RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRP1B (Homo sapiens)

Ensembl gene IDs: ENSG00000168702

Ensembl transcript IDs: ENST00000389484.8, ENST00000434794.1, ENST00000437977.5, ENST00000442974.1, ENST00000486364.1

Found 802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTaGTTATGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTT +
Preference number: 1 (lower is better)
Translates to: PEYQSNWHSISTLHF*LWEDHCSSTTWKAL
Trigger: AAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR CCA 90 bp AAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTaGCTATTTATCTCGAGACTGAGGGAGAATAAAAGGTCTTATTCC +
Preference number: 1 (lower is better)
Translates to: KYLRCKYPMPCCALG*LFISRLRENKRSYS
Trigger: GGAATAAGACCTTTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR GCA 90 bp TTAATCTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATaGAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATC +
Preference number: 1 (lower is better)
Translates to: LIFHKMDVTGKKYLR*KYPMPCCALGWLFI
Trigger: GATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCTGAATCGATCTTTATaGGCACAAAGAAGAGAGTTG +
Preference number: 2 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTLNRSL*AQRREL
Trigger: CAACTCTCTTCTTTGTGCCCATAAAGATCGATTCAG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTGATGCTGAACTTGTaGGAGCTATATATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: MQVPNALLCSRLAIYLETVMLNL*ELYIFS
Trigger: GCTGAAAATATATAGCTCTCACAAGTTCAGCATCAC...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR TCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGATTTTCAGCAGAGTCTaGATCGATCTTTATGGGCAC +
Preference number: 2 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLIFSRV*IDLYGH
Trigger: GTGCCCATAAAGATCGATTCAGACTCTGCTGAAAAT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGTGATGCTGAACTTGTaGGAGCTATATATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: MPCCALGWLFISRLRENKVMLNL*ELYIFS
Trigger: GCTGAAAATATATAGCTCTCACAAGTTCAGCATCAC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR GCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTTATTCCATAGCAAGTaGAGTCGGCCAACTTTCGGT +
Preference number: 2 (lower is better)
Translates to: WEDHCSSTTWKALEYILDLFHSK*SRPTFG
Trigger: ACCGAAAGTTGGCCGACTGCACTTGCTATGGAATAA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATATTTTCAGCAGAGTCTaGATCGATCTTTATGGGCAC +
Preference number: 2 (lower is better)
Translates to: WEDHCSSTTWKALEYILDIFSRV*IDLYGH
Trigger: GTGCCCATAAAGATCGATTCAGACTCTGCTGAAAAT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTATTTATCTCGAGACTaGGGGAGAATAAAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYYLSRD*GRIKGL
Trigger: AAGACCTTTTATTCTCCCTCAGTCTCGAGATAAATA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCTGAATCGATCTTTATaGGCACAAAGAAGAGAGTTG +
Preference number: 2 (lower is better)
Translates to: WEDHCSSTTWKALEYILDLNRSL*AQRREL
Trigger: CAACTCTCTTCTTTGTGCCCATAAAGATCGATTCAG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR GCA 72 bp GAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTaGTCTAGGCTGGCTATTTATCTCGAGACTGAGGGA +
Preference number: 3 (lower is better)
Translates to: EIPKMQVPNALL*SRLAIYLETEG
Trigger: TCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR GCA 72 bp CACAAAATGGATGTGACTGGGAAGAAATACCTAAGATaGAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: HKMDVTGKKYLR*KYPMPCCALGW
Trigger: CCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR CCA 72 bp AGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTaGCTATTTATCTCGAGACTGAGGGAGAATAAAAGG +
Preference number: 3 (lower is better)
Translates to: RCKYPMPCCALG*LFISRLRENKR
Trigger: CCTTTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCAGCATTGTTGTAAATaGTACTGTAGTGCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: CKYPMPCCALGWLFISRLQHCCK*YCSAVL
Trigger: AAGAACTGCACTACAGTACAATTTACAACAATGCTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCAGAGATTCTCCTCGTaGATTAAGTACAACCAAAAA +
Preference number: 3 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAQRFSS*IKYNQK
Trigger: TTTTTGGTTGTACTTAATCAACGAGGAGAATCTCTG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR TCA 72 bp CAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTaGTTATGGGAAGATCATTGTTCTTCTACAACTTGG +
Preference number: 3 (lower is better)
Translates to: QSNWHSISTLHF*LWEDHCSSTTW
Trigger: CCAAGTTGTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCAGCATTGTTGTAAATaGTACTGTAGTGCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLQHCCK*YCSAVL
Trigger: AAGAACTGCACTACAGTACAATTTACAACAATGCTG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGCAGAGATTCTCCTCGTaGATTAAGTACAACCAAAAA +
Preference number: 3 (lower is better)
Translates to: CESYIFSAESESIFMGTKQRFSS*IKYNQK
Trigger: TTTTTGGTTGTACTTAATCAACGAGGAGAATCTCTG...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGGAGGGATGCGCGCGTaGGGGAGAGAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAGGMRA*GREEAE
Trigger: CTCTGCCTCCTCTCTCCCGCACGCGCGCATCCCTCC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCCCGGTAAGGAAGCCTaGGCTGGAGACTGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTPGKEA*AGDCSA
Trigger: CGCCGAGCAGTCTCCAGCGCAGGCTTCCTTACCGGG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCCATCACAGGCCCAGTaGCCTGGGATGCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREPSQAQ*PGMHLP
Trigger: TGGCAGATGCATCCCAGGCCACTGGGCCTGTGATGG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGCTCCAGGCCGAGTCTaGTCCACAGTGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREAPGRV*STVCLV
Trigger: CACCAGACACACTGTGGACCAGACTCGGCCTGGAGC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTTCCCCTGACTGGGTaGGCTGCAAGACACTGTGGC +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREFPLTG*AARHCG
Trigger: GCCACAGTGTCTTGCAGCTCACCCAGTCAGGGGAAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCCTGTCACACAGCCATaGTCTGGGAATGCAACGCCC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLPVTQP*SGNATP
Trigger: GGGCGTTGCATTCCCAGAGCATGGCTGTGTGACAGG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGCAGGATGTGGAAGGTaGAGGGATGCGCGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLAGCGR*RDARVR
Trigger: CCGCACGCGCGCATCCCTCCACCTTCCACATCCTGC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGACTGTCAGGCCTTCTaGAGTAGCCAGGCCATGCTC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLDCQAF*SSQAML
Trigger: GAGCATGGCCTGGCTACTCCAGAAGGCCTGACAGTC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCAGGCACGAGAGCCCTaGCAGCTGAACATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLQAREP*QLNMSA
Trigger: TGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAGAGTCTGGTGCAGTTaGGGCCATTCAGCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRERVWCS*GHSAAL
Trigger: TAGGGCAGCTGAATGGCCCCAACTGCACCAGACTCT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCGGGCGGCGCTGTGTGTaGAAGCTTGAAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSGRRCV*KLESTG
Trigger: CCCAGTGCTTTCAAGCTTCCACACACAGCGCCGCCC...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCACAGTTTGGCCCAGTaGAACCCAGTGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETHSLAQ*NPVHSC
Trigger: GCAGCTGTGCACTGGGTTTCACTGGGCCAAACTGTG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCAGAGTTTCTCTGGCTaGAGGCAGACTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREQSFSG*RQTEVS
Trigger: TGACACCTCAGTCTGCCTGCAGCCAGAGAAACTCTG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGCCTTTCACACTGTGTaGCTGACCAGTTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLAFHTV*LTSWWS
Trigger: GCTCCACCAACTGGTCAGGCACACAGTGTGAAAGGC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCAGCCTTCTCCTGCCTaGAGCAGGATGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETQPSPA*SRMWKV
Trigger: CACCTTCCACATCCTGCTCCAGGCAGGAGAAGGCTG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGCTCCCGATGTTTTATaGGCACGGCTGAGTGACTTG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREAPDVL*ARLSDL
Trigger: CAAGTCACTCAGCCGTGCCCATAAAACATCGGGAGC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGACGCCCGTGTGTCTTaGCTTTTCAATGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLDARVS*LFNAGY
Trigger: GTACCCTGCATTGAAAAGTCAAGACACACGGGCGTC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGAGGCAGAGCGTGTGTaGGCGCGAGCGAGACGCCCG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNEAERV*ARARRP
Trigger: CGGGCGTCTCGCTCGCGCTCACACACGCTCTGCCTC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGGCTGCAGGCAGACTaGGGTGTCATTAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSWLQAD*GVISTR
Trigger: CCTTGTGCTAATGACACCTCAGTCTGCCTGCAGCCA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGAGAGCCCTGGCAGCTaGACATGTCAGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCESPGS*TCQQHR
Trigger: CCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTC...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCCAATCGACAGCAAGTaGATTGGGGACCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTPIDSK*IGDRCV
Trigger: AACACAGCGGTCCCCAATGCACTTGCTGTCGATTGG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTAACCCAGTGCACAGCTaGAGGTGGGTCTCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLANPVHS*RWVSLE
Trigger: TTCTAGGGAGACCCACCTGCAGCTGTGCACTGGGTT...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGCGGCAGGGGCCGCTTaGAGCCTGGAATCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDAAGAA*SLESSG
Trigger: GCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCGAAACTCGGACATTGTaGTCGCCCGGTAAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSETRTL*SPGKEA
Trigger: GGCTTCCTTACCGGGCGACCACAATGTCCGAGTTTC...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGCTGCTCTTTGGGGCTaGCCTTTCACACTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFAALWG*PFTLCA
Trigger: GGCACACAGTGTGAAAGGCCAGCCCCAAAGAGCAGC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGCTGCTCTTTGGGGCTaGCCTTTCACACTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKAALWG*PFTLCA
Trigger: GGCACACAGTGTGAAAGGCCAGCCCCAAAGAGCAGC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCGATTCAAGGGGCACTTaGTTTCTACCTCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSDSRGT*FLPPRD
Trigger: GTCCCGAGGAGGTAGAAATCAAGTGCCCCTTGAATC...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCAGTCAGCCTTCTCCTaGCTGGAGCAGGATGTGGAA +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFQSAFS*LEQDVE
Trigger: TTCCACATCCTGCTCCAGGCAGGAGAAGGCTGACTG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGGAGTAGCCAGGCCATaGTCCACAACCACTTCAATG +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAGVARP*STTTSM
Trigger: CATTGAAGTGGTTGTGGAGCATGGCCTGGCTACTCC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCCTGACTGGGTGAGCTaGAAGACACTGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETPDWVS*KTLWLI
Trigger: GATAAGCCACAGTGTCTTGCAGCTCACCCAGTCAGG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTCCGTCTCTTTTGCTaGAGGTTCCTAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTFRLFC*RFLAGL
Trigger: TAGCCCAGCTAGGAACCTGCAGCAAAAGAGACGGAA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTTCTTCCGTCTCTTTTaGTGCAGGTTCCTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLFFRLF*CRFLAG
Trigger: CCCAGCTAGGAACCTGCAGCAAAAGAGACGGAAGAA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTCTGACAGACCCGTTTaGATGTGCTCTGTCAGACCA +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTSDRPV*MCSVRP
Trigger: TGGTCTGACAGAGCACATGCAAACGGGTCTGTCAGA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGACTTGCCATGAGGAATaGAGCGGCGATTATAGCATG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRETCHEE*SGDYSM
Trigger: CATGCTATAATCGCCGCTGCATTCCTCATGGCAAGT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTTGGGGCCATTCAGCTaGCCTACGTTGATAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLLGPFS*PTLIEY
Trigger: GTACTCTATCAACGTAGGGCAGCTGAATGGCCCCAA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCCACGGTCAGCACCCTaGCAATCGGCAATAATCCCG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCPRSAP*QSAIIP
Trigger: CGGGATTATTGCCGATTGCCAGGGTGCTGACCGTGG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCACACAGCCATGCTCTaGGAATGCAACGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETHTAML*ECNAHF
Trigger: GAAATGGGCGTTGCATTCCCAGAGCATGGCTGTGTG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCCAAAGCAATGGCCCTaGGGTGTTCCATGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLPKQWP*GVPWLL
Trigger: CAGGAGCCATGGAACACCCCAGGGCCATTGCTTTGG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCCACCATTGTTTAGTTaGCAGGAATTGCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREPPLFS*QELLPC
Trigger: GCAAGGCAGCAATTCCTGCCAACTAAACAATGGTGG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGAGCGCAGCCTGCTGTaGAAAGCTCATCGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFERSLL*KAHRFH
Trigger: ATGGAAGCGATGAGCTTTCCACAGCAGGCTGCGCTC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCGACAGCAAGTGCATTaGGGACCGCTGTGTTATGAA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLRQQVH*GPLCYE
Trigger: TTCATAACACAGCGGTCCCCAATGCACTTGCTGTCG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTGCCTGACCAGTTGGTaGAGCATAGACACACAGGTA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLCLTSW*SIDTQV
Trigger: TACCTGTGTGTCTATGCTCCACCAACTGGTCAGGCA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTGTGCCTGACCAGTTaGTGGAGCATAGACACACAG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETVCLTS*WSIDTQ
Trigger: CTGTGTGTCTATGCTCCACCAACTGGTCAGGCACAC...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTAGAGTCTTCCGACTCTaGGAAGCTTTTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETRVFRL*EAFSSL
Trigger: CAGGCTGGAAAAAGCTTCTCAGAGTCGGAAGACTCT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCAAAAATCTGCCGATTaGATCCATCCATCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTQKSAD*IHPSRP
Trigger: AGGCCTGGATGGATGGATTCAATCGGCAGATTTTTG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCATAACATGAGCACTTaGCTGTGTGCTTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTHNMST*LCACAA
Trigger: AGCAGCACAAGCACACAGTCAAGTGCTCATGTTATG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCCACTGCTAGCCCTCTaGTACTCTGAATATCTCTTG +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLPLLAL*YSEYLL
Trigger: CAAGAGATATTCAGAGTATCAGAGGGCTAGCAGTGG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTCTTGTGGCCCCTTCTaGCAGACCCGTTTGCATGTG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCSCGPF*QTRLHV
Trigger: CACATGCAAACGGGTCTGTCAGAAGGGGCCACAAGA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCTGGTTGCATCGTGCTaGTCTTGGAATACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLALVASC*SWNTSP
Trigger: GGGACTTGTATTCCAAGATCAGCACGATGCAACCAG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCCATCACACTGCCATTaGGTATTTAGAAGACACCGC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTPSHCH*VFRRHR
Trigger: GCGGTGTCTTCTAAATACTCAATGGCAGTGTGATGG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTAAGTCCCGTATGTATTaGTGCATTGCTGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTKSRMY*CIAGYR
Trigger: CCTGTAGCCAGCAATGCATCAATACATACGGGACTT...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGCTGACAGAGACTACTaGATTAGAGCCATCATACAG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREADRDY*IRAIIQ
Trigger: CTGTATGATGGCTCTAATTCAGTAGTCTCTGTCAGC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAATACAAGTCCCATCTaGACAGCGGAACTCAACCGT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLNTSPI*TAELNR
Trigger: ACGGTTGAGTTCCGCTGTGCAGATGGGACTTGTATT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTGGGGCCATTCAGCTaGCCTACGTTGATAGAGTAC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETLGPFS*PTLIEY
Trigger: GTACTCTATCAACGTAGGGCAGCTGAATGGCCCCAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCCTTTCACACTGTGTaGCTGACCAGTTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCAFHTV*LTSWWS
Trigger: GCTCCACCAACTGGTCAGGCACACAGTGTGAAAGGC...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGGGCCGCTTGGAGCCTaGAATCGAGCGGCGTCATTT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNGPLGA*NRAASF
Trigger: AAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCACATCTCTCCACTTTaGCGACATTCCCGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAHISPL*RHSRSQ
Trigger: CTGACTACGGGAATGTCGCCAAAGTGGAGAGATGTG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGAAAGCTTCATCAAGTaGGGGCACGCACAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCESFIK*GHAQAA
Trigger: TGCTGCCTGTGCGTGCCCCCACTTGATGAAGCTTTC...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCCTCATAGTCGATaGAGATGCCATTCGGCCATG +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTFPHSR*RCHSAM
Trigger: CATGGCCGAATGGCATCTCCATCGACTATGAGGAAA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTGGTTATCGTTTCTGTaGCATCATTCTTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTWLSFL*HHSCGP
Trigger: GGGGCCACAAGAATGATGCCACAGAAACGATAACCA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGCGGCGATTATAGCATaGCTTGAAGCCTCTTCGACA +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAAAIIA*LEASST
Trigger: TGTCGAAGAGGCTTCAAGCCATGCTATAATCGCCGC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGCGGAACTCAACCGTaGCACAGGTTGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLSGTQP*HRLKLY
Trigger: GTAAAGTTTCAACCTGTGCCACGGTTGAGTTCCGCT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCATCACATGTATTATTaGGAGCGCAGCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAHHMYY*ERSLLW
Trigger: CCACAGCAGGCTGCGCTCCCAATAATACATGTGATG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTGCAACGAAACTGGCTaGCTGTGCAGTTGGATAAGC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLACNETG*LCSWIS
Trigger: GCTTATCCAACTGCACAGCCAGCCAGTTTCGTTGCA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGTCTTACCACAGTTTaGCCCAGTGAAACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSCLTTV*PSETQC
Trigger: GCACTGGGTTTCACTGGGCCAAACTGTGGTAAGACA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGCCTGACCAGTTGGTaGAGCATAGACACACAGGTA +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSCLTSW*SIDTQV
Trigger: TACCTGTGTGTCTATGCTCCACCAACTGGTCAGGCA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTTTGTAACTGCTGCTaGGTAGACAGATGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREFCNCC*VDRCVN
Trigger: GTTCACACATCTGTCTACTCAGCAGCAGTTACAAAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTTATCAAAGCAAGAGTaGACACAGCCCACCTCATCA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLLSKQE*TQPTSS
Trigger: TGATGAGGTGGGCTGTGTTCACTCTTGCTTTGATAA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAACTATCACACCGCCAGTaGTCGGGAATACAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKLSHRQ*SGIQLL
Trigger: CAACAACTGTATTCCCGATCACTGGCGGTGTGATAG...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGACAGTGATCTTCATCTaGATTGTCACCGCATTCATC +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRETVIFI*IVTAFI
Trigger: GATGAATGCGGTGACAATTCAGATGAAGATCACTGT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTACAGAACACTGCCAATaGTGGAGAGCTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETTEHCQ*WRAQSQ
Trigger: CTGACTTTGAGCTCTCCATCATTGGCAGTGTTCTGT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCTGTGTGTGGAAGCTTaGAAGCACTGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNLCVEA*KHWVLP
Trigger: GGGGAGGACCCAGTGCTTTCAAGCTTCCACACACAG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGCCATCTCTTGGGGATaGAGCGATTATTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAAISWG*SDYSGI
Trigger: AATGCCAGAATAATCGCTGCATCCCCAAGAGATGGC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTCATCAGAGTCGCAGTaGCATTTGCTGCTAATGCAT +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTSSESQ*HLLLMH
Trigger: ATGCATTAGCAGCAAATGGCACTGCGACTCTGATGA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCATCTGAGAGCGATTTaGAGCCATTTGGGTTATCAG +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTHLRAI*SHLGYQ
Trigger: CTGATAACCCAAATGGCTGCAAATCGCTCTCAGATG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAACACATTCTATTTATaGGACTGCCATTGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLNTFYL*DCHWVG
Trigger: GCCGACCCAATGGCAGTCGCATAAATAGAATGTGTT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGAAACTGGCTGGCTGTaGAGTTGGATAAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFETGWL*SWISKS
Trigger: GGACTTGCTTATCCAACTGCACAGCCAGCCAGTTTC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCATCTTCCCCATATTTaGAGTCTTCATGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTHLPHI*SLHGHH
Trigger: GTGATGGCCATGAAGACTGCAAATATGGGGAAGATG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCCCCTGGCATTCCATATaGATCGACTTCACATGCATG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSPWHSI*IDFTCM
Trigger: CATGCATGTGAAGTCGATCCATATGGAATGCCAGGG...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGATCATCTTTCAGGATaGTTTCTCTCTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREDHLSG*FLSLCH
Trigger: ATGGCACAGAGAGAGAAACCATCCTGAAAGATGATC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGGGAGCCATCTAGTTTaGCCACTTCGATTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKGSHLV*PLRFGP
Trigger: TGGACCAAATCGAAGTGGCCAAACTAGATGGCTCCC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAAGCTGGGCTAAGTTTTaGTCTGCCCACCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKSWAKF*SAHHSF
Trigger: GAAACTGTGGTGGGCAGACCAAAACTTAGCCCAGCT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTCTTATTCCGTAGGATaGTGGGGTTTCTTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLASYSVG*WGFFRL
Trigger: GAGACGGAAGAAACCCCACCATCCTACGGAATAAGA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCGCTAGCACATGTGGATaGTCATCTTCTGACATGGTG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSASTCG*SSSDMV
Trigger: CACCATGTCAGAAGATGACCATCCACATGTGCTAGC...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATGCATCTGCACAGTCTaGATCCTCGTCACAAACCCA +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKCICTV*ILVTNP
Trigger: TGGGTTTGTGACGAGGATCCAGACTGTGCAGATGCA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTATTTGTTAAGAGTCTaGTGCAGTTGGGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREYLLRV*CSWGHS
Trigger: TGAATGGCCCCAACTGCACCAGACTCTTAACAAATA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTGCATATACCGGATTaGAGTAATTTGTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRELHIPD*SNLLAQ
Trigger: CTGGGCCAACAAATTACTCCAATCCGGTATATGCAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTGTTGTGCTCTAGGCTaGCTATTTATCTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLCCALG*LFISRL
Trigger: CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCACAGCTGGGATAAATaGACACATTTGTTGGTACCA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLHSWDK*THLLVP
Trigger: TGGTACCAACAAATGTGTTCATTTATCCCAGCTGTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCATCACTTCCCAAGTTaGAGCCAGTCCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNHHFPS*SQSCSD
Trigger: GTCGCTGCAGGACTGGCTTCAACTTGGGAAGTGATG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTATTGAAGCAGTTTACTaGATCCTCATCGCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETIEAVY*ILIASV
Trigger: GACGGAAGCGATGAGGATTCAGTAAACTGCTTCAAT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGGACCGCTGTGTTATaGACTACCTTAATGTCACTT +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETGTAVL*TTLMSL
Trigger: AAGTGACATTAAGGTAGTTCATAACACAGCGGTCCC...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGGACTTTGTGTCTATaGGATCCATCCATGTTGCTA +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETGTLCL*DPSMLL
Trigger: TAGCAACATGGATGGATCTCATAGACACAAAGTCCC...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCATGTGTGTCACAGTTaGGTTCATCAGAATTGTCTC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLHVCHS*VHQNCL
Trigger: GAGACAATTCTGATGAACTCAACTGTGACACACATG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGCAGTTGGCCTCGTCTaGTGCATCTGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELAVGLV*CICTVW
