTTTCTaGCATTCAACAGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVEQILF*HSTVLS
Trigger: ACTAAGAACTGTTGAATGGCAGAAAAGTATTTGCTC...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGGAAGTAAAAGTTTGCTaGCTTCTCCAGAAACAAAAT +
Preference number: 4 (lower is better)
Translates to: CHFSMRYQLQGILEKECVEVKVC*LLQKQN
Trigger: ATTTTGTTTCTGGAGAAGGCAGCAAACTTTTACTTC...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTACAGTATCTCTACACTaGCGTTCTTTAAACATCATT +
Preference number: 4 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSTVSLH*RSLNII
Trigger: AATGATGTTTAAAGAACGGCAGTGTAGAGATACTGT...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTATTTGGATCTTCAAGTaGTTGAAGGAATGTTACATG +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVIWIFK*LKECYM
Trigger: CATGTAACATTCCTTCAACCACTTGAAGATCCAAAT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CCA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTATAATCTTTAGGAACTaGATTAAGTGTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QTSQNIKREQILFCHSTVIIFRN*IKCGEE
Trigger: CTCTTCTCCACACTTAATCCAGTTCCTAAAGATTAT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR TCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAAAGATGGATCACAGTTaGATGGTAAATCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISEKMDHS*MVNQCL
Trigger: AAGACACTGATTTACCATTCAACTGTGATCCATCTT...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR GCA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAGTACTTAACTACTTCTaGAGGGAAGTAAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ISIACYHVWHTSKFMISEVLNYF*REVKVC
Trigger: GCAAACTTTTACTTCCCTGCAGAAGTAGTTAAGTAC...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
3UTR CAA 72 bp TTGGAGACTCGGTGTTTAAGAAAGGATAAACGATACTaGCTGTATAGAATGGTTTTAATACTTGATATGGTC +
Preference number: 4 (lower is better)
Translates to: LETRCLRKDKRY*LYRMVLILDMV
Trigger: GACCATATCAAGTATTAAAACCATTCTATACAGCAAGTATCGTTTATCCTTTCTTAAACACCGAGTCTCCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR GCA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTTTTACTGTCACCTTTTaGCTTCATAGATGTCATCTA +
Preference number: 4 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFFTVTF*LHRCHL
Trigger: TAGATGACATCTATGAAGGCAAAAGGTGACAGTAAA...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGGATGGAGTCTCGCTCTaGTCACCGAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRDGVSL*SPRLEC
Trigger: GCACTCCAGCCTCGGTGACAAGAGCGAGACTCCATC...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCTCCACGAGATTCCCTaGAGCATAGACGTTTCCGCG +
Preference number: 5 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRLHEIP*SIDVSA
Trigger: CGCGGAAACGTCTATGCTCAAGGGAATCTCGTGGAG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGCACCATGAGACCTGTTaGCACGTCCTGTCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRHHETC*HVLSGY
Trigger: ATAGCCAGACAGGACGTGCAAACAGGTCTCATGGTG...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS GCA 90 bp GCCCAAGCCAAGCTGAAGACACCTTGCGTGGTAGAAGGATGCCATTaGCATGCCTCTGCCGATGAACTCCGGGAGACAGTCTGTGACCTG +
Preference number: 5 (lower is better)
Translates to: AQAKLKTPCVVEGCH*HASADELRETVCDL
Trigger: CAGGTCACAGACTGTCTCCCGGAGTTCATCGGCAGAGGCATGGCAATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTGGCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 90 bp GGTGATGCCCAAGCCAAGCTGAAGACACCTTGCGTGGTAGAAGGATaGCATTGCCATGCCTCTGCCGATGAACTCCGGGAGACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GDAQAKLKTPCVVEG*HCHASADELRETVC
Trigger: ACAGACTGTCTCCCGGAGTTCATCGGCAGAGGCATGGCAATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTGGCTTGGGCATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 90 bp CGTTCTGCTGCTTCTCTTAAGCACTGCAGGGCAGCTTCCGTATCCTaGCGGATGCCTTGTCCATACAAGTACATGAGCCCAAGTGCACCC +
Preference number: 5 (lower is better)
Translates to: RSAASLKHCRAASVS*RMPCPYKYMSPSAP
