RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRP11 (Homo sapiens)

Ensembl gene IDs: ENSG00000120256

Ensembl transcript IDs: ENST00000239367.7, ENST00000367368.3, ENST00000463728.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACCCAGGGGGAAAGCCCTCTAGAGGGCGCCCAGATCTACAGAAGTaGGCCATCCCTGCTGGAGACAATGTCATGTCTCCACTGGTCCTG +
Preference number: 1 (lower is better)
Translates to: YPGGKPSRGRPDLQK*AIPAGDNVMSPLVL
Trigger: CAGGACCAGTGGAGACATGACATTGTCTCCAGCAGGGATGGCTCACTTCTGTAGATCTGGGCGCCCTCTAGAGGGCTTTCCCCCTGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 90 bp CAGTGCTGGCACGGGCTGGAGTTTGGTGCCTGTCCTGTCTGTGAATaGTTACCCTGCTTCCTTACAGTAAGCTTAACCCCTGGCTGGACA +
Preference number: 1 (lower is better)
Translates to: QCWHGLEFGACPVCE*LPCFLTVSLTPGWT
Trigger: TGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAACCATTCACAGACAGGACAGGCACCAAACTCCAGCCCGTGCCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 90 bp CCATGCTGTGCAACAGATCACCAGAACCTGTTCCTCCGGTCTCAGTaGCACTTTGTACCCTTTGACCAGCGTCTCTCCTTTCCCAGTCCG +
Preference number: 1 (lower is better)
Translates to: PCCATDHQNLFLRSQ*HFVPFDQRLSFPSP
Trigger: CGGACTGGGAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTCACTGAGACCGGAGGAACAGGTTCTGGTGATCTGTTGCACAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 90 bp GCTGGACAGACTGTTTACTCGCTATCACTGGTGACCTCACAGTGCTaGCACGGGCTGGAGTTTGGTGCCTGTCCTGTCTGTGAATGGTTA +
Preference number: 1 (lower is better)
Translates to: AGQTVYSLSLVTSQC*HGLEFGACPVCEWL
Trigger: TAACCATTCACAGACAGGACAGGCACCAAACTCCAGCCCGTGCCAGCACTGTGAGGTCACCAGTGATAGCGAGTAAACAGTCTGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 90 bp CACGGGCTGGAGTTTGGTGCCTGTCCTGTCTGTGAATGGTTACCCTaGTTCCTTACAGTAAGCTTAACCCCTGGCTGGACAGGTTGTCAT +
Preference number: 1 (lower is better)
Translates to: HGLEFGACPVCEWLP*FLTVSLTPGWTGCH
Trigger: ATGACAACCTGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAACCATTCACAGACAGGACAGGCACCAAACTCCAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 90 bp GGACTCAACAATGTTTTGAGTAGCTGGCTGGCTCTCCTGTCCAGCTaGAATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACA +
Preference number: 1 (lower is better)
Translates to: GLNNVLSSWLALLSS*NELAGLMESGLSWT
Trigger: TGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATTGCAGCTGGACAGGAGAGCCAGCCAGCTACTCAAAACATTGTTGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 90 bp TACCAGAGTCAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTaGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATG +
Preference number: 1 (lower is better)
Translates to: YQSQGPPVHHSIPSA*QGPCTLHTLRKYTM
Trigger: CATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTGACTCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 90 bp TCCAGCTGCAATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTaGACAGACTGTTTACTCGCTATCACTGGTGACCTCACAGTGCTG +
Preference number: 1 (lower is better)
Translates to: SSCNELAGLMESGLS*TDCLLAITGDLTVL
Trigger: CAGCACTGTGAGGTCACCAGTGATAGCGAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATTGCAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 90 bp AGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCTATCCCCAGTaGCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACAC +
Preference number: 1 (lower is better)
Translates to: SLPESGTTSAPLYPQ*LARTLHTAYTKKIH
Trigger: GTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 90 bp TCCACTGGTCCTGGTGGCCAAGGGACCAATGATGTTTTGAGTAGCTaGCCAGCAAAGGGACTCAACAATGTTTTGAGTAGCTGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: STGPGGQGTNDVLSS*PAKGLNNVLSSWLA
Trigger: AGCCAGCCAGCTACTCAAAACATTGTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCCCTTGGCCACCAGGACCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 90 bp TGTGAATGGTTACCCTGCTTCCTTACAGTAAGCTTAACCCCTGGCTaGACAGGTTGTCATCAGCCAAACAAATTTTTAATGCCGCCTATG +
Preference number: 1 (lower is better)
Translates to: CEWLPCFLTVSLTPG*TGCHQPNKFLMPPM
Trigger: CATAGGCGGCATTAAAAATTTGTTTGGCTGATGACAACCTGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAACCATTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 90 bp TTTGAAACAGACAATACATTATCATTAACTATAGTCACCATGCTGTaGAACAGATCACCAGAACCTGTTCCTCCGGTCTCAGTGACACTT +
Preference number: 1 (lower is better)
Translates to: FETDNTLSLTIVTML*NRSPEPVPPVSVTL
Trigger: AAGTGTCACTGAGACCGGAGGAACAGGTTCTGGTGATCTGTTGCACAGCATGGTGACTATAGTTAATGATAATGTATTGTCTGTTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 90 bp AAGTTTCTGTTAGTTTTTGGCATGCCAGATTCTCTGCTTCCATCTTaGTTTCCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAAT +
Preference number: 1 (lower is better)
Translates to: KFLLVFGMPDSLLPS*FPISLHDHLRAVTN
Trigger: ATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGGAAATCAAGATGGAAGCAGAGAATCTGGCATGCCAAAAACTAACAGAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR TCA 90 bp TATATAAATGAGTTGCTGTGCTCTCACCATGGAGCAGTGTTGATTTaGTGTAATGAAGTATTAAACGTTCTCCTTGCTCTCTTTGCCTTC +
Preference number: 1 (lower is better)
Translates to: YINELLCSHHGAVLI*CNEVLNVLLALFAF
Trigger: GAAGGCAAAGAGAGCAAGGAGAACGTTTAATACTTCATTACATCAAATCAACACTGCTCCATGGTGAGAGCACAGCAACTCATTTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR TCA 90 bp CACTCTGCTGGCTTAATTACCATCTGGATCCTGAGTATTGAATACTaGGAATTCAAAAATGTCACAGACTTACTGCAAGTTTACCAGAGT +
Preference number: 1 (lower is better)
Translates to: HSAGLITIWILSIEY*EFKNVTDLLQVYQS
Trigger: ACTCTGGTAAACTTGCAGTAAGTCTGTGACATTTTTGAATTCTCAGTATTCAATACTCAGGATCCAGATGGTAATTAAGCCAGCAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCGCACCTCTCCAGAAGTaGATTGTGTGTGTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCAPLQK*IVCVVR
Trigger: CCTCACCACACACACAATTCACTTCTGGAGAGGTGC...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 90 bp GTGCAACAGATCACCAGAACCTGTTCCTCCGGTCTCAGTGACACTTaGTACCCTTTGACCAGCGTCTCTCCTTTCCCAGTCCGTCCCCCG +
Preference number: 2 (lower is better)
Translates to: VQQITRTCSSGLSDT*YPLTSVSPFPVRPP
Trigger: CGGGGGACGGACTGGGAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTCACTGAGACCGGAGGAACAGGTTCTGGTGATCTGTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAGAATTGTGTGTGTGGTaGGGGGTTCCCTCTACAATA +
Preference number: 2 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTELCVW*GVPSTI
Trigger: TATTGTAGAGGGAACCCCTCACCACACACACAATTC...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCGGCGGGTGGATCACCTaGGGTCAGGAATTCGAGACC +
Preference number: 2 (lower is better)
Translates to: CHRLTASLPESGTTSAPLGGWIT*GQEFET
Trigger: GGTCTCGAATTCCTGACCTCAGGTGATCCACCCGCC...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCGGCAGGAGAATCACTTaGACCCAGGAGGCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: CHRLTASLPESGTTSAPLGRRIT*TQEAEA
Trigger: AGCCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCC...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR GCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCGCAGTGAGCCGAGACTaGACCACTGCACTCCCACTC +
Preference number: 2 (lower is better)
Translates to: NELAGLMESGLSWTDCLLAVSRD*TTALPL
Trigger: GAGTGGGAGTGCAGTGGTGCAGTCTCGGCTCACTGC...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCAGTGCTGGCACGGGCTaGAGTTTGGTGCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: NELAGLMESGLSWTDCLLSAGTG*SLVPVL
Trigger: CAGGACAGGCACCAAACTCCAGCCCGTGCCAGCACT...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACATTACATCAAGCTAACTaGCATATCTATCATCTCCCC +
Preference number: 2 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTLHQAN*HIYHLP
Trigger: GGGGAGATGATAGATATGTCAGTTAGCTTGATGTAA...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCGTAGCACTTTCAAATTaGTGGGTCCTTTGCGTATTT +
Preference number: 2 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCVALSN*WVLCVF
Trigger: AAATACGCAAAGGACCCATCAATTTGAAAGTGCTAC...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCTATTATATCAGCAATTaGTTACACCCAAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCYYISN*LHPRAK
Trigger: CTTGGCTCTTGGGTGTAATCAATTGCTGATATAATA...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGATGTCATGTCTCCACTaGTCCTGGTGGCCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVMSCLH*SWWPRD
Trigger: GTCCCTTGGCCACCAGGACCAGTGGAGACATGACAT...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 90 bp TGTCATGTCTCCACTGGTCCTGGTGGCCAAGGGACCAATGATGTTTaGAGTAGCTGCCCAGCAAAGGGACTCAACAATGTTTTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: CHVSTGPGGQGTNDV*SSCPAKGLNNVLSS
Trigger: GCTACTCAAAACATTGTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCCCTTGGCCACCAGGACCAGTGGAGACATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGGACCAATGATGTTTTaGGTAGCTGCCCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVGPMMF*VAAQQR
Trigger: CCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR GCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGAAGTGAGCCATCCCTaGTGGAGACAATGTCATGTC +
Preference number: 2 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVEVSHP*WRQCHV
Trigger: GACATGACATTGTCTCCAGCAGGGATGGCTCACTTC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAAAAATTAGCAGGGCGTaGTGGTGCACACCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRKISRA*WCTPVV
Trigger: GACTACAGGTGTGCACCACCACGCCCTGCTAATTTT...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR GCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGATGTTTTGAGTAGCTaGCCAGCAAAGGGACTCAAC +
Preference number: 2 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVDVLSS*PAKGLN
Trigger: GTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAAGGCAGAGGCTGCAGTaGGCCGAGACTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIRQRLQ*AETAPL
Trigger: CAGTGGTGCAGTCTCGGCTCACTGCAGCCTCTGCCT...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR GCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGATAGTCACCATGCTGTaGAACAGATCACCAGAACCT +
Preference number: 2 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVIVTML*NRSPEP
Trigger: AGGTTCTGGTGATCTGTTGCACAGCATGGTGACTAT...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 90 bp AATGATGTTTTGAGTAGCTGCCCAGCAAAGGGACTCAACAATGTTTaGAGTAGCTGGCTGGCTCTCCTGTCCAGCTGCAATGAATTAGCA +
Preference number: 2 (lower is better)
