RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRP12 (Homo sapiens)

Ensembl gene IDs: ENSG00000147650

Ensembl transcript IDs: ENST00000276654.10, ENST00000424843.6, ENST00000518375.1, ENST00000519675.1, ENST00000520770.1, ENST00000522046.1, ENST00000523007.1

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACAGTTTGTTTCCCACTaGCAAGTTCATATGATAATG +
Preference number: 2 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTQFVSH*QVHMIM
Trigger: CATTATCATATGAACTTGTCAGTGGGAAACAAACTG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
3UTR-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGGATATTGCTCCAACTaGTATACAATCTCCCTTATG +
Preference number: 3 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIGYCSN*YTISLM
Trigger: CATAAGGGAGATTGTATACAAGTTGGAGCAATATCC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
3UTR-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGGATATTGCTCCAACTaGTATACAATCTCCCTTATG +
Preference number: 3 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKGYCSN*YTISLM
Trigger: CATAAGGGAGATTGTATACAAGTTGGAGCAATATCC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGCGGGGCGGCCCTCCTaGGGGCAAGGGCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIAGRPS*GQGQGA
Trigger: AGCTCCTTGCCCTTGCCCCCAGGAGGGCCGCCCCGC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACGCGAGACGAGAGGGTaGCGGACGCCGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTRETRG*RTPDSG
Trigger: GCCGGAGTCCGGCGTCCGCCACCCTCTCGTCTCGCG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGCGCTCTCCGCGGCTaGGGGAGGGGGAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCALRG*GRGKGG
Trigger: CCCTCCCTTCCCCCTCCCGCAGCCGCGGAGAGCGCA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACCCAGCGTAGCCCCTaGGTCATACGACTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITQRSP*VIRLSA
Trigger: TGCACTCAGTCGTATGACTCAGGGGCTACGCTGGGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTAAGCTGGTGACGTGCTaGACTCACACTTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIKLVTC*THTWGF
Trigger: GAACCCCCAAGTGTGAGTCCAGCACGTCACCAGCTT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTCGGGTACTCTGAGTTaGGGAACTTGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISGTLS*GTCTCS
Trigger: GGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCCACCTCGGGTACTCTaGGTTGAGGAACTTGCACAT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIPPRVL*VEELAH
Trigger: ATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGCACTTGTAAGCTGGTaGCGTGCTGGACTCACACTT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIALVSW*RAGLTL
Trigger: AAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGGTATCTGGGCAGTGTaGACAATACCACAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIGIWAV*TIPQRS
Trigger: TGAGCGCTGTGGTATTGTCCACACTGCCCAGATACC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGCCAGCCTGGGCTTGTaGTTATGCCACTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTASLGL*LCHLVL
Trigger: GAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTGCAACCCCACCAGATaGTCCTGCCATATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDICNPTR*SCHISS
Trigger: AGAAGAGATATGGCAGGAGCATCTGGTGGGGTTGCA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCATAACCACAGCAGATaGAGAGAGAGAGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIHNHSR*RERGGD
Trigger: GTCTCCTCCTCTCTCTCTCCATCTGCTGTGGTTATG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCTTCTACTGCCGTTGTaGGAGGGACTTTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDILLLPL*EGLFEA
Trigger: TGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCTTCCATTTGGGCAATaGCAATACCCATCACAACGC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDILPFGQ*QYPSQR
Trigger: GCGTTGTGATGGGTATTGGCATTGCCCAAATGGAAG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGTAAGCTGGTGACGTaGTGGACTCACACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTCKLVT*WTHTWG
Trigger: CCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTGCTCGTATTTGCTCTaGAGTCTCTCCACAAGCAGT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDICSYLL*SLSTSS
Trigger: ACTGCTTGTGGAGAGACTCCAGAGCAAATACGAGCA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCAAGTGTCTGGTATCTaGGCAGTGTGGACAATACCA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIQVSGI*AVWTIP
Trigger: TGGTATTGTCCACACTGCCCAGATACCAGACACTTG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGCCAGCCTGGGCTTGTaGTTATGCCACTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKASLGL*LCHLVL
Trigger: GAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTCACCACAGTCATCTTaGGAATCACACACCCAACTT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISPQSS*ESHTQL
Trigger: AAGTTGGGTGTGTGATTCTCAAGATGACTGTGGTGA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATCGGGTACTCTGAGTTaGGGAACTTGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSGTLS*GTCTCS
Trigger: GGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACCACCTCGGGTACTCTaGGTTGAGGAACTTGCACAT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTPPRVL*VEELAH
Trigger: ATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGCACTTGTAAGCTGGTaGCGTGCTGGACTCACACTT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTALVSW*RAGLTL
Trigger: AAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTAAAGGACTCTGGTTCTaGCTTAGGGAACTTGATCGT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIKGLWF*LRELDR
Trigger: ACGATCAAGTTCCCTAAGTCAGAACCAGAGTCCTTT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGAGGATTTGCTTCTTTaGCACAGATCTCTTCATCGG +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIEDLLL*HRSLHR
Trigger: CCGATGAAGAGATCTGTGCCAAAGAAGCAAATCCTC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACAGGGTATTTCCCATaGCAAACAGAACCCATCTAC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITGYFP*QTEPIY
Trigger: GTAGATGGGTTCTGTTTGCCATGGGAAATACCCTGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCTTCCTTCTGGCACATaGTACAATTGGTTTCATCCC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDILPSGT*YNWFHP
Trigger: GGGATGAAACCAATTGTACCATGTGCCAGAAGGAAG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGCTGGACTCACACTTaGGGGTTCCACACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTCWTHT*GFHTCH
Trigger: GTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGCCATCTCGATTACTTaGCCTTACTCCAGGATTTGT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIAISIT*PYSRIC
Trigger: ACAAATCCTGGAGTAAGGCCAAGTAATCGAGATGGC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACCAGATGTGGTCTTGTaGAGAGATATACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTPDVVL*RDIRRW
Trigger: CCACCTCCGTATATCTCTTCACAAGACCACATCTGG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTATGTTGTCATCCGAATaGAACCTAATCCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIMLSSE*NLIQMW
Trigger: CCACATCTGGATTAGGTTTCATTCGGATGACAACAT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGAAGTAAATCCAAGCTaGGATCGTACCGCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTEVNPS*DRTASL
Trigger: GAGGCTAGCGGTACGATCTCAGCTTGGATTTACTTC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGCCAATGACCCAGAATaGCGTGATCTTGCAAAATTA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIANDPE*RDLAKL
Trigger: TAATTTTGCAAGATCACGTCATTCTGGGTCATTGGC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACCCTTGTCCTTGATCTaGGGCAAGATCAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTPLSLI*GKIKKR
Trigger: CCTCTTCTTGATCTTGCCTCAGATCAAGGACAAGGG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTGTCTATTAACCAGGTaGAATTGCTTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDICLLTR*NCFQED
Trigger: ATCCTCCTGGAAGCAATTGCACCTGGTTAATAGACA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATACTGTCGCTTCTACTaGCGTTGTGGGAGGGACTTT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTYCRFY*RCGRDF
Trigger: AAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGTAAGCTGGTGACGTaGTGGACTCACACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCKLVT*WTHTWG
Trigger: CCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTAGTAATGATTTCGCCTaGGTTTGCCCTTATGAACCA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISNDFA*VCPYEP
Trigger: TGGTTCATAAGGGCAAACCCAGGCGAAATCATTACT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGGCACATGGTACAATTaGTTTCATCCCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIGTWYN*FHPFHL