Trigger: GGGTGCACTTGGGCTCATGTACTTGTATGGACAAGGCATCCGGCAGGATACGGAAGCTGCCCTGCAGTGCTTAAGAGAAGCAGCAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 90 bp GGTTGTTTCATCCCTGGTGATGCCCAAGCCAAGCTGAAGACACCTTaGGTGGTAGAAGGATGCCATTGCCATGCCTCTGCCGATGAACTC +
Preference number: 5 (lower is better)
Translates to: GCFIPGDAQAKLKTP*VVEGCHCHASADEL
Trigger: GAGTTCATCGGCAGAGGCATGGCAATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTGGCTTGGGCATCACCAGGGATGAAACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS-3UTR CAA 90 bp GAGCTGACCCTTGGAGTATGGGCAGGGCCGAGATGGGGGAGCGGAAAGAGGAGGAGACAGCAAACTCAGTaGTTGCTACACTTTTGTATT +
Preference number: 5 (lower is better)
Translates to: ELTLGVWAGPRWGSGKRRRQQTQ*LLHFCI
Trigger: AATACAAAAGTGTAGCAACAACTGAGTTTGCTGTCT...CCTCCTCTTTCCGCTCCCCCATCTCGGCCCTGCCCATACTCCAAGGGTCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CAA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTCACCCAGCACAAGTGTaGCCACTTAGTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFHPAQV*PLSGTW
Trigger: CCAGGTCCCACTAAGTGGCAACACTTGTGCTGGGTG...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CAA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTCACTCGGCTGGAGCTTaGGTTTCTAAGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGHSAGA*VSKQIL
Trigger: AAGGATCTGCTTAGAAACCAAAGCTCCAGCCGAGTG...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS GCA 90 bp ATGGGTTTATACATCAAGATGGGTCAAGTCACCCAGCACAAGTGTTaGCACTTAGTGGGACCTGGTGACACTGCCCACAGTCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: MGLYIKMGQVTQHKC*HLVGPGDTAHSQSS
Trigger: AGAGCTCTGACTGTGGGCAGTGTCACCAGGTCCCACTAAGTGGCAACACTTGTGCTGGGTGACTTGACCCATCTTGATGTATAAACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS-3UTR CAA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTCTCCTAGCTGGTAAGTaGCTTGATGGTCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGLLAGK*LDGLSP
Trigger: AGGAGAAAGACCATCAAGCAACTTACCAGCTAGGAG...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGATCCTGCCGGATGCCTaGTCCATACAAGTACATGAG +
Preference number: 5 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLILPDA*SIQVHE
Trigger: CTCATGTACTTGTATGGACAAGGCATCCGGCAGGAT...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS TCA 90 bp TTCTCTCATCGCCTAGATAGAACACCAACCACCAACTCCAGGACGTaGACATTCTTTACTAGGACACCAAGACCCTCCTCCCTAGCTGAG +
Preference number: 5 (lower is better)
Translates to: FSHRLDRTPTTNSRT*TFFTRTPRPSSLAE
Trigger: CTCAGCTAGGGAGGAGGGTCTTGGTGTCCTAGTAAAGAATGTTCACGTCCTGGAGTTGGTGGTTGGTGTTCTATCTAGGCGATGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS-3UTR CAA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGCAGCCCGAGCATACTTaGAGCCTTCACACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: NALELQTHRSLRSRGLLLQPEHT*SLHTSF
Trigger: AAAGCTAGTGTGAAGGCTCAAAGTATGCTCGGGCTG...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCTCCACGAGATTCCCTaGAGCATAGACGTTTCCGCG +
Preference number: 5 (lower is better)
Translates to: GILEKECVCVYVCVCVCVLHEIP*SIDVSA
Trigger: CGCGGAAACGTCTATGCTCAAGGGAATCTCGTGGAG...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCAAGCTGAAGACACCTaGCGTGGTAGAAGGATGCCA +
Preference number: 5 (lower is better)
Translates to: GILEKECVCVYVCVCVCVQAEDT*RGRRMP
Trigger: TGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTG...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTTACTCATTAAGATCTTaGAGGGAAGATTTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGYSLRS*REDLEG
Trigger: CCCCTCCAAATCTTCCCTCAAAGATCTTAATGAGTA...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTCAAGCTGAAGACACCTaGCGTGGTAGAAGGATGCCA +
Preference number: 5 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSQAEDT*RGRRMP
Trigger: TGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTG...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGTCCAGCAATTTGACCTaGTGTCTAGGTTTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLSSNLT*CLGFKL