Trigger: CCAGACTGTGCAGATGCATCAGACGAGGCCAACTGC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCCGCCTGGATTAAACTaGGTACTCCAAATAATCATA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREPPGLN*VLQIII
Trigger: TATGATTATTTGGAGTACTCAGTTTAATCCAGGCGG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTCTTCTATATGGGAATaGTCCCCAACAACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSSSIWE*SPTTVQ
Trigger: CTGGACTGTTGTTGGGGATCATTCCCATATAGAAGA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCAGGTTCCTCCATTTTaGCAAAAATCCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLQVPPF*QKSSQT
Trigger: AGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCAATGCTTCTTGTGCTaGTATGATCAGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAQCFLC*YDQTCC
Trigger: GCAGCAAGTCTGATCATATCAGCACAAGAAGCATTG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTATTTTCAGCAGAGTCTaGATCGATCTTTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTIFSRV*IDLYGH
Trigger: GTGCCCATAAAGATCGATTCAGACTCTGCTGAAAAT...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATTCTGCAGGTCTGGCTaGATGTACCATAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKFCRSG*MYHKQH
Trigger: GTGCTGTTTATGGTACATGCAGCCAGACCTGCAGAA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCATGCTCTGGGAATaGAACGCCCATTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNAMLWE*NAHFRK
Trigger: CTTGCGGAAATGGGCGTTGCATTCCCAGAGCATGGC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCAACAGAACAGTGGTTaGTACAGCCTCCATTGTTCA +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETQQNSG*YSLHCS
Trigger: TGAACAATGGAGGCTGTAGCAACCACTGTTCTGTTG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGCTCACATACTTGGCTaGACTTTAGATGATTGCTAC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLAHILG*TLDDCY
Trigger: GTAGCAATCATCTAAAGTGCAGCCAAGTATGTGAGC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTACTGTGTGCTTGTGCTaGTCACATACTTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCTVCLC*SHTWLH
Trigger: GTGCAGCCAAGTATGTGAGCAGCACAAGCACACAGT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGAGCACTTGACTGTGTaGTTGTGCTGCTCACATACT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFEHLTV*LCCSHT
Trigger: AGTATGTGAGCAGCACAAGCACACAGTCAAGTGCTC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCATAGTCGATGGAGATaGCATTCGGCCATGCTATTC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFHSRWR*HSAMLF
Trigger: GAATAGCATGGCCGAATGGCATCTCCATCGACTATG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAACCCAATGCCCTGTTGTaGTCTAGGCTGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKPNALL*SRLAIY
Trigger: ATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGG...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGGCCAATTAGGAAACTaGTGGTGTCAGCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAGQLGN*WCQQSR
Trigger: TCTACTTTGCTGACACCACCAGTTTCCTAATTGGCC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTACCTTGTTGCTTTCGTaGATCATAAATCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTTLLLS*IINLKP
Trigger: GGGCTTCAGATTTATGATCCACGAAAGCAACAAGGT...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCTACCTGGCATGTTCTaGCTGTGCAAGTTTGATTGG +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFLPGMF*LCKFDW
Trigger: CCAATCAAACTTGCACAGCCAGAACATGCCAGGTAG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTTCCGCAAGAAAACTaGTCTACCTGGCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETFPQEN*STWHVL
Trigger: CAGAACATGCCAGGTAGACCAGTTTTCTTGCGGAAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAACAGGCCCAGTGGCCTaGGATGCATCTGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLTGPVA*DASATG
Trigger: TCCAGTGGCAGATGCATCCCAGGCCACTGGGCCTGT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTAGTACAATTGATCTaGGCTTCATCACTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRELVQLI*ASSLKS
Trigger: GGACTTCAGTGATGAAGCCCAGATCAATTGTACTAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAAGAATTCCATATCTTaGGTCCAAAGCAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLKNSIS*VQSNGP
Trigger: AGGGCCATTGCTTTGGACCCAAGATATGGAATTCTT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAGGATTGGGAGCCTGTaGCTGGCGACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELRIGSL*LATGMV
Trigger: TACCATCCCAGTCGCCAGCCACAGGCTCCCAATCCT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGATCCATTTTGTCACTTaGTTCAAGAGGTATTCCCCT +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREIHFVT*FKRYSP
Trigger: AGGGGAATACCTCTTGAACCAAGTGACAAAATGGAT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAAAGTTCACAGCTATTaGTGTCATTGGCAACAGCTA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREKVHSY*CHWQQL
Trigger: TAGCTGTTGCCAATGACACCAATAGCTGTGAACTTT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTACACTGAAATCGGCCTaGCTGACATCTAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETTLKSA*LTSKFR
Trigger: CCTGAATTTAGATGTCAGCCAGGCCGATTTCAGTGT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTCTTTTTATCGCAGTTaGCCTCGTCTGATGCATCTG +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLASFYRS*PRLMHL
Trigger: CAGATGCATCAGACGAGGCCAACTGCGATAAAAAGA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAAACACAGTCCCCATTaGCACAGAGGAAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLKHSPH*HRGNLS
Trigger: TGAAAGATTTCCTCTGTGCCAATGGGGACTGTGTTT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTCAGTGTACCATCCATaGCTGCTTCTTCTATATGGG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSSVYHP*LLLLYG
Trigger: CCCATATAGAAGAAGCAGCCATGGATGGTACACTGA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTCCTTCATAGCGCGTTaGACAGACACATTCAACACT +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLASFIAR*TDTFNT
Trigger: AGTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGTCAACCTCACATTTTaGTCCTTCATAGCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKVNLTF*SFIARW
Trigger: CCAACGCGCTATGAAGGACCAAAATGTGAGGTTGAC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCTGAATCGATCTTTATaGGCACAAAGAAGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRELNRSL*AQRREL
Trigger: CAACTCTCTTCTTTGTGCCCATAAAGATCGATTCAG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTACAGCACATTCATCTTaGTCTTTACAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLATAHSS*SLQLLP
Trigger: TGGGAGAAGCTGTAAAGATCAAGATGAATGTGCTGT...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTATAATGTGTTGGTGTaGAAGTCCAGAGTTAAACCG +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTYNVLV*KSRVKP
Trigger: CGGTTTAACTCTGGACTTTCACACCAACACATTATA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAACCATCAGGGTGGCACTaGAATTCATTTCCGTTACAA +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKPSGWH*NSFPLQ
Trigger: TTGTAACGGAAATGAATTTCAGTGCCACCCTGATGG...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTCCATTCCCTGAACTaGTCCAATAAAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREFHSLN*SNKACF
Trigger: AAAACAAGCTTTATTGGATCAGTTCAGGGAATGGAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATAAGGACAACCTTCTCTaGGCCATCCAAGCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNKDNLL*AIQASL
Trigger: AAGGCTCGCTTGGATGGCTCAGAGAAGGTTGTCCTT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCCCAAAGACTGCAACTaGAAACATATCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAPKDCN*KHIHIA
Trigger: AGCAATGTGGATATGTTTTCAGTTGCAGTCTTTGGG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTGGATGGTCATCTTCTaGCATGGTGATGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCWMVIF*HGDDSF
Trigger: GAAGCTGTCATCACCATGTCAGAAGATGACCATCCA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTCACATAACTTGCCATaGGGAATGCAGCGGCGATTA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCSHNLP*GMQRRL
Trigger: TAATCGCCGCTGCATTCCTCATGGCAAGTTATGTGA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCCTCACAATCTTTCTaGCCATCGCATATCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSSQSF*PSHIQV
Trigger: TACCTGGATATGCGATGGTCAGAAAGATTGTGAGGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGCTACAGGGAAAGCCTaGAGAGCATTCATCAATGTC +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLATGKA*RAFINV
Trigger: GACATTGATGAATGCTCTTCAGGCTTTCCCTGTAGC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAACATTTGAATTGACCTaGCAGGCAGACATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKTFELT*QADMCV
Trigger: GACACACATGTCTGCCTGTCAGGTCAATTCAAATGT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTACACTGGAATTCATaGGGTCCACAAGTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLRELHWNS*GPQVFL
Trigger: TAAAAAGACTTGTGGACCTCATGAATTCCAGTGTAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTTATTTCTGCATCTGTaGGGTCTCGTGGATGGACAA +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFLFLHL*GLVDGQ
Trigger: TTGTCCATCCACGAGACCTCACAGATGCAGAAATAA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATTCACATCTTTCTCCTaGATAACTGGGCCAACAGTG +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKFTSFS*ITGPTV
Trigger: CACTGTTGGCCCAGTTATTCAGGAGAAAGATGTGAA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGATGCGTTCACGTAATTaGAATTCTGTCACCAATTTG +
Preference number: 4 (lower is better)
Translates to: YPMPCCALGWLFISRLREMRSRN*NSVTNL
Trigger: CAAATTGGTGACAGAATTTCAATTACGTGAACGCAT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTGGATCGACTTCACATaGATGGCTTCTGACTGTTGG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCWIDFT*MASDCW
Trigger: CCAACAGTCAGAAGCCATGCATGTGAAGTCGATCCA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGTGCCATCTATCTTCTaGCGGCCAATTAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCVPSIF*RPIRKL
Trigger: CAGTTTCCTAATTGGCCGGCAGAAGATAGATGGCAC...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCCCAGTGGCCTGGGATaGATCTGCCACTGGAACATC +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNPSGLG*ICHWNI
Trigger: GATGTTCCAGTGGCAGATGCATCCCAGGCCACTGGG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTTGACTGTGTGCTTGTaGTGCTCACATACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCLTVCL*CSHTWL
Trigger: CAGCCAAGTATGTGAGCAGCACAAGCACACAGTCAA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTTTGCCATCATTAGCTaGACAAGGATTGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCFAIIS*TRIGSL
Trigger: CAGGCTCCCAATCCTTGTGCAGCTAATGATGGCAAA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTACCACCATCCAGGTTaGATCTATTTATGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLYHHPG*IYLWFH
Trigger: ATGGAACCATAAATAGATGCAACCTGGATGGTGGTA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATAGCCACCCAGTCAACTaGAATGTCCCTGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNSHPVN*NVPGPF
Trigger: AAAAGGCCCAGGGACATTGCAGTTGACTGGGTGGCT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGGTCCAGCTGGCATGTaGCACCATTGTAACAGTAGC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNGPAGM*HHCNSS
Trigger: GCTACTGTTACAATGGTGGCACATGCCAGCTGGACC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTATGATCAGACTTGCTaGTCTTTGGGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCYDQTC*SLGLAF
Trigger: AAAGGCCAGCCCCAAAGAGCAGCAAGTCTGATCATA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATTATTCCATAGCAAGTaGAGTCGGCCAACTTTCGGT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKLFHSK*SRPTFG
Trigger: ACCGAAAGTTGGCCGACTGCACTTGCTATGGAATAA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTTATTCCATAGCAAGTaGAGTCGGCCAACTTTCGGT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFLFHSK*SRPTFG
Trigger: ACCGAAAGTTGGCCGACTGCACTTGCTATGGAATAA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCCCAATGCCCTGTTGTaGTCTAGGCTGGCTATTTAT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLPNALL*SRLAIY
Trigger: ATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCCATCCAACCATTAACTaGATCCACCACAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSHPTIN*IHHNSS
Trigger: AGAGGAATTGTGGTGGATCCAGTTAATGGTTGGATG...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCTGTGCAAGTTTGATTaGATTCATCTTCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLLCKFD*IHLHCS
Trigger: GGAGCAATGAAGATGAATCCAATCAAACTTGCACAG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGGTCACACAATCGTATaGTACCATTGCAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLGHTIV*YHCNLF
Trigger: AAAAAGGTTGCAATGGTACCATACGATTGTGTGACC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATCCACTTATTGGCTTTaGACAATGTGTTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKSTYWL*TMCWSS
Trigger: GGAGGACCAACACATTGTCCAAAGCCAATAAGTGGA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATATTCCGTAGGATGGTaGGGTTTCTTCCGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKYSVGW*GFFRLF
Trigger: AAAGAGACGGAAGAAACCCCACCATCCTACGGAATA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGTGGCATCATTCTTGTaGCCCCTTCTGACAGACCCG +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKVASFL*PLLTDP
Trigger: CGGGTCTGTCAGAAGGGGCCACAAGAATGATGCCAC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTCCCATTGGCTGATGTaGAATATCGGAACGAAGAAT +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLASHWLM*NIGTKN
Trigger: ATTCTTCGTTCCGATATTCCACATCAGCCAATGGGA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAATTCACTCTCCCATTaGGAGTTAAAAGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLNSLSH*ELKGTS
Trigger: ACTTGTGCCTTTTAACTCCCAATGGGAGAGTGAATT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCACAATCTATGTTCTaGTTGCATCGTGCTGATCTT +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETAQSMF*LHRADL
Trigger: AAGATCAGCACGATGCAACCAGAACATAGATTGTGC...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCTAAAGACAAGTCTCTaGGAAACTTCAGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETLKTSL*ETSAFC
Trigger: GCAAAAGGCTGAAGTTTCCCAGAGACTTGTCTTTAG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGTTTTGCAACGAAACTaGCTGGCTGTGCAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLVLQRN*LAVQLD
Trigger: ATCCAACTGCACAGCCAGCCAGTTTCGTTGCAAAAC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTACACTGGAAATAGTCTaGAGAACAGCTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETTLEIV*RTAVFR
Trigger: CCTGAAAACAGCTGTTCTCCAGACTATTTCCAGTGT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTGTAGAAAATTCCGCCTaGATTAAACTGAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTVENSA*IKLSTP
Trigger: TGGAGTACTCAGTTTAATCCAGGCGGAATTTTCTAC...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAGAGTCTGGTGCAGTTaGGGCCATTCAGCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELRVWCS*GHSAAL
Trigger: TAGGGCAGCTGAATGGCCCCAACTGCACCAGACTCT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCAGTGTACCATCCATaGCTGCTTCTTCTATATGGG +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSVYHP*LLLLYG
Trigger: CCCATATAGAAGAAGCAGCCATGGATGGTACACTGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGTGCACAGCTGCAGGTaGGTCTCCCTAGAACTGATG +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKVHSCR*VSLELM
Trigger: CATCAGTTCTAGGGAGACCCACCTGCAGCTGTGCAC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCCTTCATAGCGCGTTaGACAGACACATTCAACACT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSFIAR*TDTFNT
Trigger: AGTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCTGAATCGATCTTTATaGGCACAAAGAAGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLLNRSL*AQRREL
Trigger: CAACTCTCTTCTTTGTGCCCATAAAGATCGATTCAG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGAATACCAGAGCAACTaGCACAGCATTTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLEYQSN*HSISTL
Trigger: GAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGAGACACAAGTCACGTaGTCGTGGCAAAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLETQVT*SWQRNS
Trigger: TGAATTTCTTTGCCACGATCACGTGACTTGTGTCTC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCACATGCATGGCTTCTaGCTGTTGGTTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLHMHGF*LLVEFF
Trigger: AAAGAACTCAACCAACAGTCAGAAGCCATGCATGTG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAACAATTCCTCTGGGATaGGACATTTCACCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKTIPLG*DISPSK
Trigger: TTTAGAGGGTGAAATGTCTCATCCCAGAGGAATTGT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCCAACCAGCAGGAGAATaGATCTCTTCTTTAGTACAA +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSQPAGE*ISSLVQ
Trigger: TTGTACTAAAGAAGAGATTCATTCTCCTGCTGGTTG...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCAATATCCACTCCTCTaGTTTCAGAACGTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFQYPLL*FQNVLH
Trigger: ATGCAAGACGTTCTGAAATCAGAGGAGTGGATATTG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGCCCTCTGATACTCTaGATATCTCTTGAAATAACA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLSPLIL*ISLEIT
Trigger: TGTTATTTCAAGAGATATTCAGAGTATCAGAGGGCT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTTCTATACCTTGACATaGCATACGGTTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAFYTLT*HTVLLE
Trigger: CTCCAAAAGAACCGTATGTCATGTCAAGGTATAGAA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCAAGAGGTATTCCCCTaGTTCCTTCATGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCQEVFP*FLHEQS
Trigger: ACTCTGTTCATGAAGGAATCAGGGGAATACCTCTTG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACATCCACATTGCTTCCTaGCAGCACCATCTCGCGATT +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYIHIAS*QHHLAI
Trigger: AATCGCGAGATGGTGCTGTCAGGAAGCAATGTGGAT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGTGTCTGGTGATGGATaGGGTGGTAGAGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKVSGDG*GGRACP
Trigger: TGGACAAGCTCTACCACCTCATCCATCACCAGACAC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTCATAAACAGCCAAACTaGGGAAAGTCCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELHKQPN*GKSLAQ
Trigger: CTGGGCCAGGGACTTTCCTCAGTTTGGCTGTTTATG...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTATGATTCCCATTGGCTaGTGTGGAATATCGGAACGA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCMIPIG*CGISER
Trigger: TCGTTCCGATATTCCACATCAGCCAATGGGAATCAT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCTTGAGAACATCCACTaGCTTTCTTACTCAAACATT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLLENIH*LSYSNI
Trigger: AATGTTTGAGTAAGAAAGTCAGTGGATGTTCTCAAG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTACAAATATCCAGCTTaGGGATCTAAAGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTYKYPA*GSKDKS
Trigger: AGACTTGTCTTTAGATCCTCAAGCTGGATATTTGTA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTATGGGCACGGCTGAGTaGCTTGGTTTTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELMGTAE*LGFPIS
Trigger: ACTGATGGGAAAACCAAGTCACTCAGCCGTGCCCAT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTTGGAACACCGGAACTaGTCTTTGGAACAACTTGTC +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCLEHRN*SLEQLV
Trigger: GACAAGTTGTTCCAAAGATCAGTTCCGGTGTTCCAA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTTTTGCACCGAAACTaGTCTTCCTTACATTCAGTC +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETFLHRN*SSLHSV
Trigger: GACTGAATGTAAGGAAGATCAGTTTCGGTGCAAAAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAAGCTTACCACCACAGTaGTCTTCATCTGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKSLPPQ*SSSELS
Trigger: TGACAATTCAGATGAAGATCACTGTGGTGGTAAGCT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTCCACATTTATACATTaGTGGGAACATGTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSSTFIH*WEHVPN
Trigger: GTTTGGCACATGTTCCCATCAATGTATAAATGTGGA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAACTTCTTGTGCTGATATaGTCAGACTTGCTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKLLVLI*SDLLLF
Trigger: AAAGAGCAGCAAGTCTGATCATATCAGCACAAGAAG...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTATTTTCAGCAGAGTCTaGATCGATCTTTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFIFSRV*IDLYGH
Trigger: GTGCCCATAAAGATCGATTCAGACTCTGCTGAAAAT...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTATTTATCTCGAGACTaGGGGAGAATAAAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLYLSRD*GRIKGL
Trigger: AAGACCTTTTATTCTCCCTCAGTCTCGAGATAAATA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTATTTATCTCGAGACTaGGGGAGAATAAAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTYLSRD*GRIKGL
Trigger: AAGACCTTTTATTCTCCCTCAGTCTCGAGATAAATA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTAGTCCAAGACACCATTaGACAGCTGGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSPRHH*TAGINE
Trigger: TTCATTTATCCCAGCTGTGCAATGGTGTCTTGGACT...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGAAGTCACAAAAATCTaGCGATTGAATCCATCCATC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAEVTKI*RLNPSI
Trigger: GATGGATGGATTCAATCGGCAGATTTTTGTGACTTC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGCCATGCTATTCCCATaGTTACAAGGACAACCTTCT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLAMLFP*LQGQPS
Trigger: AGAAGGTTGTCCTTGTAAGCATGGGAATAGCATGGC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTAGTAACTCCATCTTCTaGCAAATATCCATGGGCACA +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSNSIF*QISMGT
Trigger: TGTGCCCATGGATATTTGGCAGAAGATGGAGTTACT...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAAGCTTCCCTGTCAAATaGTCCAGGCCGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLSFPVK*SRPSLV
Trigger: GACCAGACTCGGCCTGGAGCATTTGACAGGGAAGCT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTTATGGCACCACAAATaGTGTCACTTTCATCTAACC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLALWHHK*CHFHLT
Trigger: GGTTAGATGAAAGTGACAGCATTTGTGGTGCCATAA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAATTGGGAGCGCAGCCTaGTGTGGAAAGCTCATCGCT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLIGSAA*CGKLIA
Trigger: AGCGATGAGCTTTCCACAGCAGGCTGCGCTCCCAAT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTATCCCATTGCACATTTaGTCCGACTGTAGGCATATT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFIPLHI*SDCRHI
Trigger: AATATGCCTACAGTCGGAGCAAATGTGCAATGGGAT...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTCATCAATCCCATTaGACATTTGCTCCGACTGTA +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAIHQSH*TFAPTV
Trigger: TACAGTCGGAGCAAATGTGCAATGGGATTGATGAAT...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACAACCCAGTGCACAGCTaGAGGTGGGTCTCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNNPVHS*RWVSLE
Trigger: TTCTAGGGAGACCCACCTGCAGCTGTGCACTGGGTT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTATTCATCAGCTATCTTaGTATTCAAGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTIHQLS*YSSPFL
Trigger: GAGGAATGGACTTGAATACCAAGATAGCTGATGAAT...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATACACACCCGGCCTCCTaGGATAGCCAAGCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDTHPAS*DSQAKC
Trigger: ACACTTTGCTTGGCTATCCCAGGAGGCCGGGTGTGT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTTGGGTCCAAAGCAATaGCCCTGGGGTGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNLGPKQ*PWGVPW
Trigger: CCATGGAACACCCCAGGGCCATTGCTTTGGACCCAA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGCCTGTGGCTGGCGACTaGGATGGTATATCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKPVAGD*DGISEG
Trigger: ACCTTCAGATATACCATCCCAGTCGCCAGCCACAGG...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTTGGGAGCCTGTGGCTaGCGACTGGGATGGTATATC +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNLGACG*RLGWYI
Trigger: GATATACCATCCCAGTCGCCAGCCACAGGCTCCCAA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGAGTTTTCCCCTGACTaGGTGAGCTGCAAGACACTG +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELEFSPD*VSCKTL
Trigger: CAGTGTCTTGCAGCTCACCCAGTCAGGGGAAAACTC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGCTGCAGGTTCCTAGCTaGGCTAAGTTTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKLQVPS*AKFWSA
Trigger: GGCAGACCAAAACTTAGCCCAGCTAGGAACCTGCAG...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTAAAAGGCACAAGTCATaGCAGCCTCCATTCAATAAT +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETKRHKS*QPPFNN
Trigger: ATTATTGAATGGAGGCTGCCATGACTTGTGCCTTTT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGCGGAACAAGCAAATTaGTTCCAAGAGCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFAEQAN*FQEQEE