Trigger: CAAATGGAAGGGATGAAACCAATTGTACCATGTGCC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTGTAGGCACGATTACTaGGCAATTTTCTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDICRHDY*AIFFIA
Trigger: AGCGATGAAGAAAATTGCCCAGTAATCGTGCCTACA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGATCAAGAAGAGGTCTaGAGCAGTCATTCACATCAA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIDQEEV*SSHSHQ
Trigger: TTGATGTGAATGACTGCTCCAGACCTCTTCTTGATC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATACATCCCAATGCTATaGCGAGTAACAGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTYIPML*RVTGHR
Trigger: TCTGTGGCCTGTTACTCGTCATAGCATTGGGATGTA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACTAAGCCCTTGTCCTTaGTCTGAGGCAAGATCAAGA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTLSPCP*SEARSR
Trigger: TCTTGATCTTGCCTCAGATCAAGGACAAGGGCTTAG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACTTGGTGCTCGTATTTaGTCTGGAGTCTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTLGARI*SGVSPQ
Trigger: TTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGATTTCGCCTGGGTTTaGCCTTATGAACCAGCTACA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTDFAWV*PYEPAT
Trigger: TGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAATC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTTAACCAGGTGCAATTaGTTCCAGGAGGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDILTRCN*FQEDKS
Trigger: ACTTTTATCCTCCTGGAAGCAATTGCACCTGGTTAA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAATCCCTTCCATTATCTaGATGACCACCTCGGGTACT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTIPSII*MTTSGT
Trigger: AGTACCCGAGGTGGTCATGCAGATAATGGAAGGGAT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAGTCATACGACTGAGTaGACTTGTAAGCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSHTTE*TCKLVT
Trigger: CGTCACCAGCTTACAAGTGCACTCAGTCGTATGACT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAATCCCTAGGGTCCAATaGAAGCGCAACCCTGTATTA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTIPRVQ*KRNPVL
Trigger: TAATACAGGGTTGCGCTTGCATTGGACCCTAGGGAT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACATTTCCAGGCTTCTaGTATACACTTTCCATTACC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITFPGF*YTLSIT
Trigger: GGTAATGGAAAGTGTATACCAGAAGCCTGGAAATGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACCATTGCCCACATGTTaGCACATCACAGTCTATCTC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTPLPTC*HITVYL
Trigger: GAGATAGACTGTGATGTGCCAACATGTGGGCAATGG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGCTGGACTCACACTTaGGGGTTCCACACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCWTHT*GFHTCH
Trigger: GTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGGTATCTGGGCAGTGTaGACAATACCACAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKGIWAV*TIPQRS
Trigger: TGAGCGCTGTGGTATTGTCCACACTGCCCAGATACC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACAAGTGTCTGGTATCTaGGCAGTGTGGACAATACCA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTQVSGI*AVWTIP
Trigger: TGGTATTGTCCACACTGCCCAGATACCAGACACTTG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCCCAGCCAAAAGCTATaGAAATATATAGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIPSQKL*KYIVAV
Trigger: CACAGCAACTATATATTTCCATAGCTTTTGGCTGGG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACCAGATGTGGTCTTGTaGAGAGATATACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKPDVVL*RDIRRW
Trigger: CCACCTCCGTATATCTCTTCACAAGACCACATCTGG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATCACCACAGTCATCTTaGGAATCACACACCCAACTT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSPQSS*ESHTQL
Trigger: AAGTTGGGTGTGTGATTCTCAAGATGACTGTGGTGA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGAAGTAAATCCAAGCTaGGATCGTACCGCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKEVNPS*DRTASL
Trigger: GAGGCTAGCGGTACGATCTCAGCTTGGATTTACTTC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTATTCACATCAAAGTCTaGAGATCCATCAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIIHIKV*RSIRNW
Trigger: CCAATTTCTGATGGATCTTCAGACTTTGATGTGAAT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACCCTTGTCCTTGATCTaGGGCAAGATCAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKPLSLI*GKIKKR
Trigger: CCTCTTCTTGATCTTGCCTCAGATCAAGGACAAGGG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACAATCTCCCTTATGTaGTTCGTACCTAACAAAGTA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITISLM*FVPNKV
Trigger: TACTTTGTTAGGTACGAATCACATAAGGGAGATTGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCAGTTTGTTTCCCACTaGCAAGTTCATATGATAATG +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIQFVSH*QVHMIM
Trigger: CATTATCATATGAACTTGTCAGTGGGAAACAAACTG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGATTATGCCACTTGGTaGTCGTATTTGCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTDYATW*SYLLWS
Trigger: ACTCCAGAGCAAATACGAGCACCAAGTGGCATAATC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAGCAGTTGGAGGATTTaGTTCTTTGGCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSSWRI*FFGTDL
Trigger: GAGATCTGTGCCAAAGAAGCAAATCCTCCAACTGCT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTAAATATTTTAGCCATTaGCCACATGTTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIKYFSH*PHVGTS
Trigger: TGATGTGCCAACATGTGGGCAATGGCTAAAATATTT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTAACAACTGTAAGAGGTaGATGAGAATCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDINNCKR*MRIKSC
Trigger: ACAGCTTTTGATTCTCATGCACCTCTTACAGTTGTT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGTGATTATGCCACTTaGTGCTCGTATTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTCDYAT*CSYLLW
Trigger: CCAGAGCAAATACGAGCACCAAGTGGCATAATCACA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAAAAGCAGCAGCAGTTaGAGGATTTGCTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTKSSSS*RICFFG
Trigger: GCCAAAGAAGCAAATCCTCCAACTGCTGCTGCTTTT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATTCATCCCTTCCATTTaGGCAATGCCAATACCCATC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTFIPSI*AMPIPI
Trigger: GATGGGTATTGGCATTGCCCAAATGGAAGGGATGAA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACTTCTACTGCCGTTGTaGGAGGGACTTTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKLLLPL*EGLFEA
Trigger: TGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGCCATCTCGATTACTTaGCCTTACTCCAGGATTTGT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTAISIT*PYSRIC
Trigger: ACAAATCCTGGAGTAAGGCCAAGTAATCGAGATGGC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAACTGTAAGAGGTGCATaGGAATCAAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTTVRGA*ESKAVN
Trigger: GTTGACAGCTTTTGATTCTCATGCACCTCTTACAGT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATACATCCCAATGCTATaGCGAGTAACAGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKYIPML*RVTGHR
Trigger: TCTGTGGCCTGTTACTCGTCATAGCATTGGGATGTA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGCCAATGACCCAGAATaGCGTGATCTTGCAAAATTA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTANDPE*RDLAKL
Trigger: TAATTTTGCAAGATCACGTCATTCTGGGTCATTGGC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATCTCTACTGGTACTCTaGCTAGGGACAACCTCATCT +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKSLLVL*LGTTSS
Trigger: AGATGAGGTTGTCCCTAGTCAGAGTACCAGTAGAGA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACTAAGCCCTTGTCCTTaGTCTGAGGCAAGATCAAGA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKLSPCP*SEARSR
Trigger: TCTTGATCTTGCCTCAGATCAAGGACAAGGGCTTAG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACTTGGTGCTCGTATTTaGTCTGGAGTCTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKLGARI*SGVSPQ
Trigger: TTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGTCTATTAACCAGGTaGAATTGCTTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTCLLTR*NCFQED
Trigger: ATCCTCCTGGAAGCAATTGCACCTGGTTAATAGACA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAATGATTCTGGTAGTTaGAGCGATCAGAACGAGGAT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTNDSGS*SDQNED
Trigger: ATCCTCGTTCTGATCGCTGCAACTACCAGAATCATT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAGTCATACGACTGAGTaGACTTGTAAGCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKSHTTE*TCKLVT
Trigger: CGTCACCAGCTTACAAGTGCACTCAGTCGTATGACT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAATCCCTAGGGTCCAATaGAAGCGCAACCCTGTATTA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKIPRVQ*KRNPVL