Trigger: CAACTTGAAACCTAGACACAAGGTCAAATTGCTGGA...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGTCAAACCCGAGTCTGTaGAAATTTCTTCCCTTACAC +
Preference number: 5 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLSNPSL*KFLPLH
Trigger: GTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTGA...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGGATGGAGTCTCGCTCTaGTCACCGAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: CHFSMRYQLQGILEKECVDGVSL*SPRLEC
Trigger: GCACTCCAGCCTCGGTGACAAGAGCGAGACTCCATC...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp ACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTTATATCTCAAAGAGGTaGAAACTCTACAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: TDSPQSQVKGFTTVLSSGYISKR*KLYRLF
Trigger: GAACAGCCTGTAGAGTTTCAACCTCTTTGAGATATA...ACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTTCCGTTTTAGAAAATaGATCCCACCTGCTACACGC +
Preference number: 5 (lower is better)
Translates to: NALELQTHRSLRSRGLLLFRFRK*IPPATR
Trigger: GCGTGTAGCAGGTGGGATCAATTTTCTAAAACGGAA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS TCA 90 bp AGACAGCCATTCTCCATGTCATTTTCCACAGCATCGCATTCACCATaGGACCTGTTTGCACGTCCTGTCTGGCTATGGGTTTATACATCA +
Preference number: 5 (lower is better)
Translates to: RQPFSMSFSTASHSP*DLFARPVWLWVYTS
Trigger: TGATGTATAAACCCATAGCCAGACAGGACGTGCAAACAGGTCTCATGGTGAATGCGATGCTGTGGAAAATGACATGGAGAATGGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS GCA 90 bp CTCCATGTCATTTTCCACAGCATCGCATTCACCATGAGACCTGTTTaGACGTCCTGTCTGGCTATGGGTTTATACATCAAGATGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LHVIFHSIAFTMRPV*TSCLAMGLYIKMGQ
Trigger: TTGACCCATCTTGATGTATAAACCCATAGCCAGACAGGACGTGCAAACAGGTCTCATGGTGAATGCGATGCTGTGGAAAATGACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS GCA 90 bp TTCTTCCTCCAGCGAAGTGCAAAGAGAGACTCTATTCCCACCAGGTaGTCATTAGGAAAAGCATCCTTCTCTCATCGCCTAGATAGAACA +
Preference number: 5 (lower is better)
Translates to: FFLQRSAKRDSIPTR*SLGKASFSHRLDRT
Trigger: TGTTCTATCTAGGCGATGAGAGAAGGATGCTTTTCCTAATGAGCACCTGGTGGGAATAGAGTCTCTCTTTGCACTTCGCTGGAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS-3UTR CAA 90 bp TCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCTCAGCAGTGGTAGTTTGTGTCTAGGTTTCAAGTaGCAAAACTTAACAGCGTAC +
Preference number: 5 (lower is better)
Translates to: SPQSQVKGFTTVLSSGSLCLGFK*QNLTAY
Trigger: GTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACA...CAAACTACCACTGCTGAGGACAGTAGTAAACCCCTTGACCTGAGACTGCGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTCCAGCAATTTGACCTaGTGTCTAGGTTTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: NALELQTHRSLRSRGLLLSSNLT*CLGFKL
Trigger: CAACTTGAAACCTAGACACAAGGTCAAATTGCTGGA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATCTCAGCAGTGGTAGTTaGCAGGGACTCGCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNLSSGS*QGLACA
Trigger: GGCACAAGCGAGTCCCTGCAAACTACCACTGCTGAG...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AAGTCTCAATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTTTTTGTATTTACTCCTaGGCATTCCACTGTTATGGC +
Preference number: 5 (lower is better)
Translates to: KSQCTRVTDSPQSQVKGFFCIYS*AFHCYG
Trigger: GCCATAACAGTGGAATGCCAAGGAGTAAATACAAAA...AAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATTGAGACTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CAA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTCCTTGGGCTCCTTGGTaGAGTAATACAGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSPWAPW*SNTARA
Trigger: TGCTCGGGCTGTATTACTCAACCAAGGAGCCCAAGG...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGTATATCTCAAAGAGGTaGAAACTCTACAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: NALELQTHRSLRSRGLLLYISKR*KLYRLF