Translates to: NDVLSSCPAKGLNNV*SSWLALLSSCNELA
Trigger: TGCTAATTCATTGCAGCTGGACAGGAGAGCCAGCCAGCTACTCAAAACATTGTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTAGAACAAGGGGAAGCTaGGCCTATAGCAGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVRTRGS*AYSSPA
Trigger: TGCTGGACTGCTATAGGCCCAGCTTCCCCTTGTTCT...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTAGGCAGCCACCTATATaGCATGACGTCAGAGGGATT +
Preference number: 2 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVRQPPI*HDVRGI
Trigger: AATCCCTCTGACGTCATGTCATATAGGTGGCTGCCT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR GCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAACCGTACTCCTTAGCTaGACTCTTTTTCTCTTTCTA +
Preference number: 2 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRTVLLS*TLFLFL
Trigger: TAGAAAGAGAAAAAGAGTGCAGCTAAGGAGTACGGT...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCACCTCCTGAGATGCTaGATTTTCTCTCAGCTAAGT +
Preference number: 2 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSHLLRC*IFSQLS
Trigger: ACTTAGCTGAGAGAAAATTCAGCATCTCAGGAGGTG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCAGGCATGAACTTGCTTaGGATCCACTCTCAGAAACA +
Preference number: 2 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSRHELA*DPLSET
Trigger: TGTTTCTGAGAGTGGATCTCAAGCAAGTTCATGCCT...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR TCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGTTACCATCTGGATCCTaGGTATTGAATACTGAGAAT +
Preference number: 2 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVLPSGS*VLNTEN
Trigger: ATTCTCAGTATTCAATACTCAGGATCCAGATGGTAA...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAGCTGTGCTCTCACCATaGAGCAGTGTTGATTTGATG +
Preference number: 2 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTAVLSP*SSVDLM
Trigger: CATCAAATCAACACTGCTCCATGGTGAGAGCACAGC...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR GCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACATAAATGAGTTGCTGTaGTCTCACCATGGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHINELL*SHHGAV
Trigger: CACTGCTCCATGGTGAGAGCACAGCAACTCATTTAT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR TCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACTCTCTGCTTCCATCTTaGTTTCCTATCTCACTGCAT +
Preference number: 2 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHSLLPS*FPISLH
Trigger: ATGCAGTGAGATAGGAAATCAAGATGGAAGCAGAGA...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCTCTCCTTGCTCTCTTTaGCTTCAACTAAGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSSPCSL*LQLSFC
Trigger: ACAGAAACTTAGTTGAAGGCAAAGAGAGCAAGGAGA...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCTTCCCTAAGGCTTACTaGCTTGTACATAAGGTTTAT +
Preference number: 2 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSFPKAY*LVHKVY
Trigger: ATAAACCTTATGTACAAGTCAGTAAGCCTTAGGGAA...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR CCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGTTTCTGTTAGTTTTTaGCATGCCAGATTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVVSVSF*HARFSA
Trigger: AGCAGAGAATCTGGCATGCCAAAAACTAACAGAAAC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR GCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACAACAAAACATGTCCCTaGCCCAAGGTATTGAAATTA +
Preference number: 2 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHNKTCP*PKVLKL
Trigger: TAATTTCAATACCTTGGGGCAGGGACATGTTTTGTT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR GCA 72 bp CAGGACAAACAAGTGGCCGGTGAGGTGCTGGCCATCTaGTCATATCAGTGCAGGCCCTTCCTCCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: QDKQVAGEVLAI*SYQCRPFLPPR
Trigger: CCTGGGAGGGAGGAAGGGCCTGCACTGATATGAGCAGATGGCCAGCACCTCACCGGCCACTTGTTTGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 72 bp CCTGTTCCTCCGGTCTCAGTGACACTTTGTACCCTTTaGCCAGCGTCTCTCCTTTCCCAGTCCGTCCCCCGC +
Preference number: 3 (lower is better)
Translates to: PVPPVSVTLCTL*PASLLSQSVPR
Trigger: GCGGGGGACGGACTGGGAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTCACTGAGACCGGAGGAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CAA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAGACACTTTGTACCCTTaGACCAGCGTCTCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTDTLYP*TSVSPF
Trigger: GAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTC...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp GAGTCAGGGACCACCAGTGCACCACTCTATCCCCAGTaGCTGGCAAGGACCCTGCACACTGCATACACTAAG +
Preference number: 3 (lower is better)
Translates to: ESGTTSAPLYPQ*LARTLHTAYTK
Trigger: CTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 72 bp AGGGCGCCCAGATCTACAGAAGTGAGCCATCCCTGCTaGAGACAATGTCATGTCTCCACTGGTCCTGGTGGC +
Preference number: 3 (lower is better)
Translates to: RAPRSTEVSHPC*RQCHVSTGPGG
Trigger: GCCACCAGGACCAGTGGAGACATGACATTGTCTCCAGCAGGGATGGCTCACTTCTGTAGATCTGGGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp CAGACTGTTTACTCGCTATCACTGGTGACCTCACAGTaGTGGCACGGGCTGGAGTTTGGTGCCTGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: QTVYSLSLVTSQ*WHGLEFGACPV
Trigger: GACAGGACAGGCACCAAACTCCAGCCCGTGCCAGCACTGTGAGGTCACCAGTGATAGCGAGTAAACAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 72 bp GGAAAGCCCTCTAGAGGGCGCCCAGATCTACAGAAGTaGGCCATCCCTGCTGGAGACAATGTCATGTCTCCA +
Preference number: 3 (lower is better)
Translates to: GKPSRGRPDLQK*AIPAGDNVMSP
Trigger: TGGAGACATGACATTGTCTCCAGCAGGGATGGCTCACTTCTGTAGATCTGGGCGCCCTCTAGAGGGCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp ACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTaGACCACTCTATCCCCAGTGCCTGGCAAGGACCCT +
Preference number: 3 (lower is better)
Translates to: TYCKFTRVRDHQ*TTLSPVPGKDP
Trigger: AGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 72 bp ACTGTTTACTCGCTATCACTGGTGACCTCACAGTGCTaGCACGGGCTGGAGTTTGGTGCCTGTCCTGTCTGT +
Preference number: 3 (lower is better)
Translates to: TVYSLSLVTSQC*HGLEFGACPVC
Trigger: ACAGACAGGACAGGCACCAAACTCCAGCCCGTGCCAGCACTGTGAGGTCACCAGTGATAGCGAGTAAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 72 bp CTCCCAAAGGTCAGTCTAAGGAGGCAGCCACCTATATaGCATGACGTCAGAGGGATTAGGAAGGACCCACAC +
Preference number: 3 (lower is better)
Translates to: LPKVSLRRQPPI*HDVRGIRKDPH
Trigger: GTGTGGGTCCTTCCTAATCCCTCTGACGTCATGTCATATAGGTGGCTGCCTCCTTAGACTGACCTTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR GCA 72 bp GTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTaGACACTGCATACACTAAGAAAATACACGATGACC +
Preference number: 3 (lower is better)
Translates to: VHHSIPSAWQGP*TLHTLRKYTMT
Trigger: GGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp AATGTTTTGAGTAGCTGGCTGGCTCTCCTGTCCAGCTaGAATGAATTAGCAGGGCTGATGGAATCCGGGCTG +
Preference number: 3 (lower is better)
Translates to: NVLSSWLALLSS*NELAGLMESGL
Trigger: CAGCCCGGATTCCATCAGCCCTGCTAATTCATTGCAGCTGGACAGGAGAGCCAGCCAGCTACTCAAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 72 bp CACGGGCTGGAGTTTGGTGCCTGTCCTGTCTGTGAATaGTTACCCTGCTTCCTTACAGTAAGCTTAACCCCT +
Preference number: 3 (lower is better)
Translates to: HGLEFGACPVCE*LPCFLTVSLTP
Trigger: AGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAACCATTCACAGACAGGACAGGCACCAAACTCCAGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 72 bp GCAACAGATCACCAGAACCTGTTCCTCCGGTCTCAGTaGCACTTTGTACCCTTTGACCAGCGTCTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: ATDHQNLFLRSQ*HFVPFDQRLSF
Trigger: AAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTCACTGAGACCGGAGGAACAGGTTCTGGTGATCTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR TCA 72 bp CCACTGGTCCTGGTGGCCAAGGGACCAATGATGTTTTaGGTAGCTGCCCAGCAAAGGGACTCAACAATGTTT +
Preference number: 3 (lower is better)
Translates to: PLVLVAKGPMMF*VAAQQRDSTMF
Trigger: AAACATTGTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCCCTTGGCCACCAGGACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp GAGTTTGGTGCCTGTCCTGTCTGTGAATGGTTACCCTaGTTCCTTACAGTAAGCTTAACCCCTGGCTGGACA +
Preference number: 3 (lower is better)
Translates to: EFGACPVCEWLP*FLTVSLTPGWT
Trigger: TGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAACCATTCACAGACAGGACAGGCACCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 72 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTaGACAGACTGTTTACTCGCTATCACTGGTGACCTC +
Preference number: 3 (lower is better)
Translates to: NELAGLMESGLS*TDCLLAITGDL
Trigger: GAGGTCACCAGTGATAGCGAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp CCTGGTGGCCAAGGGACCAATGATGTTTTGAGTAGCTaGCCAGCAAAGGGACTCAACAATGTTTTGAGTAGC +
Preference number: 3 (lower is better)
Translates to: PGGQGTNDVLSS*PAKGLNNVLSS
Trigger: GCTACTCAAAACATTGTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCCCTTGGCCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CAA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGGTAGCACTTTCAAATaGATGGGTCCTTTGCGTATT +
Preference number: 3 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRGSTFK*MGPLRI
Trigger: AATACGCAAAGGACCCATCAATTTGAAAGTGCTACC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 72 bp ATGGTTACCCTGCTTCCTTACAGTAAGCTTAACCCCTaGCTGGACAGGTTGTCATCAGCCAAACAAATTTTT +
Preference number: 3 (lower is better)
Translates to: MVTLLPYSKLNP*LDRLSSAKQIF
Trigger: AAAAATTTGTTTGGCTGATGACAACCTGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CAA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAATTGAAGGCATGAACTaGCTTGAGATCCACTCTCAG +
Preference number: 3 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTIEGMN*LEIHSQ
Trigger: CTGAGAGTGGATCTCAAGCAAGTTCATGCCTTCAAT...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR CAA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCTTCTCTGCTTCCATCTaGATTTCCTATCTCACTGCA +
Preference number: 3 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSFSASI*ISYLTA
Trigger: TGCAGTGAGATAGGAAATCAAGATGGAAGCAGAGAA...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR GCA 72 bp GACAATACATTATCATTAACTATAGTCACCATGCTGTaGAACAGATCACCAGAACCTGTTCCTCCGGTCTCA +
Preference number: 3 (lower is better)
Translates to: DNTLSLTIVTML*NRSPEPVPPVS
Trigger: TGAGACCGGAGGAACAGGTTCTGGTGATCTGTTGCACAGCATGGTGACTATAGTTAATGATAATGTATTGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR GCA 72 bp TTGAATACTGAGAATTCAAAAATGTCACAGACTTACTaGAAGTTTACCAGAGTCAGGGACCACCAGTGCACC +