Trigger: TTCTTCTTGCTCTTGGAACCAATTTGCTTGTTCCGC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCCACAGTCGTCATCATaGTCACAAACAAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFPQSSS*SQTNCL
Trigger: CAAGCAATTTGTTTGTGACCATGATGACGACTGTGG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCCGTCATCCTTCAGTTaGAATCCAGGCCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNPSSFS*NPGQHL
Trigger: CAAATGCTGGCCTGGATTCCAACTGAAGGATGACGG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTCATGCAGAGATGTTTaGAGACATCAGGTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSSCRDV*RHQVVY
Trigger: ATAGACAACCTGATGTCTCCAAACATCTCTGCATGA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCAATGTACATGTCTGTaGCTTACAGTTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTQCTCL*LTVFFI
Trigger: GATGAAGAAAACTGTAAGCCACAGACATGTACATTG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCAAATATTTTCCTTCTaGACACACACAAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLQIFSF*THTSGP
Trigger: GGGGCCACTTGTGTGTGTCCAGAAGGAAAATATTTG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGTGCACAGCTGCAGGTaGGTCTCCCTAGAACTGATG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNVHSCR*VSLELM
Trigger: CATCAGTTCTAGGGAGACCCACCTGCAGCTGTGCAC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATTGTCTTACCACAGTTTaGCCCAGTGAAACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNCLTTV*PSETQC
Trigger: GCACTGGGTTTCACTGGGCCAAACTGTGGTAAGACA...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTTCCATCATCCCCAATaGTACATGATTCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: CKYPMPCCALGWLFISRLFHHPQ*YMIQNS
Trigger: TGAATTCTGAATCATGTACCATTGGGGATGATGGAA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGTGTGCCTGACCAGTTaGTGGAGCATAGACACACAG +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELVCLTS*WSIDTQ
Trigger: CTGTGTGTCTATGCTCCACCAACTGGTCAGGCACAC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTGTTGTGCTCTAGGCTaGCTATTTATCTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLCCALG*LFISRL
Trigger: CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCATTTGTTGGCTTTGTTaGGTCTATCATAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSICWLC*VYHKAR
Trigger: CCTGGCTTTATGATAGACCCAACAAAGCCAACAAAT...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTAATAGAGATTTCGAGTaGGCCAGTCAATCGCCATTT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCNRDFE*ASQSPF
Trigger: AAATGGCGATTGACTGGCTCACTCGAAATCTCTATT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCTTTGGTCTTTTGCATaGCCTGCCATCACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNLWSFA*PAITSQ
Trigger: TTGGGAAGTGATGGCAGGTCATGCAAAAGACCAAAG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCAGGACAGCTATGATTaGAGCAGTTTACTGAATCCT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCQDSYD*SSLLNP
Trigger: AGGATTCAGTAAACTGCTTCAATCATAGCTGTCCTG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATAGTAGAGTTTTCCCCTaGCTGGGTGAGCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDSRVFP*LGELQD
Trigger: GTCTTGCAGCTCACCCAGTCAGGGGAAAACTCTACT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGCAGTTCTTTTCATCTaGAGCATCTGCACAATCTAT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFAVLFI*SICTIY
Trigger: ATAGATTGTGCAGATGCTTCAGATGAAAAGAACTGC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATATATCCACACTGCGGTaGCTCATCAGAGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDISTLR*LIRAIS
Trigger: GGAGATGGCTCTGATGAGTCACCGCAGTGTGGATAT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCCAACACGGCCAATATaGGGATACTCGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDPTRPI*GYSQQS
Trigger: TGACTGCTGCGAGTATCCTCATATTGGCCGTGTTGG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTACAGTCCATCTCATCTaGACCATCAGCACAATCATA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCTVHLI*TISTII
Trigger: TATGATTGTGCTGATGGTTCAGATGAGATGGACTGT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAATGGACAAAGAAATTTaGCACACATATCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKMDKEI*HTYQGL
Trigger: AAGCCCCTGATATGTGTGTCAAATTTCTTTGTCCAT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGCATCCTTGCTCATCTaGACCATCTCCGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNASLLI*TISAVI
Trigger: GATGACTGCGGAGATGGTTCAGATGAGCAAGGATGC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGCATCCTTGCTCATCTaGACCATCTCCGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLASLLI*TISAVI
Trigger: GATGACTGCGGAGATGGTTCAGATGAGCAAGGATGC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACACAGAACACTGCCAATaGTGGAGAGCTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYTEHCQ*WRAQSQ
Trigger: CTGACTTTGAGCTCTCCATCATTGGCAGTGTTCTGT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACATCCATGTGTGTTTCTaGAGGTCTGGCTGCATGTAC +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYIHVCF*RSGCMY
Trigger: GTACATGCAGCCAGACCTGCAGAAACACACATGGAT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAGGGGTGGTCTTTCATaGCTCAGCAATGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELRGGLS*LSNVTS
Trigger: TGAGGTGACATTGCTGAGGCATGAAAGACCACCCCT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCATCGTATGGTACCATTaGAACCTTTTTCATCACTAC +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSIVWYH*NLFHHY
Trigger: GTAGTGATGAAAAAGGTTGCAATGGTACCATACGAT...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTCATTAGCACAAGGATaGTTGGGTGGTCCACACAAG +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYSLAQG*LGGPHK
Trigger: CTTGTGTGGACCACCCAAGCATCCTTGTGCTAATGA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGATGGTATCATTTTCTaGATGGAAATCTATTCCCAC +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLADGIIF*MEIYSH
Trigger: GTGGGAATAGATTTCCATGCAGAAAATGATACCATC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATAGGCCTTTCTCTGGGTaGACAGCTATAGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNRPFSG*TAIDLG
Trigger: ACCAAGATCTATAGCTGTGCACCCAGAGAAAGGCCT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGAAATACAGCTTCTCTaGACGGTAGTCGATAGTAAG +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCEIQLL*TVVDSK
Trigger: CTTACTATCGACTACCGTGCAGAGAAGCTGTATTTC...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTCTCCATCACATAACTTaGCATGAGGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELLHHIT*HEECSG
Trigger: GCCGCTGCATTCCTCATGGCAAGTTATGTGATGGAG...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGCAGTCTGTGTTATTaGAGTTCTTTTCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSCSLCY*SSFHLK
Trigger: CTTCAGATGAAAAGAACTGCAATAACACAGACTGCA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGACCTCCACTGGGAATaGACCTGCCATTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELDLHWE*TCHFCT
Trigger: TGTGCAAAAATGGCAGGTGCATTCCCAGTGGAGGTC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTATGTATTGATGCATTaGTGGCTACAGGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLYVLMH*WLQGKP
Trigger: AGGCTTTCCCTGTAGCCAGCAATGCATCAATACATA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTAGTGGGCTTTATTTTTaGACCGAAACTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSGLYF*TETDLP
Trigger: AGGAAGATCAGTTTCGGTGCAAAAATAAAGCCCACT...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGAGTTCTCTTCATCACTaGCATCCACACAGTCATGAA +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLSSLHH*HPHSHE
Trigger: TTCATGACTGTGTGGATGGCAGTGATGAAGAGAACT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAATATTCTGTTATTTCTaGATCTGTGAGGTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKIFCYF*ICEVSW
Trigger: CCACGAGACCTCACAGATGCAGAAATAACAGAATAT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGCTATTCTGCATCCTTaGTCATCTGAACCATCTCCG +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYAILHP*SSEPSP
Trigger: CGGAGATGGTTCAGATGAGCAAGGATGCAGAATAGC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACAGCCACCCAGTCAACTaGAATGTCCCTGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNSHPVN*NVPGPF
Trigger: AAAAGGCCCAGGGACATTGCAGTTGACTGGGTGGCT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGGTCCAGCTGGCATGTaGCACCATTGTAACAGTAGC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDGPAGM*HHCNSS
Trigger: GCTACTGTTACAATGGTGGCACATGCCAGCTGGACC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAAAGAAATACCTAAGATaGAAGTACCCAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKKKYLR*KYPMPC
Trigger: ACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTAATGAACACATTTGTTaGTACCAAGGCAAGCAATGT +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETNEHIC*YQGKQC
Trigger: ACATTGCTTGCCTTGGTACCAACAAATGTGTTCATT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATCAGCTGTTGGCAATTaGATAACAGTTCCTGACAAT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKSAVGN*ITVPDN
Trigger: ATTGTCAGGAACTGTTATCCAATTGCCAACAGCTGA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACCCACCACAATTCCTCTaGGATGAGACATTTCACCCT +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYPPQFL*DETFHP
Trigger: AGGGTGAAATGTCTCATCCCAGAGGAATTGTGGTGG...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGACAGTCCGAAAGGGTaGTTCAACTCTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLDSPKG*FNSLPL
Trigger: CAGTGGGAGAGAGTTGAACCACCCTTTCGGACTGTC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGAAAACTGGTCTACCTaGCATGTTCTGGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYENWST*HVLAVQ
Trigger: TTGCACAGCCAGAACATGCCAGGTAGACCAGTTTTC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCTTTTGCATACGAATTaGGTTAGTGGCTCACAAGTT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFLLHTN*VSGSQV
Trigger: AACTTGTGAGCCACTAACCCAATTCGTATGCAAAAG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCCAACAGGAAAACTTaGTTTTGTGGTCACACAATC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSNRKT*FCGHTI
Trigger: GATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCCCTGGCACAAACATTaGTCCCTTTCTCTCTTACTC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNPWHKH*SLSLLL
Trigger: GAGTAAGAGAGAAAGGGACCAATGTTTGTGCCAGGG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCAAGAAGAATCACAGTaGAATTCATCACGTCCATCC +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCQEESQ*NSSRPS
Trigger: GGATGGACGTGATGAATTCCACTGTGATTCTTCTTG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGCATCATCTCCACATaGATTCACATTATCTTCACA +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSCIIST*IHIIFT
Trigger: TGTGAAGATAATGTGAATCCATGTGGAGATGATGCA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTTCCATCATCCCCAATaGTACATGATTCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSFHHPQ*YMIQNS
Trigger: TGAATTCTGAATCATGTACCATTGGGGATGATGGAA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGTAGTGTAAGGGGTTaGGTTAATCTTCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSCSVRG*VNLPQN
Trigger: ATTTTGTGGAAGATTAACCCAACCCCTTACACTACA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
3UTR CAA 72 bp CCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTaGATTATGGGAAGATCATTGTTCTTCTACAACTTG +
Preference number: 4 (lower is better)
Translates to: PEQLAQHFDSPL*IMGRSLFFYNL
Trigger: CAAGTTGTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAATTCTTCAGCTCAATaGGTCCAGCCAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELNSSAQ*VQPVSL
Trigger: AAGGCTGACTGGCTGGACTCATTGAGCTGAAGAATT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGCCAAGGCAAGCAATGTaGTTCAAGGGGCACTTGATT +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKPRQAM*FKGHLI
Trigger: AATCAAGTGCCCCTTGAATCACATTGCTTGCCTTGG...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTCCAGCTTTACATATGTaGGGTAGTGCTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELPALHM*GSASPG
Trigger: TCCTGGAGAAGCACTACCTCACATATGTAAAGCTGG...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATACACCCATGCTTTGTTaGTGCATCTCCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDTPMLC*CISLYS
Trigger: GGAGTACAGGGAGATGCATCAACAAAGCATGGGTGT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGCAGGTCTTCTTGTCTaGAGAAAGCTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYAGLLV*RKLHQV
Trigger: CACTTGATGAAGCTTTCTTCAGACAAGAAGACCTGC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGAATGCCATCACAGGTaGGCTGGTAGTCAATGCACT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDECHHR*AGSQCT
Trigger: AGTGCATTGACTACCAGCTCACCTGTGATGGCATTC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTTGCTGGTATACACTaGCCATTGGAACACCGGAAC +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKFAGIH*PLEHRN
Trigger: GTTCCGGTGTTCCAATGGTCAGTGTATACCAGCAAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCCGCCTGGATTAAACTaGGTACTCCAAATAATCATA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCPPGLN*VLQIII
Trigger: TATGATTATTTGGAGTACTCAGTTTAATCCAGGCGG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACAGTTGCTACAGTGGTTaGCTTCACATCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYSCYSG*LHIFLL
Trigger: CAGGAGAAAGATGTGAAGTCAACCACTGTAGCAACT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAATGCGTTCACGTAATTaGAATTCTGTCACCAATTTG +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKMRSRN*NSVTNL
Trigger: CAAATTGGTGACAGAATTTCAATTACGTGAACGCAT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCGATTTGGTCCAGATTaGTGTCTATCCAGTATATGT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCRFGPD*CLSSIC
Trigger: ACATATACTGGATAGACAGCAATCTGGACCAAATCG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTATATTCGGTCCCCTCTaGAGGAACAATTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELIFGPL*RNNSLS
Trigger: GGAGAGTGAATTGTTCCTGCAGAGGGGACCGAATAT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGCTTATAGAAATGTGTaGAGTCTGTGTTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFAYRNV*SLCYCS
Trigger: ACTGCAATAACACAGACTGCACACATTTCTATAAGC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAATCACCACAGTCATCTTaGCCATTACATCTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKSPQSS*PLHLKF
Trigger: AAACTTAAGATGTAATGGGCAAGATGACTGTGGTGA...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCTTTTTACAAGGCCTTaGTTTATATGTCAGCTTACC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFLFTRP*FICQLT
Trigger: GGTAAGCTGACATATAAAGCAAGGCCTTGTAAAAAG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTAAGAAATACCTAAGATaGAAGTACCCAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCKKYLR*KYPMPC
Trigger: ACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTCGTCATACCCATCTaGGCAGTCCAAGACACCATT +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKFVIPI*AVQDTI
Trigger: AATGGTGTCTTGGACTGCCCAGATGGGTATGACGAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTCACATACAGAACCGTTaGAATTACAAACAAAGATCC +
Preference number: 4 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFHIQNR*NYKQRS
Trigger: GGATCTTTGTTTGTAATTCCAACGGTTCTGTATGTG...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCACAAAGCCATCTCTTaGGGATGCAGCGATTATTCT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNHKAIS*GCSDYS
Trigger: AGAATAATCGCTGCATCCCCAAGAGATGGCTTTGTG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGGAACAACAGAACAGTaGTTGCTACAGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKGTTEQ*LLQPPL
Trigger: CAATGGAGGCTGTAGCAACCACTGTTCTGTTGTTCC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTGTCTGTCCAGTAGATaGTATCATTTTCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLCLSSR*YHFLHG
Trigger: TCCATGCAGAAAATGATACCATCTACTGGACAGACA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGCAAGGCCGGTTCTCATaGTTATCGTTTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKQGRFS*LSFLWH
Trigger: ATGCCACAGAAACGATAACCATGAGAACCGGCCTTG...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCAGCAGCACAGGTTATaGCACCACAAATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDQQHRL*HHKCCH
Trigger: GTGACAGCATTTGTGGTGCCATAACCTGTGCTGCTG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGGTGCTTCATCAGAATaGTCAGGACAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNGASSE*SGQSKS
Trigger: AGACTTTGACTGTCCTGACCATTCTGATGAAGCACC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGGCTGGCTGTGCAGTTaGATAAGCAAGTCCTATTAT +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYGWLCS*ISKSYY
Trigger: ATAATAGGACTTGCTTATCCAACTGCACAGCCAGCC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGCAAGTAGGAGAAGCTaGCTCACAGCTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKASRRS*LTAFLI
Trigger: GATGAGAAAAGCTGTGAGCCAGCTTCTCCTACTTGC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTCAAGTCGATCACACTaGAGATCCATAGGGATGCAT +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYSSRSH*RSIGMH
Trigger: ATGCATCCCTATGGATCTCCAGTGTGATCGACTTGA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTAACCAATTACTAAGGTaGTTATCAAAGTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: MQVPNALLCSRLAIYLETNQLLR*LSKSPR
Trigger: TCTTGGTGACTTTGATAACCACCTTAGTAATTGGTT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCAACCAATTACTAAGGTaGTTATCAAAGTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSNQLLR*LSKSPR
Trigger: TCTTGGTGACTTTGATAACCACCTTAGTAATTGGTT...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTGTTCTTCTACAACTTaGAAGGCCCTTGAATATATT +
Preference number: 4 (lower is better)
Translates to: EEIPKMQVPNALLCSRLACSSTT*KALEYI
Trigger: AATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATAGTAAACCAATTTGTTaGCTAGGTCTAGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNSKPIC*LGLVPV
Trigger: CACTGGCACTAGACCTAGTCAACAAATTGGTTTACT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTGTCTTTGTTGAGTTaGAGTCCTTCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKLSLLS*SPSGQE
Trigger: TTCCTGCCCTGAAGGACTTCAACTCAACAAAGACAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCCACTTCAATGGCACTaGCACCTCCACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDPLQWH*HLHFQK
Trigger: TTTCTGAAAGTGGAGGTGTCAGTGCCATTGAAGTGG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTTTTCTGAATCACACTaGCATTCTGCCCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELFSESH*HSALST
Trigger: AGTGGACAGGGCAGAATGTCAGTGTGATTCAGAAAA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACTGGGATGGTATATCTaGAGGTCAAATGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLLGWYI*RSNGCA
Trigger: TGCACAGCCATTTGACCTTCAGATATACCATCCCAG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGTACTGACCACCACTTaGGCATTTTTCCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLVLTTT*AFFPVR
Trigger: TCTGACTGGGAAAAATGCTCAAGTGGTGGTCAGTAC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACATTGGCAACAGCTATaGTTCCCATTGGCTGATGTG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLHWQQL*FPLADV
Trigger: CACATCAGCCAATGGGAATCATAGCTGTTGCCAATG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGATTATAGCATGGCTTaGAGCCTCTTCGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLDYSMA*SLFDSF
Trigger: GAAGCTGTCGAAGAGGCTTCAAGCCATGCTATAATC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTTTTATGGGCACGGCTaGGTGACTTGGTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNFYGHG*VTWFSH
Trigger: ATGGGAAAACCAAGTCACTCAGCCGTGCCCATAAAA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGGTTCTTGGTACATTTaGATTGACCTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKGSWYI*IDLTGR
Trigger: TCTGCCTGTCAGGTCAATTCAAATGTACCAAGAACC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCCATGGCCAAATTTTTaGACTCGAAATACACCATTT +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCPWPNF*TRNTPF
Trigger: AAATGGTGTATTTCGAGTTCAAAAATTTGGCCATGG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGAGTTGCTACAGTGGTTaGCTTCACATCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKSCYSG*LHIFLL
Trigger: CAGGAGAAAGATGTGAAGTCAACCACTGTAGCAACT...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACCATTCTTTGGTCTTTTaGATGACCTGCCATCACTTC +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYHSLVF*MTCHHF
Trigger: GAAGTGATGGCAGGTCATGCAAAAGACCAAAGAATG...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGATGCCATTCGGCCATaGTATTCCCATGCTTACAAG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNDAIRP*YSHAYK
Trigger: CTTGTAAGCATGGGAATAGCATGGCCGAATGGCATC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGCTATTCTGCATCCTTaGTCATCTGAACCATCTCCG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNAILHP*SSEPSP
Trigger: CGGAGATGGTTCAGATGAGCAAGGATGCAGAATAGC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTGTACCATCCATGGCTaGTTCTTCTATATGGGAATG +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYCTIHG*FFYMGM
Trigger: CATTCCCATATAGAAGAAGCAGCCATGGATGGTACA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATTTATTTATAATGCAGTaGCCCCCATGGCACCTTACA +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNLFIMQ*PPWHLT
Trigger: TGTAAGGTGCCATGGGGGGCACTGCATTATAAATAA...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTATGATCAGACTTGCTaGTCTTTGGGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDYDQTC*SLGLAF
Trigger: AAAGGCCAGCCCCAAAGAGCAGCAAGTCTGATCATA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAACAAAGTAGATGTAATTaGTTTCTGCGTGAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: MPCCALGWLFISRLRENKQSRCN*FLRESL
Trigger: TAGACTTTCACGCAGAAACCAATTACATCTACTTTG...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAACAAGGATGCTTGGGTaGTCCACACAAGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLTRMLG*STQETV
Trigger: GACAGTTTCTTGTGTGGACCACCCAAGCATCCTTGT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTTGGCCACTTCGATTTaGTCCAGATTGCTGTCTATC +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELLATSI*SRLLSI
Trigger: GATAGACAGCAATCTGGACCAAATCGAAGTGGCCAA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTATCCTTTTCTCAAAGTaGTCCACAGTTAGTCCATTA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCILFSK*STVSPL
Trigger: TAATGGACTAACTGTGGACCACTTTGAGAAAAGGAT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGCCCTGTCCACTTATTaGCTTTGGACAATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNALSTY*LWTMCW
Trigger: CCAACACATTGTCCAAAGCCAATAAGTGGACAGGGC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCAAGAGGCCTTTCTCTaGGTGCACAGCTATAGATCT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNQEAFL*VHSYRS
Trigger: AGATCTATAGCTGTGCACCCAGAGAAAGGCCTCTTG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTACTGAGGAAAGTCCCTaGCCCAGATTTAACTATCAC +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELTEESP*PRFNYH
Trigger: GTGATAGTTAAATCTGGGCCAGGGACTTTCCTCAGT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGGACATGCACAAGTGTaGGTTTTTCCAGGGGCTAAA +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNGHAQV*VFPGAK
Trigger: TTTAGCCCCTGGAAAAACCCACACTTGTGCATGTCC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTCAAATATTTTCCTTCTaGACACACACAAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELQIFSF*THTSGP
Trigger: GGGGCCACTTGTGTGTGTCCAGAAGGAAAATATTTG...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTTCTCCTGAATAACTaGGCCAACAGTGACACCTCA +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKFLLNN*ANSDTS
Trigger: TGAGGTGTCACTGTTGGCCCAGTTATTCAGGAGAAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGTCAACCTCACATTTTaGTCCTTCATAGCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNVNLTF*SFIARW
Trigger: CCAACGCGCTATGAAGGACCAAAATGTGAGGTTGAC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGTACCTGGCCTTTGTTaGGTCTATCATAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLVPGLC*VYHKAR
Trigger: CCTGGCTTTATGATAGACCCAACAAAGGCCAGGTAC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGAATACCAGAGCAACTaGCACAGCATTTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDEYQSN*HSISTL
Trigger: GAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTCATCAGGACAGCTATaGTTGAAGCAGTTTACTGAA +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYSSGQL*LKQFTE
Trigger: TTCAGTAAACTGCTTCAATCATAGCTGTCCTGATGA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATACAGTCATCTTCATCTaGCTGATCTTCGCAATCAAT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNTVIFI*LIFAIN
Trigger: ATTGATTGCGAAGATCAGTCAGATGAAGATGACTGT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCCAACCTTCATAACATaGGCACTTGACTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDPTFIT*ALDCVL