Trigger: GAACAGCCTGTAGAGTTTCAACCTCTTTGAGATATA...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AATGCACTCGAGTTACAGACTCACCGCAGTCTCAGGTCAAGGGGTTTACTACTGGTTGTTGCTACACTTTaGTATTTACTCCTTGGCATT +
Preference number: 5 (lower is better)
Translates to: NALELQTHRSLRSRGLLLVVATL*YLLLGI
Trigger: AATGCCAAGGAGTAAATACAAAAGTGTAGCAACAAC...CAGTAGTAAACCCCTTGACCTGAGACTGCGGTGAGTCTGTAACTCGAGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CAA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTCTCAGCAGTGGTAGTTaGCAGGGACTCGCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFLSSGS*QGLACA
Trigger: GGCACAAGCGAGTCCCTGCAAACTACCACTGCTGAG...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGAGAGGCAATGTGAAGTaGTCAAGCCTGAAGAACTTA +
Preference number: 5 (lower is better)
Translates to: GILEKECVCVYVCVCVCVRGNVK*SSLKNL
Trigger: TAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCT...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATCAGCCCGAGCATACTTaGAGCCTTCACACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNQPEHT*SLHTSF
Trigger: AAAGCTAGTGTGAAGGCTCAAAGTATGCTCGGGCTG...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAACCTTGGGCTCCTTGGTaGAGTAATACAGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: ISIACYHVWHTSKFMISEPWAPW*SNTARA
Trigger: TGCTCGGGCTGTATTACTCAACCAAGGAGCCCAAGG...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTATCCTGCCGGATGCCTaGTCCATACAAGTACATGAG +
Preference number: 5 (lower is better)
Translates to: QTSQNIKREQILFCHSTVILPDA*SIQVHE
Trigger: CTCATGTACTTGTATGGACAAGGCATCCGGCAGGAT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTTTTGCAGGGACTCGCTaGTGCCAGAGCATTAGCTTT +
Preference number: 5 (lower is better)
Translates to: QTSQNIKREQILFCHSTVFAGTR*CQSISF
Trigger: AAAGCTAATGCTCTGGCACAAGCGAGTCCCTGCAAA...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATTTTGCAGGGACTCGCTaGTGCCAGAGCATTAGCTTT +
Preference number: 5 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNFAGTR*CQSISF
Trigger: AAAGCTAATGCTCTGGCACAAGCGAGTCCCTGCAAA...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTAGAGGCAATGTGAAGTaGTCAAGCCTGAAGAACTTA +
Preference number: 5 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSRGNVK*SSLKNL
Trigger: TAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCT...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GGAATCTTAGAGAAGGAGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCAAATTTTAAGTGTCTaGCTTTGGGACATGGAGAAT +
Preference number: 5 (lower is better)
Translates to: GILEKECVCVYVCVCVCVQILSV*LWDMEN
Trigger: ATTCTCCATGTCCCAAAGCAAGACACTTAAAATTTG...CACACACACACACACACACACATACACACACACACACTCCTTCTCTAAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS CCA 90 bp GTTGTTGCTACACTTTTGTATTTACTCCTTGGCATTCCACTGTTATaGCTTACTTTCACCAATCAGAAACAAGCTTCCAGCAAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: VVATLLYLLLGIPLL*LTFTNQKQASSKGS
Trigger: GGAACCTTTGCTGGAAGCTTGTTTCTGATTGGTGAAAGTAAGCCATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS-3UTR CAA 90 bp GACCACAGGGACATTAGGGGAGATCCAGAGTACAGACTTTGTGTTATTGATAGTAGGACAAGCATGAACTaGTTTTCTAACAGCATAACA +
Preference number: 5 (lower is better)
Translates to: DHRDIRGDPEYRLCVIDSRTSMN*FSNSIT
Trigger: TGTTATGCTGTTAGAAAACAAGTTCATGCTTGTCCT...ACTATCAATAACACAAAGTCTGTACTCTGGATCTCCCCTAATGTCCCTGTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS TCA 90 bp AGTACATCACTCCTAGCTGGTAAGTTGCTTGATGGTCTTTCTCCTTaGTTTCTTCAAACTGTTCTAATGCTTCTTCATACCATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: STSLLAGKLLDGLSP*FLQTVLMLLHTIPL
Trigger: AAGAGGGATGGTATGAAGAAGCATTAGAACAGTTTGAAGAAATCAAGGAGAAAGACCATCAAGCAACTTACCAGCTAGGAGTGATGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
ENST00000511404.1
CDS-3UTR CAA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAACTCCTAGCTGGTAAGTaGCTTGATGGTCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ISIACYHVWHTSKFMISELLAGK*LDGLSP