Preference number: 3 (lower is better)
Translates to: LNTENSKMSQTY*KFTRVRDHQCT
Trigger: GGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACATTTTTGAATTCTCAGTATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CCA 72 bp TTACCCTGCTTCCTTACAGTAAGCTTAACCCCTGGCTaGACAGGTTGTCATCAGCCAAACAAATTTTTAATG +
Preference number: 3 (lower is better)
Translates to: LPCFLTVSLTPG*TGCHQPNKFLM
Trigger: CATTAAAAATTTGTTTGGCTGATGACAACCTGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAGCAGGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR-3UTR CAA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACAGAAAGATTTGGGATTaGCAGAATCTTCTGGCCCAA +
Preference number: 3 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHRKIWD*QNLLAQ
Trigger: TTGGGCCAGAAGATTCTGCAAATCCCAAATCTTTCT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR-3UTR CAA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACTTCTCCTTGCTCTCTTaGCCTTCAACTAAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHFSLLS*PSTKFL
Trigger: CAGAAACTTAGTTGAAGGCAAAGAGAGCAAGGAGAA...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
3UTR TCA 72 bp TTAGTTTTTGGCATGCCAGATTCTCTGCTTCCATCTTaGTTTCCTATCTCACTGCATGACCATCTTAGAGCT +
Preference number: 3 (lower is better)
Translates to: LVFGMPDSLLPS*FPISLHDHLRA
Trigger: AGCTCTAAGATGGTCATGCAGTGAGATAGGAAATCAAGATGGAAGCAGAGAATCTGGCATGCCAAAAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAGCGCCCGCAGGAAGCTaGCACCCGCCGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTAPAGS*HPPPGS
Trigger: ACTCCCTGGCGGCGGGTGCCAGCTTCCTGCGGGCGC...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCCCCGACAGCTGCGCGTaGAGTTCGGACAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCPDSCA*SSDSGA
Trigger: GGCGCCGCTGTCCGAACTGCACGCGCAGCTGTCGGG...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCCAGACCCTGTCCAGGTaGGTCCCGGTACCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCQTLSR*VPVPRG
Trigger: CCCCCTGGGTACCGGGACTCACCTGGACAGGGTCTG...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCCGCGCGCCGTGCAGTTaGAGAGGTAGCAGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCRAPCS*RGSSRA
Trigger: TGCTCGGCTGCTACCTCTTCAACTGCACGGCGCGCG...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCTCCACGCCCGACAGCTaGGCGTGCAGTTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCSTPDS*ACSSDS
Trigger: GCTGTCCGAACTGCACGCGCAGCTGTCGGGCGTGGA...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCAGTCCTTGGTGCGGATaGTGGCGTCAGGCATTGCGC +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCSPWCG*WRQALR
Trigger: GCGCAATGCCTGACGCCATCATCCGCACCAAGGACT...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAACTCGCTATCACTGGTaGCCTCACAGTGCTGGCACG +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTTRYHW*PHSAGT
Trigger: CGTGCCAGCACTGTGAGGTCACCAGTGATAGCGAGT...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACCGTCTGTGGGCAGATaGAGAACCACATCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTPSVGR*RTTSCP
Trigger: TGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGG...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACATGGCGTGGTCATCTGTaGTCTCGCGGCCGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTWRGHL*SRGRLE
Trigger: TTCTAGACGGCCGCGAGAGCACAGATGACCACGCCA...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACCAGATCTACAGAAGTaGGCCATCCCTGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTPDLQK*AIPAGD
Trigger: GTCTCCAGCAGGGATGGCTCACTTCTGTAGATCTGG...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGAGCCCGCGCTCTCCTaGGCGACGGAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVEPALS*ATEAMA
Trigger: CGCCATGGCCTCCGTCGCCCAGGAGAGCGCGGGCTC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCATGTCATGTCTCCACTaGTCCTGGTGGCCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCMSCLH*SWWPRD
Trigger: GTCCCTTGGCCACCAGGACCAGTGGAGACATGACAT...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGACGTCCGGCGCGCGGCTaGGGCTGTAGCTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRRPARG*GCSCCS
Trigger: GCTACAGCAGCTACAGCCTCAGCCGCGCGCCGGACG...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAGCCTGGCAAGGACCCTaGACACTGCATACACTAAGA +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTAWQGP*TLHTLR
Trigger: TCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGC...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACATTCAGGGTTCCTGATTaGGGCACCTTCATGTCCACT +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTFRVPD*GTFMST
Trigger: AGTGGACATGAAGGTGCCTCAATCAGGAACCCTGAA...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCGATGGCGTCAGGCATTaGGCTGTAGCCGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CHRLTASLPESGTTSAPLDGVRH*AVAAAA
Trigger: GGCAGCGGCGGCTACAGCGCAATGCCTGACGCCATC...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAGAAGTGAGCCATCCCTaGTGGAGACAATGTCATGTC +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTEVSHP*WRQCHV
Trigger: GACATGACATTGTCTCCAGCAGGGATGGCTCACTTC...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 72 bp ACCTGTTCCTCCGGTCTCAGTGACACTTTGTACCCTTaGACCAGCGTCTCTCCTTTCCCAGTCCGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: TCSSGLSDTLYP*TSVSPFPVRPP
Trigger: CGGGGGACGGACTGGGAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTCACTGAGACCGGAGGAACAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGATGTGCAGCGCGAACTTaGAGACGTTGCGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRCAART*RRCGRA
Trigger: CGCGCGGCCGCAACGTCTGCAAGTTCGCGCTGCACA...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCCCCTCTTGGAACAGATaGAGCAAATGGACCATCCAT +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCPSWNR*SKWTIH
Trigger: ATGGATGGTCCATTTGCTGCATCTGTTCCAAGAGGG...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAGATGTTTTGAGTAGCTaGCCAGCAAAGGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTDVLSS*PAKGLN
Trigger: GTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATC...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCCACCTTCATGTCCACTaGCGGGTCCCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLHLHVH*RVPLQQ
Trigger: CTGCTGCAGGGGGACCCGTCAGTGGACATGAAGGTG...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTCCGGGCACCGCTCCTTaGCCTCGCCGGAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVPGTAP*PRRRLP
Trigger: GGGCAGTCTCCGGCGAGGGCAAGGAGCGGTGCCCGG...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGAACTCCTCCAGCAGCTaGTCCACGCCCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVNSSSS*STPDSC
Trigger: GCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTT...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCATAGTCACCATGCTGTaGAACAGATCACCAGAACCT +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCIVTML*NRSPEP
Trigger: AGGTTCTGGTGATCTGTTGCACAGCATGGTGACTAT...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGAGCCCGCGCTCTCCTaGGCGACGGAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVEPALS*ATEAMA
Trigger: CGCCATGGCCTCCGTCGCCCAGGAGAGCGCGGGCTC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAGCGCCCGCAGGAAGCTaGCACCCGCCGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTAPAGS*HPPPGS
Trigger: ACTCCCTGGCGGCGGGTGCCAGCTTCCTGCGGGCGC...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCGTCCGGCGCGCGGCTaGGGCTGTAGCTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVRPARG*GCSCCS
Trigger: GCTACAGCAGCTACAGCCTCAGCCGCGCGCCGGACG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGCAAACAAGTGGCCGGTaGGGTGCTGGCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVQTSGR*GAGHLL
Trigger: GAGCAGATGGCCAGCACCTCACCGGCCACTTGTTTG...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACCCCGACAGCTGCGCGTaGAGTTCGGACAGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHPDSCA*SSDSGA
Trigger: GGCGCCGCTGTCCGAACTGCACGCGCAGCTGTCGGG...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAACTGACGGGTCCCCCTaGAGCAGTGCCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRTDGSP*SSAHSY
Trigger: GTATGAGTGGGCACTGCTGCAGGGGGACCCGTCAGT...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCTTGTCAGAGCTTCTCTaGCCGGCAGTGTCCGTCACG +
Preference number: 4 (lower is better)
Translates to: CHRLTASLPESGTTSAPLLSELL*PAVSVT
Trigger: CGTGACGGACACTGCCGGGCAGAGAAGCTCTGACAA...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGCAGTGAGCCGAGACTaGACCACTGCACTCCCACTC +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRAVSRD*TTALPL
Trigger: GAGTGGGAGTGCAGTGGTGCAGTCTCGGCTCACTGC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAATGTCACAGACTTACTaGAAGTTTACCAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTMSQTY*KFTRVR
Trigger: CCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACAT...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGGCCGCACGGCCGCTTaGCAGCCACAGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVGRTAA*QPQAEQ
Trigger: CTGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCGCGCGCCGTGCAGTTaGAGAGGTAGCAGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSRAPCS*RGSSRA
Trigger: TGCTCGGCTGCTACCTCTTCAACTGCACGGCGCGCG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCTCCACGCCCGACAGCTaGGCGTGCAGTTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSSTPDS*ACSSDS
Trigger: GCTGTCCGAACTGCACGCGCAGCTGTCGGGCGTGGA...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCGATGGCGTCAGGCATTaGGCTGTAGCCGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSDGVRH*AVAAAA
Trigger: GGCAGCGGCGGCTACAGCGCAATGCCTGACGCCATC...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGTCCCCCTGCAGCAGTaGCCACTCATACTGGACGAT +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVVPLQQ*PLILDD
Trigger: ATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGAC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCACCGTACTCCTTAGCTaGACTCTTTTTCTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCTVLLS*TLFLFL
Trigger: TAGAAAGAGAAAAAGAGTGCAGCTAAGGAGTACGGT...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCCTGGTGACCTCACAGTaGTGGCACGGGCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLLVTSQ*WHGLEF