Trigger: AAGCACACAGTCAAGTGCTCATGTTATGAAGGTTGG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGATTCCATGGATAATTaGGGTTTTCAAAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNDSMDN*GFQRAI
Trigger: GATGGCTCTTTGAAAACCTCAATTATCCATGGAATC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAACACCTGGATATCTGTaGTGGCATGCCATGAGTAAA +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLTPGYL*WHAMSK
Trigger: TTTACTCATGGCATGCCATCACAGATATCCAGGTGT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCTAAAAGGCACAAATaGCTGCAACCACCATTATTT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNAKRHK*LQPPLF
Trigger: AAATAATGGTGGTTGCAGTCATTTGTGCCTTTTAGC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTCTTCTATATGGGAATaGTCCCCAACAACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDSSIWE*SPTTVQ
Trigger: CTGGACTGTTGTTGGGGATCATTCCCATATAGAAGA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGCTGACAGAGACTACTaGATTAGAGCCATCATACAG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLADRDY*IRAIIQ
Trigger: CTGTATGATGGCTCTAATTCAGTAGTCTCTGTCAGC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATTCACATCTTTCTCCTaGATAACTGGGCCAACAGTG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLFTSFS*ITGPTV
Trigger: CACTGTTGGCCCAGTTATTCAGGAGAAAGATGTGAA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCAATGCTTCTTGTGCTaGTATGATCAGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDQCFLC*YDQTCC
Trigger: GCAGCAAGTCTGATCATATCAGCACAAGAAGCATTG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTACAGTGTCTGTTTTTaGAGCGAAACTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELYSVCF*SETLQL
Trigger: AAGCTGGAGAGTTTCGCTGCAAAAACAGACACTGTA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCCAGTATATGTTTCCTaGTATCCAGTCGACTGTCAG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNPVYVS*YPVDCQ
Trigger: CTGACAGTCGACTGGATAGCAGGAAACATATACTGG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGAATGCGAGGAAAATTTaGATCCCAGTCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKNARKI*IPVCPE
Trigger: TTCTGGACAGACTGGGATGCAAATTTTCCTCGCATT...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAATCACACTGACATTCTaGCCTGTCCACTTATTGGCT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLITLTF*PVHLLA
Trigger: AGCCAATAAGTGGACAGGGCAGAATGTCAGTGTGAT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTCTGAAACAGAATCTTaGTATTACTGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLSETES*YYCHPY
Trigger: ATATGGATGGCAGTAATAGCAAGATTCTGTTTCAGA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACAAAACATATCCACATTaGTTCCTGACAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYKTYPH*FLTAPS
Trigger: AGATGGTGCTGTCAGGAAGCAATGTGGATATGTTTT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTGGTCACAAACAAATTaGTTGGGAATGCATACTTTA +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCWSQTN*LGMHTL
Trigger: TAAAGTATGCATTCCCAAGCAATTTGTTTGTGACCA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGAAGTTAGTGGGACATaGACAAGTGTGGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDEVSGT*TSVGFS
Trigger: GGAAAAACCCACACTTGTGCATGTCCCACTAACTTC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCAGAGCCTTCTGCTATaGAGGTGTTATTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNQSLLL*RCYFFL
Trigger: AAGAAAGAAATAACACCTGCATAGCAGAAGGCTCTG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTTATTTATAATGCAGTaGCCCCCATGGCACCTTACA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELLFIMQ*PPWHLT
Trigger: TGTAAGGTGCCATGGGGGGCACTGCATTATAAATAA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGATGAAGTTAAAGTATaGATTGTCAATATCCACTCC +
Preference number: 4 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCDEVKV*IVNIHS
Trigger: GGAGTGGATATTGACAATCCATACTTTAACTTCATC...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAAGCTGCAAGACACTGTaGCTTATCGATTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLSCKTL*LIDSMD
Trigger: ATCCATGGAATCGATAAGCCACAGTGTCTTGCAGCT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGAGATCTCATGATACTTaGATGTTGTTCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLRSHDT*MLFIPV
Trigger: AACTGGAATGAACAACATCCAAGTATCATGAGATCT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTACTATCACATGTCTCTaGGATCCATCGTATTCACAC +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELTITCL*DPSYSH
Trigger: GTGTGAATACGATGGATCCCAGAGACATGTGATAGT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAGCTATGATTCCCATTaGCTGATGTGGAATATCGGA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELSYDSH*LMWNIG
Trigger: TCCGATATTCCACATCAGCCAATGGGAATCATAGCT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGACTGGGATACATTTCTaGTTCTTGGTACATTTGAAT +
Preference number: 4 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLTGIHF*FLVHLN
Trigger: ATTCAAATGTACCAAGAACCAGAAATGTATCCCAGT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTTTCTCCTGAATAACTaGGCCAACAGTGACACCTCA +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDFLLNN*ANSDTS
Trigger: TGAGGTGTCACTGTTGGCCCAGTTATTCAGGAGAAA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAATTGCTTTAGGATTGTaGAGCTCCAGATCAATCAGG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLIALGL*SSRSIR
Trigger: CCTGATTGATCTGGAGCTTCACAATCCTAAAGCAAT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTGGCTGCTCTGTCTTTaGATCAATTATCCTTGTTCG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNWLLCL*INYPCS
Trigger: CGAACAAGGATAATTGATTCAAAGACAGAGCAGCCA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCTGGCTGTGCAAGTTTaGTTGGATTCATCTTCATTG +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNLAVQV*LDSSSL
Trigger: CAATGAAGATGAATCCAATCAAACTTGCACAGCCAG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACATTCATGACCTCGGATaGTTTCTATCATGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYIHDLG*FLSCLF
Trigger: GAACAAACATGATAGAAATCATCCGAGGTCATGAAT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCACTCCTATTGTGATTaGTTAGACACATGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDHSYCD*LDTCES
Trigger: GCTCTCACATGTGTCTAATCAATCACAATAGGAGTG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTATGGTTCCATTCCCTaGACTGATCCAATAAAGCTT +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKYGSIP*TDPIKL
Trigger: AAGCTTTATTGGATCAGTTCAGGGAATGGAACCATA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCCATGGCCAAATTTTTaGACTCGAAATACACCATTT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNPWPNF*TRNTPF
Trigger: AAATGGTGTATTTCGAGTTCAAAAATTTGGCCATGG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCAGGTTCCTCCATTTTaGCAAAAATCCTCACAGACT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDQVPPF*QKSSQT
Trigger: AGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACTTCTTGTGCTGATATaGTCAGACTTGCTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLLLVLI*SDLLLF
Trigger: AAAGAGCAGCAAGTCTGATCATATCAGCACAAGAAG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTCGACTCTCCACTTTTaGTTATGGGAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: CESYIFSAESESIFMGTKSTLHF*LWEDHC
Trigger: ACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTCGACTCTCCACTTTTaGTTATGGGAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELSTLHF*LWEDHC
Trigger: ACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGGCATGTTCTGGCTGTaGAAGTTTGATTGGATTCAT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNGMFWL*KFDWIH
Trigger: ATGAATCCAATCAAACTTGCACAGCCAGAACATGCC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTGGGAATTCACAAGATaGCATTTCATCTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNWEFTR*HFICLV
Trigger: GACCAGACAGATGAAATGGCATCTTGTGAATTCCCA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTGCATCTTCCACTTTTaGATACGAATTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELCIFHF*IRIGLV
Trigger: CACTAACCCAATTCGTATGCAAAAGTGGAAGATGCA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACAAGGTCAAATGGCTGTaGACTGGTTTTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNKVKWL*TGFLNH
Trigger: GTGATTCAGAAAACCAGTGCACAGCCATTTGACCTT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAATCTATGTTCTGGTTaGATCGTGCTGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELNLCSG*IVLILE
Trigger: TTCCAAGATCAGCACGATGCAACCAGAACATAGATT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTACATTTGTCAGTTTTaGAACGAAACTGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDYICQF*NETGWL
Trigger: CAGCCAGCCAGTTTCGTTGCAAAACTGACAAATGTA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCATCTGAATTATCACTaGAGTCATTTTGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNHLNYH*SHFGYH
Trigger: GTGATAGCCAAAATGACTGCAGTGATAATTCAGATG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTATCTTCAGAGCCTTCTaGTATGCAGGTGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELIFRAF*YAGVIS
Trigger: AGAAATAACACCTGCATAGCAGAAGGCTCTGAAGAT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTCCTCTAACAATTCCTaGGCGTCCTTTCCCATAAAA +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDSSNNS*ASFPIK
Trigger: TTTTATGGGAAAGGACGCCCAGGAATTGTTAGAGGA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACATTTCCACCGAGCTTaGATACAGTGTCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLHFHRA*IQCLFL
Trigger: CAAAAACAGACACTGTATCCAAGCTCGGTGGAAATG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGTATCATTTTCTGCATaGAAATCTATTCCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELVSFSA*KSIPTA
Trigger: TGCCGTGGGAATAGATTTCCATGCAGAAAATGATAC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGATAGTAAGTCCATTTaGAGTGAGTATGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYDSKSI*SEYVCT
Trigger: AGTACAGACATACTCACTCCAAATGGACTTACTATC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACACATTTCCATTTTGCTaGTATACACTGACCATTGGA +
Preference number: 4 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYTFPFC*YTLTIG
Trigger: TCCAATGGTCAGTGTATACCAGCAAAATGGAAATGT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGTGAGGTCTCGTGGATaGACAAAGAAATTTGACACA +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLVRSRG*TKKFDT
Trigger: TGTGTCAAATTTCTTTGTCCATCCACGAGACCTCAC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTATTTGTTAAGAGTCTaGTGCAGTTGGGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNYLLRV*CSWGHS
Trigger: TGAATGGCCCCAACTGCACCAGACTCTTAACAAATA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCTAACTTGTCTGCCTTaGATGACAGTGTGTCTATTT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDLTCLP*MTVCLF
Trigger: AAATAGACACACTGTCATTCAAGGCAGACAAGTTAG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTTTTCATCCAAAAGTTaGTTATCGGCACAAGCACAC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDFSSKS*LSAQAH
Trigger: GTGTGCTTGTGCCGATAATCAACTTTTGGATGAAAA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGTTGGTAAACAAAGTTaGGAGCATCCACCATTGTTT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLVGKQS*EHPPLF
Trigger: AAACAATGGTGGATGCTCTCAACTTTGTTTACCAAC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAACGGAAAGAACCATTaGGTCTTGCAACTTCAATTA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELNGKNH*VLQLQL
Trigger: TAATTGAAGTTGCAAGACTCAATGGTTCTTTCCGTT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACACATTTCAAAGATGCTaGAATACATCCATCACTGGC +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNTFQRC*NTSITG
Trigger: GCCAGTGATGGATGTATTTCAGCATCTTTGAAATGT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR TCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGTGATGCTGAACTTGTaGGAGCTATATATTTTCAGC +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDVMLNL*ELYIFS
Trigger: GCTGAAAATATATAGCTCTCACAAGTTCAGCATCAC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGATCTACTGCTATTaGTTTAGGATTGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLWIYCY*FRIVKL
Trigger: GAGCTTCACAATCCTAAAGCAATAGCAGTAGATCCA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCACCATTATTTATCATaGAGAGATGTTTGGAGACAT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNHHYLS*RDVWRH
Trigger: ATGTCTCCAAACATCTCTGCATGATAAATAATGGTG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACAGAGCCTTCTGCTATaGAGGTGTTATTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLQSLLL*RCYFFL
Trigger: AAGAAAGAAATAACACCTGCATAGCAGAAGGCTCTG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR GCA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATATCTTCAGAGCCTTCTaGTATGCAGGTGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: WEDHCSSTTWKALEYILDIFRAF*YAGVIS
Trigger: AGAAATAACACCTGCATAGCAGAAGGCTCTGAAGAT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTACCAGTATAATGTGTTaGTGTGAAAGTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELTSIMC*CESPEL
Trigger: TAACTCTGGACTTTCACACCAACACATTATACTGGT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGTAGAAAATTCCGCCTaGATTAAACTGAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNVENSA*IKLSTP
Trigger: TGGAGTACTCAGTTTAATCCAGGCGGAATTTTCTAC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATATTGGAGTAATTTGTTaGCTTTGTTGGGTCTATCAT +
Preference number: 4 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNIGVIC*LCWVYH
Trigger: ATGATAGACCCAACAAAGCCAACAAATTACTCCAAT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS-3UTR TCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTCATCTTCATCTGACTaGTCTTCGCAATCAATATCT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNSSSSD*SSQSIS
Trigger: AGATATTGATTGCGAAGATCAGTCAGATGAAGATGA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCAATTTTTCCTAGACTaGCATCTGAGAAATACAGCT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNQFFLD*HLRNTA
Trigger: AGCTGTATTTCTCAGATGGCAGTCTAGGAAAAATTG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAAAGGCACAAATGACTaGAACCACCATTATTTATCA +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELKGTND*NHHYLS
Trigger: TGATAAATAATGGTGGTTGCAGTCATTTGTGCCTTT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATCCTATGGCCATCATTaGTCCAGTAAAGATTATTTC +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLSYGHH*SSKDYF
Trigger: GAAATAATCTTTACTGGACCAATGATGGCCATAGGA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAACACAGCCATCTAATTaGAATACAGTGGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLTQPSN*NTVGFI
Trigger: AATAAAGCCCACTGTATTCCAATTAGATGGCTGTGT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGCATCATCTCCACATaGATTCACATTATCTTCACA +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLCIIST*IHIIFT
Trigger: TGTGAAGATAATGTGAATCCATGTGGAGATGATGCA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGTAGTGTAAGGGGTTaGGTTAATCTTCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLCSVRG*VNLPQN
Trigger: ATTTTGTGGAAGATTAACCCAACCCCTTACACTACA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTGTTCTTCTACAACTTaGAAGGCCCTTGAATATATT +
Preference number: 4 (lower is better)
Translates to: SSIGWQSKANFKAGDAELCSSTT*KALEYI
Trigger: AATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATTGCATATACCGGATTaGAGTAATTTGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLLHIPD*SNLLAL
Trigger: CAAAGCCAACAAATTACTCCAATCCGGTATATGCAA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCAAATTGCTTGGGAATaGATACTTTATTATGGCACA +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNQIAWE*ILYYGT
Trigger: TGTGCCATAATAAAGTATGCATTCCCAAGCAATTTG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR GCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACATCACATTTCCATTTTaGTGGTATACACTGACCATT +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNITFPF*WYTLTI
Trigger: AATGGTCAGTGTATACCAGCAAAATGGAAATGTGAT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGGCTTATCGATTCCATaGATAATTGAGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNGLSIP*IIEVFK
Trigger: TTTGAAAACCTCAATTATCCATGGAATCGATAAGCC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CCA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAAAATACATCCATCACTaGCACATATATATTCACGTG +
Preference number: 4 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLKYIHH*HIYIHV
Trigger: CACGTGAATATATATGTGCCAGTGATGGATGTATTT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
3UTR CAA 72 bp TGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTaGGATAGGGCAAATAATGGGTTGCTCATATTAAAT +
Preference number: 4 (lower is better)
Translates to: CSSTTWKALEYI*DRANNGLLILN
Trigger: ATTTAATATGAGCAACCCATTATTTGCCCTATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS GCA 90 bp ACTCGGACATTGTGGTCGCCCGGTAAGGAAGCCTGCGCTGGAGACTaGTCGGCGGCACCTTCGGCCCGGCGGCGGCGGCGGCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: TRTLWSPGKEACAGD*SAAPSARRRRRRQG
Trigger: CCCCTGCCGCCGCCGCCGCCGCCGGGCCGAAGGTGCCGCCGAGCAGTCTCCAGCGCAGGCTTCCTTACCGGGCGACCACAATGTCCGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 90 bp AGGCGAGGAGAAACTCGGACATTGTGGTCGCCCGGTAAGGAAGCCTaGGCTGGAGACTGCTCGGCGGCACCTTCGGCCCGGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: RRGETRTLWSPGKEA*AGDCSAAPSARRRR
Trigger: CCGCCGCCGCCGGGCCGAAGGTGCCGCCGAGCAGTCTCCAGCGCAGGCTTCCTTACCGGGCGACCACAATGTCCGAGTTTCTCCTCGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp GGCGGCACCTTCGGCCCGGCGGCGGCGGCGGCGGCAGGGGCCGCTTaGAGCCTGGAATCGAGCGGCGTCATTTACAAATGTCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: GGTFGPAAAAAAGAA*SLESSGVIYKCHWK
Trigger: TTTCCAGTGACATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCCGCCGCCGCCGCCGGGCCGAAGGTGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 90 bp AGTCAGCCTTCTCCTGCCTGGAGCAGGATGTGGAAGGTGGAGGGATaGGCGCGTGCGGGAGAGAGGAGGCAGAGCGTGTGTGAGCGCGAG +
Preference number: 5 (lower is better)
Translates to: SQPSPAWSRMWKVEG*ARAGERRQSVCERE
Trigger: CTCGCGCTCACACACGCTCTGCCTCCTCTCTCCCGCACGCGCGCATCCCTCCACCTTCCACATCCTGCTCCAGGCAGGAGAAGGCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 90 bp GGTGGAGGGATGCGCGCGTGCGGGAGAGAGGAGGCAGAGCGTGTGTaGGCGCGAGCGAGACGCCCGTGTGTCTTGACTTTTCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: GGGMRACGREEAERV*ARARRPCVLTFQCR
Trigger: CCTGCATTGAAAAGTCAAGACACACGGGCGTCTCGCTCGCGCTCACACACGCTCTGCCTCCTCTCTCCCGCACGCGCGCATCCCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp CCTTCGGCCCGGCGGCGGCGGCGGCGGCAGGGGCCGCTTGGAGCCTaGAATCGAGCGGCGTCATTTACAAATGTCACTGGAAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: PSARRRRRRQGPLGA*NRAASFTNVTGNSS
Trigger: TGAAGAATTTCCAGTGACATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCCGCCGCCGCCGCCGGGCCGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp AAATTCTTCAGCTCAATGAGTCCAGCCAGTCAGCCTTCTCCTGCCTaGAGCAGGATGTGGAAGGTGGAGGGATGCGCGCGTGCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: KFFSSMSPASQPSPA*SRMWKVEGCARAGE
Trigger: CTCTCCCGCACGCGCGCATCCCTCCACCTTCCACATCCTGCTCCAGGCAGGAGAAGGCTGACTGGCTGGACTCATTGAGCTGAAGAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 90 bp CTCCCACGGTCAGCACCCTGGCAATCGGCAATAATCCCGAGAGAGTaGGTAAGGCGAGGAGAAACTCGGACATTGTGGTCGCCCGGTAAG +
Preference number: 5 (lower is better)
Translates to: LPRSAPWQSAIIPRE*VRRGETRTLWSPGK
Trigger: CTTACCGGGCGACCACAATGTCCGAGTTTCTCCTCGCCTTACTCACTCTCTCGGGATTATTGCCGATTGCCAGGGTGCTGACCGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 90 bp CACAAAGCCAATGTCGGGGCACGCAGGCACGAGAGCCCTGGCAGCTaGACATGTCAGCAGCACAGGTTATGGCACCACAAATGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: HKANVGARRHESPGS*TCQQHRLWHHKCCH
Trigger: GTGACAGCATTTGTGGTGCCATAACCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTGCGTGCCCCGACATTGGCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGGCGGCAGGGGCCGCTaGGAGCCTGGAATCGAGCGG +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFGGRGR*EPGIER
Trigger: CCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp TCACCATCACAAAGCCAATGTCGGGGCACGCAGGCACGAGAGCCCTaGCAGCTGAACATGTCAGCAGCACAGGTTATGGCACCACAAATG +
Preference number: 5 (lower is better)
Translates to: SPSQSQCRGTQAREP*QLNMSAAQVMAPQM
Trigger: CATTTGTGGTGCCATAACCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTGCGTGCCCCGACATTGGCTTTGTGATGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp GGTCACCACAGTCGTCTTCCCTGTCACACAGCCATGCTCTGGGAATaGAACGCCCATTTCCGCAAGAAAACTGGTCTACCTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: GHHSRLPCHTAMLWE*NAHFRKKTGLPGMF
Trigger: GAACATGCCAGGTAGACCAGTTTTCTTGCGGAAATGGGCGTTGCATTCCCAGAGCATGGCTGTGTGACAGGGAAGACGACTGTGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp CCAAGGCCGGTTCTCATGGTTATCGTTTCTGTGGCATCATTCTTGTaGCCCCTTCTGACAGACCCGTTTGCATGTGCTCTGTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: PRPVLMVIVSVASFL*PLLTDPFACALSDQ
Trigger: CTGGTCTGACAGAGCACATGCAAACGGGTCTGTCAGAAGGGGCCACAAGAATGATGCCACAGAAACGATAACCATGAGAACCGGCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTGACACACAGGTACATTaGTCTCGGGGTCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTDTQVH*SRGPAG
Trigger: GCCAGCTGGACCCCGAGACAAATGTACCTGTGTGTC...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTGCTGTGTGTGGAAGCTaGAAAGCACTGGGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTAVCGS*KALGPP
Trigger: GGGAGGACCCAGTGCTTTCAAGCTTCCACACACAGC...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp CATCACAGGCCCAGTGGCCTGGGATGCATCTGCCACTGGAACATCTaGACTGATTATCAAAGCAAGAGTGAACACAGCCCACCTCATCAC +
Preference number: 5 (lower is better)
Translates to: HHRPSGLGCICHWNI*TDYQSKSEHSPPHH
Trigger: GTGATGAGGTGGGCTGTGTTCACTCTTGCTTTGATAATCAGTTCAGATGTTCCAGTGGCAGATGCATCCCAGGCCACTGGGCCTGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 90 bp GCCATTCGGCCATGCTATTCCCATGCTTACAAGGACAACCTTCTCTaGGCCATCCAAGCGAGCCTTTCCAATACAGGGCATTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: AIRPCYSHAYKDNLL*AIQASLSNTGHLSP
Trigger: TGGGGACAAATGCCCTGTATTGGAAAGGCTCGCTTGGATGGCTCAGAGAAGGTTGTCCTTGTAAGCATGGGAATAGCATGGCCGAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp GCCGCTTGGAGCCTGGAATCGAGCGGCGTCATTTACAAATGTCACTaGAAATTCTTCAGCTCAATGAGTCCAGCCAGTCAGCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AAWSLESSGVIYKCH*KFFSSMSPASQPSP
Trigger: AGGAGAAGGCTGACTGGCTGGACTCATTGAGCTGAAGAATTTCCAGTGACATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp GGGAGCCTGTGGCTGGCGACTGGGATGGTATATCTGAAGGTCAAATaGCTGTGCACTGGTTTTCTGAATCACACTGACATTCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: GSLWLATGMVYLKVK*LCTGFLNHTDILPC
Trigger: ACAGGGCAGAATGTCAGTGTGATTCAGAAAACCAGTGCACAGCCATTTGACCTTCAGATATACCATCCCAGTCGCCAGCCACAGGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGCTTTGGACAATGTGTaGGTCCTCCAGTCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREALDNV*VLQSVQ
Trigger: CTGGACAGACTGGAGGACCAACACATTGTCCAAAGC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCAGACTTGCTGCTCTTaGGGGCTGGCCTTTCACACT +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLQTCCS*GLAFHT
Trigger: AGTGTGAAAGGCCAGCCCCAAAGAGCAGCAAGTCTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CCA 90 bp TATCCAGTATATGTTTCCTGCTATCCAGTCGACTGTCAGGCCTTCTaGAGTAGCCAGGCCATGCTCCACAACCACTTCAATGGCACTGAC +
Preference number: 5 (lower is better)
Translates to: YPVYVSCYPVDCQAF*SSQAMLHNHFNGTD
Trigger: GTCAGTGCCATTGAAGTGGTTGTGGAGCATGGCCTGGCTACTCCAGAAGGCCTGACAGTCGACTGGATAGCAGGAAACATATACTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTCCATCACTTCCCAAGTaGAAGCCAGTCCTGCAGCGA +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETPSLPK*KPVLQR
Trigger: TCGCTGCAGGACTGGCTTCAACTTGGGAAGTGATGG...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTTAGCTGCACAAGGATaGGGAGCCTGTGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFLAAQG*GACGWR
Trigger: TCGCCAGCCACAGGCTCCCAATCCTTGTGCAGCTAA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTTATGCGACTGCCATaGGGTCGGCTAGAATCGATC +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREFMRLP*GRLESI
Trigger: GATCGATTCTAGCCGACCCAATGGCAGTCGCATAAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCGCACGGCTGAGTGACTaGGTTTTCCCATCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSARLSD*VFPSVQ
Trigger: CTGGACTGATGGGAAAACCAAGTCACTCAGCCGTGC...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAAAGAGTCTGGTGCAGTaGGGGCCATTCAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKKSLVQ*GPFSCP
Trigger: AGGGCAGCTGAATGGCCCCAACTGCACCAGACTCTT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGTCCTTCATAGCGCGTaGGACAGACACATTCAACAC +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREVLHSA*DRHIQH