Trigger: TAATACAGGGTTGCGCTTGCATTGGACCCTAGGGAT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAGTAATGATTTCGCCTaGGTTTGCCCTTATGAACCA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSNDFA*VCPYEP
Trigger: TGGTTCATAAGGGCAAACCCAGGCGAAATCATTACT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTCCAAATTGCACCTTCTaGATCCTTGAATATCAAAAT +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIPNCTF*ILEYQN
Trigger: ATTTTGATATTCAAGGATCCAGAAGGTGCAATTTGG...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAACCATTTCGGGAACATaGAAATTCTTCCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTTISGT*KFFLLA
Trigger: TGCCAGAAGGAAGAATTTCCATGTTCCCGAAATGGT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGATCAAGAAGAGGTCTaGAGCAGTCATTCACATCAA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTDQEEV*SSHSHQ
Trigger: TTGATGTGAATGACTGCTCCAGACCTCTTCTTGATC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTAGTTACAAGATGTGTTaGCAAAAGCATAAACGTTTC +
Preference number: 4 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISYKMC*QKHKRF
Trigger: GAAACGTTTATGCTTTTGCCAACACATCTTGTAACT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGCTCGTATTTGCTCTaGAGTCTCTCCACAAGCGTA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCSYLL*SLSTSV
Trigger: TACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATTACCACAACGAAACTaGTCACAAGCACAATTTGGT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTLPQRN*SQAQFG
Trigger: ACCAAATTGTGCTTGTGATCAGTTTCGTTGTGGTAA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAGAAGCCTGATTAGGTaGACAAACAGGAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTRSLIR*TNRKIF
Trigger: GAAGATTTTCCTGTTTGTTCACCTAATCAGGCTTCT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAAAGGACTCTGGTTCTaGCTTAGGGAACTTGATCGT +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKKGLWF*LRELDR
Trigger: ACGATCAAGTTCCCTAAGTCAGAACCAGAGTCCTTT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATTAACCAGGTGCAATTaGTTCCAGGAGGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTLTRCN*FQEDKS
Trigger: ACTTTTATCCTCCTGGAAGCAATTGCACCTGGTTAA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAATTTTCTTCATCGCTaGCATCACCACAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTNFLHR*HHHSHL
Trigger: AAGATGACTGTGGTGATGGCAGCGATGAAGAAAATT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAACATTTCCAGGCTTCTaGTATACACTTTCCATTACC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTTFPGF*YTLSIT
Trigger: GGTAATGGAAAGTGTATACCAGAAGCCTGGAAATGT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAAAAGCAGCAGCAGTTaGAGGATTTGCTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKKSSSS*RICFFG
Trigger: GCCAAAGAAGCAAATCCTCCAACTGCTGCTGCTTTT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAACAGGGTATTTCCCATaGCAAACAGAACCCATCTAC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKTGYFP*QTEPIY
Trigger: GTAGATGGGTTCTGTTTGCCATGGGAAATACCCTGT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATTCATCCCTTCCATTTaGGCAATGCCAATACCCATC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKFIPSI*AMPIPI
Trigger: GATGGGTATTGGCATTGCCCAAATGGAAGGGATGAA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACTTCCTTCTGGCACATaGTACAATTGGTTTCATCCC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKLPSGT*YNWFHP
Trigger: GGGATGAAACCAATTGTACCATGTGCCAGAAGGAAG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGGAAATTCTTCCTTCTaGCACATGGTACAATTGGTT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTGNSSF*HMVQLV
Trigger: AACCAATTGTACCATGTGCCAGAAGGAAGAATTTCC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACCCAGCCAAAAGCTATaGAAATATATAGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTPSQKL*KYIVAV
Trigger: CACAGCAACTATATATTTCCATAGCTTTTGGCTGGG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAAAATGACTTTACGGTaGTCACCAGTGTCTATTAAC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTKMTLR*SPVSIN
Trigger: GTTAATAGACACTGGTGATCACCGTAAAGTCATTTT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAACTGTAAGAGGTGCATaGGAATCAAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKTVRGA*ESKAVN
Trigger: GTTGACAGCTTTTGATTCTCATGCACCTCTTACAGT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGGTGGAATTAAACCCTaGGCAATCAATTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKGGIKP*AINCPY
Trigger: GTATGGACAATTGATTGCTCAGGGTTTAATTCCACC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAATTTTCAGAATGTTCTaGAAGAGCACCATTTCCGTA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTIFRMF*KSTISV
Trigger: TACGGAAATGGTGCTCTTGCAGAACATTCTGAAAAT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATCAACCAGTCCAAATTaGACCTTCTGGATCCTTGAA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKSTSPN*TFWILE
Trigger: TTCAAGGATCCAGAAGGTGCAATTTGGACTGGTTGA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAAATATTTTAGCCATTaGCCACATGTTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTKYFSH*PHVGTS
Trigger: TGATGTGCCAACATGTGGGCAATGGCTAAAATATTT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAACAACTGTAAGAGGTaGATGAGAATCAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTNNCKR*MRIKSC
Trigger: ACAGCTTTTGATTCTCATGCACCTCTTACAGTTGTT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAATGATTCTGGTAGTTaGAGCGATCAGAACGAGGAT +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKNDSGS*SDQNED
Trigger: ATCCTCGTTCTGATCGCTGCAACTACCAGAATCATT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGGCACATGGTACAATTaGTTTCATCCCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKGTWYN*FHPFHL
Trigger: CAAATGGAAGGGATGAAACCAATTGTACCATGTGCC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAACCATTTCGGGAACATaGAAATTCTTCCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKTISGT*KFFLLA
Trigger: TGCCAGAAGGAAGAATTTCCATGTTCCCGAAATGGT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGTAGGCACGATTACTaGGCAATTTTCTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCRHDY*AIFFIA
Trigger: AGCGATGAAGAAAATTGCCCAGTAATCGTGCCTACA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAATTTGTTGCATTATATaGTTGTCTAAGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTICCII*LSKPLS
Trigger: GGACAAGGGCTTAGACAACCATATAATGCAACAAAT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATTCCTCAGATTTCCCTaGAAAATATGCCAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKFLRFP*KICQSE
Trigger: TTCAGACTGGCATATTTTTCAGGGAAATCTGAGGAA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAGAAGCCTGATTAGGTaGACAAACAGGAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKRSLIR*TNRKIF
Trigger: GAAGATTTTCCTGTTTGTTCACCTAATCAGGCTTCT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR GCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAGCATTAAATCCCCTTaGAGCATTCACTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKSIKSP*SIHFIS
Trigger: GCTGATAAAGTGAATGCTGCAAGGGGATTTAATGCT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACCAAATTGCACCTTCTaGATCCTTGAATATCAAAAT +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTPNCTF*ILEYQN
Trigger: ATTTTGATATTCAAGGATCCAGAAGGTGCAATTTGG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CCA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAAGTTACAAGATGTGTTaGCAAAAGCATAAACGTTTC +
Preference number: 4 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSYKMC*QKHKRF
Trigger: GAAACGTTTATGCTTTTGCCAACACATCTTGTAACT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAAAAATGACTTTACGGTaGTCACCAGTGTCTATTAAC +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKKMTLR*SPVSIN
Trigger: GTTAATAGACACTGGTGATCACCGTAAAGTCATTTT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAATTCACATCAAAGTCTaGAGATCCATCAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKIHIKV*RSIRNW
Trigger: CCAATTTCTGATGGATCTTCAGACTTTGATGTGAAT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR TCA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAACAATCTCCCTTATGTaGTTCGTACCTAACAAAGTA +
Preference number: 4 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKTISLM*FVPNKV
Trigger: TACTTTGTTAGGTACGAATCACATAAGGGAGATTGT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS CCA 90 bp GGGGGCAAGGGCAAGGAGCTCGCGCGCCAGCGCGAGACGAGAGGGTaGCGGACGCCGGACTCCGGCCTCGCGCCGCTCGGGCTAGCCGGC +
Preference number: 5 (lower is better)
Translates to: GGKGKELARQRETRG*RTPDSGLAPLGLAG