Trigger: AAACTCCAGCCCGTGCCAGCACTGTGAGGTCACCAG...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAGGGCGACGGAGGCCATaGCGACGAGAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTGRRRP*RREPRA
Trigger: TGCCCTTGGCTCTCGTCGCCATGGCCTCCGTCGCCC...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCCCCAGCCTTGCTAAGTaGAGGCGCATCCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CHRLTASLPESGTTSAPLPSLAK*RRILFL
Trigger: CAGGAAAAGGATGCGCCTCCACTTAGCAAGGCTGGG...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGACCAGGACAAACAAGTaGCCGGTGAGGTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVTRTNK*PVRCWP
Trigger: TGGCCAGCACCTCACCGGCCACTTGTTTGTCCTGGT...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 72 bp ATCACCAGAACCTGTTCCTCCGGTCTCAGTGACACTTaGTACCCTTTGACCAGCGTCTCTCCTTTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ITRTCSSGLSDT*YPLTSVSPFPV
Trigger: GACTGGGAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTCACTGAGACCGGAGGAACAGGTTCTGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTAGCTCCAGCTCCTCCTaGGGCCGCTCCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVSSSSS*GRSCCS
Trigger: ACTGCAGCAGGAGCGGCCTCAGGAGGAGCTGGAGCT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATAGCTCCAGCTCCTCCTaGGGCCGCTCCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHSSSSS*GRSCCS
Trigger: ACTGCAGCAGGAGCGGCCTCAGGAGGAGCTGGAGCT...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCACCTTCATGTCCACTaGCGGGTCCCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSHLHVH*RVPLQQ
Trigger: CTGCTGCAGGGGGACCCGTCAGTGGACATGAAGGTG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCCCTGTCCAGCTGCAATaGATTAGCAGGGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: CHRLTASLPESGTTSAPLPVQLQ*ISRADG
Trigger: TCCATCAGCCCTGCTAATTCATTGCAGCTGGACAGG...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCGAACTTGCAGACGTTaGGGCCGCGCGCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVRTCRR*GRAPCS
Trigger: ACTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATCGAACTTGCAGACGTTaGGGCCGCGCGCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHRTCRR*GRAPCS
Trigger: ACTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCG...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACATGTGCAGCGCGAACTTaGAGACGTTGCGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTCAART*RRCGRA
Trigger: CGCGCGGCCGCAACGTCTGCAAGTTCGCGCTGCACA...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGAAGTGGCCGGTGAGGTaGTGGCCATCTGCTCATATC +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVKWPVR*WPSAHI
Trigger: GATATGAGCAGATGGCCAGCACCTCACCGGCCACTT...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGAACCACCCCGTCTGTaGGCAGATGCAGAACCACAT +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVEPPRL*ADAEPH
Trigger: ATGTGGTTCTGCATCTGCCCACAGACGGGGTGGTTC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCGTTCCCTCCTGTAGGTaGGACAGCTTCAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLVPSCR*DSFRVP
Trigger: AGGAACCCTGAAGCTGTCCCACCTACAGGAGGGAAC...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAACCATCCATCTCCTGTaGAGTAGGCTGCGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRTIHLL*SRLREA
Trigger: TGCTTCGCGCAGCCTACTCCACAGGAGATGGATGGT...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTAGTCGGCCTCGGCGTTaGTCAGCACCAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVSRPRR*SAPGVC
Trigger: GCACACACCTGGTGCTGATCAACGCCGAGGCCGACT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGCGAAGCACTGTCACTaGCACGTTGTCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRAKHCH*HVVRAS
Trigger: AGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp TTACCTCTGGAGCCCGGAAAGCTGCCTGAGGAAATAAACCAGGACAAACAAGTGGCACCTCTCCAGAAGTaGATTGTGTGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLEPGKLPEEINQDKQVAPLQK*IVCVVR
Trigger: CCTCACCACACACACAATTCACTTCTGGAGAGGTGC...CACTTGTTTGTCCTGGTTTATTTCCTCAGGCAGCTTTCCGGGCTCCAGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTAACTCCTCCAGCAGCTaGTCCACGCCCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVNSSSS*STPDSC
Trigger: GCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCTGCAGAACCACATCCTaGCCAGCCTTGCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLCRTTS*PALLSG
Trigger: TCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCA...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCACTGACGGGTCCCCCTaGAGCAGTGCCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSTDGSP*SSAHSY
Trigger: GTATGAGTGGGCACTGCTGCAGGGGGACCCGTCAGT...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCCATCAGGACACTGCTaGACTCCATCGCAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSPSGHC*TPSQAS
Trigger: GCTCGCCTGCGATGGAGTGCAGCAGTGTCCTGATGG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCGCTCTCCTGTCCAGCTaGAATGAATTAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLALLSS*NELAGL
Trigger: CAGCCCTGCTAATTCATTGCAGCTGGACAGGAGAGC...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAGGCCGCACGGCCGCTTaGCAGCCACAGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIGRTAA*QPQAEQ
Trigger: CTGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCC...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCGGCCCTGTGGTTCTTaGCAGGGCAGGACTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVRPCGS*QGRTSC
Trigger: GCAGCTAGTCCTGCCCTGCCAAGAACCACAGGGCCG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAAGCTTAACCCCTGGCTaGACAGGTTGTCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRSLTPG*TGCHQP
Trigger: TGGCTGATGACAACCTGTCCAGCCAGGGGTTAAGCT...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGAATCCGGGCTGAGCTaGACAGACTGTTTACTCGCT +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRESGLS*TDCLLA
Trigger: AGCGAGTAAACAGTCTGTCCAGCTCAGCCCGGATTC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 72 bp TCCACTGGTCCTGGTGGCCAAGGGACCAATGATGTTTaGAGTAGCTGCCCAGCAAAGGGACTCAACAATGTT +
Preference number: 4 (lower is better)
Translates to: STGPGGQGTNDV*SSCPAKGLNNV
Trigger: AACATTGTTGAGTCCCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCCCTTGGCCACCAGGACCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTAGTCCTTGGTGCGGATaGTGGCGTCAGGCATTGCGC +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVSPWCG*WRQALR
Trigger: GCGCAATGCCTGACGCCATCATCCGCACCAAGGACT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGACTCAACAATGTTTTaGGTAGCTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRDSTMF*VAGWLS
Trigger: GGAGAGCCAGCCAGCTACTCAAAACATTGTTGAGTC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGGACCAATGATGTTTTaGGTAGCTGCCCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRGPMMF*VAAQQR
Trigger: CCTTTGCTGGGCAGCTACTCAAAACATCATTGGTCC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCGTCCCCCTGCAGCAGTaGCCACTCATACTGGACGAT +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSVPLQQ*PLILDD
Trigger: ATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGAC...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGACCCATCAGGACACTaGTGCACTCCATCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVDPSGH*CTPSQA
Trigger: CGCCTGCGATGGAGTGCAGCAGTGTCCTGATGGGTC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCAAGGAGTCACCCCCTaGATCTTCACTCGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSQGVTP*IFTRPC
Trigger: ACAGGGCCGAGTGAAGATGCAGGGGGTGACTCCTTG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCACTCATACTGGACGATaGCGTGGTCATCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLTHTGR*RGHLCS
Trigger: AGAGCACAGATGACCACGCCATCGTCCAGTATGAGT...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACACTTCACTCGGCCCTGTaGTTCTTGGCAGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTLHSAL*FLAGQD
Trigger: GTCCTGCCCTGCCAAGAACCACAGGGCCGAGTGAAG...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACACCTGTTTCTGGGGCTaGGTGTTCCCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHTCFWG*VFPSSS
Trigger: GGAGGAGGAGGGGAACACCCAGCCCCAGAAACAGGT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACCACTGCACCTGTTTCTaGGGCTGGGTGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHHCTCF*GWVFPS
Trigger: GGAGGGGAACACCCAGCCCCAGAAACAGGTGCAGTG...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCAAAATTAGCAGGGCGTaGTGGTGCACACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLKISRA*WCTPVV
Trigger: GACTACAGGTGTGCACCACCACGCCCTGCTAATTTT...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATAGTGCTGGCACGGGCTaGAGTTTGGTGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHSAGTG*SLVPVL
Trigger: CAGGACAGGCACCAAACTCCAGCCCGTGCCAGCACT...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACCATCGCAGGCGAGCGTaGTGTCAATGCAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHHRRRA*CQCSSH
Trigger: ATGGCTGCTGCATTGACATCACGCTCGCCTGCGATG...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGAATTGTGTGTGTGGTaGGGGGTTCCCTCTACAATA +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRELCVW*GVPSTI
Trigger: TATTGTAGAGGGAACCCCTCACCACACACACAATTC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTCCGTCTGTGGGCAGATaGAGAACCACATCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVPSVGR*RTTSCP
Trigger: TGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGG...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTGGCGTGGTCATCTGTaGTCTCGCGGCCGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVWRGHL*SRGRLE
Trigger: TTCTAGACGGCCGCGAGAGCACAGATGACCACGCCA...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTGTCAGAGCTTCTCTaGCCGGCAGTGTCCGTCACG +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVLSELL*PAVSVT
Trigger: CGTGACGGACACTGCCGGGCAGAGAAGCTCTGACAA...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGAGGTGCTGGCCATCTaGTCATATCAGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHEVLAI*SYQCRP
Trigger: GGGCCTGCACTGATATGAGCAGATGGCCAGCACCTC...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCCCAGCCTTGCTAAGTaGAGGCGCATCCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSPSLAK*RRILFL
Trigger: CAGGAAAAGGATGCGCCTCCACTTAGCAAGGCTGGG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACATACTGGACGATGGCGTaGTCATCTGTGCTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTYWTMA*SSVLSR