Trigger: GTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGAC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCAGACTTGCTGCTCTTaGGGGCTGGCCTTTCACACT +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAQTCCS*GLAFHT
Trigger: AGTGTGAAAGGCCAGCCCCAAAGAGCAGCAAGTCTG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp TTTGACAAAAATCCTCACAGACTGTCTTACCACAGTTTGGCCCAGTaGAACCCAGTGCACAGCTGCAGGTGGGTCTCCCTAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: FDKNPHRLSYHSLAQ*NPVHSCRWVSLELM
Trigger: CATCAGTTCTAGGGAGACCCACCTGCAGCTGTGCACTGGGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGTGAGGATTTTTGTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS GCA 90 bp CACTTCGATTTGGTCCAGATTGCTGTCTATCCAGTATATGTTTCCTaGTATCCAGTCGACTGTCAGGCCTTCTGGAGTAGCCAGGCCATG +
Preference number: 5 (lower is better)
Translates to: HFDLVQIAVYPVYVS*YPVDCQAFWSSQAM
Trigger: CATGGCCTGGCTACTCCAGAAGGCCTGACAGTCGACTGGATAGCAGGAAACATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 90 bp CTGTGGCTGGCGACTGGGATGGTATATCTGAAGGTCAAATGGCTGTaGACTGGTTTTCTGAATCACACTGACATTCTGCCCTGTCCACTT +
Preference number: 5 (lower is better)
Translates to: LWLATGMVYLKVKWL*TGFLNHTDILPCPL
Trigger: AAGTGGACAGGGCAGAATGTCAGTGTGATTCAGAAAACCAGTGCACAGCCATTTGACCTTCAGATATACCATCCCAGTCGCCAGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 90 bp TTTCCTCATAGTCGATGGAGATGCCATTCGGCCATGCTATTCCCATaGTTACAAGGACAACCTTCTCTGAGCCATCCAAGCGAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: FPHSRWRCHSAMLFP*LQGQPSLSHPSEPF
Trigger: GAAAGGCTCGCTTGGATGGCTCAGAGAAGGTTGTCCTTGTAAGCATGGGAATAGCATGGCCGAATGGCATCTCCATCGACTATGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp TATGATCAGACTTGCTGCTCTTTGGGGCTGGCCTTTCACACTGTGTaGCTGACCAGTTGGTGGAGCATAGACACACAGGTACATTTGTCT +
Preference number: 5 (lower is better)
Translates to: YDQTCCSLGLAFHTV*LTSWWSIDTQVHLS
Trigger: AGACAAATGTACCTGTGTGTCTATGCTCCACCAACTGGTCAGGCACACAGTGTGAAAGGCCAGCCCCAAAGAGCAGCAAGTCTGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CCA 90 bp CACAGCCATGCTCTGGGAATGCAACGCCCATTTCCGCAAGAAAACTaGTCTACCTGGCATGTTCTGGAGGTATCTAAAGACTCGTCTGAA +
Preference number: 5 (lower is better)
Translates to: HSHALGMQRPFPQEN*STWHVLEVSKDSSE
Trigger: TTCAGACGAGTCTTTAGATACCTCCAGAACATGCCAGGTAGACCAGTTTTCTTGCGGAAATGGGCGTTGCATTCCCAGAGCATGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434794.1
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTGCTTACAGCCACCATaGTCCCTGGCACAAACATTG +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTCLQPP*SLAQTL
Trigger: CAATGTTTGTGCCAGGGACAATGGTGGCTGTAAGCA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTGTGTGCCTGACCAGTaGGTGGAGCATAGACACACA +
Preference number: 5 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSCVPDQ*VEHRHT
Trigger: TGTGTGTCTATGCTCCACCAACTGGTCAGGCACACA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp ACTCATTCTTTGGTCTTTTGCATGACCTGCCATCACTTCCCAAGTTaGAGCCAGTCCTGCAGCGACAAGTCCGAGTTTTGTAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: THSLVFCMTCHHFPS*SQSCSDKSEFCNCC
Trigger: GCAGCAGTTACAAAACTCGGACTTGTCGCTGCAGGACTGGCTTCAACTTGGGAAGTGATGGCAGGTCATGCAAAAGACCAAAGAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp GGCAGGAACAGACAATTCCTCTTCCAGGAACAACAGAACAGTGGTTaGTACAGCCTCCATTGTTCAGCGAACACTCATCACAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: GRNRQFLFQEQQNSG*YSLHCSANTHHRDS
Trigger: GCTATCTCTGTGATGAGTGTTCGCTGAACAATGGAGGCTGTAGCAACCACTGTTCTGTTGTTCCTGGAAGAGGAATTGTCTGTTCCTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp TTCATCCAAAAGTTGATTATCGGCACAAGCACACACCCGGCCTCCTaGGATAGCCAAGCAAAGTGTACTACAGCCCCCATTATTTACTCG +
Preference number: 5 (lower is better)
Translates to: FIQKLIIGTSTHPAS*DSQAKCTTAPIIYS
Trigger: CGAGTAAATAATGGGGGCTGTAGTACACTTTGCTTGGCTATCCCAGGAGGCCGGGTGTGTGCTTGTGCCGATAATCAACTTTTGGATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGTCCACTTATTGGCTTaGGACAATGTGTTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLVHLLA*DNVLVL
Trigger: GAGGACCAACACATTGTCCAAAGCCAATAAGTGGAC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTTCTTCCGTCTCTTTaGCTGCAGGTTCCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETFLPSL*LQVPSW
Trigger: CCAGCTAGGAACCTGCAGCAAAAGAGACGGAAGAAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTTTAGTTGGCAGGAATaGCTGCCTTGCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLFSWQE*LPCCAS
Trigger: AGAAGCACAGCAAGGCAGCAATTCCTGCCAACTAAA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTGTACTGACCACCACTaGAGCATTTTTCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLCTDHH*SIFPSQ
Trigger: CTGACTGGGAAAAATGCTCAAGTGGTGGTCAGTACA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTCATCACATGTATTATaGGGAGCGCAGCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLASSHVL*GAQPAV
Trigger: CACAGCAGGCTGCGCTCCCAATAATACATGTGATGA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTACTGACCGGAAGGTCTaGACAGTCTTGAGAACATCC +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETTDRKV*TVLRTS
Trigger: GGATGTTCTCAAGACTGTCAAGACCTTCCGGTCAGT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGCCGTCATCCTTCAGTaGGAATCCAGGCCAGCATTT +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKAVILQ*ESRPAF
Trigger: AAATGCTGGCCTGGATTCCAACTGAAGGATGACGGC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTGTGTGCCTGACCAGTaGGTGGAGCATAGACACACA +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFCVPDQ*VEHRHT
Trigger: TGTGTGTCTATGCTCCACCAACTGGTCAGGCACACA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp TCTCCAGGATTAAATGTGCAAGTTGTCCCATTTTCATCCAAAAGTTaGTTATCGGCACAAGCACACACCCGGCCTCCTGGGATAGCCAAG +
Preference number: 5 (lower is better)
Translates to: SPGLNVQVVPFSSKS*LSAQAHTRPPGIAK
Trigger: CTTGGCTATCCCAGGAGGCCGGGTGTGTGCTTGTGCCGATAATCAACTTTTGGATGAAAATGGGACAACTTGCACATTTAATCCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp TTCTCATGGTTATCGTTTCTGTGGCATCATTCTTGTGGCCCCTTCTaGCAGACCCGTTTGCATGTGCTCTGTCAGACCAGTAGATGTAAG +
Preference number: 5 (lower is better)
Translates to: FSWLSFLWHHSCGPF*QTRLHVLCQTSRCK
Trigger: CTTACATCTACTGGTCTGACAGAGCACATGCAAACGGGTCTGTCAGAAGGGGCCACAAGAATGATGCCACAGAAACGATAACCATGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp CGTCGCCATCACATTTCCACCGAGCTTGGATACAGTGTCTGTTTTTaGAGCGAAACTCTCCAGCTTTACATATGTGAGGTAGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RRHHISTELGYSVCF*SETLQLYICEVVLL
Trigger: GAGAAGCACTACCTCACATATGTAAAGCTGGAGAGTTTCGCTGCAAAAACAGACACTGTATCCAAGCTCGGTGGAAATGTGATGGCGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp TTTCTTCCGTCTCTTTTGCTGCAGGTTCCTAGCTGGGCTAAGTTTTaGTCTGCCCACCACAGTTTCTTATCCATGATGGTTAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: FLPSLLLQVPSWAKF*SAHHSFLSMMVRAV
Trigger: TACAGCCCTAACCATCATGGATAAGAAACTGTGGTGGGCAGACCAAAACTTAGCCCAGCTAGGAACCTGCAGCAAAAGAGACGGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp AGACTTTCATATGAACTACCCCAGAAGTCTTATTCCGTAGGATGGTaGGGTTTCTTCCGTCTCTTTTGCTGCAGGTTCCTAGCTGGGCTA +
Preference number: 5 (lower is better)
Translates to: RLSYELPQKSYSVGW*GFFRLFCCRFLAGL
Trigger: TAGCCCAGCTAGGAACCTGCAGCAAAAGAGACGGAAGAAACCCCACCATCCTACGGAATAAGACTTCTGGGGTAGTTCATATGAAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAACAGCACATTCATCTaGATCTTTACAGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLRENSTFI*IFTASP
Trigger: GGGAGAAGCTGTAAAGATCAAGATGAATGTGCTGTT...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTGTCAATCGCCATTTGTaGCACATTGTGGAAGGATTG +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTVNRHL*HIVEGL
Trigger: CAATCCTTCCACAATGTGCAACAAATGGCGATTGAC...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCAGGAAAACTTGGTTTaGTGGTCACACAATCGTATG +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREQENLV*WSHNRM
Trigger: CATACGATTGTGTGACCACAAAACCAAGTTTTCCTG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACAACAGAACAGTGGTaGCTACAGCCTCCATTGTTC +
Preference number: 5 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSTTEQW*LQPPLF
Trigger: GAACAATGGAGGCTGTAGCAACCACTGTTCTGTTGT...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGAGGGAGCCATCTAGTTaGGCCACTTCGATTTGGTCC +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLREPSS*ATSIWS
Trigger: GGACCAAATCGAAGTGGCCAAACTAGATGGCTCCCT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCTCCTCCTGTGTACTaGTTGGACCGCAGTATAGCT +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSPPVY*LDRSIA
Trigger: AGCTATACTGCGGTCCAACAAGTACACAGGAGGAGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGGCGATTTGCAGCCATTaGGGTTATCAGGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREAICSH*GYQVVF
Trigger: AAATACAACCTGATAACCCAAATGGCTGCAAATCGC...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGCAATGTAGAGAACTaGATCTTCAGAGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLSNVEN*IFRAFC
Trigger: GCAGAAGGCTCTGAAGATCAAGTTCTCTACATTGCT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACAAGAGTCTGGTGCAGTaGGGGCCATTCAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYKSLVQ*GPFSCP
Trigger: AGGGCAGCTGAATGGCCCCAACTGCACCAGACTCTT...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGTCCTTCATAGCGCGTaGGACAGACACATTCAACAC +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKVLHSA*DRHIQH
Trigger: GTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGAC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGTGGCACCTTACACACTaGTCAACCTCACATTTTGGT +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLWHLTH*STSHFG
Trigger: ACCAAAATGTGAGGTTGACAAGTGTGTAAGGTGCCA...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp TGTACAACTTTCACCGTCTACATCCAGCTTCCAACCTTCATAACATaGGCACTTGACTGTGTGCTTGTGCTGCTCACATACTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: CTTFTVYIQLPTFIT*ALDCVLVLLTYLAA
Trigger: TGCAGCCAAGTATGTGAGCAGCACAAGCACACAGTCAAGTGCTCATGTTATGAAGGTTGGAAGCTGGATGTAGACGGTGAAAGTTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 90 bp AAATCAGTGAGAGTCTGTCTGCTCCCGATGTTTTATGGGCACGGCTaGGTGACTTGGTTTTCCCATCAGTCCAGTAGATGTAGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: KSVRVCLLPMFYGHG*VTWFSHQSSRCSLQ
Trigger: TTGAAGACTACATCTACTGGACTGATGGGAAAACCAAGTCACTCAGCCGTGCCCATAAAACATCGGGAGCAGACAGACTCTCACTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp GGTAGCCTTCCACACAACTGCAAGTGTAGGATCCATGTGTGTTTCTaGAGGTCTGGCTGCATGTACCATAAACAGCACATTCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: GSLPHNCKCRIHVCF*RSGCMYHKQHIHLD
Trigger: ATCAAGATGAATGTGCTGTTTATGGTACATGCAGCCAGACCTGCAGAAACACACATGGATCCTACACTTGCAGTTGTGTGGAAGGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp TCGTGCATTCATTGTGTGAGGTTATGCTGTTCCATGGAGCAGCAGTaGCTGAGCACAGACCTGCCTCAACTGTATAGCAGATATATTTCA +
Preference number: 5 (lower is better)
Translates to: SCIHCVRLCCSMEQQ*LSTDLPQLYSRYIS
Trigger: TGAAATATATCTGCTATACAGTTGAGGCAGGTCTGTGCTCAGGCACTGCTGCTCCATGGAACAGCATAACCTCACACAATGAATGCACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486364.1
CDS CCA 90 bp CTAGCAATATTCGGTCCCCTCTGCAGGAACAATTCACTCTCCCATTaGGAGTTAAAAGGCACAAGTCATGGCAGCCTCCATTCAATAATG +
Preference number: 5 (lower is better)
Translates to: LAIFGPLCRNNSLSH*ELKGTSHGSLHSIM
Trigger: CATTATTGAATGGAGGCTGCCATGACTTGTGCCTTTTAACTCCCAATGGGAGAGTGAATTGTTCCTGCAGAGGGGACCGAATATTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGAGACGCCCGTGTGTCTaGACTTTTCAATGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLRRPCV*TFQCRV
Trigger: TACCCTGCATTGAAAAGTCAAGACACACGGGCGTCT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGGAGAAACTCGGACATaGTGGTCGCCCGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYGETRT*WSPGKE
Trigger: TTCCTTACCGGGCGACCACAATGTCCGAGTTTCTCC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTAGTGGCTCACAAGTaGGGAATTCACAAGATGCCA +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETLVAHK*GIHKMP
Trigger: TGGCATCTTGTGAATTCCCAACTTGTGAGCCACTAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCACACACCCATGCTTaGTTGATGCATCTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSHTHA*LMHLPV
Trigger: TACAGGGAGATGCATCAACAAAGCATGGGTGTGTGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTATTGTCTTTGTTGAGTaGAAGTCCTTCAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETIVFVE*KSFRAG
Trigger: TCCTGCCCTGAAGGACTTCAACTCAACAAAGACAAT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCACTTGACTGTGTGCTaGTGCTGCTCACATACTTGG +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLHLTVC*CCSHTW
Trigger: CCAAGTATGTGAGCAGCACAAGCACACAGTCAAGTG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTGCCCTGTCCACTTATaGGCTTTGGACAATGTGTTG +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFCPVHL*ALDNVL
Trigger: CAACACATTGTCCAAAGCCAATAAGTGGACAGGGCA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCTCTGCTAATTTTATaGAAGCCCATGTCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETALLIL*KPMSVQ
Trigger: CTGGACAGACATGGGCTTCAATAAAATTAGCAGAGC...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTTCCCTGGCACAAACATaGGTCCCTTTCTCTCTTACT +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFSLAQT*VPFSLT
Trigger: AGTAAGAGAGAAAGGGACCAATGTTTGTGCCAGGGA...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGATACATTTGTCAGTTTaGCAACGAAACTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLIHLSV*QRNWLA
Trigger: AGCCAGCCAGTTTCGTTGCAAAACTGACAAATGTAT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGCATCACATTTCCATTTaGCTGGTATACACTGACCAT +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREHHISI*LVYTDH
Trigger: ATGGTCAGTGTATACCAGCAAAATGGAAATGTGATG...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTGCAGAGAGAATTATaGCAAAGGAACTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLRELQREL*QRNSSA
Trigger: AGCTGATGAGTTCCTTTGCAATAATTCTCTCTGCAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCAGCTGCCCTACGTaGATAGAGTACCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLFSCPT*IEYLRL
Trigger: CAGTCTGAGGTACTCTATCAACGTAGGGCAGCTGAA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTTGGCACCTTACACACTaGTCAACCTCACATTTTGGT +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAWHLTH*STSHFG
Trigger: ACCAAAATGTGAGGTTGACAAGTGTGTAAGGTGCCA...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGACACACAGGTACATTaGTCTCGGGGTCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELDTQVH*SRGPAG
Trigger: GCCAGCTGGACCCCGAGACAAATGTACCTGTGTGTC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCAACTTGGAAGGCCCTaGAATATATTTTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLQLGRP*NIFWIG
Trigger: CCCTATCCAAAATATATTCAAGGGCCTTCCAAGTTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGTTCGACTCTCCACTTTaGATTATGGGAAGATCATTG +
Preference number: 5 (lower is better)
Translates to: YPMPCCALGWLFISRLREFDSPL*IMGRSL
Trigger: CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAA...CTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp CAAAGATCCGGTCACCGACATGGTCCACAAAATAGAGATTTCGAGTaGGCCAGTCAATCGCCATTTGTTGCACATTGTGGAAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: QRSGHRHGPQNRDFE*ASQSPFVAHCGRIE
Trigger: TTCAATCCTTCCACAATGTGCAACAAATGGCGATTGACTGGCTCACTCGAAATCTCTATTTTGTGGACCATGTCGGTGACCGGATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp CACATAACTTGCCATGAGGAATGCAGCGGCGATTATAGCATGGCTTaGAGCCTCTTCGACAGCTTCTGTTTTCACAGTAGAGCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: HITCHEECSGDYSMA*SLFDSFCFHSRAVF
Trigger: AAAAACTGCTCTACTGTGAAAACAGAAGCTGTCGAAGAGGCTTCAAGCCATGCTATAATCGCCGCTGCATTCCTCATGGCAAGTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp ACAGTCATTAGACCCGTCGCATATCCAGGTTGGCAGAACACACAGTaGGGTAGAATTACATCTTATGAACCCTGTGGTTTTCACTCCAAG +
Preference number: 5 (lower is better)
Translates to: TVIRPVAYPGWQNTQ*GRITSYEPCGFHSK
Trigger: CTTGGAGTGAAAACCACAGGGTTCATAAGATGTAATTCTACCTCACTGTGTGTTCTGCCAACCTGGATATGCGACGGGTCTAATGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp TGGAGACATCAGGTTGTCTATAAGAATGATACACCTGGATATCTGTaGTGGCATGCCATGAGTAAATCAGTGAGAGTCTGTCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: WRHQVVYKNDTPGYL*WHAMSKSVRVCLLP
Trigger: CGGGAGCAGACAGACTCTCACTGATTTACTCATGGCATGCCATCACAGATATCCAGGTGTATCATTCTTATAGACAACCTGATGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp TTCTTAGGGAGCCATCTAGTTTGGCCACTTCGATTTGGTCCAGATTaGTGTCTATCCAGTATATGTTTCCTGCTATCCAGTCGACTGTCA +
Preference number: 5 (lower is better)
Translates to: FLGSHLVWPLRFGPD*CLSSICFLLSSRLS
Trigger: TGACAGTCGACTGGATAGCAGGAAACATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCTCCCTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp AGTCCAGAACAAGAGGCCTTTCTCTGGGTGCACAGCTATAGATCTTaGTTGATCCAGGCCTTGGGAAATAATTACATAACGGAAAGAACC +
Preference number: 5 (lower is better)
Translates to: SPEQEAFLWVHSYRS*LIQALGNNYITERT
Trigger: GGTTCTTTCCGTTATGTAATTATTTCCCAAGGCCTGGATCAACCAAGATCTATAGCTGTGCACCCAGAGAAAGGCCTCTTGTTCTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp CATAGCGCGTTGGACAGACACATTCAACACTTCCATCATCCCCAATaGTACATGATTCAGAATTCACACAATAGTGGTGGCACACGTAGT +
Preference number: 5 (lower is better)
Translates to: HSALDRHIQHFHHPQ*YMIQNSHNSGGTRS
Trigger: ACTACGTGTGCCACCACTATTGTGTGAATTCTGAATCATGTACCATTGGGGATGATGGAAGTGTTGAATGTGTCTGTCCAACGCGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGACAAAAATCTGCCGATaGAATCCATCCATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLTKICR*NPSIQA
Trigger: GGCCTGGATGGATGGATTCAATCGGCAGATTTTTGT...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGCACATATTGTCACCTaGTTGCTTTCGTGGATCATA +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAAHIVT*LLSWII
Trigger: TATGATCCACGAAAGCAACAAGGTGACAATATGTGC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTTACTCGGCACATATaGTCACCTTGTTGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETFTRHI*SPCCFR
Trigger: ACGAAAGCAACAAGGTGACAATATGTGCCGAGTAAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTACATTTCCACCGAGCTaGGATACAGTGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLATFPPS*DTVSVF
Trigger: AAAAACAGACACTGTATCCAAGCTCGGTGGAAATGT...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTCGATTCTCTCTATCTaGTCTGTGCGAGCATCACAC +
Preference number: 5 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCSILSI*SVRASH
Trigger: GTGTGATGCTCGCACAGACAAGATAGAGAGAATCGA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAACAATCTATGTTCTGGTaGCATCGTGCTGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKQSMFW*HRADLG
Trigger: TCCAAGATCAGCACGATGCAACCAGAACATAGATTG...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCTGCACTTTTACACTTaGGGTTTAAAGGTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLLHFYT*GLKVLH
Trigger: ATGAAGCACCTTTAAACCCAAAGTGTAAAAGTGCAG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTAAGGTCTTGACAGTCTaGAGAACATCCACTGACTTT +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAKVLTV*RTSTDF
Trigger: AAAGTCAGTGGATGTTCTCAAGACTGTCAAGACCTT...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTGTAGGGTACAAGCCATaGAGTTTGGATACTTCAATG +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAVGYKP*SLDTSM
Trigger: CATTGAAGTATCCAAACTCAATGGCTTGTACCCTAC...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTATCATGCAGAGATGTTaGGAGACATCAGGTTGTCTA +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETIMQRC*ETSGCL
Trigger: TAGACAACCTGATGTCTCCAAACATCTCTGCATGAT...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAGCAGGTTCCTCCATTTaGACAAAAATCCTCACAGAC +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKAGSSI*TKILTD
Trigger: GTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGC...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGGATTGGAGTAATTTGTaGGCTTTGTTGGGTCTATCA +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLDWSNL*ALLGLS
Trigger: TGATAGACCCAACAAAGCCAACAAATTACTCCAATC...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS TCA 90 bp ATATCTGAAGGTCAAATGGCTGTGCACTGGTTTTCTGAATCACACTaGCATTCTGCCCTGTCCACTTATTGGCTTTGGACAATGTGTTGG +
Preference number: 5 (lower is better)
Translates to: ISEGQMAVHWFSESH*HSALSTYWLWTMCW
Trigger: CCAACACATTGTCCAAAGCCAATAAGTGGACAGGGCAGAATGTCAGTGTGATTCAGAAAACCAGTGCACAGCCATTTGACCTTCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 90 bp GTAAGTCCCGTATGTATTGATGCATTGCTGGCTACAGGGAAAGCCTaGAGAGCATTCATCAATGTCTACACATGTTTTGCCGTCATCCTT +
Preference number: 5 (lower is better)
Translates to: VSPVCIDALLATGKA*RAFINVYTCFAVIL
Trigger: AAGGATGACGGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCTTTCCCTGTAGCCAGCAATGCATCAATACATACGGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp TTTCATACCCATCTGTACAGAGGCACTTGTAAGTCCCGTATGTATTaGTGCATTGCTGGCTACAGGGAAAGCCTGAAGAGCATTCATCAA +
Preference number: 5 (lower is better)
Translates to: FHTHLYRGTCKSRMY*CIAGYRESLKSIHQ
Trigger: TTGATGAATGCTCTTCAGGCTTTCCCTGTAGCCAGCAATGCATCAATACATACGGGACTTACAAGTGCCTCTGTACAGATGGGTATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp CGTTGGACAGACACATTCAACACTTCCATCATCCCCAATGGTACATaGTTCAGAATTCACACAATAGTGGTGGCACACGTAGTACTGACA +
Preference number: 5 (lower is better)
Translates to: RWTDTFNTSIIPNGT*FRIHTIVVAHVVLT
Trigger: TGTCAGTACTACGTGTGCCACCACTATTGTGTGAATTCTGAATCATGTACCATTGGGGATGATGGAAGTGTTGAATGTGTCTGTCCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS GCA 90 bp CACAACTGCAAGTGTAGGATCCATGTGTGTTTCTGCAGGTCTGGCTaGATGTACCATAAACAGCACATTCATCTTGATCTTTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: HNCKCRIHVCFCRSG*MYHKQHIHLDLYSF
Trigger: GAAGCTGTAAAGATCAAGATGAATGTGCTGTTTATGGTACATGCAGCCAGACCTGCAGAAACACACATGGATCCTACACTTGCAGTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp TACAGGGAAAGCCTGAAGAGCATTCATCAATGTCTACACATGTTTTaGCGTCATCCTTCAGTTGGAATCCAGGCCAGCATTTGCACTTAT +
Preference number: 5 (lower is better)
Translates to: YRESLKSIHQCLHMF*RHPSVGIQASICTY
Trigger: ATAAGTGCAAATGCTGGCCTGGATTCCAACTGAAGGATGACGGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCTTTCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp CAGGAACAATTCACTCTCCCATTGGGAGTTAAAAGGCACAAGTCATaGCAGCCTCCATTCAATAATGCACATGGAGAAAGTTCACAGCTA +
Preference number: 5 (lower is better)
Translates to: QEQFTLPLGVKRHKS*QPPFNNAHGESSQL
Trigger: TAGCTGTGAACTTTCTCCATGTGCATTATTGAATGGAGGCTGCCATGACTTGTGCCTTTTAACTCCCAATGGGAGAGTGAATTGTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGACACATACAGAACCGTaGGAATTACAAACAAAGATC +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLTHTEP*ELQTKI
Trigger: GATCTTTGTTTGTAATTCCAACGGTTCTGTATGTGT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTATAAAGATGTCTAACTaGTCTGCCTTGAATGACAGT +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTIKMSN*SALNDS
Trigger: ACTGTCATTCAAGGCAGACAAGTTAGACATCTTTAT...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGGCAGGAATTGCTGCCTaGCTGTGCTTCTTTATCATA +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLAGIAA*LCFFII
Trigger: TATGATAAAGAAGCACAGCAAGGCAGCAATTCCTGC...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATCAAAGCATCCATTTaGTCACTTGGTTCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAIKASI*SLGSRG
Trigger: ACCTCTTGAACCAAGTGACAAAATGGATGCTTTGAT...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTCTGTGGCATCATTCTaGTGGCCCCTTCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKSVASF*WPLLTD
Trigger: GTCTGTCAGAAGGGGCCACAAGAATGATGCCACAGA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTCGATAAAGACAGAGTaGCTTACAGCCACCATTGTC +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLSIKTE*LTATIV
Trigger: GACAATGGTGGCTGTAAGCAACTCTGTCTTTATCGA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGATGGTCACAAACAAATaGCTTGGGAATGCATACTTT +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLMVTNK*LGNAYF
Trigger: AAAGTATGCATTCCCAAGCAATTTGTTTGTGACCAT...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCAGAATGGAATACATTaGTCAGTTTTGCAACGAAAC +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTQNGIH*SVLQRN
Trigger: GTTTCGTTGCAAAACTGACAAATGTATTCCATTCTG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTCATCTTCCCCATATTaGCAGTCTTCATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLSSSPY*QSSWPS
Trigger: TGATGGCCATGAAGACTGCAAATATGGGGAAGATGA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCCCTTTTTACAAGGCCTaGCTTTATATGTCAGCTTAC +