Trigger: GCCGGCTAGCCCGAGCGGCGCGAGGCCGGAGTCCGGCGTCCGCCACCCTCTCGTCTCGCGCTGGCGCGCGAGCTCCTTGCCCTTGCCCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS CCA 90 bp CGGAGACTCTTTTGTGCTCCAGCGACAGGCCATAACCACAGCAGATaGAGAGAGAGAGGAGGAGACGGAGGAGGAGGGAGGAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RRLFCAPATGHNHSR*RERGGDGGGGRRSW
Trigger: CCAGCTTCTCCTCCCTCCTCCTCCGTCTCCTCCTCTCTCTCTCCATCTGCTGTGGTTATGGCCTGTCGCTGGAGCACAAAAGAGTCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS GCA 90 bp GAAGGCCAGCCTGGGCTTGTGATTATGCCACTTGGTGCTCGTATTTaGTCTGGAGTCTCTCCACAAGCGTACACCCCAGCGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: EGQPGLVIMPLGARI*SGVSPQAYTPARKS
Trigger: GCTTTTCCTCGCTGGGGTGTACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS GCA 90 bp AGGATATTCAGAAGGCCAGCCTGGGCTTGTGATTATGCCACTTGGTaGTCGTATTTGCTCTGGAGTCTCTCCACAAGCGTACACCCCAGC +
Preference number: 5 (lower is better)
Translates to: RIFRRPAWACDYATW*SYLLWSLSTSVHPS
Trigger: GCTGGGGTGTACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCTGAATATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CCA 90 bp TTGAGGAACTTGCACATGCTCCTACTGTCGCTTCTACTGCCGTTGTaGGAGGGACTTTTTGAGGCAAAGGAGCTGCAACCCCACCAGATG +
Preference number: 5 (lower is better)
Translates to: LRNLHMLLLSLLLPL*EGLFEAKELQPHQM
Trigger: CATCTGGTGGGGTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 90 bp CCCCTGAGTCATACGACTGAGTGCACTTGTAAGCTGGTGACGTGCTaGACTCACACTTGGGGGTTCCACACTTGTCACATCCCTTCCATT +
Preference number: 5 (lower is better)
Translates to: PLSHTTECTCKLVTC*THTWGFHTCHIPSI
Trigger: AATGGAAGGGATGTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGCACTCAGTCGTATGACTCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 90 bp TGCAGGATATTCAGAAGGCCAGCCTGGGCTTGTGATTATGCCACTTaGTGCTCGTATTTGCTCTGGAGTCTCTCCACAAGCGTACACCCC +
Preference number: 5 (lower is better)
Translates to: CRIFRRPAWACDYAT*CSYLLWSLSTSVHP
Trigger: GGGGTGTACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCTGAATATCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CCA 90 bp ACGACTGAGTGCACTTGTAAGCTGGTGACGTGCTGGACTCACACTTaGGGGTTCCACACTTGTCACATCCCTTCCATTATCTGCATGACC +
Preference number: 5 (lower is better)
Translates to: TTECTCKLVTCWTHT*GFHTCHIPSIICMT
Trigger: GGTCATGCAGATAATGGAAGGGATGTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGCACTCAGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS TCA 90 bp CACATCCCTTCCATTATCTGCATGACCACCTCGGGTACTCTGAGTTaGGGAACTTGCACATGCTCCTACTGTCGCTTCTACTGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: HIPSIICMTTSGTLS*GTCTCSYCRFYCRC
Trigger: ACAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGGTCATGCAGATAATGGAAGGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS GCA 90 bp GAAGGCCAGCCTGGGCTTGTGATTATGCCACTTGGTGCTCGTATTTaGTCTGGAGTCTCTCCACAAGCAGTTGACACTCCTGAAATATGC +
Preference number: 5 (lower is better)
Translates to: EGQPGLVIMPLGARI*SGVSPQAVDTPEIC
Trigger: GCATATTTCAGGAGTGTCAACTGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACCCTGAGCAATCAATaGTCCATACGAGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITLSNQ*SIRGRS
Trigger: GCTCCTCCCTCGTATGGACAATTGATTGCTCAGGGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTCGCTTCTACTGCCGTaGTGGGAGGGACTTTTTGAG +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISLLLP*WEGLFE
Trigger: CTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS CCA 90 bp TTTTTCAGTGTTACTTCTAAGCAAGTGTCTGGTATCTGGGCAGTGTaGACAATACCACAGCGCTCACAGGGGCCATCTCGATTACTTGGC +
Preference number: 5 (lower is better)
Translates to: FFSVTSKQVSGIWAV*TIPQRSQGPSRLLG
Trigger: GCCAAGTAATCGAGATGGCCCCTGTGAGCGCTGTGGTATTGTCCACACTGCCCAGATACCAGACACTTGCTTAGAAGTAACACTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACTTGGTGCTCGTATTaGCTCTGGAGTCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITWCSY*LWSLST
Trigger: TGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGCCATTGCCCACATGTaGGCACATCACAGTCTATCT +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIAIAHM*AHHSLS
Trigger: AGATAGACTGTGATGTGCCAACATGTGGGCAATGGC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTCTGAGTTGAGGAACTaGCACATGCTCCTACTGTCG +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISELRN*HMLLLS
Trigger: CGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGGCCATCTCGATTACTaGGCCTTACTCCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIGHLDY*ALLQDL
Trigger: CAAATCCTGGAGTAAGGCCAAGTAATCGAGATGGCC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS GCA 90 bp GATTTCGCCTGGGTTTGCCCTTATGAACCAGCTACAGTTGATTTTTaGAGGATATTCAGAAGGCCAGCCTGGGCTTGTGATTATGCCACT +
Preference number: 5 (lower is better)
Translates to: DFAWVCPYEPATVDF*RIFRRPAWACDYAT
Trigger: AGTGGCATAATCACAAGCCCAGGCTGGCCTTCTGAATATCCTGCAAAAATCAACTGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CCA 90 bp GAACCAGCTACAGTTGATTTTTGCAGGATATTCAGAAGGCCAGCCTaGGCTTGTGATTATGCCACTTGGTGCTCGTATTTGCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EPATVDFCRIFRRPA*ACDYATWCSYLLWS
Trigger: ACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCTGAATATCCTGCAAAAATCAACTGTAGCTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAACCGCGGAGACTCTTTaGTGCTCCAGCGACAGGCCA +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKTAETL*CSSDRP
Trigger: TGGCCTGTCGCTGGAGCACAAAAGAGTCTCCGCGGT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS GCA 90 bp CTGGTTGTAAGCACAGGGTTGAAAAGCAGCAGCAGTTGGAGGATTTaGTTCTTTGGCACAGATCTCTTCATCGGAACTATCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: LVVSTGLKSSSSWRI*FFGTDLFIGTISTF
Trigger: GAATGTGGAGATAGTTCCGATGAAGAGATCTGTGCCAAAGAAGCAAATCCTCCAACTGCTGCTGCTTTTCAACCCTGTGCTTACAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CCA 90 bp CTGCTCAGTATAACACCCCCAGTTACCTCCACAGGGTATTTCCCATaGCAAACAGAACCCATCTACTTGGTAAGTAGCATTAAATCCCCT +
Preference number: 5 (lower is better)
Translates to: LLSITPPVTSTGYFP*QTEPIYLVSSIKSP
Trigger: AGGGGATTTAATGCTACTTACCAAGTAGATGGGTTCTGTTTGCCATGGGAAATACCCTGTGGAGGTAACTGGGGGTGTTATACTGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTATCACCACAGTCATCTaGAGAATCACACACCCAACT +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIITTVI*RITHPT
Trigger: AGTTGGGTGTGTGATTCTCAAGATGACTGTGGTGAT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAACCCTGAGCAATCAATaGTCCATACGAGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTTLSNQ*SIRGRS
Trigger: GCTCCTCCCTCGTATGGACAATTGATTGCTCAGGGT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGTGGGAGGGACTTTTaGAGGCAAAGGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTCGRDF*RQRSCN
Trigger: GTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACTCGGGTACTCTGAGTaGAGGAACTTGCACATGCTC +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTLGYSE*RNLHML
Trigger: GAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS CCA 90 bp TTCTTCCTTCTGGCACATGGTACAATTGGTTTCATCCCTTCCATTTaGGCAATGCCAATACCCATCACAACGCTGCTGCTCAGTATAACA +
Preference number: 5 (lower is better)
Translates to: FFLLAHGTIGFIPSI*AMPIPITTLLLSIT
Trigger: TGTTATACTGAGCAGCAGCGTTGTGATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CCA 90 bp GTTGCAGCGATCAGAACGAGGATAACAGACACCATTTCGGGAACATaGAAATTCTTCCTTCTGGCACATGGTACAATTGGTTTCATCCCT +
Preference number: 5 (lower is better)
Translates to: VAAIRTRITDTISGT*KFFLLAHGTIGFIP
Trigger: AGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTTCCCGAAATGGTGTCTGTTATCCTCGTTCTGATCGCTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAACTTGGTGCTCGTATTaGCTCTGGAGTCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTTWCSY*LWSLST
Trigger: TGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGT...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGTTGTAAGCACAGGGTaGAAAAGCAGCAGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTVVSTG*KSSSSW
Trigger: CCAACTGCTGCTGCTTTTCAACCCTGTGCTTACAAC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATCTGAGTTGAGGAACTaGCACATGCTCCTACTGTCG +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTSELRN*HMLLLS
Trigger: CGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGTGCTGGACTCACACTaGGGGGTTCCACACTTGTCA +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKVLDSH*GVPHLS
Trigger: TGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCAC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTACCCCATTATCAAGTaGTCTCAAAGGACTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIYPIIK*SQRTLV
Trigger: AACCAGAGTCCTTTGAGACAACTTGATAATGGGGTA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTGCCTTACTCCAGGATTaGTTGCATTATATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDIALLQD*LHYMVV