Trigger: CCGCGAGAGCACAGATGACCACGCCATCGTCCAGTA...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTGGACTAGCTGCCGTGTaGGTTACCATCTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVGLAAV*VTILRS
Trigger: GGACCGCAAGATGGTAACCCACACGGCAGCTAGTCC...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAAACAGATGCAGCAAATaGACCATCCATCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRNRCSK*TIHLLW
Trigger: CCACAGGAGATGGATGGTCCATTTGCTGCATCTGTT...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCAGTAAGCTTAACCCCTaGCTGGACAGGTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLSKLNP*LDRLSS
Trigger: TGATGACAACCTGTCCAGCCAGGGGTTAAGCTTACT...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCTGTCCTGTCTGTGAATaGTTACCCTGCTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: CHRLTASLPESGTTSAPLCPVCE*LPCFLT
Trigger: TGTAAGGAAGCAGGGTAACCATTCACAGACAGGACA...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCAGGGCAGGACTAGCTaGCGTGTGGGTTACCATCTT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVQGRTS*RVGYHL
Trigger: AAGATGGTAACCCACACGGCAGCTAGTCCTGCCCTG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGACCTCATTCTGCACTCTaGTGGCTTAATTACCATCTG +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRPHSAL*WLNYHL
Trigger: CAGATGGTAATTAAGCCAGCAGAGTGCAGAATGAGG...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAGAACCACCCCGTCTGTaGGCAGATGCAGAACCACAT +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTEPPRL*ADAEPH
Trigger: ATGTGGTTCTGCATCTGCCCACAGACGGGGTGGTTC...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAGTTCCCTCCTGTAGGTaGGACAGCTTCAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTVPSCR*DSFRVP
Trigger: AGGAACCCTGAAGCTGTCCCACCTACAGGAGGGAAC...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTGCAAACATCCTCCTGTaGAGTAGGCTGCGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVANILL*SRLREA
Trigger: TGCTTCGCGCAGCCTACTCCACAGGAGGATGTTTGC...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATTGGCCGGTGAGGTGCTaGCCATCTGCTCATATCAGT +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHWPVRC*PSAHIS
Trigger: ACTGATATGAGCAGATGGCCAGCACCTCACCGGCCA...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTGCGAAGCACTGTCACTaGCACGTTGTCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVAKHCH*HVVRAS
Trigger: AGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGC...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACCTGGCATCACAGGAATaGTTTGACTCTCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHLASQE*FDSLVP
Trigger: GGGGACCAGAGAGTCAAATCATTCCTGTGATGCCAG...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTTGCAGAACCACATCCTaGCCAGCCTTGCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVCRTTS*PALLSG
Trigger: TCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCA...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACATGTGGGTTACCATCTTaGGGTCCAGGCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTCGLPS*GPGPDS
Trigger: AGAATCTGGGCCTGGACCGCAAGATGGTAACCCACA...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACAGTGCCCACTCATACTaGACGATGGCGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHSAHSY*TMAWSS
Trigger: AGATGACCACGCCATCGTCCAGTATGAGTGGGCACT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACTGCAGGTGGCTTGTTTaGGGCAGTGGCTTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHCRWLV*GSGFLR
Trigger: TCTCAGAAAGCCACTGCCCCAAACAAGCCACCTGCA...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTAGAACAAGGGGAAGCTaGGCCTATAGCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVRTRGS*AYSSPA
Trigger: TGCTGGACTGCTATAGGCCCAGCTTCCCCTTGTTCT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGACATTCTGCACTCTGCTaGCTTAATTACCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRHSALC*LNYHLD
Trigger: ATCCAGATGGTAATTAAGCCAGCAGAGTGCAGAATG...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTCAGGGTTCCTGATTaGGGCACCTTCATGTCCACT +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVFRVPD*GTFMST
Trigger: AGTGGACATGAAGGTGCCTCAATCAGGAACCCTGAA...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAGAAGAAGTGGTAGCGTaGGCAAGTGTGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTEEVVA*ASVQTS
Trigger: GGATGTTTGCACACTTGCTCACGCTACCACTTCTTC...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCCCCAAAAGGCGGAATaGTTCCTCTTCTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSPQKAE*FLFSVF
Trigger: AAACACAGAGAAGAGGAATCATTCCGCCTTTTGGGG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACAGGCAGCCACCTATATaGCATGACGTCAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHRQPPI*HDVRGI
Trigger: AATCCCTCTGACGTCATGTCATATAGGTGGCTGCCT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCTTACATCAAGCTAACTaGCATATCTATCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: NELAGLMESGLSWTDCLLLHQAN*HIYHLP
Trigger: GGGGAGATGATAGATATGTCAGTTAGCTTGATGTAA...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGTAGCACTTTCAAATTaGTGGGTCCTTTGCGTATTT +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRVALSN*WVLCVF
Trigger: AAATACGCAAAGGACCCATCAATTTGAAAGTGCTAC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATATACTGGACGATGGCGTaGTCATCTGTGCTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIYWTMA*SSVLSR
Trigger: CCGCGAGAGCACAGATGACCACGCCATCGTCCAGTA...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTACTCATACTGGACGATaGCGTGGTCATCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVTHTGR*RGHLCS
Trigger: AGAGCACAGATGACCACGCCATCGTCCAGTATGAGT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACTCCAGGCCCAGATTCTaGCAGAAGTCTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHSRPRF*QKSSSD
Trigger: GTCTGATGAAGACTTCTGCCAGAATCTGGGCCTGGA...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAGTGACCTCACAGTGCTaGCACGGGCTGGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIVTSQC*HGLEFG
Trigger: ACCAAACTCCAGCCCGTGCCAGCACTGTGAGGTCAC...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATAATGTTTTGAGTAGCTaGCTGGCTCTCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHNVLSS*LALLSS
Trigger: GCTGGACAGGAGAGCCAGCCAGCTACTCAAAACATT...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACGCTTGTTTGGGGCAGTaGCTTTCTGAGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHACLGQ*LSETFP
Trigger: TGGAAAAGTCTCAGAAAGCCACTGCCCCAAACAAGC...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCAATGATTTGACTCTCTaGTCCCCAAAAGGCGGAATG +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSNDLTL*SPKGGM
Trigger: CATTCCGCCTTTTGGGGACCAGAGAGTCAAATCATT...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGGCTTAATTACCATCTaGATCCTGAGTATTGAATAC +
Preference number: 4 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRGLITI*ILSIEY
Trigger: GTATTCAATACTCAGGATCCAGATGGTAATTAAGCC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATACTGGCAATTTACCTCTaGAGCCCGGAAAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWILAIYL*SPESCL
Trigger: CAGGCAGCTTTCCGGGCTCCAGAGGTAAATTGCCAG...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
3UTR CAA 72 bp CTTCCTTACAGTAAGCTTAACCCCTGGCTGGACAGGTaGTCATCAGCCAAACAAATTTTTAATGCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: LPYSKLNPWLDR*SSAKQIFNAAY
Trigger: ATAGGCGGCATTAAAAATTTGTTTGGCTGATGACAACCTGTCCAGCCAGGGGTTAAGCTTACTGTAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAATCACAGGAATGATTTaGCTCTCTGGTCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTITGMI*LSGPQK
Trigger: CTTTTGGGGACCAGAGAGTCAAATCATTCCTGTGAT...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTGATACATCCCATTTATaGGGTAGTCCGATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVDTSHL*GSPIPQ
Trigger: CTGAGGAATCGGACTACCTCATAAATGGGATGTATC...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTCACCTCCTGAGATGCTaGATTTTCTCTCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVHLLRC*IFSQLS
Trigger: ACTTAGCTGAGAGAAAATTCAGCATCTCAGGAGGTG...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAGGCATGAACTTGCTTaGGATCCACTCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTRHELA*DPLSET
Trigger: TGTTTCTGAGAGTGGATCTCAAGCAAGTTCATGCCT...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAATAAATGAGTTGCTGTaGTCTCACCATGGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTINELL*SHHGAV
Trigger: CACTGCTCCATGGTGAGAGCACAGCAACTCATTTAT...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAAGTGCCCACTCATACTaGACGATGGCGTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWISAHSY*TMAWSS
Trigger: AGATGACCACGCCATCGTCCAGTATGAGTGGGCACT...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCATCGACTCATTCCATTaGATGAAAGCCATGGTGACA +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSIDSFH*MKAMVT
Trigger: TGTCACCATGGCTTTCATCCAATGGAATGAGTCGAT...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAGTGAGCCATCCCTGCTaGAGACAATGTCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIVSHPC*RQCHVS
Trigger: GGAGACATGACATTGTCTCCAGCAGGGATGGCTCAC...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATCCAGAAATTTACAGCTaGCAATTTACCTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHPEIYS*QFTSGA
Trigger: GGCTCCAGAGGTAAATTGCCAGCTGTAAATTTCTGG...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR TCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACTTTTCTGTTCTTCCCTaGGGAACTACTATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHFSVLP*GTTIWH
Trigger: ATGCCAGATAGTAGTTCCTCAGGGAAGAACAGAAAA...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCTGGCATTAGCTaGTGGCACATTCTAACATTT +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTKPGIS*WHILTF
Trigger: AAATGTTAGAATGTGCCATCAGCTAATGCCAGGCTT...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGATTTCCTATCTCACTaGATGACCATCTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVDFLSH*MTILEL
Trigger: CAGCTCTAAGATGGTCATGCAGTGAGATAGGAAATC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCTCCTCCATCACCCTTTaGCTCAAATATATAACTTTC +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSSSITL*LKYITF
Trigger: GAAAGTTATATATTTGAGTCAAAGGGTGATGGAGGA...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCCTGCCCCAAGGTATTaGAATTACATTACTATAGAT +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSPAPRY*NYITID