Trigger: AGGAGAAAGACCATCAAGCAACTTACCAGCTAGGAG...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTTCAAACCCGAGTCTGTaGAAATTTCTTCCCTTACAC +
Preference number: 5 (lower is better)
Translates to: QTSQNIKREQILFCHSTVSNPSL*KFLPLH
Trigger: GTGTAAGGGAAGAAATTTCAACAGACTCGGGTTTGA...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTTGGATCTTCAAGTGGTaGAAGGAATGTTACATGGGT +
Preference number: 5 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSWIFKW*KECYMG
Trigger: ACCCATGTAACATTCCTTCAACCACTTGAAGATCCA...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTTGGATCTTCAAGTGGTaGAAGGAATGTTACATGGGT +
Preference number: 5 (lower is better)
Translates to: QTSQNIKREQILFCHSTVWIFKW*KECYMG
Trigger: ACCCATGTAACATTCCTTCAACCACTTGAAGATCCA...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS TCA 90 bp CTTCCTGTCTGTATTGGATTGCCATGTTATAAGATGGATCACAGTTaGATGGTAAATCAGTGTCTTCATATAAAATGTAGCGGTCACCTC +
Preference number: 5 (lower is better)
Translates to: LPVCIGLPCYKMDHS*MVNQCLHIKCSGHL
Trigger: GAGGTGACCGCTACATTTTATATGAAGACACTGATTTACCATTCAACTGTGATCCATCTTATAACATGGCAATCCAATACAGACAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000510776.5
ENST00000511404.1
CDS GCA 90 bp ATGGAGGCACTTTCACCACACAAATATCCCACTACATATGCTAACTaGAGTATTTATGTTCAAAACTGTAAGAACGTGTCTGATACCCTT +
Preference number: 5 (lower is better)
Translates to: MEALSPHKYPTTYAN*SIYVQNCKNVSDTL
Trigger: AAGGGTATCAGACACGTTCTTACAGTTTTGAACATAAATACTGCAGTTAGCATATGTAGTGGGATATTTGTGTGGTGAAAGTGCCTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CAA 90 bp GTGTCTAGGTTTCAAGTTGCAAAACTTAACAGCGTACGAATTCAAGAACGAAGTCCTGTCTGTATTGGATaGCCATGTTATAAGATGGAT +
Preference number: 5 (lower is better)
Translates to: VSRFQVAKLNSVRIQERSPVCIG*PCYKMD
Trigger: ATCCATCTTATAACATGGCAATCCAATACAGACAGG...ACTTCGTTCTTGAATTCGTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CAA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGTTTAAGTGTCTTGCTTaGGGACATGGAGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: CHFSMRYQLQGILEKECVFKCLA*GHGESR
Trigger: TCTTGATTCTCCATGTCCCAAAGCAAGACACTTAAA...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTCTTGCCAGTAAGATATaGTCCCCCAAATGTACTTAT +
Preference number: 5 (lower is better)
Translates to: QTSQNIKREQILFCHSTVLASKI*SPKCTY
Trigger: ATAAGTACATTTGGGGGACAATATCTTACTGGCAAG...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CAA 90 bp TGTCATTTTTCCATGAGATATCAGCTACAAGGAATCTTAGAGAAGGAGTGTGTGATCTTCCTGTCTGTATaGGATTGCCATGTTATAAGA +
Preference number: 5 (lower is better)
Translates to: CHFSMRYQLQGILEKECVIFLSV*DCHVIR
Trigger: TCTTATAACATGGCAATCCAATACAGACAGGAAGAT...CACACACTCCTTCTCTAAGATTCCTTGTAGCTGATATCTCATGGAAAAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328559.11
CDS-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATATACTAGTTGGGAATTaGGATCTTCAAGTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNILVGN*DLQVVE
Trigger: TTCAACCACTTGAAGATCCAAATTCCCAACTAGTAT...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp CAGACAAGCCAGAACATAAAACGAGAGCAAATACTTTTCTGCCATTCAACAGTTATACTAGTTGGGAATTaGGATCTTCAAGTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: QTSQNIKREQILFCHSTVILVGN*DLQVVE
Trigger: TTCAACCACTTGAAGATCCAAATTCCCAACTAGTAT...AACTGTTGAATGGCAGAAAAGTATTTGCTCTCGTTTTATGTTCTGGCTTGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp AGGAAGAGAGGCAATGTGAAGTTGTCAAGCCTGAAGAACTTATCACAATACAATGCTGTTAAGTTTACATaGCGAATGAGAAAGATCACT +
Preference number: 5 (lower is better)
Translates to: RKRGNVKLSSLKNLSQYNAVKFT*RMRKIT
Trigger: AGTGATCTTTCTCATTCGCAATGTAAACTTAACAGC...ATTGTATTGTGATAAGTTCTTCAGGCTTGACAACTTCACATTGCCTCTCTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp ATTTGGATCTTCAAGTGGTTGAAGGAATGTTACATGGGTGGTATTAAGAGATTTTGTCTAGGTTTCAAGTaGCAAAACTTAACAGCGTAC +
Preference number: 5 (lower is better)
Translates to: IWIFKWLKECYMGGIKRFCLGFK*QNLTAY