Trigger: GACAACCATATAATGCAACAAATCCTGGAGTAAGGC...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp CTTCCACTTACCCCATTATCAAGTTGTCTCAAAGGACTCTGGTTCTaGCTTAGGGAACTTGATCGTCCTAATGTAAAACGTACCCAGCGT +
Preference number: 5 (lower is better)
Translates to: LPLTPLSSCLKGLWF*LRELDRPNVKRTQR
Trigger: ACGCTGGGTACGTTTTACATTAGGACGATCAAGTTCCCTAAGTCAGAACCAGAGTCCTTTGAGACAACTTGATAATGGGGTAAGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS TCA 90 bp ACTCCAGGATTTGTTGCATTATATGGTTGTCTAAGCCCTTGTCCTTaGTCTGAGGCAAGATCAAGAAGAGGTCTGGAGCAGTCATTCACA +
Preference number: 5 (lower is better)
Translates to: TPGFVALYGCLSPCP*SEARSRRGLEQSFT
Trigger: TGTGAATGACTGCTCCAGACCTCTTCTTGATCTTGCCTCAGATCAAGGACAAGGGCTTAGACAACCATATAATGCAACAAATCCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 90 bp CATTTCGGGAACATGGAAATTCTTCCTTCTGGCACATGGTACAATTaGTTTCATCCCTTCCATTTGGGCAATGCCAATACCCATCACAAC +
Preference number: 5 (lower is better)
Translates to: HFGNMEILPSGTWYN*FHPFHLGNANTHHN
Trigger: GTTGTGATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTTCCCGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACACAGCAGTTGGAGGATTaGCTTCTTTGGCACAGATCT +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTQQLED*LLWHRS
Trigger: AGATCTGTGCCAAAGAAGCAAATCCTCCAACTGCTG...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTACAGAACCCATCTACTaGGTAAGTAGCATTAAATCC +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDITEPIY*VSSIKS
Trigger: GGATTTAATGCTACTTACCAAGTAGATGGGTTCTGT...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGTGGGAGGGACTTTTaGAGGCAAAGGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCGRDF*RQRSCN
Trigger: GTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACTCGGGTACTCTGAGTaGAGGAACTTGCACATGCTC +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKLGYSE*RNLHML
Trigger: GAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp AGAGATGTTGTCATCCGAATGAAACCTAATCCAGATGTGGTCTTGTaGAGAGATATACGGAGGTGGAATTGTGGAACCACAAGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: RDVVIRMKPNPDVVL*RDIRRWNCGTTSSV
Trigger: TACAGAGCTTGTGGTTCCACAATTCCACCTCCGTATATCTCTTCACAAGACCACATCTGGATTAGGTTTCATTCGGATGACAACATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS-3UTR CAA 90 bp GTGCAAATCCCTAGGGTCCAATGCAAGCGCAACCCTGTATTAGGGAAAGACATTTCTTGTATGTTTCTATaGTCAACCAGTCCAAATTGC +
Preference number: 5 (lower is better)
Translates to: VQIPRVQCKRNPVLGKDISCMFL*STSPNC
Trigger: GCAATTTGGACTGGTTGACAATAGAAACATACAAGA...AATGTCTTTCCCTAATACAGGGTTGCGCTTGCATTGGACCCTAGGGATTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGATCACAAGCACAATTaGGTTCCTCAGATTTCCCTG +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTDHKHN*VPQISL
Trigger: CAGGGAAATCTGAGGAACCAAATTGTGCTTGTGATC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGCCATTGCCCACATGTaGGCACATCACAGTCTATCT +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKAIAHM*AHHSLS
Trigger: AGATAGACTGTGATGTGCCAACATGTGGGCAATGGC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATTTCATCCCTTCCATTaGGGCAATGCCAATACCCAT +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTFHPFH*GNANTH
Trigger: ATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAGGCCATCTCGATTACTaGGCCTTACTCCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKGHLDY*ALLQDL
Trigger: CAAATCCTGGAGTAAGGCCAAGTAATCGAGATGGCC...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp GTACCATCAAGTTTAAAGTCAGTGAAGCGTAAAATGACTTTACGGTaGTCACCAGTGTCTATTAACCAGGTGCAATTGCTTCCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: VPSSLKSVKRKMTLR*SPVSINQVQLLPGG
Trigger: TCCTCCTGGAAGCAATTGCACCTGGTTAATAGACACTGGTGATCACCGTAAAGTCATTTTACGCTTCACTGACTTTAAACTTGATGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp TGTACCCTTATCTGTCCAGAAGAAGAAACAACTGTAAGAGGTGCATaGGAATCAAAAGCTGTCAACACACGCAAAAGCTTGTGTGGATTC +
Preference number: 5 (lower is better)
Translates to: CTLICPEEETTVRGA*ESKAVNTRKSLCGF
Trigger: GAATCCACACAAGCTTTTGCGTGTGTTGACAGCTTTTGATTCTCATGCACCTCTTACAGTTGTTTCTTCTTCTGGACAGATAAGGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS TCA 90 bp AGGATTTGTTGCATTATATGGTTGTCTAAGCCCTTGTCCTTGATCTaGGGCAAGATCAAGAAGAGGTCTGGAGCAGTCATTCACATCAAA +
Preference number: 5 (lower is better)
Translates to: RICCIIWLSKPLSLI*GKIKKRSGAVIHIK
Trigger: TTTGATGTGAATGACTGCTCCAGACCTCTTCTTGATCTTGCCTCAGATCAAGGACAAGGGCTTAGACAACCATATAATGCAACAAATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS TCA 90 bp TCTATGTTCCCCTACTTGGGTCTACATTCCAGAACAAGTCTTAAATaGTGGTTCAGAGTATTACAGATCCTTTCATGGAGTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SMFPYLGLHSRTSLK*WFRVLQILSWSQQV
Trigger: CACCTGCTGACTCCATGAAAGGATCTGTAATACTCTGAACCATCATTTAAGACTTGTTCTGGAATGTAGACCCAAGTAGGGGAACATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATATACGGAGGTGGAATaGTGGAACCACAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKYTEVE*WNHKLC
Trigger: ACAGAGCTTGTGGTTCCACAATTCCACCTCCGTATA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAACAGCAGTTGGAGGATTaGCTTCTTTGGCACAGATCT +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKQQLED*LLWHRS
Trigger: AGATCTGTGCCAAAGAAGCAAATCCTCCAACTGCTG...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGGCACATGGTACAATaGGTTTCATCCCTTCCATTT +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTWHMVQ*VSSLPF
Trigger: AAATGGAAGGGATGAAACCAATTGTACCATGTGCCA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATTGGGGGTTCCACACTaGTCACATCCCTTCCATTAT +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKLGVPH*SHPFHY
Trigger: ATAATGGAAGGGATGTGACAAGTGTGGAACCCCCAA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATACCCCATTATCAAGTaGTCTCAAAGGACTCTGGTT +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTYPIIK*SQRTLV
Trigger: AACCAGAGTCCTTTGAGACAACTTGATAATGGGGTA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACATGTTGCATTATATGGTaGTCTAAGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTCCIIW*SKPLSL
Trigger: CAAGGACAAGGGCTTAGACAACCATATAATGCAACA...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGCCTTACTCCAGGATTaGTTGCATTATATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTALLQD*LHYMVV
Trigger: GACAACCATATAATGCAACAAATCCTGGAGTAAGGC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp AAATATGCCAGTCTGAAACCCTTTCTAGAGATGTTGTCATCCGAATaGAACCTAATCCAGATGTGGTCTTGTGAAGAGATATACGGAGGT +
Preference number: 5 (lower is better)
Translates to: KYASLKPFLEMLSSE*NLIQMWSCEEIYGG
Trigger: ACCTCCGTATATCTCTTCACAAGACCACATCTGGATTAGGTTTCATTCGGATGACAACATCTCTAGAAAGGGTTTCAGACTGGCATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS TCA 90 bp CATTTACTGAATATATGTATTATCCCTACAGTGGGAATACAAAGCTaGCGCAGGCAGTCTGTCTTCATAGGGCTTTATGCTAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: HLLNICIIPTVGIQS*RRQSVFIGLYASRS
Trigger: GCTTCTACTAGCATAAAGCCCTATGAAGACAGACTGCCTGCGTCAGCTTTGTATTCCCACTGTAGGGATAATACATATATTCAGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518375.1
ENST00000522046.1
CDS TCA 90 bp AATGATGGTTCAGAGTATTACAGATCCTTTCATGGAGTCAGCAGGTaGCATAGTTATTCATGTTTGTTAGGTTATGCCCTCTCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: NDGSEYYRSFHGVSR*HSYSCLLGYALSAL
Trigger: GAGAGCTGAGAGGGCATAACCTAACAAACATGAATAACTATGTCACCTGCTGACTCCATGAAAGGATCTGTAATACTCTGAACCATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS GCA 90 bp TGGCAAACAGAACCCATCTACTTGGTAAGTAGCATTAAATCCCCTTaGAGCATTCACTTTATCAGCACAAAAATGTACCCTTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: WQTEPIYLVSSIKSP*SIHFISTKMYPYLS
Trigger: GGACAGATAAGGGTACATTTTTGTGCTGATAAAGTGAATGCTGCAAGGGGATTTAATGCTACTTACCAAGTAGATGGGTTCTGTTTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATCTCTCCACAAGCAGTaGACACTCCTGAAATATGCA +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKSLHKQ*TLLKYA
Trigger: TGCATATTTCAGGAGTGTCAACTGCTTGTGGAGAGA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAATCACCACAGTCATCTaGAGAATCACACACCCAACT +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKITTVI*RITHPT
Trigger: AGTTGGGTGTGTGATTCTCAAGATGACTGTGGTGAT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp AAGCGCAACCCTGTATTAGGGAAAGACATTACCAGGTGGAACTTATCTTGTACAGGATATTGCTCCAACTaGTATACAATCTCCCTTATG +
Preference number: 5 (lower is better)
Translates to: KRNPVLGKDITRWNLSCTGYCSN*YTISLM
Trigger: CATAAGGGAGATTGTATACAAGTTGGAGCAATATCC...TGTACAAGATAAGTTCCACCTGGTAATGTCTTTCCCTAATACAGGGTTGCGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS CCA 90 bp GGAACTATCTCCACATTCATCCATGTTATTACATTTCCAGGCTTCTaGTATACACTTTCCATTACCACAACGAAACTGATCACAAGCACA +