Trigger: ATCTATAGTAATGTAATTTCAATACCTTGGGGCAGG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACATCTCCTTGCTCTCTTTaGCTTCAACTAAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTSPCSL*LQLSFC
Trigger: ACAGAAACTTAGTTGAAGGCAAAGAGAGCAAGGAGA...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR GCA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAGATGTGCTGAAAGCTaGATGCCTCATCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTRCAES*MPHQFL
Trigger: TAAAAACTGATGAGGCATGCAGCTTTCAGCACATCT...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTGTTTCTGTTAGTTTTTaGCATGCCAGATTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVVSVSF*HARFSA
Trigger: AGCAGAGAATCTGGCATGCCAAAAACTAACAGAAAC...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACTTCCCTAAGGCTTACTaGCTTGTACATAAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHFPKAY*LVHKVY
Trigger: ATAAACCTTATGTACAAGTCAGTAAGCCTTAGGGAA...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATTATTATATCAGCAATTaGTTACACCCAAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHYYISN*LHPRAK
Trigger: CTTGGCTCTTGGGTGTAATCAATTGCTGATATAATA...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR GCA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTGTGCTGAAAGCTGCATaGCTCATCAGTTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVVLKAA*LISFYF
Trigger: AAAATAAAAACTGATGAGGCATGCAGCTTTCAGCAC...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CCA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCAGATACAGAACATCTTaGATATTTCAACACCATAGC +
Preference number: 4 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSRYRTS*IFQHHS
Trigger: GCTATGGTGTTGAAATATCCAAGATGTTCTGTATCT...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR TCA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATATTACCATCTGGATCCTaGGTATTGAATACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SLYNTTISLVSLSSMQWILPSGS*VLNTEN
Trigger: ATTCTCAGTATTCAATACTCAGGATCCAGATGGTAA...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS TCA 90 bp GAGGCCATGGCGACGAGAGCCAAGGGCAGCGAGCCGAGGCGGGGCTaGGCGCGGGAGGAAGGCGGGGACGCGGGCGAGCGCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EAMATRAKGSEPRRG*AREEGGDAGERGPW
Trigger: CCAGGGCCCGCGCTCGCCCGCGTCCCCGCCTTCCTCCCGCGCTCAGCCCCGCCTCGGCTCGCTGCCCTTGGCTCTCGTCGCCATGGCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS GCA 90 bp ACGGCCACGGAGCAGCGCGGCTCGGAGCAGCAGGCCGCCACGCATTaGCGCCAGCCCCGCACGGCCGCCGGCGCCCGCAGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TATEQRGSEQQAATH*RQPRTAAGARRKLA
Trigger: TGCCAGCTTCCTGCGGGCGCCGGCGGCCGTGCGGGGCTGGCGGCAATGCGTGGCGGCCTGCTGCTCCGAGCCGCGCTGCTCCGTGGCCGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 90 bp CCTCGCCGGAGACTGCCCAGCGCCCTGCGCCTCTCCGCCCCGGCCTaGGGCGCGCTGGGTGGCGACGAGTCGGCCTCGGCGTTGATCAGC +
Preference number: 5 (lower is better)
Translates to: PRRRLPSALRLSAPA*GALGGDESASALIS
Trigger: GCTGATCAACGCCGAGGCCGACTCGTCGCCACCCAGCGCGCCGCAGGCCGGGGCGGAGAGGCGCAGGGCGCTGGGCAGTCTCCGGCGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 90 bp CTTGGCAGCCACAGGCAGAGCAGTAGCAGCCCGCGCAGCGCCCCGTaGCGCGGCGGTAGCCGGCGCTGCGAGCCCGCGCTCTCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: LGSHRQSSSSPRSAP*RGGSRRCEPALSWA
Trigger: CGCCCAGGAGAGCGCGGGCTCGCAGCGCCGGCTACCGCCGCGTCACGGGGCGCTGCGCGGGCTGCTACTGCTCTGCCTGTGGCTGCCAAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 90 bp CGGCGGAACTCCTCCAGCAGCTGCTCCACGCCCGACAGCTGCGCGTaGAGTTCGGACAGCGGCGCCGCGGGCGGCAAGGCCGCACGGCCG +
Preference number: 5 (lower is better)
Translates to: RRNSSSSCSTPDSCA*SSDSGAAGGKAARP
Trigger: CGGCCGTGCGGCCTTGCCGCCCGCGGCGCCGCTGTCCGAACTGCACGCGCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTTCCGCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 90 bp GTAGCCGGCGCTGCGAGCCCGCGCTCTCCTGGGCGACGGAGGCCATaGCGACGAGAGCCAAGGGCAGCGAGCCGAGGCGGGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: VAGAASPRSPGRRRP*RREPRAASRGGAER
Trigger: GCGCTCAGCCCCGCCTCGGCTCGCTGCCCTTGGCTCTCGTCGCCATGGCCTCCGTCGCCCAGGAGAGCGCGGGCTCGCAGCGCCGGCTAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 90 bp CCCGCAGGAAGCTGGCACCCGCCGCCAGGGAGTCCTTGGTGCGGATaGTGGCGTCAGGCATTGCGCTGTAGCCGCCGCTGCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: PAGSWHPPPGSPWCG*WRQALRCSRRCPGP
Trigger: CGGGCCCGGGCAGCGGCGGCTACAGCGCAATGCCTGACGCCATCATCCGCACCAAGGACTCCCTGGCGGCGGGTGCCAGCTTCCTGCGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS TCA 90 bp TGTGCAGCGCGAACTTGCAGACGTTGCGGCCGCGCGCCGTGCAGTTaGAGAGGTAGCAGCCGAGCACGGCTGCCGGGGGCGCGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: CAARTCRRCGRAPCS*RGSSRARLPGARGA
Trigger: GGCGCCCCGCGCCCCCGGCAGCCGTGCTCGGCTGCTACCTCTTCAACTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCGCGCTGCACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 90 bp AGTTGCCGGCGGAACTCCTCCAGCAGCTGCTCCACGCCCGACAGCTaGGCGTGCAGTTCGGACAGCGGCGCCGCGGGCGGCAAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: SCRRNSSSSCSTPDS*ACSSDSGAAGGKAA
Trigger: TGCGGCCTTGCCGCCCGCGGCGCCGCTGTCCGAACTGCACGCGCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTTCCGCCGGCAACT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS-3UTR CAA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCCTGTGCAGCGCGAACTaGCAGACGTTGCGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCLCSAN*QTLRPR
Trigger: GCGCGGCCGCAACGTCTGCAAGTTCGCGCTGCACAG...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS CCA 90 bp GACGGGTCCCCCTGCAGCAGTGCCCACTCATACTGGACGATGGCGTaGTCATCTGTGCTCTCGCGGCCGTCTAGAACCACCCCGTCTGTG +
Preference number: 5 (lower is better)
Translates to: DGSPCSSAHSYWTMA*SSVLSRPSRTTPSV
Trigger: CACAGACGGGGTGGTTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGACCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 90 bp CCACTGACGGGTCCCCCTGCAGCAGTGCCCACTCATACTGGACGATaGCGTGGTCATCTGTGCTCTCGCGGCCGTCTAGAACCACCCCGT +
Preference number: 5 (lower is better)
Translates to: PLTGPPAAVPTHTGR*RGHLCSRGRLEPPR
Trigger: ACGGGGTGGTTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGACCCGTCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 90 bp TCTGTGCTCTCGCGGCCGTCTAGAACCACCCCGTCTGTGGGCAGATaGAGAACCACATCCTGCCCAGCCTTGCTAAGTGGAGGCGCATCC +
Preference number: 5 (lower is better)
Translates to: SVLSRPSRTTPSVGR*RTTSCPALLSGGAS
Trigger: GGATGCGCCTCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGGGGTGGTTCTAGACGGCCGCGAGAGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 90 bp CCTGCAGCAGTGCCCACTCATACTGGACGATGGCGTGGTCATCTGTaGTCTCGCGGCCGTCTAGAACCACCCCGTCTGTGGGCAGATGCA +
Preference number: 5 (lower is better)
Translates to: PAAVPTHTGRWRGHL*SRGRLEPPRLWADA
Trigger: TGCATCTGCCCACAGACGGGGTGGTTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS-3UTR CAA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACAACATCCTGCCCAGCCTaGCTAAGTGGAGGCGCATCC +
Preference number: 5 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTTSCPA*LSGGAS
Trigger: GGATGCGCCTCCACTTAGCAAGGCTGGGCAGGATGT...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS CCA 90 bp TTCATGTCCACTGACGGGTCCCCCTGCAGCAGTGCCCACTCATACTaGACGATGGCGTGGTCATCTGTGCTCTCGCGGCCGTCTAGAACC +
Preference number: 5 (lower is better)
Translates to: FMSTDGSPCSSAHSY*TMAWSSVLSRPSRT
Trigger: GGTTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGACCCGTCAGTGGACATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS TCA 90 bp GGACCATCCATCTCCTGTGGAGTAGGCTGCGCGAAGCACTGTCACTaGCACGTTGTCAGAGCTTCTCTGCCCGGCAGTGTCCGTCACGGT +
Preference number: 5 (lower is better)
Translates to: GPSISCGVGCAKHCH*HVVRASLPGSVRHG
Trigger: ACCGTGACGGACACTGCCGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGCGCAGCCTACTCCACAGGAGATGGATGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS CCA 90 bp TCACTCGGCCCTGTGGTTCTTGGCAGGGCAGGACTAGCTGCCGTGTaGGTTACCATCTTGCGGTCCAGGCCCAGATTCTGGCAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SLGPVVLGRAGLAAV*VTILRSRPRFWQKS
Trigger: AGACTTCTGCCAGAATCTGGGCCTGGACCGCAAGATGGTAACCCACACGGCAGCTAGTCCTGCCCTGCCAAGAACCACAGGGCCGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 90 bp GTGCAAACATCCTCCTGTGGAGTAGGCTGCGCGAAGCACTGTCACTaGCACGTTGTCAGAGCTTCTCTGCCCGGCAGTGTCCGTCACGGT +
Preference number: 5 (lower is better)
Translates to: VQTSSCGVGCAKHCH*HVVRASLPGSVRHG
Trigger: ACCGTGACGGACACTGCCGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGCGCAGCCTACTCCACAGGAGGATGTTTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCGCGAACTTGCAGACGTaGCGGCCGCGCGCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: NELAGLMESGLSWTDCLLANLQT*RPRAVQ
Trigger: CTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCGC...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCGCCGGGCACCGCTCCTaGCCCTCGCCGGAGACTGCC +
Preference number: 5 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSAGHRS*PSPETA
Trigger: GGCAGTCTCCGGCGAGGGCAAGGAGCGGTGCCCGGC...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCGGACTCAACAATGTTTaGAGTAGCTGGCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCGLNNV*SSWLAL
Trigger: GAGAGCCAGCCAGCTACTCAAAACATTGTTGAGTCC...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS GCA 90 bp CCCAGATTCTGGCAGAAGTCTTCATCAGACCCATCAGGACACTGCTaGACTCCATCGCAGGCGAGCGTGATGTCAATGCAGCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: PRFWQKSSSDPSGHC*TPSQASVMSMQQPS
Trigger: CGATGGCTGCTGCATTGACATCACGCTCGCCTGCGATGGAGTGCAGCAGTGTCCTGATGGGTCTGATGAAGACTTCTGCCAGAATCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS GCA 90 bp AGGCCCAGATTCTGGCAGAAGTCTTCATCAGACCCATCAGGACACTaGTGCACTCCATCGCAGGCGAGCGTGATGTCAATGCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RPRFWQKSSSDPSGH*CTPSQASVMSMQQP
Trigger: TGGCTGCTGCATTGACATCACGCTCGCCTGCGATGGAGTGCAGCAGTGTCCTGATGGGTCTGATGAAGACTTCTGCCAGAATCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TGCCTGGCAAGGACCCTGCACACTGCATACACTAAGAAAATACACGATGACCGAGCCGCCAGGGAGTCCTaGGTGCGGATGATGGCGTCA +
Preference number: 5 (lower is better)
Translates to: CLARTLHTAYTKKIHDDRAARES*VRMMAS
Trigger: TGACGCCATCATCCGCACCAAGGACTCCCTGGCGGC...TCGGTCATCGTGTATTTTCTTAGTGTATGCAGTGTGCAGGGTCCTTGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp CAGGGACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACATCCTTAGCTTCCCTCTaGGAACAGATGCAGCAAATG +