Trigger: GTACGCTGTTAAGTTTTGCAACTTGAAACCTAGACA...AAATCTCTTAATACCACCCATGTAACATTCCTTCAACCACTTGAAGATCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS GCA 90 bp TTGCCAGTAAGATATTGTCCCCCAAATGTACTTATCCTGTTTTTGTaGATTATAAGCTTTGTTCAGTTTATAGTTTCTAGGCCCATTACT +
Preference number: 5 (lower is better)
Translates to: LPVRYCPPNVLILFL*IISFVQFIVSRPIT
Trigger: AGTAATGGGCCTAGAAACTATAAACTGAACAAAGCTTATAATGCACAAAAACAGGATAAGTACATTTGGGGGACAATATCTTACTGGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS-3UTR CAA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAACAAATTTTAAGTGTCTaGCTTTGGGACATGGAGAAT +
Preference number: 5 (lower is better)
Translates to: ISIACYHVWHTSKFMISEQILSV*LWDMEN
Trigger: ATTCTCCATGTCCCAAAGCAAGACACTTAAAATTTG...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS-3UTR CAA 90 bp ATAAGCATAGCATGTTACCATGTATGGCACACGTCAAAGTTTATGATTTCTGAAGCTGTTAAGTTTACATaGCGAATGAGAAAGATCACT +
Preference number: 5 (lower is better)
Translates to: ISIACYHVWHTSKFMISEAVKFT*RMRKIT
Trigger: AGTGATCTTTCTCATTCGCAATGTAAACTTAACAGC...TTCAGAAATCATAAACTTTGACGTGTGCCATACATGGTAACATGCTATGCTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000505916.6
CDS CAA 72 bp GCACTGCAGGGCAGCTTCCGTATCCTGCCGGATGCCTaGTCCATACAAGTACATGAGCCCAAGTGCACCCTG +
Preference number: 6 (lower is better)
Translates to: ALQGSFRILPDA*SIQVHEPKCTL
Trigger: CAGGGTGCACTTGGGCTCATGTACTTGTATGGACAAGGCATCCGGCAGGATACGGAAGCTGCCCTGCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 72 bp CAAGCCAAGCTGAAGACACCTTGCGTGGTAGAAGGATaGCATTGCCATGCCTCTGCCGATGAACTCCGGGAG +
Preference number: 6 (lower is better)
Translates to: QAKLKTPCVVEG*HCHASADELRE
Trigger: CTCCCGGAGTTCATCGGCAGAGGCATGGCAATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 72 bp ATCCCTGGTGATGCCCAAGCCAAGCTGAAGACACCTTaGGTGGTAGAAGGATGCCATTGCCATGCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: IPGDAQAKLKTP*VVEGCHCHASA
Trigger: GGCAGAGGCATGGCAATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTTGGCTTGGGCATCACCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS TCA 72 bp CCGTATCCTGCCGGATGCCTTGTCCATACAAGTACATaGGCCCAAGTGCACCCTGGGACTCCAGATTCCCAT +
Preference number: 6 (lower is better)
Translates to: PYPAGCLVHTST*AQVHPGTPDSH
Trigger: ATGGGAATCTGGAGTCCCAGGGTGCACTTGGGCTCATGTACTTGTATGGACAAGGCATCCGGCAGGATACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 72 bp AAGCTGAAGACACCTTGCGTGGTAGAAGGATGCCATTaGCATGCCTCTGCCGATGAACTCCGGGAGACAGTC +
Preference number: 6 (lower is better)
Translates to: KLKTPCVVEGCH*HASADELRETV
Trigger: GACTGTCTCCCGGAGTTCATCGGCAGAGGCATGGCAATGGCATCCTTCTACCACGCAAGGTGTCTTCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 72 bp GCTTCTCTTAAGCACTGCAGGGCAGCTTCCGTATCCTaGCGGATGCCTTGTCCATACAAGTACATGAGCCCA +
Preference number: 6 (lower is better)
Translates to: ASLKHCRAASVS*RMPCPYKYMSP
Trigger: TGGGCTCATGTACTTGTATGGACAAGGCATCCGGCAGGATACGGAAGCTGCCCTGCAGTGCTTAAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS GCA 72 bp TACATCAAGATGGGTCAAGTCACCCAGCACAAGTGTTaGCACTTAGTGGGACCTGGTGACACTGCCCACAGT +
Preference number: 6 (lower is better)
Translates to: YIKMGQVTQHKC*HLVGPGDTAHS
Trigger: ACTGTGGGCAGTGTCACCAGGTCCCACTAAGTGGCAACACTTGTGCTGGGTGACTTGACCCATCTTGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS TCA 72 bp CGCCTAGATAGAACACCAACCACCAACTCCAGGACGTaGACATTCTTTACTAGGACACCAAGACCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RLDRTPTTNSRT*TFFTRTPRPSS
Trigger: GGAGGAGGGTCTTGGTGTCCTAGTAAAGAATGTTCACGTCCTGGAGTTGGTGGTTGGTGTTCTATCTAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS TCA 72 bp TTCTCCATGTCATTTTCCACAGCATCGCATTCACCATaGGACCTGTTTGCACGTCCTGTCTGGCTATGGGTT +
Preference number: 6 (lower is better)
Translates to: FSMSFSTASHSP*DLFARPVWLWV
Trigger: AACCCATAGCCAGACAGGACGTGCAAACAGGTCTCATGGTGAATGCGATGCTGTGGAAAATGACATGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS GCA 72 bp CAGCGAAGTGCAAAGAGAGACTCTATTCCCACCAGGTaGTCATTAGGAAAAGCATCCTTCTCTCATCGCCTA +