Preference number: 5 (lower is better)
Translates to: GTISTFIHVITFPGF*YTLSITTTKLITST
Trigger: TGTGCTTGTGATCAGTTTCGTTGTGGTAATGGAAAGTGTATACCAGAAGCCTGGAAATGTAATAACATGGATGAATGTGGAGATAGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGGCACATGGTACAATaGGTTTCATCCCTTCCATTT +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKWHMVQ*VSSLPF
Trigger: AAATGGAAGGGATGAAACCAATTGTACCATGTGCCA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATGTTGCATTATATGGTaGTCTAAGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKCCIIW*SKPLSL
Trigger: CAAGGACAAGGGCTTAGACAACCATATAATGCAACA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp CATTTCCAGGCTTCTGGTATACACTTTCCATTACCACAACGAAACTaGTCACAAGCACAATTTGGTTCCTCAGATTTCCCTGAAAAATAT +
Preference number: 5 (lower is better)
Translates to: HFQASGIHFPLPQRN*SQAQFGSSDFPEKY
Trigger: ATATTTTTCAGGGAAATCTGAGGAACCAAATTGTGCTTGTGATCAGTTTCGTTGTGGTAATGGAAAGTGTATACCAGAAGCCTGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAACAGAACCCATCTACTaGGTAAGTAGCATTAAATCC +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKTEPIY*VSSIKS
Trigger: GGATTTAATGCTACTTACCAAGTAGATGGGTTCTGT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAATTCTGCTTCCACTCTaGACAACTGTGTTTCAAATG +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKILLPL*TTVFQM
Trigger: CATTTGAAACACAGTTGTCAAGAGTGGAAGCAGAAT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS TCA 90 bp TCTAAATCTAAAATTCTATGCCTCCTACCCATACAATGTTACACATaGAAACATGTTGAAGGTGCCTTTGTGCTACACTGTCTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SKSKILCLLPIQCYT*KHVEGAFVLHCLCD
Trigger: ATCACAGAGACAGTGTAGCACAAAGGCACCTTCAACATGTTTTCATGTGTAACATTGTATGGGTAGGAGGCATAGAATTTTAGATTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS GCA 90 bp TACAGAAAGGTAGAATTACCTTATAGTAATGATTTCGCCTGGGTTTaGCCTTATGAACCAGCTACAGTTGATTTTTGCAGGATATTCAGA +
Preference number: 5 (lower is better)
Translates to: YRKVELPYSNDFAWV*PYEPATVDFCRIFR
Trigger: TCTGAATATCCTGCAAAAATCAACTGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAATCATTACTATAAGGTAATTCTACCTTTCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAAATGAACCAGCTACAGTaGATTTTTGCAGGATATTCA +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKMNQLQ*IFAGYS
Trigger: TGAATATCCTGCAAAAATCAACTGTAGCTGGTTCAT...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS-3UTR CAA 90 bp CAAATGAGTTTCAGCAGCCACATTTCTACAGTGAACTACAGTATCAGGATGAAATCTTGTATGTTTCTATaGTCAACCAGTCCAAATTGC +
Preference number: 5 (lower is better)
Translates to: QMSFSSHISTVNYSIRMKSCMFL*STSPNC
Trigger: GCAATTTGGACTGGTTGACAATAGAAACATACAAGA...TTTCATCCTGATACTGTAGTTCACTGTAGAAATGTGGCTGCTGAAACTCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS CCA 72 bp GGCAAGGAGCTCGCGCGCCAGCGCGAGACGAGAGGGTaGCGGACGCCGGACTCCGGCCTCGCGCCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: GKELARQRETRG*RTPDSGLAPLG
Trigger: CCCGAGCGGCGCGAGGCCGGAGTCCGGCGTCCGCCACCCTCTCGTCTCGCGCTGGCGCGCGAGCTCCTTGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS CCA 72 bp TTTTGTGCTCCAGCGACAGGCCATAACCACAGCAGATaGAGAGAGAGAGGAGGAGACGGAGGAGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: FCAPATGHNHSR*RERGGDGGGGR
Trigger: CCTCCCTCCTCCTCCGTCTCCTCCTCTCTCTCTCCATCTGCTGTGGTTATGGCCTGTCGCTGGAGCACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS GCA 72 bp CCTGGGCTTGTGATTATGCCACTTGGTGCTCGTATTTaGTCTGGAGTCTCTCCACAAGCGTACACCCCAGCG +
Preference number: 6 (lower is better)
Translates to: PGLVIMPLGARI*SGVSPQAYTPA
Trigger: CGCTGGGGTGTACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CAA 72 bp TACTGTCGCTTCTACTGCCGTTGTGGGAGGGACTTTTaGAGGCAAAGGAGCTGCAACCCCACCAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: YCRFYCRCGRDF*RQRSCNPTRCS
Trigger: GGAGCATCTGGTGGGGTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 72 bp GCCTGGGCTTGTGATTATGCCACTTGGTGCTCGTATTaGCTCTGGAGTCTCTCCACAAGCGTACACCCCAGC +
Preference number: 6 (lower is better)
Translates to: AWACDYATWCSY*LWSLSTSVHPS
Trigger: GCTGGGGTGTACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CAA 90 bp ACATGCTCCTACTGTCGCTTCTACTGCCGTTGTGGGAGGGACTTTTaGAGGCAAAGGAGCTGCAACCCCACCAGATGCTCCTGCCATATC +
Preference number: 6 (lower is better)
Translates to: TCSYCRFYCRCGRDF*RQRSCNPTRCSCHI
Trigger: GATATGGCAGGAGCATCTGGTGGGGTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTAGGAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 90 bp GAGTTGAGGAACTTGCACATGCTCCTACTGTCGCTTCTACTGCCGTaGTGGGAGGGACTTTTTGAGGCAAAGGAGCTGCAACCCCACCAG +
Preference number: 6 (lower is better)
Translates to: ELRNLHMLLLSLLLP*WEGLFEAKELQPHQ
Trigger: CTGGTGGGGTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 90 bp AGAAGGCCAGCCTGGGCTTGTGATTATGCCACTTGGTGCTCGTATTaGCTCTGGAGTCTCTCCACAAGCGTACACCCCAGCGAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: RRPAWACDYATWCSY*LWSLSTSVHPSEEK
Trigger: CTTTTCCTCGCTGGGGTGTACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS GCA 72 bp TGCCGTTGTGGGAGGGACTTTTTGAGGCAAAGGAGCTaGAACCCCACCAGATGCTCCTGCCATATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: CRCGRDFLRQRS*NPTRCSCHISS
Trigger: AGAAGAGATATGGCAGGAGCATCTGGTGGGGTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 72 bp TTGCACATGCTCCTACTGTCGCTTCTACTGCCGTTGTaGGAGGGACTTTTTGAGGCAAAGGAGCTGCAACCC +
Preference number: 6 (lower is better)
Translates to: LHMLLLSLLLPL*EGLFEAKELQP
Trigger: GGGTTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 72 bp CTGCATGACCACCTCGGGTACTCTGAGTTGAGGAACTaGCACATGCTCCTACTGTCGCTTCTACTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: LHDHLGYSELRN*HMLLLSLLLPL
Trigger: CAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGGTCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 72 bp GGTGACGTGCTGGACTCACACTTGGGGGTTCCACACTaGTCACATCCCTTCCATTATCTGCATGACCACCTC +
Preference number: 6 (lower is better)
Translates to: GDVLDSHLGVPH*SHPFHYLHDHL
Trigger: GAGGTGGTCATGCAGATAATGGAAGGGATGTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCACGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS GCA 72 bp AGAAGGCCAGCCTGGGCTTGTGATTATGCCACTTGGTaGTCGTATTTGCTCTGGAGTCTCTCCACAAGCAGT +
Preference number: 6 (lower is better)
Translates to: RRPAWACDYATW*SYLLWSLSTSS
Trigger: ACTGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS GCA 72 bp AGTCATACGACTGAGTGCACTTGTAAGCTGGTGACGTaGTGGACTCACACTTGGGGGTTCCACACTTGTCAC +
Preference number: 6 (lower is better)
Translates to: SHTTECTCKLVT*WTHTWGFHTCH
Trigger: GTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGCACTCAGTCGTATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS GCA 72 bp AGAAGGCCAGCCTGGGCTTGTGATTATGCCACTTGGTaGTCGTATTTGCTCTGGAGTCTCTCCACAAGCGTA +
Preference number: 6 (lower is better)
Translates to: RRPAWACDYATW*SYLLWSLSTSV
Trigger: TACGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CCA 72 bp TTCAGAAGGCCAGCCTGGGCTTGTGATTATGCCACTTaGTGCTCGTATTTGCTCTGGAGTCTCTCCACAAGC +
Preference number: 6 (lower is better)
Translates to: FRRPAWACDYAT*CSYLLWSLSTS
Trigger: GCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CCA 72 bp CATACGACTGAGTGCACTTGTAAGCTGGTGACGTGCTaGACTCACACTTGGGGGTTCCACACTTGTCACATC +
Preference number: 6 (lower is better)
Translates to: HTTECTCKLVTC*THTWGFHTCHI
Trigger: GATGTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGCACTCAGTCGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 72 bp GTTACTTCTAAGCAAGTGTCTGGTATCTGGGCAGTGTaGACAATACCACAGCGCTCACAGGGGCCATCTCGA +
Preference number: 6 (lower is better)
Translates to: VTSKQVSGIWAV*TIPQRSQGPSR
Trigger: TCGAGATGGCCCCTGTGAGCGCTGTGGTATTGTCCACACTGCCCAGATACCAGACACTTGCTTAGAAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 72 bp CTCCTGTCTGGAGCAAAATTGCCCGTCCCTAGTCCTTaGCTTCAAGCAGGGTGCTGGTATTCAATCCTCTCT +
Preference number: 6 (lower is better)
Translates to: LLSGAKLPVPSP*LQAGCWYSILS
Trigger: AGAGAGGATTGAATACCAGCACCCTGCTTGAAGCCAAGGACTAGGGACGGGCAATTTTGCTCCAGACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CAA 90 bp TTCCATTATCTGCATGACCACCTCGGGTACTCTGAGTTGAGGAACTaGCACATGCTCCTACTGTCGCTTCTACTGCCGTTGTGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: FHYLHDHLGYSELRN*HMLLLSLLLPLWEG
Trigger: TCCCTCCCACAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGGTCATGCAGATAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 90 bp TCACATCCCTTCCATTATCTGCATGACCACCTCGGGTACTCTGAGTaGAGGAACTTGCACATGCTCCTACTGTCGCTTCTACTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: SHPFHYLHDHLGYSE*RNLHMLLLSLLLPL