Preference number: 5 (lower is better)
Translates to: QGPPVHHSIPSAWQGPCTSLASL*EQMQQM
Trigger: CATTTGCTGCATCTGTTCCAAGAGGGAAGCTAAGGA...TGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp TGTCACAGACTTACTGCAAGTTTACCAGAGTCAGGGACCACCAGTGCACCACTCGGCACGGGCTGGAGTTaGGTGCCTGTCCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: CHRLTASLPESGTTSAPLGTGWS*VPVLSV
Trigger: CACAGACAGGACAGGCACCAAACTCCAGCCCGTGCC...GAGTGGTGCACTGGTGGTCCCTGACTCTGGTAAACTTGCAGTAAGTCTGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS CCA 90 bp AGTTCTTTCGGTCCACTGACGGACTCCTCCTGTCCTGAGCTCTCATaGCCTCAGGGAATATCCTCAGCCAGAGGGCATGCAGTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SSFGPLTDSSCPELS*PQGISSARGHAVLR
Trigger: TCTCAGAACTGCATGCCCTCTGGCTGAGGATATTCCCTGAGGCCATGAGAGCTCAGGACAGGAGGAGTCCGTCAGTGGACCGAAAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTAGGCCGCACGGCCGCTaGGCAGCCACAGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVRPHGR*AATGRA
Trigger: TGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCCT...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGCGAACTTGCAGACGTaGCGGCCGCGCGCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVANLQT*RPRAVQ
Trigger: CTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCGC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp GACCACCAGTGCACCACTCTATCCCCAGTGCCTGGCAAGGACCCTGCACACTGCGGTAGCACTTTCAAATaGATGGGTCCTTTGCGTATT +
Preference number: 5 (lower is better)
Translates to: DHQCTTLSPVPGKDPAHCGSTFK*MGPLRI
Trigger: AATACGCAAAGGACCCATCAATTTGAAAGTGCTACC...GCAGTGTGCAGGGTCCTTGCCAGGCACTGGGGATAGAGTGGTGCACTGGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS CCA 90 bp GCATGCAGTTCTGAGAAGACTACAGTCTGCAAAGGGTTTCCAAGGTaGACATTTACCTGTTTCTGGGGCTGGGTGTTCCCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ACSSEKTTVCKGFPR*TFTCFWGWVFPSSS
Trigger: GGAGGAGGAGGGGAACACCCAGCCCCAGAAACAGGTAAATGTCCACCTTGGAAACCCTTTGCAGACTGTAGTCTTCTCAGAACTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTCCGCTCCTGCTGCAGTaGCCGGCGGAACTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVPLLLQ*PAELLQ
Trigger: CTGGAGGAGTTCCGCCGGCAACTGCAGCAGGAGCGG...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACCTGTGCAGCGCGAACTaGCAGACGTTGCGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHLCSAN*QTLRPR
Trigger: GCGCGGCCGCAACGTCTGCAAGTTCGCGCTGCACAG...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp AATGAATTAGCAGGGCTGATGGAATCCGGGCTGAGCTGGACAGACTGTTTACTCTCCCAGAGTCAGCACTaGACTCAGACCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: NELAGLMESGLSWTDCLLSQSQH*TQTLSR
Trigger: CCTGGACAGGGTCTGAGTCAAGTGCTGACTCTGGGA...GAGTAAACAGTCTGTCCAGCTCAGCCCGGATTCCATCAGCCCTGCTAATTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGCCGCCAGGGAGTCCTaGGTGCGGATGATGGCGTCA +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVAARES*VRMMAS
Trigger: TGACGCCATCATCCGCACCAAGGACTCCCTGGCGGC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACGAGTCGGCCTCGGCGTaGATCAGCACCAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHESASA*ISTRCV
Trigger: CACACACCTGGTGCTGATCAACGCCGAGGCCGACTC...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAAGGCCGCACGGCCGCTaGGCAGCCACAGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIRPHGR*AATGRA
Trigger: TGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCCT...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS TCA 90 bp TCTCATGGCCTCAGGGAATATCCTCAGCCAGAGGGCATGCAGTTCTaGGAAGACTACAGTCTGCAAAGGGTTTCCAAGGTGGACATTTAC +
Preference number: 5 (lower is better)
Translates to: SHGLREYPQPEGMQF*EDYSLQRVSKVDIY
Trigger: GTAAATGTCCACCTTGGAAACCCTTTGCAGACTGTAGTCTTCTCAGAACTGCATGCCCTCTGGCTGAGGATATTCCCTGAGGCCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS GCA 90 bp AATATCCTCAGCCAGAGGGCATGCAGTTCTGAGAAGACTACAGTCTaGAAAGGGTTTCCAAGGTGGACATTTACCTGTTTCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NILSQRACSSEKTTV*KGFPRWTFTCFWGW
Trigger: CCAGCCCCAGAAACAGGTAAATGTCCACCTTGGAAACCCTTTGCAGACTGTAGTCTTCTCAGAACTGCATGCCCTCTGGCTGAGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS-3UTR CAA 90 bp CATTGGATGAAAGCCATGGTGACATTTTTACAAAAGCTGTACCCAGGAATCCACACATCCTGCCCAGCCTaGCTAAGTGGAGGCGCATCC +
Preference number: 5 (lower is better)
Translates to: HWMKAMVTFLQKLYPGIHTSCPA*LSGGAS
Trigger: GGATGCGCCTCCACTTAGCAAGGCTGGGCAGGATGT...GTGGATTCCTGGGTACAGCTTTTGTAAAAATGTCACCATGGCTTTCATCCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGTGTGGGTTACCATCTaGCGGTCCAGGCCCAGATTC +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVVWVTI*RSRPRF
Trigger: GAATCTGGGCCTGGACCGCAAGATGGTAACCCACAC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCATGCAGGTGGCTTGTTaGGGGCAGTGGCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSMQVAC*GQWLSE
Trigger: CTCAGAAAGCCACTGCCCCAAACAAGCCACCTGCAT...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTACTGTCACTGACACGTaGTCAGAGCTTCTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVTVTDT*SELLCP
Trigger: CGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGT...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATACTGTCACTGACACGTaGTCAGAGCTTCTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHTVTDT*SELLCP
Trigger: CGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGT...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTGATAATGCAGGTGGCTaGTTTGGGGCAGTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVDNAGG*FGAVAF
Trigger: GAAAGCCACTGCCCCAAACAAGCCACCTGCATTATC...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATCCCTGGCTGGACAGGTaGTCATCAGCCAAACAAATT +
Preference number: 5 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHPWLDR*SSAKQI
Trigger: AATTTGTTTGGCTGATGACAACCTGTCCAGCCAGGG...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp GGTGAGGGGTTCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGGGACCAATGATGTTTaGAGTAGCTGCCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GEGFPLQYYNIFSVAKFHGTNDV*SSCPAK
Trigger: CTTTGCTGGGCAGCTACTCAAAACATCATTGGTCCC...ATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGAACCCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCATCGACTCATTCCATaGGATGAAAGCCATGGTGAC +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVHRLIP*DESHGD
Trigger: GTCACCATGGCTTTCATCCAATGGAATGAGTCGATG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTTCCTCTTCTCTGTGTTaGATAATGCAGGTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVSSSLC*IMQVAC
Trigger: ACAAGCCACCTGCATTATCAAACACAGAGAAGAGGA...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCATCACAGGAATGATTaGACTCTCTGGTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVHHRND*TLWSPK
Trigger: TTTTGGGGACCAGAGAGTCAAATCATTCCTGTGATG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTATTGAAGGCATGAACTaGCTTGAGATCCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVIEGMN*LEIHSQ
Trigger: CTGAGAGTGGATCTCAAGCAAGTTCATGCCTTCAAT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TTTACAAAAGCTGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTAGAAAGATTTGGGATTaGCAGAATCTTCTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: FTKAVPRNPLNVLSSIVVRKIWD*QNLLAQ
Trigger: TTGGGCCAGAAGATTCTGCAAATCCCAAATCTTTCT...AACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACAGCTTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TGTACCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACATTCTCTGCTTCCATCTaGATTTCCTATCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: CTQESTQRPLFNCRFSSTFSASI*ISYLTA
Trigger: TGCAGTGAGATAGGAAATCAAGATGGAAGCAGAGAA...TGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTTTCTCCTTGCTCTCTTaGCCTTCAACTAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVFSLLS*PSTKFL
Trigger: CAGAAACTTAGTTGAAGGCAAAGAGAGCAAGGAGAA...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp TCCCTCTACAATACTACAATATCTTTAGTGTCGCTAAGTTCCATGCAATGGATAGACACTTTGTACCCTTaGACCAGCGTCTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: SLYNTTISLVSLSSMQWIDTLYP*TSVSPF
Trigger: GAAAGGAGAGACGCTGGTCAAAGGGTACAAAGTGTC...TATCCATTGCATGGAACTTAGCGACACTAAAGATATTGTAGTATTGTAGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTCCCTGCCCCAAGGTATaGAAATTACATTACTATAGA +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVPCPKV*KLHYYR
Trigger: TCTATAGTAATGTAATTTCAATACCTTGGGGCAGGG...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCCAGGAATCCACTCAACGTCCTCTCTTCAATTGTCGTTTTTCATCAACAAAGCCCCGAATTAAACCCTTaGTTAAAAGAACAACCTACT +
Preference number: 5 (lower is better)
Translates to: PRNPLNVLSSIVVFHQQSPELNP*LKEQPT
Trigger: AGTAGGTTGTTCTTTTAACAAAGGGTTTAATTCGGG...GCTTTGTTGATGAAAAACGACAATTGAAGAGAGGACGTTGAGTGGATTCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTATATATATAAATGAGTaGCTGTGCTCTCACCATGGA +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVIYINE*LCSHHG
Trigger: TCCATGGTGAGAGCACAGCAACTCATTTATATATAT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS-3UTR CAA 90 bp CCTATCTCACTGCATGACCATCTTAGAGCTGTTACTAATTCAAAGTCTGGGGTTACGTCCTCTCTTCAATaGTCGTTTTTCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: PISLHDHLRAVTNSKSGVTSSLQ*SFFINK
Trigger: TTTGTTGATGAAAAACGACAATTGAAGAGAGGACGT...AACCCCAGACTTTGAATTAGTAACAGCTCTAAGATGGTCATGCAGTGAGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CCA 72 bp CGCGGCGGTAGCCGGCGCTGCGAGCCCGCGCTCTCCTaGGCGACGGAGGCCATGGCGACGAGAGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: RGGSRRCEPALS*ATEAMATRAKG
Trigger: GCCCTTGGCTCTCGTCGCCATGGCCTCCGTCGCCCAGGAGAGCGCGGGCTCGCAGCGCCGGCTACCGCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CAA 90 bp GCAGTTCGGACAGCGGCGCCGCGGGCGGCAAGGCCGCACGGCCGCTaGGCAGCCACAGGCAGAGCAGTAGCAGCCCGCGCAGCGCCCCGT +
Preference number: 6 (lower is better)
Translates to: AVRTAAPRAARPHGR*AATGRAVAARAAPR
Trigger: ACGGGGCGCTGCGCGGGCTGCTACTGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCCTTGCCGCCCGCGGCGCCGCTGTCCGAACTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CAA 90 bp ACCGCAGTAGCGGGAGACATAGCCGGCCCAGCCGGGCACCGCTCCTaGCCCTCGCCGGAGACTGCCCAGCGCCCTGCGCCTCTCCGCCCC +
Preference number: 6 (lower is better)
Translates to: TAVAGDIAGPAGHRS*PSPETAQRPAPLRP