Preference number: 5 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSPFYKA*LYMSAY
Trigger: GTAAGCTGACATATAAAGCAAGGCCTTGTAAAAAGG...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTCCACATTTATACATaGATGGGAACATGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTFHIYT*MGTCAK
Trigger: TTTGGCACATGTTCCCATCAATGTATAAATGTGGAA...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAAACAGGCTGTCATCATaGCAGGTGCCATTAATCAAA +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKNRLSS*QVPLIK
Trigger: TTTGATTAATGGCACCTGCAATGATGACAGCCTGTT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp ACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTCAGAGATTCTCCTCGTaGATTAAGTACAACCAAAAA +
Preference number: 5 (lower is better)
Translates to: TQRNLNTRATGTAFRLSTQRFSS*IKYNQK
Trigger: TTTTTGGTTGTACTTAATCAACGAGGAGAATCTCTG...AGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGCAGAGATTCTCCTCGTaGATTAAGTACAACCAAAAA +
Preference number: 5 (lower is better)
Translates to: CKYPMPCCALGWLFISRLQRFSS*IKYNQK
Trigger: TTTTTGGTTGTACTTAATCAACGAGGAGAATCTCTG...CAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTTCGACTCTCCACTTTaGATTATGGGAAGATCATTG +
Preference number: 5 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSFDSPL*IMGRSL
Trigger: CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp CACATTTGCTCCGACTGTAGGCATATTCTGTTATTTCTGCATCTGTaGGGTCTCGTGGATGGACAAAGAAATTTGACACACATATCAGGG +
Preference number: 5 (lower is better)
Translates to: HICSDCRHILLFLHL*GLVDGQRNLTHISG
Trigger: CCCTGATATGTGTGTCAAATTTCTTTGTCCATCCACGAGACCTCACAGATGCAGAAATAACAGAATATGCCTACAGTCGGAGCAAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp ATCCTTCTCAGTGTACCATCCATGGCTGCTTCTTCTATATGGGAATaGTCCCCAACAACAGTCCAGTACATCATCCCTCTTTTAGGATTT +
Preference number: 5 (lower is better)
Translates to: ILLSVPSMAASSIWE*SPTTVQYIIPLLGF
Trigger: AAATCCTAAAAGAGGGATGATGTACTGGACTGTTGTTGGGGATCATTCCCATATAGAAGAAGCAGCCATGGATGGTACACTGAGAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp ATTCTGGCAGTAGTTGCTACAGTGGTTGACTTCACATCTTTCTCCTaGATAACTGGGCCAACAGTGACACCTCAAATCACCTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: ILAVVATVVDFTSFS*ITGPTVTPQITFLI
Trigger: AATGAGAAAGGTGATTTGAGGTGTCACTGTTGGCCCAGTTATTCAGGAGAAAGATGTGAAGTCAACCACTGTAGCAACTACTGCCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CCA 90 bp CAGTGCCATTTGCTGCTAATGCATCTTCCACTTTTGCATACGAATTaGGTTAGTGGCTCACAAGTTGGGAATTCACAAGATGCCATTTCA +
Preference number: 5 (lower is better)
Translates to: QCHLLLMHLPLLHTN*VSGSQVGNSQDAIS
Trigger: TGAAATGGCATCTTGTGAATTCCCAACTTGTGAGCCACTAACCCAATTCGTATGCAAAAGTGGAAGATGCATTAGCAGCAAATGGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp ATTAGTGTAGTTCTTAGGGAGCCATCTAGTTTGGCCACTTCGATTTaGTCCAGATTGCTGTCTATCCAGTATATGTTTCCTGCTATCCAG +
Preference number: 5 (lower is better)
Translates to: ISVVLREPSSLATSI*SRLLSIQYMFPAIQ
Trigger: CTGGATAGCAGGAAACATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCTCCCTAAGAACTACACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS-3UTR CAA 90 bp GAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTCACATTGTGGAAGGATaGAAGAATATTGATTGTCCA +
Preference number: 5 (lower is better)
Translates to: EEIPKMQVPNALLCSRLAHIVEG*KNIDCP
Trigger: TGGACAATCAATATTCTTCAATCCTTCCACAATGTG...AGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCTGGCTGCTCTGTCTTaGAATCAATTATCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLLAALS*NQLSLF
Trigger: GAACAAGGATAATTGATTCAAAGACAGAGCAGCCAG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTCATTCTTTGGTCTTTaGCATGACCTGCCATCACTT +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLSFFGL*HDLPSL
Trigger: AAGTGATGGCAGGTCATGCAAAAGACCAAAGAATGA...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGAGTCGCAGTGCCATTaGCTGCTAATGCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELESQCH*LLMHLP
Trigger: TGGAAGATGCATTAGCAGCAAATGGCACTGCGACTC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACCAATCCTTTTTCCCATaGCAGAGTTTCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYQSFFP*QSFSGC
Trigger: GCAGCCAGAGAAACTCTGCAATGGGAAAAAGGATTG...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTTAACCTCCTTCAGGTaGACTCCAAGGCCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDLTSFR*TPRPVL
Trigger: GAGAACCGGCCTTGGAGTCAACCTGAAGGAGGTTAA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTCGGAACGAAGAATTTTaGTATCTCCTCCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCRNEEF*YLLLCT
Trigger: AGTACACAGGAGGAGATACAAAAATTCTTCGTTCCG...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp AAAACCCAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCTTTGGAGACATCAGGTaGTCTATAAGAATGATACAC +
Preference number: 5 (lower is better)
Translates to: KTQRNLNTRATGTAFRLSFGDIR*SIRMIH
Trigger: GTGTATCATTCTTATAGACAACCTGATGTCTCCAAA...GGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTGGCTGGCTGTGCAGTaGGATAAGCAAGTCCTATTA +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYWLAVQ*DKQVLL
Trigger: TAATAGGACTTGCTTATCCAACTGCACAGCCAGCCA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCAAGTACCCAATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTTTCCACATTTATACATaGATGGGAACATGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: MQVPNALLCSRLAIYLETFHIYT*MGTCAK
Trigger: TTTGGCACATGTTCCCATCAATGTATAAATGTGGAA...AGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTCAGCTGCCCTACGTaGATAGAGTACCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKFSCPT*IEYLRL
Trigger: CAGTCTGAGGTACTCTATCAACGTAGGGCAGCTGAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp CACATGGAGAAAGTTCACAGCTATTGGTGTCATTGGCAACAGCTATaGTTCCCATTGGCTGATGTGGAATATCGGAACGAAGAATTTTTG +
Preference number: 5 (lower is better)
Translates to: HMEKVHSYWCHWQQL*FPLADVEYRNEEFL
Trigger: CAAAAATTCTTCGTTCCGATATTCCACATCAGCCAATGGGAATCATAGCTGTTGCCAATGACACCAATAGCTGTGAACTTTCTCCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp GTTTTTCATCTGATTTATCTTTACAGTGAGGAATGCCATCACAGGTaGGCTGGTAGTCAATGCACTCACCATTTCCACATTCAAACTCCG +
Preference number: 5 (lower is better)
Translates to: VFHLIYLYSEECHHR*AGSQCTHHFHIQTP
Trigger: CGGAGTTTGAATGTGGAAATGGTGAGTGCATTGACTACCAGCTCACCTGTGATGGCATTCCTCACTGTAAAGATAAATCAGATGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp GAAGAATCACAGTGGAATTCATCACGTCCATCCTCACAATCTTTCTaGCCATCGCATATCCAGGTATTCAAAATGCATCTTCCACTAGGA +
Preference number: 5 (lower is better)
Translates to: EESQWNSSRPSSQSF*PSHIQVFKMHLPLG
Trigger: TCCTAGTGGAAGATGCATTTTGAATACCTGGATATGCGATGGTCAGAAAGATTGTGAGGATGGACGTGATGAATTCCACTGTGATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp ATGTACATGTCTGTGGCTTACAGTTTTCTTCATCTGAATTATCACTaGAGTCATTTTGGCTATCACACCGCCAGTGATCGGGAATACAGT +
Preference number: 5 (lower is better)
Translates to: MYMSVAYSFLHLNYH*SHFGYHTASDREYS
Trigger: ACTGTATTCCCGATCACTGGCGGTGTGATAGCCAAAATGACTGCAGTGATAATTCAGATGAAGAAAACTGTAAGCCACAGACATGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTCCAGTCAATCGCCATTaGTTGCACATTGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELPVNRH*LHIVEG
Trigger: TCCTTCCACAATGTGCAACAAATGGCGATTGACTGG...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGGAACAACTCATTCTTaGGTCTTTTGCATGACCTGC +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYGTTHS*VFCMTC
Trigger: GCAGGTCATGCAAAAGACCAAAGAATGAGTTGTTCC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CAGAGAAACCTGAATACCAGAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGCAATGTCACCTCACTaGTTATCAAATCTAGTTGAA +
Preference number: 5 (lower is better)
Translates to: QRNLNTRATGTAFRLSTFAMSPH*LSNLVE
Trigger: TTCAACTAGATTTGATAACAAGTGAGGTGACATTGC...AAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTCACAAAGCCATCTCTaGGGGATGCAGCGATTATTC +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKSQSHL*GMQRLF
Trigger: GAATAATCGCTGCATCCCCAAGAGATGGCTTTGTGA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGCCCTGTTGTGCTCTAGGCTGGCTATTTATCTCGAGACTGAGGGAGAATAAAAATCGTATGGTACCATaGCAACCTTTTTCATCACTA +
Preference number: 5 (lower is better)
Translates to: MPCCALGWLFISRLRENKNRMVP*QPFSSL
Trigger: TAGTGATGAAAAAGGTTGCAATGGTACCATACGATT...TTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTGCTACAGCCTCCATaGTTCAGCGAACACTCATCA +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKLLQPP*FSEHSS
Trigger: TGATGAGTGTTCGCTGAACAATGGAGGCTGTAGCAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACCATCCATTTTGTCACTaGGTTCAAGAGGTATTCCCC +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYHPFCH*VQEVFP
Trigger: GGGGAATACCTCTTGAACCAAGTGACAAAATGGATG...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTCCAATACAGGGCATTaGTCCCCATTCAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELSNTGH*SPFSPE
Trigger: TTCTGGACTGAATGGGGACAAATGCCCTGTATTGGA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACCTCCTGTGTACTTGTaGGACCGCAGTATAGCTCTT +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLPPVYL*DRSIAL
Trigger: AAGAGCTATACTGCGGTCCAACAAGTACACAGGAGG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTGCGGAACAAGCAAATaGGTTCCAAGAGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYCGTSK*VPRARR
Trigger: TCTTCTTGCTCTTGGAACCAATTTGCTTGTTCCGCA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCCACAGTCATCCTTATaGTCGCAAAGACCTCCACTG +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNPQSSL*SQRPPL
Trigger: CAGTGGAGGTCTTTGCGACAATAAGGATGACTGTGG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAATCACTGCAGTCATTTaGGCTATCACACCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLITAVI*AITPPV
Trigger: CACTGGCGGTGTGATAGCCAAAATGACTGCAGTGAT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACCATTCATCAATCCCATaGCACATTTGCTCCGACTGT +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYHSSIP*HICSDC
Trigger: ACAGTCGGAGCAAATGTGCAATGGGATTGATGAATG...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATAGCAATGTAGAGAACTaGATCTTCAGAGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNSNVEN*IFRAFC
Trigger: GCAGAAGGCTCTGAAGATCAAGTTCTCTACATTGCT...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACGTTCTCCAGCCATATTaGTTAAGAGTCTGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYVLQPY*LRVWCS
Trigger: ACTGCACCAGACTCTTAACAAATATGGCTGGAGAAC...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTGTCAACCTCACATTTaGGTCCTTCATAGCGCGTTG +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELCQPHI*VLHSAL
Trigger: CAACGCGCTATGAAGGACCAAAATGTGAGGTTGACA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp AAAAGTTTTCCTGCTATTGGATCTACTGCTATTGCTTTAGGATTGTaGAGCTCCAGATCAATCAGGGTGACACATACAGAACCGTTGGAA +
Preference number: 5 (lower is better)
Translates to: KSFPAIGSTAIALGL*SSRSIRVTHTEPLE
Trigger: TTCCAACGGTTCTGTATGTGTCACCCTGATTGATCTGGAGCTTCACAATCCTAAAGCAATAGCAGTAGATCCAATAGCAGGAAAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp ATACAGTGTCTGTTTTTGCAGCGAAACTCTCCAGCTTTACATATGTaGGGTAGTGCTTCTCCAGGATTAAATGTGCAAGTTGTCCCATTT +
Preference number: 5 (lower is better)
Translates to: IQCLFLQRNSPALHM*GSASPGLNVQVVPF
Trigger: AAATGGGACAACTTGCACATTTAATCCTGGAGAAGCACTACCTCACATATGTAAAGCTGGAGAGTTTCGCTGCAAAAACAGACACTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp ATAGTAAGTCCATTTGGAGTGAGTATGTCTGTACTGACCACCACTTaGGCATTTTTCCCAGTCAGAGTAGATCTCATGATACTTGGATGT +
Preference number: 5 (lower is better)
Translates to: IVSPFGVSMSVLTTT*AFFPVRVDLMILGC
Trigger: ACATCCAAGTATCATGAGATCTACTCTGACTGGGAAAAATGCTCAAGTGGTGGTCAGTACAGACATACTCACTCCAAATGGACTTACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 90 bp AGCCATCTAATTGGAATACAGTGGGCTTTATTTTTGCACCGAAACTaGTCTTCCTTACATTCAGTCACACAGTCCATCTCATCTGAACCA +
Preference number: 5 (lower is better)
Translates to: SHLIGIQWALFLHRN*SSLHSVTQSISSEP
Trigger: TGGTTCAGATGAGATGGACTGTGTGACTGAATGTAAGGAAGATCAGTTTCGGTGCAAAAATAAAGCCCACTGTATTCCAATTAGATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp TTCATCAGCTATCTTGGTATTCAAGTCCATTCCTCTAACAATTCCTaGGCGTCCTTTCCCATAAAAGAGGAACAACTCATTCTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: FISYLGIQVHSSNNS*ASFPIKEEQLILWS
Trigger: AGACCAAAGAATGAGTTGTTCCTCTTTTATGGGAAAGGACGCCCAGGAATTGTTAGAGGAATGGACTTGAATACCAAGATAGCTGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTTGGTTGAGTTCTTTTTaGATAAATTCGGATTCCCCA +
Preference number: 5 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCWLSSF*INSDSP
Trigger: TGGGGAATCCGAATTTATCAAAAAAGAACTCAACCA...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTGGCCACAGCATCTTaGAAGTCACAAAAATCTGCC +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKLATAS*KSQKSA
Trigger: GGCAGATTTTTGTGACTTCAAAGATGCTGTGGCCAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACCAGAGTTAAACCGTTaGGCCACAGCATCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLPELNR*ATASLK
Trigger: CTTCAAAGATGCTGTGGCCAAACGGTTTAACTCTGG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GAGCAACTGGCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGCATATTGTCACCTTGTaGCTTTCGTGGATCATAAAT +
Preference number: 5 (lower is better)
Translates to: EQLAQHFDSPLLIMGRSLHIVTL*LSWIIN
Trigger: ATTTATGATCCACGAAAGCAACAAGGTGACAATATG...CAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTATTTTCATCCAAAAGTaGATTATCGGCACAAGCACA +
Preference number: 5 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCIFIQK*IIGTST
Trigger: TGTGCTTGTGCCGATAATCAACTTTTGGATGAAAAT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATCTCCAACAGGAAAACTaGGTTTTGTGGTCACACAAT +
Preference number: 5 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNLQQEN*VLWSHN
Trigger: ATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAG...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTTAGCACAAGGATGCTaGGGTGGTCCACACAAGAAA +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDLAQGC*GGPHKK
Trigger: TTTCTTGTGTGGACCACCCAAGCATCCTTGTGCTAA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTAAAGAATTCCATATCTaGGGTCCAAAGCAATGGCCC +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELKEFHI*GPKQWP
Trigger: GGGCCATTGCTTTGGACCCAAGATATGGAATTCTTT...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTAAGTTAAAGTATGGATaGTCAATATCCACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCKLKYG*SISTPL
Trigger: CAGAGGAGTGGATATTGACAATCCATACTTTAACTT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGGAAAACATATCCACATaGCTTCCTGACAGCACCATC +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKENIST*LPDSTI
Trigger: GATGGTGCTGTCAGGAAGCAATGTGGATATGTTTTC...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATTTAGTCACACATCTGTaGTCCTCTAGCAATATTCGG +
Preference number: 5 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNLVTHL*SSSNIR
Trigger: CCGAATATTGCTAGAGGACAACAGATGTGTGACTAA...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGCATCGTGCTGATCTaGGAATACAAGTCCCATCTG +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLCIVLI*EYKSHL
Trigger: CAGATGGGACTTGTATTCCAAGATCAGCACGATGCA...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp ATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGCCCTGTTGTATAGGTCTAGAAATCTaGGTTTCTATGACAACACTC +
Preference number: 5 (lower is better)
Translates to: MDVTGKKYLRCKYPMPCCIGLEI*VSMTTL
Trigger: GAGTGTTGTCATAGAAACCAAGATTTCTAGACCTAT...ACAACAGGGCATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGTCTTTTTATCGCAGTaGGCCTCGTCTGATGCATCT +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNVFLSQ*ASSDAS
Trigger: AGATGCATCAGACGAGGCCAACTGCGATAAAAAGAC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGAAACACAGTCCCCATaGGCACAGAGGAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLETQSP*AQRKSF
Trigger: GAAAGATTTCCTCTGTGCCAATGGGGACTGTGTTTC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTGCAGGTTCCTCCATTTaGACAAAAATCCTCACAGAC +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELAGSSI*TKILTD
Trigger: GTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGC...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTGTCAACCTCACATTTaGGTCCTTCATAGCGCGTTG +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDCQPHI*VLHSAL
Trigger: CAACGCGCTATGAAGGACCAAAATGTGAGGTTGACA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp TCCACTCTTCCCAAGCCATTGGTAATGATATCTTCTTTCCAAGTCTaGTCTCTTTTAGCTCTGCTAATTTTATTGAAGCCCATGTCTGTC +
Preference number: 5 (lower is better)
Translates to: STLPKPLVMISSFQV*SLLALLILLKPMSV
Trigger: GACAGACATGGGCTTCAATAAAATTAGCAGAGCTAAAAGAGATCAGACTTGGAAAGAAGATATCATTACCAATGGCTTGGGAAGAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp CTTTTTCAATATGATCGTAATAGGCATCACACCAGTATAATGTGTTaGTGTGAAAGTCCAGAGTTAAACCGTTTGGCCACAGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: LFQYDRNRHHTSIMC*CESPELNRLATASL
Trigger: CAAAGATGCTGTGGCCAAACGGTTTAACTCTGGACTTTCACACCAACACATTATACTGGTGTGATGCCTATTACGATCATATTGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 90 bp TTCGACAGTTTTGCCCATCCATATATAATTTTGCATATACCGGATTaGAGTAATTTGTTGGCCCAGCAGTTAGTGGTCCTTTCAAATCAG +
Preference number: 5 (lower is better)
Translates to: FDSFAHPYIILHIPD*SNLLAQQLVVLSNQ
Trigger: CTGATTTGAAAGGACCACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTTGAATCAATTATCCTaGTTCGGTTCATCCCATCCA +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYLNQLS*FGSSHP
Trigger: TGGATGGGATGAACCGAACAAGGATAATTGATTCAA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTTTGGCCACTTCGATTaGGTCCAGATTGCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDFGHFD*VQIAVY
Trigger: ATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTATGGGCACAAAGTTACCACCATCCAGGTaGCATCTATTTATGGTTCCA +
Preference number: 5 (lower is better)
Translates to: CESYIFSAESESIFMGTKLPPSR*HLFMVP
Trigger: TGGAACCATAAATAGATGCAACCTGGATGGTGGTAA...CTTTGTGCCCATAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATGAAAGTTCACAGCTATaGGTGTCATTGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDESSQL*VSLATA
Trigger: AGCTGTTGCCAATGACACCAATAGCTGTGAACTTTC...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGTGCAGTCTGTGTTATaGCAGTTCTTTTCATCTGAA +
Preference number: 5 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNVQSVL*QFFSSE
Trigger: TTCAGATGAAAAGAACTGCAATAACACAGACTGCAC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGGAAACTTCAGCCTTTaGCTAACGAGTATAGTAGGG +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNGNFSL*LTSIVG
Trigger: CCCTACTATACTCGTTAGCAAAAGGCTGAAGTTTCC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACGTTCTCCAGCCATATTaGTTAAGAGTCTGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNVLQPY*LRVWCS
Trigger: ACTGCACCAGACTCTTAACAAATATGGCTGGAGAAC...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATCCGGATTGGAGTAATTaGTTGGCTTTGTTGGGTCTA +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDPDWSN*LALLGL
Trigger: TAGACCCAACAAAGCCAACAAATTACTCCAATCCGG...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS GCA 90 bp ATCGAAGTCTATCACAGTAACGTCATCAATATCAGGGACTGTAAATaGCGTGATGAAGTTAAAGTATGGATTGTCAATATCCACTCCTCT +
Preference number: 5 (lower is better)
Translates to: IEVYHSNVINIRDCK*RDEVKVWIVNIHSS
Trigger: AGAGGAGTGGATATTGACAATCCATACTTTAACTTCATCACGGCATTTACAGTCCCTGATATTGATGACGTTACTGTGATAGACTTCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 90 bp CAAATCCAATGCTTAGAAATACATTTTTGTGCGGAACAAGCAAATTaGTTCCAAGAGCAAGAAGAATCACAGTGGAATTCATCACGTCCA +
Preference number: 5 (lower is better)
Translates to: QIQCLEIHFCAEQAN*FQEQEESQWNSSRP
Trigger: TGGACGTGATGAATTCCACTGTGATTCTTCTTGCTCTTGGAACCAATTTGCTTGTTCCGCACAAAAATGTATTTCTAAGCATTGGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACTGGTTGATCCAGGCCTaGGGAAATAATTACATAACG +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNWLIQA*GNNYIT
Trigger: CGTTATGTAATTATTTCCCAAGGCCTGGATCAACCA...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACTGTCTGTCTTCCCAGTaGTCTTTAATAAGCTGTATA +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYCLSSQ*SLISCI
Trigger: TATACAGCTTATTAAAGACAACTGGGAAGACAGACA...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp CTTCCACAAAATGGATGTGACTGGGAAGAAATACCTAAGATGCAAGTACCCAATGATCTTTGGAACAACTaGTCTCACAATTTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: LPQNGCDWEEIPKMQVPNDLWNN*SHNFSH
Trigger: ATGAGAGAAATTGTGAGACAAGTTGTTCCAAAGATC...ATTGGGTACTTGCATCTTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAAACAGGCTGTCATCATaGCAGGTGCCATTAATCAAA +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLNRLSS*QVPLIK
Trigger: TTTGATTAATGGCACCTGCAATGATGACAGCCTGTT...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp GCACAGCATTTCGACTCTCCACTTTTGATTATGGGAAGATCATTGTTCTTCTACCAGCATTGTTGTAAATaGTACTGTAGTGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: AQHFDSPLLIMGRSLFFYQHCCK*YCSAVL
Trigger: AAGAACTGCACTACAGTACAATTTACAACAATGCTG...GTAGAAGAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACAACTTGGAAGGCCCTaGAATATATTTTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLQLGRP*NIFWIG
Trigger: CCCTATCCAAAATATATTCAAGGGCCTTCCAAGTTG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 90 bp AGTCAATCGCCATTTGTTGCACATTGTGGAAGGATTGAAGAATATTaGTTGTCCATTCATCTGTTAATCCTCCTGCTTTTGTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: SQSPFVAHCGRIEEY*LSIHLLILLLLLSG
Trigger: TCCAGATAACAAAAGCAGGAGGATTAACAGATGAATGGACAATCAATATTCTTCAATCCTTCCACAATGTGCAACAAATGGCGATTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATTCTAACTTGTCTGCCTaGAATGACAGTGTGTCTATT +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDSNLSA*NDSVSI
Trigger: AATAGACACACTGTCATTCAAGGCAGACAAGTTAGA...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TCATCTATTGGTTGGCAATCTAAGGCTAATTTCAAAGCAGGTGATGCTGAACTTTATTCATCAGCTATCTaGGTATTCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: SSIGWQSKANFKAGDAELYSSAI*VFKSIP
Trigger: AGGAATGGACTTGAATACCAAGATAGCTGATGAATA...AAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCAAAAGGATCAACACTaGTACAACTTTCACCGTCTA +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNQKDQH*YNFHRL
Trigger: TAGACGGTGAAAGTTGTACAAGTGTTGATCCTTTTG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATACTCTTCCCAAGCCATaGGTAATGATATCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDTLPKP*VMISSF
Trigger: GAAAGAAGATATCATTACCAATGGCTTGGGAAGAGT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTACAACCGTGGCACAGGTaGAAACTTTACAATCTAATT +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLQPWHR*KLYNLI
Trigger: AATTAGATTGTAAAGTTTCAACCTGTGCCACGGTTG...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACAAAGTTTTCCTGCTATaGGATCTACTGCTATTGCTT +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNKVFLL*DLLLLL
Trigger: AAGCAATAGCAGTAGATCCAATAGCAGGAAAACTTT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp GATGCTGAACTTGTGAGAGCTATATATTTTCAGCAGAGTCTGAATCGATCTTTAGAAAATCAAGTGCTATaGTGTTTCTCAATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: DAELVRAIYFQQSLNRSLENQVL*CFSIQE
Trigger: TTCCTGGATTGAGAAACACAATAGCACTTGATTTTC...TAAAGATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACATTTGGGTTATCAGGTaGTATTTCATACCCATCTGT +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNIWVIR*YFIPIC
Trigger: ACAGATGGGTATGAAATACAACCTGATAACCCAAAT...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TGGGAAGATCATTGTTCTTCTACAACTTGGAAGGCCCTTGAATATATTTTGGATACCCAGAAATGTAGTTaGCAGAGAGAATTATTGCAA +
Preference number: 5 (lower is better)
Translates to: WEDHCSSTTWKALEYILDTQKCS*QRELLQ
Trigger: TTGCAATAATTCTCTCTGCAAACTACATTTCTGGGT...ATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAAGAACAATGATCTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS-3UTR CAA 90 bp TTCAAACCGTATAATGGAAAAGTGCAGAGATTCTCCTCGTTGATTAAGTACAACCAGCATTGTTGTAAATaGTACTGTAGTGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: FKPYNGKVQRFSSLIKYNQHCCK*YCSAVL
Trigger: AAGAACTGCACTACAGTACAATTTACAACAATGCTG...GTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS GCA 90 bp TCTGTCTTCCCAGTTGTCTTTAATAAGCTGTATATTTCCAAAGTGTaGATCACTGTAAAAGATTCGGTTGGTACCTTTTCTTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: SVFPVVFNKLYISKV*ITVKDSVGTFSSLI
Trigger: AATCAAAGAAGAAAAGGTACCAACCGAATCTTTTACAGTGATGCACACTTTGGAAATATACAGCTTATTAAAGACAACTGGGAAGACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 90 bp ACCATGGCCAAATTTTTGAACTCGAAATACACCATTTTTAGGTCCTaGTCCATATATATAATCTTCAAAGATATCGATCCTATGTGGATG +