Trigger: CAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGGTCATGCAGATAATGGAAGGGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS GCA 72 bp CCTGGGCTTGTGATTATGCCACTTGGTGCTCGTATTTaGTCTGGAGTCTCTCCACAAGCAGTTGACACTCCT +
Preference number: 6 (lower is better)
Translates to: PGLVIMPLGARI*SGVSPQAVDTP
Trigger: AGGAGTGTCAACTGCTTGTGGAGAGACTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276654.10
CDS CCA 72 bp TGCACTTGTAAGCTGGTGACGTGCTGGACTCACACTTaGGGGTTCCACACTTGTCACATCCCTTCCATTATC +
Preference number: 6 (lower is better)
Translates to: CTCKLVTCWTHT*GFHTCHIPSII
Trigger: GATAATGGAAGGGATGTGACAAGTGTGGAACCCCCAAGTGTGAGTCCAGCACGTCACCAGCTTACAAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 72 bp AACTTGCACATGCTCCTACTGTCGCTTCTACTGCCGTaGTGGGAGGGACTTTTTGAGGCAAAGGAGCTGCAA +
Preference number: 6 (lower is better)
Translates to: NLHMLLLSLLLP*WEGLFEAKELQ
Trigger: TTGCAGCTCCTTTGCCTCAAAAAGTCCCTCCCACAACGGCAGTAGAAGCGACAGTAGGAGCATGTGCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS TCA 72 bp TCCATTATCTGCATGACCACCTCGGGTACTCTGAGTTaGGGAACTTGCACATGCTCCTACTGTCGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: SIICMTTSGTLS*GTCTCSYCRFY
Trigger: GTAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGGTCATGCAGATAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 72 bp CTGGCACATGGTACAATTGGTTTCATCCCTTCCATTTaGGCAATGCCAATACCCATCACAACGCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LAHGTIGFIPSI*AMPIPITTLLL
Trigger: GAGCAGCAGCGTTGTGATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CAA 72 bp TTGCAATGTGGTAAAAAGTTTTCTGGCCATTTACACTaGGCCAAAGATGCAGTGGTCGGGCGCCGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: LQCGKKFSGHLH*AKDAVVGRRGS
Trigger: TGAGCCACGGCGCCCGACCACTGCATCTTTGGCCAAGTGTAAATGGCCAGAAAACTTTTTACCACATTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518375.1
ENST00000522046.1
CDS TCA 72 bp TTTTTGCAGGATATTCAGAAGGCCAGCCTGGGCTTGTaGTTATGCCACTTGGTGCTCGTATTTGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: FLQDIQKASLGL*LCHLVLVFALE
Trigger: CTCCAGAGCAAATACGAGCACCAAGTGGCATAATCACAAGCCCAGGCTGGCCTTCTGAATATCCTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CAA 72 bp ATTTCGCCTGGGTTTGCCCTTATGAACCAGCTACAGTaGATTTTTGCAGGATATTCAGAAGGCCAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: ISPGFALMNQLQ*IFAGYSEGQPG
Trigger: CCCAGGCTGGCCTTCTGAATATCCTGCAAAAATCAACTGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CAA 72 bp TCTGGCACATGGTACAATTGGTTTCATCCCTTCCATTaGGGCAATGCCAATACCCATCACAACGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SGTWYNWFHPFH*GNANTHHNAAA
Trigger: AGCAGCAGCGTTGTGATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CAA 72 bp TTCCATTATCTGCATGACCACCTCGGGTACTCTGAGTaGAGGAACTTGCACATGCTCCTACTGTCGCTTCTA +
Preference number: 6 (lower is better)
Translates to: FHYLHDHLGYSE*RNLHMLLLSLL
Trigger: TAGAAGCGACAGTAGGAGCATGTGCAAGTTCCTCAACTCAGAGTACCCGAGGTGGTCATGCAGATAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 72 bp TGCTGGTATTCAATCCTCTCTTCCCCATGGATAAGGTaGCCTTTGTTGATTATAGTGGGTTCCAAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: CWYSILSSPWIR*PLLIIVGSKGE
Trigger: CTCTCCCTTGGAACCCACTATAATCAACAAAGGCCACCTTATCCATGGGGAAGAGAGGATTGAATACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CAA 72 bp AGAAAAACACTGCATGGAGGAGGAGAACAACAGCTTTaGTATGTGCCAAGCTCTGGGGTTCCAGAAGAGGTA +
Preference number: 6 (lower is better)
Translates to: RKTLHGGGEQQL*YVPSSGVPEEV
Trigger: TACCTCTTCTGGAACCCCAGAGCTTGGCACATACAAAAGCTGTTGTTCTCCTCCTCCATGCAGTGTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CAA 90 bp ACTGGTTGTAAGCACAGGGTTGAAAAGCAGCAGCAGTTGGAGGATTaGCTTCTTTGGCACAGATCTCTTCATCGGAACTATCTCCACATT +
Preference number: 6 (lower is better)
Translates to: TGCKHRVEKQQQLED*LLWHRSLHRNYLHI
Trigger: AATGTGGAGATAGTTCCGATGAAGAGATCTGTGCCAAAGAAGCAAATCCTCCAACTGCTGCTGCTTTTCAACCCTGTGCTTACAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 90 bp ATTCTTCCTTCTGGCACATGGTACAATTGGTTTCATCCCTTCCATTaGGGCAATGCCAATACCCATCACAACGCTGCTGCTCAGTATAAC +
Preference number: 6 (lower is better)
Translates to: ILPSGTWYNWFHPFH*GNANTHHNAAAQYN
Trigger: GTTATACTGAGCAGCAGCGTTGTGATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CCA 72 bp ATAACACCCCCAGTTACCTCCACAGGGTATTTCCCATaGCAAACAGAACCCATCTACTTGGTAAGTAGCATT +
Preference number: 6 (lower is better)
Translates to: ITPPVTSTGYFP*QTEPIYLVSSI
Trigger: AATGCTACTTACCAAGTAGATGGGTTCTGTTTGCCATGGGAAATACCCTGTGGAGGTAACTGGGGGTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CAA 90 bp ATAGTAATGATTTCGCCTGGGTTTGCCCTTATGAACCAGCTACAGTaGATTTTTGCAGGATATTCAGAAGGCCAGCCTGGGCTTGTGATT +
Preference number: 6 (lower is better)
Translates to: IVMISPGFALMNQLQ*IFAGYSEGQPGLVI
Trigger: AATCACAAGCCCAGGCTGGCCTTCTGAATATCCTGCAAAAATCAACTGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAATCATTACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000519675.1
ENST00000520770.1
CDS CAA 90 bp GTTACCTCCACAGGGTATTTCCCATGGCAAACAGAACCCATCTACTaGGTAAGTAGCATTAAATCCCCTTGCAGCATTCACTTTATCAGC +
Preference number: 6 (lower is better)
Translates to: VTSTGYFPWQTEPIY*VSSIKSPCSIHFIS
Trigger: GCTGATAAAGTGAATGCTGCAAGGGGATTTAATGCTACTTACCAAGTAGATGGGTTCTGTTTGCCATGGGAAATACCCTGTGGAGGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CAA 90 bp CCATTTCGGGAACATGGAAATTCTTCCTTCTGGCACATGGTACAATaGGTTTCATCCCTTCCATTTGGGCAATGCCAATACCCATCACAA +
Preference number: 6 (lower is better)
Translates to: PFREHGNSSFWHMVQ*VSSLPFGQCQYPSQ
Trigger: TTGTGATGGGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTTCCCGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS TCA 72 bp GTCATCCGAATGAAACCTAATCCAGATGTGGTCTTGTaGAGAGATATACGGAGGTGGAATTGTGGAACCACA +
Preference number: 6 (lower is better)
Translates to: VIRMKPNPDVVL*RDIRRWNCGTT
Trigger: TGTGGTTCCACAATTCCACCTCCGTATATCTCTTCACAAGACCACATCTGGATTAGGTTTCATTCGGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS TCA 72 bp TGCATTATATGGTTGTCTAAGCCCTTGTCCTTGATCTaGGGCAAGATCAAGAAGAGGTCTGGAGCAGTCATT +
Preference number: 6 (lower is better)
Translates to: CIIWLSKPLSLI*GKIKKRSGAVI
Trigger: AATGACTGCTCCAGACCTCTTCTTGATCTTGCCTCAGATCAAGGACAAGGGCTTAGACAACCATATAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS TCA 72 bp TTTGTTGCATTATATGGTTGTCTAAGCCCTTGTCCTTaGTCTGAGGCAAGATCAAGAAGAGGTCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: FVALYGCLSPCP*SEARSRRGLEQ
Trigger: CTGCTCCAGACCTCTTCTTGATCTTGCCTCAGATCAAGGACAAGGGCTTAGACAACCATATAATGCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS GCA 72 bp TACGGTGATCACCAGTGTCTATTAACCAGGTGCAATTaGTTCCAGGAGGATAAAAGTCTGGATAATTGGGAG +
Preference number: 6 (lower is better)
Translates to: YGDHQCLLTRCN*FQEDKSLDNWE
Trigger: CTCCCAATTATCCAGACTTTTATCCTCCTGGAAGCAATTGCACCTGGTTAATAGACACTGGTGATCACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS GCA 72 bp TTTCATCTGAGCCATTTGGGCAATGATTCTGGTAGTTaGAGCGATCAGAACGAGGATAACAGACACCATTTC +
Preference number: 6 (lower is better)
Translates to: FHLSHLGNDSGS*SDQNEDNRHHF
Trigger: GAAATGGTGTCTGTTATCCTCGTTCTGATCGCTGCAACTACCAGAATCATTGCCCAAATGGCTCAGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS GCA 72 bp TGCATTCTACCACTCAATCAGGCAAGAGAAAAACACTaGATGGAGGAGGAGAACAACAGCTTTTGTATGTGC +
Preference number: 6 (lower is better)
Translates to: CILPLNQAREKH*MEEENNSFCMC
Trigger: GCACATACAAAAGCTGTTGTTCTCCTCCTCCATGCAGTGTTTTTCTCTTGCCTGATTGAGTGGTAGAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CCA 72 bp GTTGAAAAGCAGCAGCAGTTGGAGGATTTGCTTCTTTaGCACAGATCTCTTCATCGGAACTATCTCCACATT +
Preference number: 6 (lower is better)
Translates to: VEKQQQLEDLLL*HRSLHRNYLHI
Trigger: AATGTGGAGATAGTTCCGATGAAGAGATCTGTGCCAAAGAAGCAAATCCTCCAACTGCTGCTGCTTTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 72 bp ACAGGGTATTTCCCATGGCAAACAGAACCCATCTACTaGGTAAGTAGCATTAAATCCCCTTGCAGCATTCAC +
Preference number: 6 (lower is better)
Translates to: TGYFPWQTEPIY*VSSIKSPCSIH
Trigger: GTGAATGCTGCAAGGGGATTTAATGCTACTTACCAAGTAGATGGGTTCTGTTTGCCATGGGAAATACCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CCA 72 bp AACATGGAAATTCTTCCTTCTGGCACATGGTACAATTaGTTTCATCCCTTCCATTTGGGCAATGCCAATACC +
Preference number: 6 (lower is better)
Translates to: NMEILPSGTWYN*FHPFHLGNANT