Preference number: 6 (lower is better)
Translates to: QRSAKRDSIPTR*SLGKASFSHRL
Trigger: TAGGCGATGAGAGAAGGATGCTTTTCCTAATGAGCACCTGGTGGGAATAGAGTCTCTCTTTGCACTTCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CAA 90 bp CCAGGTTGGCCTAGGCTGAGGGTAGTGAGACAGCAAACTCAGTTGTaGCTACACTTTTGTATTTACTCCTTGGCATTCCACTGTTATGGC +
Preference number: 6 (lower is better)
Translates to: PGWPRLRVVRQQTQL*LHFCIYSLAFHCYG
Trigger: GCCATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTTGCTGTCTCACTACCCTCAGCCTAGGCCAACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CAA 90 bp TCTCCATGTCATTTTCCACAGCATCGCATTCACCATGAGACCTGTTaGCACGTCCTGTCTGGCTATGGGTTTATACATCAAGATGGGTCA +
Preference number: 6 (lower is better)
Translates to: SPCHFPQHRIHHETC*HVLSGYGFIHQDGS
Trigger: TGACCCATCTTGATGTATAAACCCATAGCCAGACAGGACGTGCAAACAGGTCTCATGGTGAATGCGATGCTGTGGAAAATGACATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CCA 72 bp GCCAGTAAAATGCCTTTTCTAACTCCTTGGGCTCCTTaGTTGAGTAATACAGCCCGAGCATACTTTGAGCCT +
Preference number: 6 (lower is better)
Translates to: ASKMPFLTPWAP*LSNTARAYFEP
Trigger: AGGCTCAAAGTATGCTCGGGCTGTATTACTCAACCAAGGAGCCCAAGGAGTTAGAAAAGGCATTTTACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS CAA 90 bp AGTCCAGGTTGGCCTAGGCTGAGGGTAGTGAGACAGCAAACTCAGTaGTTGCTACACTTTTGTATTTACTCCTTGGCATTCCACTGTTAT +
Preference number: 6 (lower is better)
Translates to: SPGWPRLRVVRQQTQ*LLHFCIYSLAFHCY
Trigger: ATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTTGCTGTCTCACTACCCTCAGCCTAGGCCAACCTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS GCA 72 bp ATTTTCCACAGCATCGCATTCACCATGAGACCTGTTTaGACGTCCTGTCTGGCTATGGGTTTATACATCAAG +
Preference number: 6 (lower is better)
Translates to: IFHSIAFTMRPV*TSCLAMGLYIK
Trigger: CTTGATGTATAAACCCATAGCCAGACAGGACGTGCAAACAGGTCTCATGGTGAATGCGATGCTGTGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS GCA 72 bp TTGAGCCTTCACACTAGCTTTGGGATTTCCATTGTCTaGTGCGATAAGCCACAGTCTTTCAGCTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: LSLHTSFGISIV*CDKPQSFSFLI
Trigger: AATGAGGAAGCTGAAAGACTGTGGCTTATCGCAGCAGACAATGGAAATCCCAAAGCTAGTGTGAAGGCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS CAA 72 bp TGGCCTAGGCTGAGGGTAGTGAGACAGCAAACTCAGTaGTTGCTACACTTTTGTATTTACTCCTTGGCATTC +
Preference number: 6 (lower is better)
Translates to: WPRLRVVRQQTQ*LLHFCIYSLAF
Trigger: GAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTTGCTGTCTCACTACCCTCAGCCTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CAA 90 bp CCTGCTACACGCCTGGTGAAACTCCAGTTACTTGCCAGTAAGATATaGTCCCCCAAATGTACTTATCCTGTTTTTGTGCATTATAAGCTT +
Preference number: 6 (lower is better)
Translates to: PATRLVKLQLLASKI*SPKCTYPVFVHYKL
Trigger: AAGCTTATAATGCACAAAAACAGGATAAGTACATTTGGGGGACAATATCTTACTGGCAAGTAACTGGAGTTTCACCAGGCGTGTAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS CAA 72 bp GGTAGTGAGACAGCAAACTCAGTTGTTGCTACACTTTaGTATTTACTCCTTGGCATTCCACTGTTATGGCTT +
Preference number: 6 (lower is better)
Translates to: GSETANSVVATL*YLLLGIPLLWL
Trigger: AAGCCATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTTGCTGTCTCACTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CAA 72 bp AAATTTCATCTTATAGTAATACTCCACGAGATTCCCTaGAGCATAGACGTTTCCGCGTTCTGCTGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: KFHLIVILHEIP*SIDVSAFCCFS
Trigger: AGAGAAGCAGCAGAACGCGGAAACGTCTATGCTCAAGGGAATCTCGTGGAGTATTACTATAAGATGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
CDS CAA 90 bp GTGAGACAGCAAACTCAGTTGTTGCTACACTTTTGTATTTACTCCTaGGCATTCCACTGTTATGGCTTACTTTCACCAATCAGAAACAAG +
Preference number: 6 (lower is better)
Translates to: VRQQTQLLLHFCIYS*AFHCYGLLSPIRNK
Trigger: CTTGTTTCTGATTGGTGAAAGTAAGCCATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTTGCTGTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS TCA 72 bp CTCCTAGCTGGTAAGTTGCTTGATGGTCTTTCTCCTTaGTTTCTTCAAACTGTTCTAATGCTTCTTCATACC +