Preference number: 5 (lower is better)
Translates to: TMAKFLNSKYTIFRS*SIYIIFKDIDPMWM
Trigger: CATCCACATAGGATCGATATCTTTGAAGATTATATATATGGAGCAGGACCTAAAAATGGTGTATTTCGAGTTCAAAAATTTGGCCATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CCA 90 bp ACCTCCATCGTTGTGATCATGATCTACCTCATACATGTTATAAGATaGATTGCCAATTTCTACATTTATTCCTCCATTGATAATAGGTTG +
Preference number: 5 (lower is better)
Translates to: TSIVVIMIYLIHVIR*IANFYIYSSIDNRL
Trigger: CAACCTATTATCAATGGAGGAATAAATGTAGAAATTGGCAATCCATCTTATAACATGTATGAGGTAGATCATGATCACAACGATGGAGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS GCA 72 bp TTGTGGTCGCCCGGTAAGGAAGCCTGCGCTGGAGACTaGTCGGCGGCACCTTCGGCCCGGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: LWSPGKEACAGD*SAAPSARRRRR
Trigger: CCGCCGCCGCCGCCGGGCCGAAGGTGCCGCCGAGCAGTCTCCAGCGCAGGCTTCCTTACCGGGCGACCACAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp CTTCGGCCCGGCGGCGGCGGCGGCGGCAGGGGCCGCTaGGAGCCTGGAATCGAGCGGCGTCATTTACAAATG +
Preference number: 6 (lower is better)
Translates to: LRPGGGGGGRGR*EPGIERRHLQM
Trigger: CATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCCGCCGCCGCCGCCGGGCCGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 90 bp CGGCGGCACCTTCGGCCCGGCGGCGGCGGCGGCGGCAGGGGCCGCTaGGAGCCTGGAATCGAGCGGCGTCATTTACAAATGTCACTGGAA +
Preference number: 6 (lower is better)
Translates to: RRHLRPGGGGGGRGR*EPGIERRHLQMSLE
Trigger: TTCCAGTGACATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCCGCCGCCGCCGCCGGGCCGAAGGTGCCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp TTCGGCCCGGCGGCGGCGGCGGCGGCAGGGGCCGCTTaGAGCCTGGAATCGAGCGGCGTCATTTACAAATGT +
Preference number: 6 (lower is better)
Translates to: FGPAAAAAAGAA*SLESSGVIYKC
Trigger: ACATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCCGCCGCCGCCGCCGGGCCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp CGGCGGCGGCGGCGGCGGCAGGGGCCGCTTGGAGCCTaGAATCGAGCGGCGTCATTTACAAATGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: RRRRRRQGPLGA*NRAASFTNVTG
Trigger: TCCAGTGACATTTGTAAATGACGCCGCTCGATTCCAGGCTCCAAGCGGCCCCTGCCGCCGCCGCCGCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp GAAACTCGGACATTGTGGTCGCCCGGTAAGGAAGCCTaGGCTGGAGACTGCTCGGCGGCACCTTCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: ETRTLWSPGKEA*AGDCSAAPSAR
Trigger: CCGGGCCGAAGGTGCCGCCGAGCAGTCTCCAGCGCAGGCTTCCTTACCGGGCGACCACAATGTCCGAGTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp GTCAGCCTTCTCCTGCCTGGAGCAGGATGTGGAAGGTaGAGGGATGCGCGCGTGCGGGAGAGAGGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: VSLLLPGAGCGR*RDARVRERGGR
Trigger: TCTGCCTCCTCTCTCCCGCACGCGCGCATCCCTCCACCTTCCACATCCTGCTCCAGGCAGGAGAAGGCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 72 bp ATGCGCGCGTGCGGGAGAGAGGAGGCAGAGCGTGTGTaGGCGCGAGCGAGACGCCCGTGTGTCTTGACTTTT +
Preference number: 6 (lower is better)
Translates to: MRACGREEAERV*ARARRPCVLTF
Trigger: AAAAGTCAAGACACACGGGCGTCTCGCTCGCGCTCACACACGCTCTGCCTCCTCTCTCCCGCACGCGCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp CAAAGCCAATGTCGGGGCACGCAGGCACGAGAGCCCTaGCAGCTGAACATGTCAGCAGCACAGGTTATGGCA +
Preference number: 6 (lower is better)
Translates to: QSQCRGTQAREP*QLNMSAAQVMA
Trigger: TGCCATAACCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTGCGTGCCCCGACATTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp AATGTCGGGGCACGCAGGCACGAGAGCCCTGGCAGCTaGACATGTCAGCAGCACAGGTTATGGCACCACAAA +
Preference number: 6 (lower is better)
Translates to: NVGARRHESPGS*TCQQHRLWHHK
Trigger: TTTGTGGTGCCATAACCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTGCGTGCCCCGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp AGTTTAGGTAGATGGGCGGCGCTGTGTGTGGAAGCTTaGAAGCACTGGGTCCTCCCCCTATGTACCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SLGRWAALCVEA*KHWVLPLCTWP
Trigger: AGGCCAGGTACATAGGGGGAGGACCCAGTGCTTTCAAGCTTCCACACACAGCGCCGCCCATCTACCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp GCTGCTCTTTGGGGCTGGCCTTTCACACTGTGTGCCTaGCCAGTTGGTGGAGCATTTGCATCTCGGCTCATT +
Preference number: 6 (lower is better)
Translates to: AALWGWPFTLCA*PVGGAFASRLI
Trigger: AATGAGCCGAGATGCAAATGCTCCACCAACTGGTCAGGCACACAGTGTGAAAGGCCAGCCCCAAAGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442974.1
CDS GCA 72 bp ACTTGCTGCTCTTTGGGGCTGGCCTTTCACACTGTGTaGCTGACCAGTTGGTGGAGCATAGACACACAGGTA +
Preference number: 6 (lower is better)
Translates to: TCCSLGLAFHTV*LTSWWSIDTQV
Trigger: TACCTGTGTGTCTATGCTCCACCAACTGGTCAGGCACACAGTGTGAAAGGCCAGCCCCAAAGAGCAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CCA 72 bp ATGACAGCTTCCCTGTCAAATGCTCCAGGCCGAGTCTaGTCCACAGTGTGTCTGGTGATGGATGAGGTGGTA +
Preference number: 6 (lower is better)
Translates to: MTASLSNAPGRV*STVCLVMDEVV
Trigger: TACCACCTCATCCATCACCAGACACACTGTGGACCAGACTCGGCCTGGAGCATTTGACAGGGAAGCTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CTGACCAGTTGGTGGAGCATAGACACACAGGTACATTaGTCTCGGGGTCCAGCTGGCATGTGCCACCATTGT +
Preference number: 6 (lower is better)
Translates to: LTSWWSIDTQVH*SRGPAGMCHHC
Trigger: ACAATGGTGGCACATGCCAGCTGGACCCCGAGACAAATGTACCTGTGTGTCTATGCTCCACCAACTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS GCA 72 bp AGTCGTCTTCCCTGTCACACAGCCATGCTCTGGGAATaGAACGCCCATTTCCGCAAGAAAACTGGTCTACCT +
Preference number: 6 (lower is better)
Translates to: SRLPCHTAMLWE*NAHFRKKTGLP
Trigger: AGGTAGACCAGTTTTCTTGCGGAAATGGGCGTTGCATTCCCAGAGCATGGCTGTGTGACAGGGAAGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp AAGTTGATTATCGGCACAAGCACACACCCGGCCTCCTaGGATAGCCAAGCAAAGTGTACTACAGCCCCCATT +
Preference number: 6 (lower is better)
Translates to: KLIIGTSTHPAS*DSQAKCTTAPI
Trigger: AATGGGGGCTGTAGTACACTTTGCTTGGCTATCCCAGGAGGCCGGGTGTGTGCTTGTGCCGATAATCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp CCAGAAGTCTTATTCCGTAGGATGGTGGGGTTTCTTCCGTCTCTTTaGCTGCAGGTTCCTAGCTGGGCTAAGTTTTGGTCTGCCCACCAC +
Preference number: 6 (lower is better)
Translates to: PEVLFRRMVGFLPSL*LQVPSWAKFWSAHH
Trigger: GTGGTGGGCAGACCAAAACTTAGCCCAGCTAGGAACCTGCAGCAAAAGAGACGGAAGAAACCCCACCATCCTACGGAATAAGACTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp ACTCCAAGGCCGGTTCTCATGGTTATCGTTTCTGTGGCATCATTCTaGTGGCCCCTTCTGACAGACCCGTTTGCATGTGCTCTGTCAGAC +
Preference number: 6 (lower is better)
Translates to: TPRPVLMVIVSVASF*WPLLTDPFACALSD
Trigger: GTCTGACAGAGCACATGCAAACGGGTCTGTCAGAAGGGGCCACAAGAATGATGCCACAGAAACGATAACCATGAGAACCGGCCTTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CCATCACACAGCCAGCTCTGGGAGACACAAGTCACGTaGTCGTGGCAAAGAAATTCACCAGGATCACACAAC +
Preference number: 6 (lower is better)
Translates to: PSHSQLWETQVT*SWQRNSPGSHN
Trigger: GTTGTGTGATCCTGGTGAATTTCTTTGCCACGATCACGTGACTTGTGTCTCCCAGAGCTGGCTGTGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000434794.1
ENST00000486364.1
CDS TCA 72 bp CCCAGTGGCCTGGGATGCATCTGCCACTGGAACATCTaGACTGATTATCAAAGCAAGAGTGAACACAGCCCA +
Preference number: 6 (lower is better)
Translates to: PSGLGCICHWNI*TDYQSKSEHSP
Trigger: TGGGCTGTGTTCACTCTTGCTTTGATAATCAGTTCAGATGTTCCAGTGGCAGATGCATCCCAGGCCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp TTTGTTAAGAGTCTGGTGCAGTTGGGGCCATTCAGCTaGCCTACGTTGATAGAGTACCTCAGACTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: FVKSLVQLGPFS*PTLIEYLRLVQ
Trigger: CTGGACCAGTCTGAGGTACTCTATCAACGTAGGGCAGCTGAATGGCCCCAACTGCACCAGACTCTTAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CCA 72 bp TTCGGTCCCCTCTGCAGGAACAATTCACTCTCCCATTaGGAGTTAAAAGGCACAAGTCATGGCAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: FGPLCRNNSLSH*ELKGTSHGSLH
Trigger: ATGGAGGCTGCCATGACTTGTGCCTTTTAACTCCCAATGGGAGAGTGAATTGTTCCTGCAGAGGGGACCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CCGGTTCTCATGGTTATCGTTTCTGTGGCATCATTCTaGTGGCCCCTTCTGACAGACCCGTTTGCATGTGCT +
Preference number: 6 (lower is better)
Translates to: PVLMVIVSVASF*WPLLTDPFACA
Trigger: AGCACATGCAAACGGGTCTGTCAGAAGGGGCCACAAGAATGATGCCACAGAAACGATAACCATGAGAACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp CTGAAGCATCTGCACAATCTATGTTCTGGTTGCATCGTGCTGATCTaGGAATACAAGTCCCATCTGCACAGCGGAACTCAACCGTGGCAC +
Preference number: 6 (lower is better)
Translates to: LKHLHNLCSGCIVLI*EYKSHLHSGTQPWH
Trigger: GTGCCACGGTTGAGTTCCGCTGTGCAGATGGGACTTGTATTCCAAGATCAGCACGATGCAACCAGAACATAGATTGTGCAGATGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp TTGGTCTTTTGCATGACCTGCCATCACTTCCCAAGTTaGAGCCAGTCCTGCAGCGACAAGTCCGAGTTTTGT +
Preference number: 6 (lower is better)
Translates to: LVFCMTCHHFPS*SQSCSDKSEFC
Trigger: ACAAAACTCGGACTTGTCGCTGCAGGACTGGCTTCAACTTGGGAAGTGATGGCAGGTCATGCAAAAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CCATGCTATTCCCATGCTTACAAGGACAACCTTCTCTaGGCCATCCAAGCGAGCCTTTCCAATACAGGGCAT +
Preference number: 6 (lower is better)
Translates to: PCYSHAYKDNLL*AIQASLSNTGH
Trigger: ATGCCCTGTATTGGAAAGGCTCGCTTGGATGGCTCAGAGAAGGTTGTCCTTGTAAGCATGGGAATAGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp TCTGTCTGCTCCCGATGTTTTATGGGCACGGCTGAGTaGCTTGGTTTTCCCATCAGTCCAGTAGATGTAGTC +
Preference number: 6 (lower is better)
Translates to: SVCSRCFMGTAE*LGFPISPVDVV
Trigger: GACTACATCTACTGGACTGATGGGAAAACCAAGTCACTCAGCCGTGCCCATAAAACATCGGGAGCAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp AGAGTCTGTCTGCTCCCGATGTTTTATGGGCACGGCTaGGTGACTTGGTTTTCCCATCAGTCCAGTAGATGT +
Preference number: 6 (lower is better)
Translates to: RVCLLPMFYGHG*VTWFSHQSSRC
Trigger: ACATCTACTGGACTGATGGGAAAACCAAGTCACTCAGCCGTGCCCATAAAACATCGGGAGCAGACAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp AGGTCCACAAGTCTTTTTATCGCAGTTGGCCTCGTCTaGTGCATCTGCACAGTCTGGATCCTCGTCACAAAC +
Preference number: 6 (lower is better)
Translates to: RSTSLFIAVGLV*CICTVWILVTN
Trigger: GTTTGTGACGAGGATCCAGACTGTGCAGATGCATCAGACGAGGCCAACTGCGATAAAAAGACTTGTGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp ACACAGGTACATTTGTCTCGGGGTCCAGCTGGCATGTaGCACCATTGTAACAGTAGCCATCACATAACTGAC +
Preference number: 6 (lower is better)
Translates to: TQVHLSRGPAGM*HHCNSSHHITD
Trigger: GTCAGTTATGTGATGGCTACTGTTACAATGGTGGCACATGCCAGCTGGACCCCGAGACAAATGTACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS CCA 72 bp GGGTTTCTTCCGTCTCTTTTGCTGCAGGTTCCTAGCTaGGCTAAGTTTTGGTCTGCCCACCACAGTTTCTTA +
Preference number: 6 (lower is better)
Translates to: GFLPSLLLQVPS*AKFWSAHHSFL
Trigger: TAAGAAACTGTGGTGGGCAGACCAAAACTTAGCCCAGCTAGGAACCTGCAGCAAAAGAGACGGAAGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp GTTCTCATGGTTATCGTTTCTGTGGCATCATTCTTGTaGCCCCTTCTGACAGACCCGTTTGCATGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: VLMVIVSVASFL*PLLTDPFACAL
Trigger: CAGAGCACATGCAAACGGGTCTGTCAGAAGGGGCCACAAGAATGATGCCACAGAAACGATAACCATGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp GGTTCTCCAGCCATATTTGTTAAGAGTCTGGTGCAGTaGGGGCCATTCAGCTGCCCTACGTTGATAGAGTAC +
Preference number: 6 (lower is better)
Translates to: GSPAIFVKSLVQ*GPFSCPTLIEY
Trigger: GTACTCTATCAACGTAGGGCAGCTGAATGGCCCCAACTGCACCAGACTCTTAACAAATATGGCTGGAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CAA 90 bp GGCACAAGCACAAGTTCTCCGGGAATTTCCTCGATAAAGACAGAGTaGCTTACAGCCACCATTGTCCCTGGCACAAACATTGGTCCCTTT +
Preference number: 6 (lower is better)
Translates to: GTSTSSPGISSIKTE*LTATIVPGTNIGPF
Trigger: AAAGGGACCAATGTTTGTGCCAGGGACAATGGTGGCTGTAAGCAACTCTGTCTTTATCGAGGAAATTCCCGGAGAACTTGTGCTTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp TGCCATGAGGAATGCAGCGGCGATTATAGCATGGCTTaGAGCCTCTTCGACAGCTTCTGTTTTCACAGTAGA +
Preference number: 6 (lower is better)
Translates to: CHEECSGDYSMA*SLFDSFCFHSR
Trigger: TCTACTGTGAAAACAGAAGCTGTCGAAGAGGCTTCAAGCCATGCTATAATCGCCGCTGCATTCCTCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CATCTGTACAGAGGCACTTGTAAGTCCCGTATGTATTaGTGCATTGCTGGCTACAGGGAAAGCCTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: HLYRGTCKSRMY*CIAGYRESLKS
Trigger: GCTCTTCAGGCTTTCCCTGTAGCCAGCAATGCATCAATACATACGGGACTTACAAGTGCCTCTGTACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp GCGACTGGGATGGTATATCTGAAGGTCAAATGGCTGTaGACTGGTTTTCTGAATCACACTGACATTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ATGMVYLKVKWL*TGFLNHTDILP
Trigger: GGGCAGAATGTCAGTGTGATTCAGAAAACCAGTGCACAGCCATTTGACCTTCAGATATACCATCCCAGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp ATCGGTCCAGTAGAGTTTTCCCCTGACTGGGTGAGCTaGAAGACACTGTGGCTTATCGATTCCATGGATAAT +
Preference number: 6 (lower is better)
Translates to: IGPVEFSPDWVS*KTLWLIDSMDN
Trigger: ATTATCCATGGAATCGATAAGCCACAGTGTCTTGCAGCTCACCCAGTCAGGGGAAAACTCTACTGGACCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp ATAGCCTTCATGCCTCAGGCAAGTAACTCCATCTTCTaGCAAATATCCATGGGCACAAGCACAAGTTCTCCG +
Preference number: 6 (lower is better)
Translates to: IAFMPQASNSIF*QISMGTSTSSP
Trigger: CGGAGAACTTGTGCTTGTGCCCATGGATATTTGGCAGAAGATGGAGTTACTTGCCTGAGGCATGAAGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp AGCCTGGAATCGAGCGGCGTCATTTACAAATGTCACTaGAAATTCTTCAGCTCAATGAGTCCAGCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: SLESSGVIYKCH*KFFSSMSPASQ
Trigger: CTGACTGGCTGGACTCATTGAGCTGAAGAATTTCCAGTGACATTTGTAAATGACGCCGCTCGATTCCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp TCCAGAAAAGAATTCCATATCTTGGGTCCAAAGCAATaGCCCTGGGGTGTTCCATGGCTCCTGCTATTAGTG +
Preference number: 6 (lower is better)
Translates to: SRKEFHILGPKQ*PWGVPWLLLLV
Trigger: CACTAATAGCAGGAGCCATGGAACACCCCAGGGCCATTGCTTTGGACCCAAGATATGGAATTCTTTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp CAGCTTCTCTGCACGGTAGTCGATAGTAAGTCCATTTaGAGTGAGTATGTCTGTACTGACCACCACTTGAGC +
Preference number: 6 (lower is better)
Translates to: QLLCTVVDSKSI*SEYVCTDHHLS
Trigger: GCTCAAGTGGTGGTCAGTACAGACATACTCACTCCAAATGGACTTACTATCGACTACCGTGCAGAGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CTAGGTCTAGTGCCAGTGCAGCTGGCTGCTCTGTCTTaGAATCAATTATCCTTGTTCGGTTCATCCCATCCA +
Preference number: 6 (lower is better)
Translates to: LGLVPVQLAALS*NQLSLFGSSHP
Trigger: TGGATGGGATGAACCGAACAAGGATAATTGATTCAAAGACAGAGCAGCCAGCTGCACTGGCACTAGACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp GCAGTAAGGCTGGTTTCCAGCAGTCACAATGCAGGTTCCTCCATTTaGACAAAAATCCTCACAGACTGTCTTACCACAGTTTGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: AVRLVSSSHNAGSSI*TKILTDCLTTVWPS
Trigger: ACTGGGCCAAACTGTGGTAAGACAGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGCATTGTGACTGCTGGAAACCAGCCTTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS CAA 90 bp TTCTCCAGGATTAAATGTGCAAGTTGTCCCATTTTCATCCAAAAGTaGATTATCGGCACAAGCACACACCCGGCCTCCTGGGATAGCCAA +
Preference number: 6 (lower is better)
Translates to: FSRIKCASCPIFIQK*IIGTSTHPASWDSQ
Trigger: TTGGCTATCCCAGGAGGCCGGGTGTGTGCTTGTGCCGATAATCAACTTTTGGATGAAAATGGGACAACTTGCACATTTAATCCTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp GTTCTTAGGGAGCCATCTAGTTTGGCCACTTCGATTTGGTCCAGATaGCTGTCTATCCAGTATATGTTTCCTGCTATCCAGTCGACTGTC +
Preference number: 6 (lower is better)
Translates to: VLREPSSLATSIWSR*LSIQYMFPAIQSTV
Trigger: GACAGTCGACTGGATAGCAGGAAACATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCTCCCTAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 72 bp GGTCACCGACATGGTCCACAAAATAGAGATTTCGAGTaGGCCAGTCAATCGCCATTTGTTGCACATTGTGGA +
Preference number: 6 (lower is better)
Translates to: GHRHGPQNRDFE*ASQSPFVAHCG
Trigger: TCCACAATGTGCAACAAATGGCGATTGACTGGCTCACTCGAAATCTCTATTTTGTGGACCATGTCGGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp GGTCAAATGGCTGTGCACTGGTTTTCTGAATCACACTaGCATTCTGCCCTGTCCACTTATTGGCTTTGGACA +
Preference number: 6 (lower is better)
Translates to: GQMAVHWFSESH*HSALSTYWLWT
Trigger: TGTCCAAAGCCAATAAGTGGACAGGGCAGAATGTCAGTGTGATTCAGAAAACCAGTGCACAGCCATTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS TCA 72 bp TGGTCAGGACAGTCAAAGTCTCCATCACACTGCCATTaGGTATTTAGAAGACACCGCCCATCAGCACAACTA +
Preference number: 6 (lower is better)
Translates to: WSGQSKSPSHCH*VFRRHRPSAQL
Trigger: TAGTTGTGCTGATGGGCGGTGTCTTCTAAATACTCAATGGCAGTGTGATGGAGACTTTGACTGTCCTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp CCACACAACTGCAAGTGTAGGATCCATGTGTGTTTCTaGAGGTCTGGCTGCATGTACCATAAACAGCACATT +
Preference number: 6 (lower is better)
Translates to: PHNCKCRIHVCF*RSGCMYHKQHI
Trigger: AATGTGCTGTTTATGGTACATGCAGCCAGACCTGCAGAAACACACATGGATCCTACACTTGCAGTTGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp GAACAGACAATTCCTCTTCCAGGAACAACAGAACAGTaGTTGCTACAGCCTCCATTGTTCAGCGAACACTCA +
Preference number: 6 (lower is better)
Translates to: EQTIPLPGTTEQ*LLQPPLFSEHS
Trigger: TGAGTGTTCGCTGAACAATGGAGGCTGTAGCAACCACTGTTCTGTTGTTCCTGGAAGAGGAATTGTCTGTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CCA 72 bp TCTCTTTTGCTGCAGGTTCCTAGCTGGGCTAAGTTTTaGTCTGCCCACCACAGTTTCTTATCCATGATGGTT +
Preference number: 6 (lower is better)
Translates to: SLLLQVPSWAKF*SAHHSFLSMMV
Trigger: AACCATCATGGATAAGAAACTGTGGTGGGCAGACCAAAACTTAGCCCAGCTAGGAACCTGCAGCAAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp TATGAACTACCCCAGAAGTCTTATTCCGTAGGATGGTaGGGTTTCTTCCGTCTCTTTTGCTGCAGGTTCCTA +
Preference number: 6 (lower is better)
Translates to: YELPQKSYSVGW*GFFRLFCCRFL
Trigger: TAGGAACCTGCAGCAAAAGAGACGGAAGAAACCCCACCATCCTACGGAATAAGACTTCTGGGGTAGTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp ATGCAACGCCCATTTCCGCAAGAAAACTGGTCTACCTaGCATGTTCTGGAGGTATCTAAAGACTCGTCTGAA +
Preference number: 6 (lower is better)
Translates to: MQRPFPQENWST*HVLEVSKDSSE
Trigger: TTCAGACGAGTCTTTAGATACCTCCAGAACATGCCAGGTAGACCAGTTTTCTTGCGGAAATGGGCGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434794.1
CDS CAA 72 bp AGCTCCAGATCAATCAGGGTGACACATACAGAACCGTaGGAATTACAAACAAAGATCCGGTCACCGACATGG +
Preference number: 6 (lower is better)
Translates to: SSRSIRVTHTEP*ELQTKIRSPTW
Trigger: CCATGTCGGTGACCGGATCTTTGTTTGTAATTCCAACGGTTCTGTATGTGTCACCCTGATTGATCTGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CAGACAATTCCTCTTCCAGGAACAACAGAACAGTGGTaGCTACAGCCTCCATTGTTCAGCGAACACTCATCA +
Preference number: 6 (lower is better)
Translates to: QTIPLPGTTEQW*LQPPLFSEHSS
Trigger: TGATGAGTGTTCGCTGAACAATGGAGGCTGTAGCAACCACTGTTCTGTTGTTCCTGGAAGAGGAATTGTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp GAACGAAGAATTTTTGTATCTCCTCCTGTGTACTTGTaGGACCGCAGTATAGCTCTTCTTCCCCAGTCCGAC +
Preference number: 6 (lower is better)
Translates to: ERRIFVSPPVYL*DRSIALLPQSD
Trigger: GTCGGACTGGGGAAGAAGAGCTATACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TCGGAACGAAGAATTTTTGTATCTCCTCCTGTGTACTaGTTGGACCGCAGTATAGCTCTTCTTCCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SERRIFVSPPVY*LDRSIALLPQS
Trigger: GGACTGGGGAAGAAGAGCTATACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CTGCACAATCTATGTTCTGGTTGCATCGTGCTGATCTaGGAATACAAGTCCCATCTGCACAGCGGAACTCAA +
Preference number: 6 (lower is better)
Translates to: LHNLCSGCIVLI*EYKSHLHSGTQ
Trigger: TTGAGTTCCGCTGTGCAGATGGGACTTGTATTCCAAGATCAGCACGATGCAACCAGAACATAGATTGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp TCCATGGCTCCTGCTATTAGTGTAGTTCTTAGGGAGCCATCTAGTTaGGCCACTTCGATTTGGTCCAGATTGCTGTCTATCCAGTATATG +
Preference number: 6 (lower is better)
Translates to: SMAPAISVVLREPSS*ATSIWSRLLSIQYM
Trigger: CATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCTCCCTAAGAACTACACTAATAGCAGGAGCCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 90 bp TGTGGAATATCGGAACGAAGAATTTTTGTATCTCCTCCTGTGTACTaGTTGGACCGCAGTATAGCTCTTCTTCCCCAGTCCGACCAGAAT +
Preference number: 6 (lower is better)
Translates to: CGISERRIFVSPPVY*LDRSIALLPQSDQN
Trigger: ATTCTGGTCGGACTGGGGAAGAAGAGCTATACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTCCGATATTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp CTACAGGGAAAGCCTGAAGAGCATTCATCAATGTCTACACATGTTTaGCCGTCATCCTTCAGTTGGAATCCAGGCCAGCATTTGCACTTA +
Preference number: 6 (lower is better)
Translates to: LQGKPEEHSSMSTHV*PSSFSWNPGQHLHL
Trigger: TAAGTGCAAATGCTGGCCTGGATTCCAACTGAAGGATGACGGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCTTTCCCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp ACCTTACACACTTGTCAACCTCACATTTTGGTCCTTCATAGCGCGTaGGACAGACACATTCAACACTTCCATCATCCCCAATGGTACATG +
Preference number: 6 (lower is better)
Translates to: TLHTCQPHILVLHSA*DRHIQHFHHPQWYM
Trigger: CATGTACCATTGGGGATGATGGAAGTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGACCAAAATGTGAGGTTGACAAGTGTGTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS TCA 72 bp ATATTCAGTAGGAGCTATTCTGCATCCTTGCTCATCTaGACCATCTCCGCAGTCATCAAGTCGATCACACTG +
Preference number: 6 (lower is better)
Translates to: IFSRSYSASLLI*TISAVIKSITL
Trigger: CAGTGTGATCGACTTGATGACTGCGGAGATGGTTCAGATGAGCAAGGATGCAGAATAGCTCCTACTGAATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 72 bp AGTGTACCATCCATGGCTGCTTCTTCTATATGGGAATaGTCCCCAACAACAGTCCAGTACATCATCCCTCTT +
Preference number: 6 (lower is better)
Translates to: SVPSMAASSIWE*SPTTVQYIIPL
Trigger: AAGAGGGATGATGTACTGGACTGTTGTTGGGGATCATTCCCATATAGAAGAAGCAGCCATGGATGGTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS TCA 72 bp GTAGTTGCTACAGTGGTTGACTTCACATCTTTCTCCTaGATAACTGGGCCAACAGTGACACCTCAAATCACC +
Preference number: 6 (lower is better)
Translates to: VVATVVDFTSFS*ITGPTVTPQIT
Trigger: GGTGATTTGAGGTGTCACTGTTGGCCCAGTTATTCAGGAGAAAGATGTGAAGTCAACCACTGTAGCAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS GCA 72 bp AGCCTGAAGAGCATTCATCAATGTCTACACATGTTTTaGCGTCATCCTTCAGTTGGAATCCAGGCCAGCATT +
Preference number: 6 (lower is better)
Translates to: SLKSIHQCLHMF*RHPSVGIQASI
Trigger: AATGCTGGCCTGGATTCCAACTGAAGGATGACGGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp CTTGTCAACCTCACATTTTGGTCCTTCATAGCGCGTTaGACAGACACATTCAACACTTCCATCATCCCCAAT +
Preference number: 6 (lower is better)
Translates to: LVNLTFWSFIAR*TDTFNTSIIPN
Trigger: ATTGGGGATGATGGAAGTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGACCAAAATGTGAGGTTGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS CAA 72 bp GAGCCATCTAGTTTGGCCACTTCGATTTGGTCCAGATaGCTGTCTATCCAGTATATGTTTCCTGCTATCCAG +
Preference number: 6 (lower is better)
Translates to: EPSSLATSIWSR*LSIQYMFPAIQ
Trigger: CTGGATAGCAGGAAACATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp CCTGCTATTAGTGTAGTTCTTAGGGAGCCATCTAGTTaGGCCACTTCGATTTGGTCCAGATTGCTGTCTATC +
Preference number: 6 (lower is better)
Translates to: PAISVVLREPSS*ATSIWSRLLSI
Trigger: GATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCTCCCTAAGAACTACACTAATAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp ACAAGTTCTCCGGGAATTTCCTCGATAAAGACAGAGTaGCTTACAGCCACCATTGTCCCTGGCACAAACATT +
Preference number: 6 (lower is better)
Translates to: TSSPGISSIKTE*LTATIVPGTNI
Trigger: AATGTTTGTGCCAGGGACAATGGTGGCTGTAAGCAACTCTGTCTTTATCGAGGAAATTCCCGGAGAACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AAGCCTGAAGAGCATTCATCAATGTCTACACATGTTTaGCCGTCATCCTTCAGTTGGAATCCAGGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: KPEEHSSMSTHV*PSSFSWNPGQH
Trigger: ATGCTGGCCTGGATTCCAACTGAAGGATGACGGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp GACCATTGGAACACCGGAACTGATCTTTGGAACAACTaGTCTCACAATTTCTCTCATCAGAGCCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: DHWNTGTDLWNN*SHNFSHQSHLH
Trigger: GTGCAGATGGCTCTGATGAGAGAAATTGTGAGACAAGTTGTTCCAAAGATCAGTTCCGGTGTTCCAATGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp ACTTGTCAACCTCACATTTTGGTCCTTCATAGCGCGTaGGACAGACACATTCAACACTTCCATCATCCCCAA +
Preference number: 6 (lower is better)
Translates to: TCQPHILVLHSA*DRHIQHFHHPQ
Trigger: TTGGGGATGATGGAAGTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGACCAAAATGTGAGGTTGACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS CAA 90 bp GCCTTTCTCTGGGTGCACAGCTATAGATCTTGGTTGATCCAGGCCTaGGGAAATAATTACATAACGGAAAGAACCATTGAGTCTTGCAAC +
Preference number: 6 (lower is better)
Translates to: AFLWVHSYRSWLIQA*GNNYITERTIESCN
Trigger: GTTGCAAGACTCAATGGTTCTTTCCGTTATGTAATTATTTCCCAAGGCCTGGATCAACCAAGATCTATAGCTGTGCACCCAGAGAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp GTCCCTTTCTCTCTTACTCGGTTAAATATTTTAACCTCCTTCAGGTaGACTCCAAGGCCGGTTCTCATGGTTATCGTTTCTGTGGCATCA +
Preference number: 6 (lower is better)
Translates to: VPFSLTRLNILTSFR*TPRPVLMVIVSVAS
Trigger: TGATGCCACAGAAACGATAACCATGAGAACCGGCCTTGGAGTCAACCTGAAGGAGGTTAAAATATTTAACCGAGTAAGAGAGAAAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp GGAATATCGGAACGAAGAATTTTTGTATCTCCTCCTGTGTACTTGTaGGACCGCAGTATAGCTCTTCTTCCCCAGTCCGACCAGAATATA +