Trigger: GGTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CCA 72 bp CAGACACCATTTCGGGAACATGGAAATTCTTCCTTCTaGCACATGGTACAATTGGTTTCATCCCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: QTPFREHGNSSF*HMVQLVSSLPF
Trigger: AAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTTCCCGAAATGGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CCA 72 bp ATCAGAACGAGGATAACAGACACCATTTCGGGAACATaGAAATTCTTCCTTCTGGCACATGGTACAATTGGT +
Preference number: 6 (lower is better)
Translates to: IRTRITDTISGT*KFFLLAHGTIG
Trigger: ACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTTCCCGAAATGGTGTCTGTTATCCTCGTTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS CAA 72 bp GAACATGGAAATTCTTCCTTCTGGCACATGGTACAATaGGTTTCATCCCTTCCATTTGGGCAATGCCAATAC +
Preference number: 6 (lower is better)
Translates to: EHGNSSFWHMVQ*VSSLPFGQCQY
Trigger: GTATTGGCATTGCCCAAATGGAAGGGATGAAACCAATTGTACCATGTGCCAGAAGGAAGAATTTCCATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS TCA 72 bp GCTTCTGGTATACACTTTCCATTACCACAACGAAACTaGTCACAAGCACAATTTGGTTCCTCAGATTTCCCT +
Preference number: 6 (lower is better)
Translates to: ASGIHFPLPQRN*SQAQFGSSDFP
Trigger: AGGGAAATCTGAGGAACCAAATTGTGCTTGTGATCAGTTTCGTTGTGGTAATGGAAAGTGTATACCAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS GCA 72 bp CCTTATCTGTCCAGAAGAAGAAACAACTGTAAGAGGTaGATGAGAATCAAAAGCTGTCAACACACGCAAAAG +
Preference number: 6 (lower is better)
Translates to: PYLSRRRNNCKR*MRIKSCQHTQK
Trigger: CTTTTGCGTGTGTTGACAGCTTTTGATTCTCATGCACCTCTTACAGTTGTTTCTTCTTCTGGACAGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000523007.1
CDS GCA 72 bp AAAAATCTCCCACTGCAACTGTGGATTGGTCAAATTTaGCGGGCAATTCTCCACATTTTGCTTTGCATGTAT +
Preference number: 6 (lower is better)
Translates to: KNLPLQLWIGQI*RAILHILLCMY
Trigger: ATACATGCAAAGCAAAATGTGGAGAATTGCCCGGCAAATTTGACCAATCCACAGTTGCAGTGGGAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CAA 72 bp CGTGATCTTGCAAAATTAAAAATACGGTTCCAAATGTaGCTTGATCTGCCTGCCATAGGAAGCCTGACTGAA +
Preference number: 6 (lower is better)
Translates to: RDLAKLKIRFQM*LDLPAIGSLTE
Trigger: TTCAGTCAGGCTTCCTATGGCAGGCAGATCAAGCAACATTTGGAACCGTATTTTTAATTTTGCAAGATCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CAA 90 bp AAATTCTATGCCTCCTACCCATACAATGTTACACATGAAAACATGTaGAAGGTGCCTTTGTGCTACACTGTCTCTGTGATGGAAATGACA +
Preference number: 6 (lower is better)
Translates to: KFYASYPYNVTHENM*KVPLCYTVSVMEMT
Trigger: TGTCATTTCCATCACAGAGACAGTGTAGCACAAAGGCACCTTCAACATGTTTTCATGTGTAACATTGTATGGGTAGGAGGCATAGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS TCA 72 bp AGTCTGAAACCCTTTCTAGAGATGTTGTCATCCGAATaGAACCTAATCCAGATGTGGTCTTGTGAAGAGATA +
Preference number: 6 (lower is better)
Translates to: SLKPFLEMLSSE*NLIQMWSCEEI
Trigger: TATCTCTTCACAAGACCACATCTGGATTAGGTTTCATTCGGATGACAACATCTCTAGAAAGGGTTTCAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS TCA 72 bp TCAGAGTATTACAGATCCTTTCATGGAGTCAGCAGGTaGCATAGTTATTCATGTTTGTTAGGTTATGCCCTC +
Preference number: 6 (lower is better)
Translates to: SEYYRSFHGVSR*HSYSCLLGYAL
Trigger: GAGGGCATAACCTAACAAACATGAATAACTATGTCACCTGCTGACTCCATGAAAGGATCTGTAATACTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS TCA 72 bp CCCTACTTGGGTCTACATTCCAGAACAAGTCTTAAATaGTGGTTCAGAGTATTACAGATCCTTTCATGGAGT +
Preference number: 6 (lower is better)
Translates to: PYLGLHSRTSLK*WFRVLQILSWS
Trigger: ACTCCATGAAAGGATCTGTAATACTCTGAACCATCATTTAAGACTTGTTCTGGAATGTAGACCCAAGTAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CCA 72 bp TGTGGTCTTGTGAAGAGATATACGGAGGTGGAATTGTaGAACCACAAGCTCTGTAACTTTCAATATTCTTGT +
Preference number: 6 (lower is better)
Translates to: CGLVKRYTEVEL*NHKLCNFQYSC
Trigger: ACAAGAATATTGAAAGTTACAGAGCTTGTGGTTCCACAATTCCACCTCCGTATATCTCTTCACAAGACCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 90 bp TCCTACCCATACAATGTTACACATGAAAACATGTTGAAGGTGCCTTaGTGCTACACTGTCTCTGTGATGGAAATGACATTCTTATTTGTG +
Preference number: 6 (lower is better)
Translates to: SYPYNVTHENMLKVP*CYTVSVMEMTFLFV
Trigger: CACAAATAAGAATGTCATTTCCATCACAGAGACAGTGTAGCACAAAGGCACCTTCAACATGTTTTCATGTGTAACATTGTATGGGTAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CAA 90 bp ATAAGTATTAAAGGTGTGTTAAAAATCTCCCACTGCAACTGTGGATaGGTCAAATTTGCCGGGCAATTCTCCACATTTTGCTTTGCATGT +
Preference number: 6 (lower is better)
Translates to: ISIKGVLKISHCNCG*VKFAGQFSTFCFAC
Trigger: ACATGCAAAGCAAAATGTGGAGAATTGCCCGGCAAATTTGACCAATCCACAGTTGCAGTGGGAGATTTTTAACACACCTTTAATACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS TCA 72 bp AGTTTAAAGTCAGTGAAGCGTAAAATGACTTTACGGTaGTCACCAGTGTCTATTAACCAGGTGCAATTGCTT +
Preference number: 6 (lower is better)
Translates to: SLKSVKRKMTLR*SPVSINQVQLL
Trigger: AAGCAATTGCACCTGGTTAATAGACACTGGTGATCACCGTAAAGTCATTTTACGCTTCACTGACTTTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276654.10
ENST00000424843.6
CDS GCA 72 bp AAAAGAAAAGATGCAGTAATGGTTATTACGATACTGTaGATCTGTGTGCCACCTATTAGCCATCTGTTACGT +
Preference number: 6 (lower is better)
Translates to: KRKDAVMVITIL*ICVPPISHLLR
Trigger: ACGTAACAGATGGCTAATAGGTGGCACACAGATGCACAGTATCGTAATAACCATTACTGCATCTTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518375.1
CDS CCA 72 bp TCCACATTCATCCATGTTATTACATTTCCAGGCTTCTaGTATACACTTTCCATTACCACAACGAAACTGATC +
Preference number: 6 (lower is better)
Translates to: STFIHVITFPGF*YTLSITTTKLI
Trigger: GATCAGTTTCGTTGTGGTAATGGAAAGTGTATACCAGAAGCCTGGAAATGTAATAACATGGATGAATGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 90 bp GTCTGGAGCAGTCATTCACATCAAAGTCTGAAGATCCATCAGAAATaGGAATTAGCATTTCAACATCATCATCATCTTCTCTTCCACTTA +
Preference number: 6 (lower is better)
Translates to: VWSSHSHQSLKIHQK*ELAFQHHHHLLFHL
Trigger: TAAGTGGAAGAGAAGATGATGATGATGTTGAAATGCTAATTCCAATTTCTGATGGATCTTCAGACTTTGATGTGAATGACTGCTCCAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS TCA 72 bp GGATATTGCTCCAACTTGTATACAATCTCCCTTATGTaGTTCGTACCTAACAAAGTAACAAAGCCTCATCAT +
Preference number: 6 (lower is better)
Translates to: GYCSNLYTISLM*FVPNKVTKPHH
Trigger: ATGATGAGGCTTTGTTACTTTGTTAGGTACGAATCACATAAGGGAGATTGTATACAAGTTGGAGCAATATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000518375.1
CDS CCA 72 bp AGAAAGGTAGAATTACCTTATAGTAATGATTTCGCCTaGGTTTGCCCTTATGAACCAGCTACAGTTGATTTT +
Preference number: 6 (lower is better)
Translates to: RKVELPYSNDFA*VCPYEPATVDF
Trigger: AAAATCAACTGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAATCATTACTATAAGGTAATTCTACCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CAA 90 bp GTATGTTTCTATTGTCAACCAGTCCAAATTGCACCTTCTGGATCCTaGAATATCAAAATCCTGAAAACTTATAGTAATGATTTCGCCTGG +
Preference number: 6 (lower is better)
Translates to: VCFYCQPVQIAPSGS*NIKILKTYSNDFAW
Trigger: CCAGGCGAAATCATTACTATAAGTTTTCAGGATTTTGATATTCAAGGATCCAGAAGGTGCAATTTGGACTGGTTGACAATAGAAACATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 90 bp TGGAACCACAAGCTCTGTAACTTTCAATATTCTTGTATGTTTCTATaGTCAACCAGTCCAAATTGCACCTTCTGGATCCTTGAATATCAA +
Preference number: 6 (lower is better)
Translates to: WNHKLCNFQYSCMFL*STSPNCTFWILEYQ
Trigger: TTGATATTCAAGGATCCAGAAGGTGCAATTTGGACTGGTTGACAATAGAAACATACAAGAATATTGAAAGTTACAGAGCTTGTGGTTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 90 bp AGGTTAAGAGCTAGATATCCAAGTGAATTAATGAGTTTTGTTTATTaGTTTGTTCCACTGCCAAAGGTTAGTCTTGACCCTAATAGGCTA +
Preference number: 6 (lower is better)
Translates to: RLRARYPSELMSFVY*FVPLPKVSLDPNRL
Trigger: TAGCCTATTAGGGTCAAGACTAACCTTTGGCAGTGGAACAAACAAATAAACAAAACTCATTAATTCACTTGGATATCTAGCTCTTAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS CCA 72 bp ATCAAAATCCTGAAAACTTATAGTAATGATTTCGCCTaGGTTTGCCCTTATGAACCAGCTACAGTTGATTTT +
Preference number: 6 (lower is better)
Translates to: IKILKTYSNDFA*VCPYEPATVDF
Trigger: AAAATCAACTGTAGCTGGTTCATAAGGGCAAACCCAGGCGAAATCATTACTATAAGTTTTCAGGATTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1
CDS CAA 72 bp TGTCTCTGTGATGGAAATGACATTCTTATTTGTGTTTaGTTCCAACTGCAGTTCTTCATTCGGGCTATTTTT +
Preference number: 6 (lower is better)
Translates to: CLCDGNDILICV*FQLQFFIRAIF
Trigger: AAAAATAGCCCGAATGAAGAACTGCAGTTGGAACAAAACACAAATAAGAATGTCATTTCCATCACAGAGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519675.1
CDS GCA 72 bp TATTCTTGTATGTTTCTATTGTCAACCAGTCCAAATTaGACCTTCTGGATCCTTGAATATCAAAATCCTGAA +
Preference number: 6 (lower is better)
Translates to: YSCMFLLSTSPN*TFWILEYQNPE
Trigger: TTCAGGATTTTGATATTCAAGGATCCAGAAGGTGCAATTTGGACTGGTTGACAATAGAAACATACAAGAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276654.10
ENST00000424843.6
ENST00000520770.1