Preference number: 6 (lower is better)
Translates to: LLAGKLLDGLSP*FLQTVLMLLHT
Trigger: GGTATGAAGAAGCATTAGAACAGTTTGAAGAAATCAAGGAGAAAGACCATCAAGCAACTTACCAGCTAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328559.11
ENST00000505916.6
ENST00000510776.5
ENST00000511404.1
CDS GCA 72 bp AAGCCTGGCATTGTTCTCTTTAACAAACGTGACATCTaGTTTCTGTTTTCTAGAAGCATGTCCTTAAGTCCT +
Preference number: 6 (lower is better)
Translates to: KPGIVLFNKRDI*FLFSRSMSLSP
Trigger: AGGACTTAAGGACATGCTTCTAGAAAACAGAAAGCAGATGTCACGTTTGTTAAAGAGAACAATGCCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510776.5
CDS CAA 72 bp CCATCTCAAAACAACAACAACAACAACAAACAATACTaGTTGATTGGTTTCACACTAACCCTGCTCATGGCC +
Preference number: 6 (lower is better)
Translates to: PSQNNNNNNKQY*LIGFTLTLLMA
Trigger: GGCCATGAGCAGGGTTAGTGTGAAACCAATCAACAAGTATTGTTTGTTGTTGTTGTTGTTGTTTTGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510776.5
CDS CCA 72 bp AAACAACAACAACAACAACAAACAATACTTGTTGATTaGTTTCACACTAACCCTGCTCATGGCCAAGTAGAG +
Preference number: 6 (lower is better)
Translates to: KQQQQQQTILVD*FHTNPAHGQVE
Trigger: CTCTACTTGGCCATGAGCAGGGTTAGTGTGAAACCAATCAACAAGTATTGTTTGTTGTTGTTGTTGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510776.5
CDS CAA 72 bp CAAACTCAGTTGTTGCTACACTTTTGTATTTACTCCTaGGCATTCCACTGTTATGGCTTACTTTCACCAATC +
Preference number: 6 (lower is better)
Translates to: QTQLLLHFCIYS*AFHCYGLLSPI
Trigger: GATTGGTGAAAGTAAGCCATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CAA 90 bp TCACTGACGATTTGCTACCAGATAAATGAGCAATTTCACAGATTCTaGCGGGAAAACTCAAAAGGACTAATGATTAACCACTTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: SLTICYQINEQFHRF*RENSKGLMINHFLE
Trigger: TTCAAGGAAGTGGTTAATCATTAGTCCTTTTGAGTTTTCCCGCAAGAATCTGTGAAATTGCTCATTTATCTGGTAGCAAATCGTCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510776.5
CDS CCA 72 bp AAACTCAGTTGTTGCTACACTTTTGTATTTACTCCTTaGCATTCCACTGTTATGGCTTACTTTCACCAATCA +
Preference number: 6 (lower is better)
Translates to: KLSCCYTFVFTP*HSTVMAYFHQS
Trigger: TGATTGGTGAAAGTAAGCCATAACAGTGGAATGCCAAGGAGTAAATACAAAAGTGTAGCAACAACTGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328559.11
ENST00000510776.5
CDS CAA 90 bp TACTTGCCAGTAAGATATTGTCCCCCAAATGTACTTATCCTGTTTTaGTGCATTATAAGCTTTGTTCAGTTTATAGTTTCTAGGCCCATT +
Preference number: 6 (lower is better)
Translates to: YLPVRYCPPNVLILF*CIISFVQFIVSRPI
Trigger: AATGGGCCTAGAAACTATAAACTGAACAAAGCTTATAATGCACAAAAACAGGATAAGTACATTTGGGGGACAATATCTTACTGGCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS GCA 72 bp GCTCACCTCACAAATCTGACAACAGTATCTCTACACTaGCGTTCTTTAAACATCATTAAAAGATATTGTGAA +
Preference number: 6 (lower is better)
Translates to: AHLTNLTTVSLH*RSLNIIKRYCE
Trigger: TTCACAATATCTTTTAATGATGTTTAAAGAACGGCAGTGTAGAGATACTGTTGTCAGATTTGTGAGGTGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS GCA 72 bp CTTTCACCACACAAATATCCCACTACATATGCTAACTaGAGTATTTATGTTCAAAACTGTAAGAACGTGTCT +
Preference number: 6 (lower is better)
Translates to: LSPHKYPTTYAN*SIYVQNCKNVS
Trigger: AGACACGTTCTTACAGTTTTGAACATAAATACTGCAGTTAGCATATGTAGTGGGATATTTGTGTGGTGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505916.6
CDS CAA 72 bp ATTTGCTACCAGATAAATGAGCAATTTCACAGATTCTaGCGGGAAAACTCAAAAGGACTAATGATTAACCAC +
Preference number: 6 (lower is better)
Translates to: ICYQINEQFHRF*RENSKGLMINH
Trigger: GTGGTTAATCATTAGTCCTTTTGAGTTTTCCCGCAAGAATCTGTGAAATTGCTCATTTATCTGGTAGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510776.5
CDS CAA 72 bp AGGTATTTAAATAATAATTGCAAGTCAAGCCTGGCATaGTTCTCTTTAACAAACGTGACATCTGCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: RYLNNNCKSSLA*FSLTNVTSAFC
Trigger: ACAGAAAGCAGATGTCACGTTTGTTAAAGAGAACAATGCCAGGCTTGACTTGCAATTATTATTTAAATACCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510776.5