Preference number: 6 (lower is better)
Translates to: GISERRIFVSPPVYL*DRSIALLPQSDQNI
Trigger: TATATTCTGGTCGGACTGGGGAAGAAGAGCTATACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTCCGATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CAGCAAAGGGATGGGAAAGGTATTCATGACCTCGGATaGTTTCTATCATGTTTGTTCCATCATAGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: QQRDGKGIHDLG*FLSCLFHHRGL
Trigger: CAGCCCTCTATGATGGAACAAACATGATAGAAATCATCCGAGGTCATGAATACCTTTCCCATCCCTTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp CACATTTCCACCGAGCTTGGATACAGTGTCTGTTTTTaGAGCGAAACTCTCCAGCTTTACATATGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: HISTELGYSVCF*SETLQLYICEV
Trigger: TACCTCACATATGTAAAGCTGGAGAGTTTCGCTGCAAAAACAGACACTGTATCCAAGCTCGGTGGAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp AGCCATCTAGTTTGGCCACTTCGATTTGGTCCAGATTaGTGTCTATCCAGTATATGTTTCCTGCTATCCAGT +
Preference number: 6 (lower is better)
Translates to: SHLVWPLRFGPD*CLSSICFLLSS
Trigger: ACTGGATAGCAGGAAACATATACTGGATAGACAGCAATCTGGACCAAATCGAAGTGGCCAAACTAGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp AGTCGTCCTCTCCATCACACACCCAGAAATGTAGTTTaGAGAGAGAATTATTGCAAAGGAACTCATCAGCTC +
Preference number: 6 (lower is better)
Translates to: SRPLHHTPRNVV*RENYCKGTHQL
Trigger: GAGCTGATGAGTTCCTTTGCAATAATTCTCTCTGCAAACTACATTTCTGGGTGTGTGATGGAGAGGACGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp TTCACTCTCCCATTGGGAGTTAAAAGGCACAAGTCATaGCAGCCTCCATTCAATAATGCACATGGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: FTLPLGVKRHKS*QPPFNNAHGES
Trigger: ACTTTCTCCATGTGCATTATTGAATGGAGGCTGCCATGACTTGTGCCTTTTAACTCCCAATGGGAGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp GAATACAAGTCCCATCTGCACAGCGGAACTCAACCGTaGCACAGGTTGAAACTTTACAATCTAATTCATCAG +
Preference number: 6 (lower is better)
Translates to: EYKSHLHSGTQP*HRLKLYNLIHQ
Trigger: CTGATGAATTAGATTGTAAAGTTTCAACCTGTGCCACGGTTGAGTTCCGCTGTGCAGATGGGACTTGTATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp ATGCATCTCCCTGTACTCCAACAGGAAAACTTGGTTTaGTGGTCACACAATCGTATGGTACCATTGCAACCT +
Preference number: 6 (lower is better)
Translates to: MHLPVLQQENLV*WSHNRMVPLQP
Trigger: AGGTTGCAATGGTACCATACGATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAGTACAGGGAGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp CGATTCCCTCCAGTCTCAAGGTCGATTCTCTCTATCTaGTCTGTGCGAGCATCACACCAGTACAATTTATTT +
Preference number: 6 (lower is better)
Translates to: RFPPVSRSILSI*SVRASHQYNLF
Trigger: AAATAAATTGTACTGGTGTGATGCTCGCACAGACAAGATAGAGAGAATCGACCTTGAGACTGGAGGGAATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CCATTGGCTGATGTGGAATATCGGAACGAAGAATTTTaGTATCTCCTCCTGTGTACTTGTTGGACCGCAGTA +
Preference number: 6 (lower is better)
Translates to: PLADVEYRNEEF*YLLLCTCWTAV
Trigger: TACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTCCGATATTCCACATCAGCCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AGGCCAGCATTTGCACTTATAACTGACCGGAAGGTCTaGACAGTCTTGAGAACATCCACTGACTTTCTTACT +
Preference number: 6 (lower is better)
Translates to: RPAFALITDRKV*TVLRTSTDFLT
Trigger: AGTAAGAAAGTCAGTGGATGTTCTCAAGACTGTCAAGACCTTCCGGTCAGTTATAAGTGCAAATGCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CAGTCGTCCTCTCCATCACACACCCAGAAATGTAGTTaGCAGAGAGAATTATTGCAAAGGAACTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: QSSSPSHTQKCS*QRELLQRNSSA
Trigger: AGCTGATGAGTTCCTTTGCAATAATTCTCTCTGCAAACTACATTTCTGGGTGTGTGATGGAGAGGACGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp CTGGTTTCCAGCAGTCACAATGCAGGTTCCTCCATTTaGACAAAAATCCTCACAGACTGTCTTACCACAGTT +
Preference number: 6 (lower is better)
Translates to: LVSSSHNAGSSI*TKILTDCLTTV
Trigger: AACTGTGGTAAGACAGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGCATTGTGACTGCTGGAAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS TCA 72 bp CCTGCTATTGGATCTACTGCTATTGCTTTAGGATTGTaGAGCTCCAGATCAATCAGGGTGACACATACAGAA +
Preference number: 6 (lower is better)
Translates to: PAIGSTAIALGL*SSRSIRVTHTE
Trigger: TTCTGTATGTGTCACCCTGATTGATCTGGAGCTTCACAATCCTAAAGCAATAGCAGTAGATCCAATAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CCATTTGGAGTGAGTATGTCTGTACTGACCACCACTTaGGCATTTTTCCCAGTCAGAGTAGATCTCATGATA +
Preference number: 6 (lower is better)
Translates to: PFGVSMSVLTTT*AFFPVRVDLMI
Trigger: TATCATGAGATCTACTCTGACTGGGAAAAATGCTCAAGTGGTGGTCAGTACAGACATACTCACTCCAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp AAAGTTCACAGCTATTGGTGTCATTGGCAACAGCTATaGTTCCCATTGGCTGATGTGGAATATCGGAACGAA +
Preference number: 6 (lower is better)
Translates to: KVHSYWCHWQQL*FPLADVEYRNE
Trigger: TTCGTTCCGATATTCCACATCAGCCAATGGGAATCATAGCTGTTGCCAATGACACCAATAGCTGTGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp GTATGTATTGATGCATTGCTGGCTACAGGGAAAGCCTaGAGAGCATTCATCAATGTCTACACATGTTTTGCC +
Preference number: 6 (lower is better)
Translates to: VCIDALLATGKA*RAFINVYTCFA
Trigger: GGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCTTTCCCTGTAGCCAGCAATGCATCAATACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp TCGGGAATACAGTTGTTGTTTTTACACTGGAATTCATaGGGTCCACAAGTCTTTTTATCGCAGTTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SGIQLLFLHWNS*GPQVFLSQLAS
Trigger: CGAGGCCAACTGCGATAAAAAGACTTGTGGACCTCATGAATTCCAGTGTAAAAACAACAACTGTATTCCCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp TCCGACTGTAGGCATATTCTGTTATTTCTGCATCTGTaGGGTCTCGTGGATGGACAAAGAAATTTGACACAC +
Preference number: 6 (lower is better)
Translates to: SDCRHILLFLHL*GLVDGQRNLTH
Trigger: GTGTGTCAAATTTCTTTGTCCATCCACGAGACCTCACAGATGCAGAAATAACAGAATATGCCTACAGTCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp TGGTTTCCAGCAGTCACAATGCAGGTTCCTCCATTTTaGCAAAAATCCTCACAGACTGTCTTACCACAGTTT +
Preference number: 6 (lower is better)
Translates to: WFPAVTMQVPPF*QKSSQTVLPQF
Trigger: AAACTGTGGTAAGACAGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGCATTGTGACTGCTGGAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS GCA 72 bp AAGTGTAGGATCCATGTGTGTTTCTGCAGGTCTGGCTaGATGTACCATAAACAGCACATTCATCTTGATCTT +
Preference number: 6 (lower is better)
Translates to: KCRIHVCFCRSG*MYHKQHIHLDL
Trigger: AAGATCAAGATGAATGTGCTGTTTATGGTACATGCAGCCAGACCTGCAGAAACACACATGGATCCTACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp ACCAGTACAATTTATTTTCCTCATAGTCGATGGAGATaGCATTCGGCCATGCTATTCCCATGCTTACAAGGA +
Preference number: 6 (lower is better)
Translates to: TSTIYFPHSRWR*HSAMLFPCLQG
Trigger: TCCTTGTAAGCATGGGAATAGCATGGCCGAATGGCATCTCCATCGACTATGAGGAAAATAAATTGTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp CATCTCCCTGTACTCCAACAGGAAAACTTGGTTTTGTaGTCACACAATCGTATGGTACCATTGCAACCTTTT +
Preference number: 6 (lower is better)
Translates to: HLPVLQQENLVL*SHNRMVPLQPF
Trigger: AAAAGGTTGCAATGGTACCATACGATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAGTACAGGGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp TTGTTGATGCATCTCCCTGTACTCCAACAGGAAAACTaGGTTTTGTGGTCACACAATCGTATGGTACCATTG +
Preference number: 6 (lower is better)
Translates to: LLMHLPVLQQEN*VLWSHNRMVPL
Trigger: CAATGGTACCATACGATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAGTACAGGGAGATGCATCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp TGGGTGCACAGCTATAGATCTTGGTTGATCCAGGCCTaGGGAAATAATTACATAACGGAAAGAACCATTGAG +
Preference number: 6 (lower is better)
Translates to: WVHSYRSWLIQA*GNNYITERTIE
Trigger: CTCAATGGTTCTTTCCGTTATGTAATTATTTCCCAAGGCCTGGATCAACCAAGATCTATAGCTGTGCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TCCATTTGGAGTGAGTATGTCTGTACTGACCACCACTaGAGCATTTTTCCCAGTCAGAGTAGATCTCATGAT +
Preference number: 6 (lower is better)
Translates to: SIWSEYVCTDHH*SIFPSQSRSHD
Trigger: ATCATGAGATCTACTCTGACTGGGAAAAATGCTCAAGTGGTGGTCAGTACAGACATACTCACTCCAAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp GGATCTAAAGACAAGTCTCTGGGAAACTTCAGCCTTTaGCTAACGAGTATAGTAGGGTACAAGCCATTGAGT +
Preference number: 6 (lower is better)
Translates to: GSKDKSLGNFSL*LTSIVGYKPLS
Trigger: ACTCAATGGCTTGTACCCTACTATACTCGTTAGCAAAAGGCTGAAGTTTCCCAGAGACTTGTCTTTAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AGGAAACAAAACCCAGCATATGTAGACTACACCATATaGCATCAGTCTGGCACCATGACTGGTAGATGCAAA +
Preference number: 6 (lower is better)
Translates to: RKQNPAYVDYTI*HQSGTMTGRCK
Trigger: TTTGCATCTACCAGTCATGGTGCCAGACTGATGCAATATGGTGTAGTCTACATATGCTGGGTTTTGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486364.1
CDS CAA 90 bp GCTTTGTTGATGCATCTCCCTGTACTCCAACAGGAAAACTTGGTTTaGTGGTCACACAATCGTATGGTACCATTGCAACCTTTTTCATCA +
Preference number: 6 (lower is better)
Translates to: ALLMHLPVLQQENLV*WSHNRMVPLQPFSS
Trigger: TGATGAAAAAGGTTGCAATGGTACCATACGATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAGTACAGGGAGATGCATCAACAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 90 bp GATAGTAAGTCCATTTGGAGTGAGTATGTCTGTACTGACCACCACTaGAGCATTTTTCCCAGTCAGAGTAGATCTCATGATACTTGGATG +
Preference number: 6 (lower is better)
Translates to: DSKSIWSEYVCTDHH*SIFPSQSRSHDTWM
Trigger: CATCCAAGTATCATGAGATCTACTCTGACTGGGAAAAATGCTCAAGTGGTGGTCAGTACAGACATACTCACTCCAAATGGACTTACTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CTGTTTTTGCAGCGAAACTCTCCAGCTTTACATATGTaGGGTAGTGCTTCTCCAGGATTAAATGTGCAAGTT +
Preference number: 6 (lower is better)
Translates to: LFLQRNSPALHM*GSASPGLNVQV
Trigger: AACTTGCACATTTAATCCTGGAGAAGCACTACCTCACATATGTAAAGCTGGAGAGTTTCGCTGCAAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CAGTGGAATTCATCACGTCCATCCTCACAATCTTTCTaGCCATCGCATATCCAGGTATTCAAAATGCATCTT +
Preference number: 6 (lower is better)
Translates to: QWNSSRPSSQSF*PSHIQVFKMHL
Trigger: AAGATGCATTTTGAATACCTGGATATGCGATGGTCAGAAAGATTGTGAGGATGGACGTGATGAATTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CAGGTTGTCTATAAGAATGATACACCTGGATATCTGTaGTGGCATGCCATGAGTAAATCAGTGAGAGTCTGT +
Preference number: 6 (lower is better)
Translates to: QVVYKNDTPGYL*WHAMSKSVRVC
Trigger: ACAGACTCTCACTGATTTACTCATGGCATGCCATCACAGATATCCAGGTGTATCATTCTTATAGACAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp ATCCATCGTATTCACACCTTTCAATTTTTCCTAGACTaGCATCTGAGAAATACAGCTTCTCTGCACGGTAGT +
Preference number: 6 (lower is better)
Translates to: IHRIHTFQFFLD*HLRNTASLHGS
Trigger: ACTACCGTGCAGAGAAGCTGTATTTCTCAGATGGCAGTCTAGGAAAAATTGAAAGGTGTGAATACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp GAATTGTCACCGCATTCATCAATCCCATTGCACATTTaGTCCGACTGTAGGCATATTCTGTTATTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: ELSPHSSIPLHI*SDCRHILLFLH
Trigger: ATGCAGAAATAACAGAATATGCCTACAGTCGGAGCAAATGTGCAATGGGATTGATGAATGCGGTGACAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp TATGATCGTAATAGGCATCACACCAGTATAATGTGTTaGTGTGAAAGTCCAGAGTTAAACCGTTTGGCCACA +
Preference number: 6 (lower is better)
Translates to: YDRNRHHTSIMC*CESPELNRLAT
Trigger: TGTGGCCAAACGGTTTAACTCTGGACTTTCACACCAACACATTATACTGGTGTGATGCCTATTACGATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp AATGCAATGCTTCGTAGTCTTACACTGGAAATAGTCTaGAGAACAGCTGTTTTCAGGACAGTCTCTTTCATC +
Preference number: 6 (lower is better)
Translates to: NAMLRSLTLEIV*RTAVFRTVSFI
Trigger: GATGAAAGAGACTGTCCTGAAAACAGCTGTTCTCCAGACTATTTCCAGTGTAAGACTACGAAGCATTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp TATTCTGTTATTTCTGCATCTGTGAGGTCTCGTGGATaGACAAAGAAATTTGACACACATATCAGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: YSVISASVRSRG*TKKFDTHIRGF
Trigger: GAAGCCCCTGATATGTGTGTCAAATTTCTTTGTCCATCCACGAGACCTCACAGATGCAGAAATAACAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp ATAATGTGTTGGTGTGAAAGTCCAGAGTTAAACCGTTaGGCCACAGCATCTTTGAAGTCACAAAAATCTGCC +
Preference number: 6 (lower is better)
Translates to: IMCWCESPELNR*ATASLKSQKSA
Trigger: GGCAGATTTTTGTGACTTCAAAGATGCTGTGGCCAAACGGTTTAACTCTGGACTTTCACACCAACACATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp GGGGTGGTCTTTCATGCCTCAGCAATGTCACCTCACTaGTTATCAAATCTAGTTGAAAAATGGAACCATTCA +
Preference number: 6 (lower is better)
Translates to: GVVFHASAMSPH*LSNLVEKWNHS
Trigger: TGAATGGTTCCATTTTTCAACTAGATTTGATAACAAGTGAGGTGACATTGCTGAGGCATGAAAGACCACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TTTTCATCTGAAGCATCTGCACAATCTATGTTCTGGTaGCATCGTGCTGATCTTGGAATACAAGTCCCATCT +
Preference number: 6 (lower is better)
Translates to: FSSEASAQSMFW*HRADLGIQVPS
Trigger: AGATGGGACTTGTATTCCAAGATCAGCACGATGCAACCAGAACATAGATTGTGCAGATGCTTCAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp ATGAACTGTTGCATGACTGTTCTGCACTTTTACACTTaGGGTTTAAAGGTGCTTCATCAGAATGGTCAGGAC +
Preference number: 6 (lower is better)
Translates to: MNCCMTVLHFYT*GLKVLHQNGQD
Trigger: GTCCTGACCATTCTGATGAAGCACCTTTAAACCCAAAGTGTAAAAGTGCAGAACAGTCATGCAACAGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp CACTTCCTAAGGAGTTTCGACAGTTTTGCCCATCCATATATAATTTaGCATATACCGGATTGGAGTAATTTGTTGGCCCAGCAGTTAGTG +
Preference number: 6 (lower is better)
Translates to: HFLRSFDSFAHPYII*HIPDWSNLLAQQLV
Trigger: CACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAAACTCCTTAGGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp GCCCAAATAGGGGTGGTCTTTCATGCCTCAGCAATGTCACCTCACTaGTTATCAAATCTAGTTGAAAAATGGAACCATTCATATAATCAG +
Preference number: 6 (lower is better)
Translates to: AQIGVVFHASAMSPH*LSNLVEKWNHSYNQ
Trigger: CTGATTATATGAATGGTTCCATTTTTCAACTAGATTTGATAACAAGTGAGGTGACATTGCTGAGGCATGAAAGACCACCCCTATTTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp AGGCCAGCATTTGCACTTATAACTGACCGGAAGGTCTTGACAGTCTaGAGAACATCCACTGACTTTCTTACTCAAACATTCATTTATATG +
Preference number: 6 (lower is better)
Translates to: RPAFALITDRKVLTV*RTSTDFLTQTFIYM
Trigger: CATATAAATGAATGTTTGAGTAAGAAAGTCAGTGGATGTTCTCAAGACTGTCAAGACCTTCCGGTCAGTTATAAGTGCAAATGCTGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp GCCCATCCATATATAATTTTGCATATACCGGATTGGAGTAATTTGTaGGCCCAGCAGTTAGTGGTCCTTTCAAATCAGAGTTTAGGTAGA +
Preference number: 6 (lower is better)
Translates to: AHPYIILHIPDWSNL*AQQLVVLSNQSLGR
Trigger: TCTACCTAAACTCTGATTTGAAAGGACCACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp AACTGTATAGCAGATATATTTCAGCTACGCTACTACAACAAAGATTaGGCAAATTATATAGCCTGCTGGCCAAATCTGACCTGTGGCCTA +
Preference number: 6 (lower is better)
Translates to: NCIADIFQLRYYNKD*ANYIACWPNLTCGL
Trigger: TAGGCCACAGGTCAGATTTGGCCAGCAGGCTATATAATTTGCCAAATCTTTGTTGTAGTAGCGTAGCTGAAATATATCTGCTATACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486364.1
CDS TCA 72 bp CAAGTCCTTGTAGTTTCAGATGTTGGTAAACAAAGTTaGGAGCATCCACCATTGTTTAGTTGGCAGGAATTG +
Preference number: 6 (lower is better)
Translates to: QVLVVSDVGKQS*EHPPLFSWQEL
Trigger: CAATTCCTGCCAACTAAACAATGGTGGATGCTCTCAACTTTGTTTACCAACATCTGAAACTACAAGGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp ATTGGAATACAGTGGGCTTTATTTTTGCACCGAAACTaGTCTTCCTTACATTCAGTCACACAGTCCATCTCA +
Preference number: 6 (lower is better)
Translates to: IGIQWALFLHRN*SSLHSVTQSIS
Trigger: TGAGATGGACTGTGTGACTGAATGTAAGGAAGATCAGTTTCGGTGCAAAAATAAAGCCCACTGTATTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp CAAAATATATCTTCACTGTCTTTATTTATAATGCAGTaGCCCCCATGGCACCTTACACACTTGTCAACCTCA +
Preference number: 6 (lower is better)
Translates to: QNISSLSLFIMQ*PPWHLTHLSTS
Trigger: TGAGGTTGACAAGTGTGTAAGGTGCCATGGGGGGCACTGCATTATAAATAAAGACAGTGAAGATATATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389484.8
ENST00000437977.5
ENST00000442974.1
CDS CCA 72 bp TATCTTGGTATTCAAGTCCATTCCTCTAACAATTCCTaGGCGTCCTTTCCCATAAAAGAGGAACAACTCATT +
Preference number: 6 (lower is better)
Translates to: YLGIQVHSSNNS*ASFPIKEEQLI
Trigger: AATGAGTTGTTCCTCTTTTATGGGAAAGGACGCCCAGGAATTGTTAGAGGAATGGACTTGAATACCAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp TTTGCCCATCCATATATAATTTTGCATATACCGGATTaGAGTAATTTGTTGGCCCAGCAGTTAGTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: FAHPYIILHIPD*SNLLAQQLVVL
Trigger: AAGGACCACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AACTTGGTTTTGTGGTCACACAATCGTATGGTACCATaGCAACCTTTTTCATCACTACCATCTTCACAGTCT +
Preference number: 6 (lower is better)
Translates to: NLVLWSHNRMVP*QPFSSLPSSQS
Trigger: AGACTGTGAAGATGGTAGTGATGAAAAAGGTTGCAATGGTACCATACGATTGTGTGACCACAAAACCAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp GGGACTGTAAATGCCGTGATGAAGTTAAAGTATGGATaGTCAATATCCACTCCTCTGATTTCAGAACGTCTT +
Preference number: 6 (lower is better)
Translates to: GTVNAVMKLKYG*SISTPLISERL
Trigger: AAGACGTTCTGAAATCAGAGGAGTGGATATTGACAATCCATACTTTAACTTCATCACGGCATTTACAGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS CAA 72 bp AATGAAGTTCCTGATATAGGCATCAAAGCATCCATTTaGTCACTTGGTTCAAGAGGTATTCCCCTGATTCCT +
Preference number: 6 (lower is better)
Translates to: NEVPDIGIKASI*SLGSRGIPLIP
Trigger: AGGAATCAGGGGAATACCTCTTGAACCAAGTGACAAAATGGATGCTTTGATGCCTATATCAGGAACTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TTTGCACTTATAACTGACCGGAAGGTCTTGACAGTCTaGAGAACATCCACTGACTTTCTTACTCAAACATTC +
Preference number: 6 (lower is better)
Translates to: FALITDRKVLTV*RTSTDFLTQTF
Trigger: GAATGTTTGAGTAAGAAAGTCAGTGGATGTTCTCAAGACTGTCAAGACCTTCCGGTCAGTTATAAGTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AAAAAGGTTCTTCATCTGAGAGCGATTTGCAGCCATTaGGGTTATCAGGTTGTATTTCATACCCATCTGTAC +
Preference number: 6 (lower is better)
Translates to: KKVLHLRAICSH*GYQVVFHTHLY
Trigger: GTACAGATGGGTATGAAATACAACCTGATAACCCAAATGGCTGCAAATCGCTCTCAGATGAAGAACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AGGAGTTTCGACAGTTTTGCCCATCCATATATAATTTaGCATATACCGGATTGGAGTAATTTGTTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: RSFDSFAHPYII*HIPDWSNLLAQ
Trigger: CTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAAACTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp GCAGATATATTTCAGCTACGCTACTACAACAAAGATTaGGCAAATTATATAGCCTGCTGGCCAAATCTGACC +
Preference number: 6 (lower is better)
Translates to: ADIFQLRYYNKD*ANYIACWPNLT
Trigger: GGTCAGATTTGGCCAGCAGGCTATATAATTTGCCAAATCTTTGTTGTAGTAGCGTAGCTGAAATATATCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486364.1
CDS CAA 90 bp ACAAATCCAATGCTTAGAAATACATTTTTGTGCGGAACAAGCAAATaGGTTCCAAGAGCAAGAAGAATCACAGTGGAATTCATCACGTCC +
Preference number: 6 (lower is better)
Translates to: TNPMLRNTFLCGTSK*VPRARRITVEFITS
Trigger: GGACGTGATGAATTCCACTGTGATTCTTCTTGCTCTTGGAACCAATTTGCTTGTTCCGCACAAAAATGTATTTCTAAGCATTGGATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp TTTGCCCATCCATATATAATTTTGCATATACCGGATTGGAGTAATTaGTTGGCCCAGCAGTTAGTGGTCCTTTCAAATCAGAGTTTAGGT +
Preference number: 6 (lower is better)
Translates to: FAHPYIILHIPDWSN*LAQQLVVLSNQSLG
Trigger: ACCTAAACTCTGATTTGAAAGGACCACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 90 bp CACTTCCTAAGGAGTTTCGACAGTTTTGCCCATCCATATATAATTTaGCATATACCGGATTGGAGTAATTTGTTGGCTTTGTTGGGTCTA +
Preference number: 6 (lower is better)
Translates to: HFLRSFDSFAHPYII*HIPDWSNLLALLGL
Trigger: TAGACCCAACAAAGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAAACTCCTTAGGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS TCA 72 bp CCCAAGCCATTGGTAATGATATCTTCTTTCCAAGTCTaGTCTCTTTTAGCTCTGCTAATTTTATTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: PKPLVMISSFQV*SLLALLILLKP
Trigger: GGGCTTCAATAAAATTAGCAGAGCTAAAAGAGATCAGACTTGGAAAGAAGATATCATTACCAATGGCTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp AAAGGCACAAATGACTGCAACCACCATTATTTATCATaGAGAGATGTTTGGAGACATCAGGTTGTCTATAAG +
Preference number: 6 (lower is better)
Translates to: KGTNDCNHHYLS*RDVWRHQVVYK
Trigger: CTTATAGACAACCTGATGTCTCCAAACATCTCTGCATGATAAATAATGGTGGTTGCAGTCATTTGTGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS GCA 72 bp ATTACTACAAGCAAACTCATCCTTTTTACAAGGCCTTaGTTTATATGTCAGCTTACCACCACAGTGATCTTC +
Preference number: 6 (lower is better)
Translates to: ITTSKLILFTRP*FICQLTTTVIF
Trigger: GAAGATCACTGTGGTGGTAAGCTGACATATAAAGCAAGGCCTTGTAAAAAGGATGAGTTTGCTTGTAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AGATTTTCTATGGGGATCATGTATTCATCAGCTATCTaGGTATTCAAGTCCATTCCTCTAACAATTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RFSMGIMYSSAI*VFKSIPLTIPG
Trigger: CCCAGGAATTGTTAGAGGAATGGACTTGAATACCAAGATAGCTGATGAATACATGATCCCCATAGAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp ATTGACTCGATTACTTCTAAATTACCACCATCCAGGTaGCATCTATTTATGGTTCCATTCCCTGAACTGATC +
Preference number: 6 (lower is better)
Translates to: IDSITSKLPPSR*HLFMVPFPELI
Trigger: GATCAGTTCAGGGAATGGAACCATAAATAGATGCAACCTGGATGGTGGTAATTTAGAAGTAATCGAGTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CCATTTGTTGCACATTGTGGAAGGATTGAAGAATATTaGTTGTCCATTCATCTGTTAATCCTCCTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: PFVAHCGRIEEY*LSIHLLILLLL
Trigger: CAAAAGCAGGAGGATTAACAGATGAATGGACAATCAATATTCTTCAATCCTTCCACAATGTGCAACAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS TCA 72 bp CCATTGAGTCTTGCAACTTCAATTAAGTTGAAACCATaGTCTGTCCAATATATGTTACCAGCAATCCAGTCA +
Preference number: 6 (lower is better)
Translates to: PLSLATSIKLKP*SVQYMLPAIQS
Trigger: TGACTGGATTGCTGGTAACATATATTGGACAGATCATGGTTTCAACTTAATTGAAGTTGCAAGACTCAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp TTCTCTGCCATGGATCCTTTTGTAGAAAATTCCGCCTaGATTAAACTGAGTACTCCAAATAATCATATCTCT +
Preference number: 6 (lower is better)
Translates to: FSAMDPFVENSA*IKLSTPNNHIS
Trigger: AGAGATATGATTATTTGGAGTACTCAGTTTAATCCAGGCGGAATTTTCTACAAAAGGATCCATGGCAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CAA 72 bp TTCTCCATCACAAATCCAATGCTTAGAAATACATTTTaGTGCGGAACAAGCAAATTGGTTCCAAGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: FSITNPMLRNTF*CGTSKLVPRAR
Trigger: TCTTGCTCTTGGAACCAATTTGCTTGTTCCGCACAAAAATGTATTTCTAAGCATTGGATTTGTGATGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TCACACACCCAGAAATGTAGTTTGCAGAGAGAATTATaGCAAAGGAACTCATCAGCTCTACATATATTTCCT +
Preference number: 6 (lower is better)
Translates to: SHTQKCSLQREL*QRNSSALHIFP
Trigger: AGGAAATATATGTAGAGCTGATGAGTTCCTTTGCAATAATTCTCTCTGCAAACTACATTTCTGGGTGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TATTACTACAAGCAAACTCATCCTTTTTACAAGGCCTaGCTTTATATGTCAGCTTACCACCACAGTGATCTT +
Preference number: 6 (lower is better)
Translates to: YYYKQTHPFYKA*LYMSAYHHSDL
Trigger: AAGATCACTGTGGTGGTAAGCTGACATATAAAGCAAGGCCTTGTAAAAAGGATGAGTTTGCTTGTAGTAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp TATATAATTTTGCATATACCGGATTGGAGTAATTTGTaGGCCCAGCAGTTAGTGGTCCTTTCAAATCAGAGT +
Preference number: 6 (lower is better)
Translates to: YIILHIPDWSNL*AQQLVVLSNQS
Trigger: ACTCTGATTTGAAAGGACCACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CAA 72 bp AGGAGTTTCGACAGTTTTGCCCATCCATATATAATTTaGCATATACCGGATTGGAGTAATTTGTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: RSFDSFAHPYII*HIPDWSNLLAL
Trigger: CAAAGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAAACTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437977.5
CDS GCA 72 bp TGTGCTGCTCACATACTTGGCTGCACTTTAGATGATTaGTACAATAATCCACAATTTCACATGTTTTATTGT +
Preference number: 6 (lower is better)
Translates to: CAAHILGCTLDD*YNNPQFHMFYC
Trigger: ACAATAAAACATGTGAAATTGTGGATTATTGTAGCAATCATCTAAAGTGCAGCCAAGTATGTGAGCAGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp TATCACAGTAACGTCATCAATATCAGGGACTGTAAATaGCGTGATGAAGTTAAAGTATGGATTGTCAATATC +
Preference number: 6 (lower is better)
Translates to: YHSNVINIRDCK*RDEVKVWIVNI
Trigger: GATATTGACAATCCATACTTTAACTTCATCACGGCATTTACAGTCCCTGATATTGATGACGTTACTGTGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000434794.1
CDS GCA 72 bp CCAGTTGTCTTTAATAAGCTGTATATTTCCAAAGTGTaGATCACTGTAAAAGATTCGGTTGGTACCTTTTCT +
Preference number: 6 (lower is better)
Translates to: PVVFNKLYISKV*ITVKDSVGTFS
Trigger: AGAAAAGGTACCAACCGAATCTTTTACAGTGATGCACACTTTGGAAATATACAGCTTATTAAAGACAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389484.8
CDS CCA 72 bp ATGAGAAATTTGTTGATGATCGCCACTGTAGTTGAATaGATATATAAAACCCAGGATATCAGTGTCATTAGC +
Preference number: 6 (lower is better)
Translates to: MRNLLMIATVVE*IYKTQDISVIS
Trigger: GCTAATGACACTGATATCCTGGGTTTTATATATCCATTCAACTACAGTGGCGATCATCAACAAATTTCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5
CDS CAA 72 bp GTTAACTTACATGAATCATCTAACAGGCTGTCATCATaGCAGGTGCCATTAATCAAATATTTTCCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: VNLHESSNRLSS*QVPLIKYFPSG
Trigger: TCCAGAAGGAAAATATTTGATTAATGGCACCTGCAATGATGACAGCCTGTTAGATGATTCATGTAAGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389484.8
ENST00000437977.5