Trigger: GGGGCGGAGAGGCGCAGGGCGCTGGGCAGTCTCCGGCGAGGGCAAGGAGCGGTGCCCGGCTGGGCCGGCTATGTCTCCCGCTACTGCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CCA 72 bp GCTGCGAGCCCGCGCTCTCCTGGGCGACGGAGGCCATaGCGACGAGAGCCAAGGGCAGCGAGCCGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: AASPRSPGRRRP*RREPRAASRGG
Trigger: CCCGCCTCGGCTCGCTGCCCTTGGCTCTCGTCGCCATGGCCTCCGTCGCCCAGGAGAGCGCGGGCTCGCAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CAA 72 bp GCGGGAGACATAGCCGGCCCAGCCGGGCACCGCTCCTaGCCCTCGCCGGAGACTGCCCAGCGCCCTGCGCCT +
Preference number: 6 (lower is better)
Translates to: AGDIAGPAGHRS*PSPETAQRPAP
Trigger: AGGCGCAGGGCGCTGGGCAGTCTCCGGCGAGGGCAAGGAGCGGTGCCCGGCTGGGCCGGCTATGTCTCCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CAA 72 bp ACAGCGGCGCCGCGGGCGGCAAGGCCGCACGGCCGCTaGGCAGCCACAGGCAGAGCAGTAGCAGCCCGCGCA +
Preference number: 6 (lower is better)
Translates to: TAAPRAARPHGR*AATGRAVAARA
Trigger: TGCGCGGGCTGCTACTGCTCTGCCTGTGGCTGCCAAGCGGCCGTGCGGCCTTGCCGCCCGCGGCGCCGCTGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp TCCTCCAGCAGCTGCTCCACGCCCGACAGCTGCGCGTaGAGTTCGGACAGCGGCGCCGCGGGCGGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSCSTPDSCA*SSDSGAAGGKA
Trigger: GGCCTTGCCGCCCGCGGCGCCGCTGTCCGAACTGCACGCGCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp CGGAACTCCTCCAGCAGCTGCTCCACGCCCGACAGCTaGGCGTGCAGTTCGGACAGCGGCGCCGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RNSSSSCSTPDS*ACSSDSGAAGG
Trigger: GCCGCCCGCGGCGCCGCTGTCCGAACTGCACGCGCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTTCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS TCA 72 bp CGAACTTGCAGACGTTGCGGCCGCGCGCCGTGCAGTTaGAGAGGTAGCAGCCGAGCACGGCTGCCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: RTCRRCGRAPCS*RGSSRARLPGA
Trigger: CGCCCCCGGCAGCCGTGCTCGGCTGCTACCTCTTCAACTGCACGGCGCGCGGCCGCAACGTCTGCAAGTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS TCA 72 bp AGCTGGCACCCGCCGCCAGGGAGTCCTTGGTGCGGATaGTGGCGTCAGGCATTGCGCTGTAGCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SWHPPPGSPWCG*WRQALRCSRRC
Trigger: GCAGCGGCGGCTACAGCGCAATGCCTGACGCCATCATCCGCACCAAGGACTCCCTGGCGGCGGGTGCCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp TCCTGCTGCAGTTGCCGGCGGAACTCCTCCAGCAGCTaGTCCACGCCCGACAGCTGCGCGTGCAGTTCGGAC +
Preference number: 6 (lower is better)
Translates to: SCCSCRRNSSSS*STPDSCACSSD
Trigger: GTCCGAACTGCACGCGCAGCTGTCGGGCGTGGAGCAGCTGCTGGAGGAGTTCCGCCGGCAACTGCAGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 72 bp ACTGACGGGTCCCCCTGCAGCAGTGCCCACTCATACTaGACGATGGCGTGGTCATCTGTGCTCTCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: TDGSPCSSAHSY*TMAWSSVLSRP
Trigger: CGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGACCCGTCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp ACTCGGCCCTGTGGTTCTTGGCAGGGCAGGACTAGCTaGCGTGTGGGTTACCATCTTGCGGTCCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: TRPCGSWQGRTS*RVGYHLAVQAQ
Trigger: CTGGGCCTGGACCGCAAGATGGTAACCCACACGGCAGCTAGTCCTGCCCTGCCAAGAACCACAGGGCCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CCA 72 bp CAGATGCAGAACCACATCCTGCCCAGCCTTGCTAAGTaGAGGCGCATCCTTTTCCTGCCGGGGCGAGGCGCG +
Preference number: 6 (lower is better)
Translates to: QMQNHILPSLAK*RRILFLPGRGA
Trigger: CGCGCCTCGCCCCGGCAGGAAAAGGATGCGCCTCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 72 bp CTGTGCTCTCGCGGCCGTCTAGAACCACCCCGTCTGTaGGCAGATGCAGAACCACATCCTGCCCAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: LCSRGRLEPPRL*ADAEPHPAQPC
Trigger: GCAAGGCTGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGGGGTGGTTCTAGACGGCCGCGAGAGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp GTGCCCACTCATACTGGACGATGGCGTGGTCATCTGTaGTCTCGCGGCCGTCTAGAACCACCCCGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: VPTHTGRWRGHL*SRGRLEPPRLW
Trigger: CCACAGACGGGGTGGTTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 72 bp CCCTGCAGCAGTGCCCACTCATACTGGACGATGGCGTaGTCATCTGTGCTCTCGCGGCCGTCTAGAACCACC +
Preference number: 6 (lower is better)
Translates to: PCSSAHSYWTMA*SSVLSRPSRTT
Trigger: GGTGGTTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 72 bp GGTCCCCCTGCAGCAGTGCCCACTCATACTGGACGATaGCGTGGTCATCTGTGCTCTCGCGGCCGTCTAGAA +
Preference number: 6 (lower is better)
Translates to: GPPAAVPTHTGR*RGHLCSRGRLE
Trigger: TTCTAGACGGCCGCGAGAGCACAGATGACCACGCCATCGTCCAGTATGAGTGGGCACTGCTGCAGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp TCGCGGCCGTCTAGAACCACCCCGTCTGTGGGCAGATaGAGAACCACATCCTGCCCAGCCTTGCTAAGTGGA +
Preference number: 6 (lower is better)
Translates to: SRPSRTTPSVGR*RTTSCPALLSG
Trigger: TCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGGGGTGGTTCTAGACGGCCGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CAA 72 bp TCTGTGGGCAGATGCAGAACCACATCCTGCCCAGCCTaGCTAAGTGGAGGCGCATCCTTTTCCTGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: SVGRCRTTSCPA*LSGGASFSCRG
Trigger: GCCCCGGCAGGAAAAGGATGCGCCTCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCATCTGCCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS TCA 72 bp TCCTCCTGTGGAGTAGGCTGCGCGAAGCACTGTCACTaGCACGTTGTCAGAGCTTCTCTGCCCGGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: SSCGVGCAKHCH*HVVRASLPGSV
Trigger: GACACTGCCGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGCGCAGCCTACTCCACAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS GCA 72 bp ACCACCCCGTCTGTGGGCAGATGCAGAACCACATCCTaGCCAGCCTTGCTAAGTGGAGGCGCATCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: TTPSVGRCRTTS*PALLSGGASFS
Trigger: GGAAAAGGATGCGCCTCCACTTAGCAAGGCTGGGCAGGATGTGGTTCTGCATCTGCCCACAGACGGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS GCA 72 bp CGAAGCACTGTCACTGACACGTTGTCAGAGCTTCTCTaGCCGGCAGTGTCCGTCACGGTCAGCTGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: RSTVTDTLSELL*PAVSVTVSWKV
Trigger: CACCTTCCAGCTGACCGTGACGGACACTGCCGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000367368.3
CDS CCA 72 bp GGTCCACTGACGGACTCCTCCTGTCCTGAGCTCTCATaGCCTCAGGGAATATCCTCAGCCAGAGGGCATGCA +
Preference number: 6 (lower is better)
Translates to: GPLTDSSCPELS*PQGISSARGHA
Trigger: TGCATGCCCTCTGGCTGAGGATATTCCCTGAGGCCATGAGAGCTCAGGACAGGAGGAGTCCGTCAGTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS CAA 72 bp GGCAGGGCAGGACTAGCTGCCGTGTGGGTTACCATCTaGCGGTCCAGGCCCAGATTCTGGCAGAAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: GRAGLAAVWVTI*RSRPRFWQKSS
Trigger: TGAAGACTTCTGCCAGAATCTGGGCCTGGACCGCAAGATGGTAACCCACACGGCAGCTAGTCCTGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 72 bp ATCTCCTGTGGAGTAGGCTGCGCGAAGCACTGTCACTaGCACGTTGTCAGAGCTTCTCTGCCCGGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: ISCGVGCAKHCH*HVVRASLPGSV
Trigger: GACACTGCCGGGCAGAGAAGCTCTGACAACGTGTCAGTGACAGTGCTTCGCGCAGCCTACTCCACAGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367368.3
CDS GCA 72 bp GGCTTTCTGAGACTTTTCCACCAAGGAGTCACCCCCTaGATCTTCACTCGGCCCTGTGGTTCTTGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GFLRLFHQGVTP*IFTRPCGSWQG
Trigger: GCCCTGCCAAGAACCACAGGGCCGAGTGAAGATGCAGGGGGTGACTCCTTGGTGGAAAAGTCTCAGAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS GCA 72 bp TGGCAGAAGTCTTCATCAGACCCATCAGGACACTGCTaGACTCCATCGCAGGCGAGCGTGATGTCAATGCAG +
Preference number: 6 (lower is better)
Translates to: WQKSSSDPSGHC*TPSQASVMSMQ
Trigger: CTGCATTGACATCACGCTCGCCTGCGATGGAGTGCAGCAGTGTCCTGATGGGTCTGATGAAGACTTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 72 bp AATACAAGCAACGAGGAGACAGTTCTTTCGGTCCACTaGCGGACTCCTCCTGTCCTGAGCTCTCATGGCCTC +
Preference number: 6 (lower is better)
Translates to: NTSNEETVLSVH*RTPPVLSSHGL
Trigger: GAGGCCATGAGAGCTCAGGACAGGAGGAGTCCGTCAGTGGACCGAAAGAACTGTCTCCTCGTTGCTTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS GCA 72 bp TTCTGGCAGAAGTCTTCATCAGACCCATCAGGACACTaGTGCACTCCATCGCAGGCGAGCGTGATGTCAATG +
Preference number: 6 (lower is better)
Translates to: FWQKSSSDPSGH*CTPSQASVMSM
Trigger: CATTGACATCACGCTCGCCTGCGATGGAGTGCAGCAGTGTCCTGATGGGTCTGATGAAGACTTCTGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CCA 72 bp TGCAAAGGGTTTCCAAGGTGGACATTTACCTGTTTCTaGGGCTGGGTGTTCCCCTCCTCCTCCATCACCCTT +
Preference number: 6 (lower is better)
Translates to: CKGFPRWTFTCF*GWVFPSSSITL
Trigger: AAGGGTGATGGAGGAGGAGGGGAACACCCAGCCCCAGAAACAGGTAAATGTCCACCTTGGAAACCCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS TCA 72 bp AATGCAGCAGCCATCGTCACAGAAGAAGTGGTAGCGTaGGCAAGTGTGCAAACATCCTCCTGTGGAGTAGGC +
Preference number: 6 (lower is better)
Translates to: NAAAIVTEEVVA*ASVQTSSCGVG
Trigger: GCCTACTCCACAGGAGGATGTTTGCACACTTGCTCACGCTACCACTTCTTCTGTGACGATGGCTGCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 72 bp CTCAGGGAATATCCTCAGCCAGAGGGCATGCAGTTCTaGGAAGACTACAGTCTGCAAAGGGTTTCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: LREYPQPEGMQF*EDYSLQRVSKV
Trigger: CACCTTGGAAACCCTTTGCAGACTGTAGTCTTCTCAGAACTGCATGCCCTCTGGCTGAGGATATTCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463728.1
CDS CCA 72 bp CTGTGTTTGATAATGCAGGTGGCTTGTTTGGGGCAGTaGCTTTCTGAGACTTTTCCACCAAGGAGTCACCCC +
Preference number: 6 (lower is better)
Translates to: LCLIMQVACLGQ*LSETFPPRSHP
Trigger: GGGGTGACTCCTTGGTGGAAAAGTCTCAGAAAGCCACTGCCCCAAACAAGCCACCTGCATTATCAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS CAA 90 bp CGGAATGATTCCTCTTCTCTGTGTTTGATAATGCAGGTGGCTTGTTaGGGGCAGTGGCTTTCTGAGACTTTTCCACCAAGGAGTCACCCC +
Preference number: 6 (lower is better)
Translates to: RNDSSSLCLIMQVAC*GQWLSETFPPRSHP
Trigger: GGGGTGACTCCTTGGTGGAAAAGTCTCAGAAAGCCACTGCCCCAAACAAGCCACCTGCATTATCAAACACAGAGAAGAGGAATCATTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239367.7
CDS TCA 72 bp TCTTCCCTGAGGAACTACTATCTGGCATCACAGGAATaGTTTGACTCTCTGGTCCCCAAAAGGCGGAATGAT +
Preference number: 6 (lower is better)
Translates to: SSLRNYYLASQE*FDSLVPKRRND
Trigger: ATCATTCCGCCTTTTGGGGACCAGAGAGTCAAATCATTCCTGTGATGCCAGATAGTAGTTCCTCAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000463728.1
CDS CCA 72 bp ACTACTATCTGGCATCACAGGAATGATTTGACTCTCTaGTCCCCAAAAGGCGGAATGATTCCTCTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: TTIWHHRNDLTL*SPKGGMIPLLC
Trigger: ACAGAGAAGAGGAATCATTCCGCCTTTTGGGGACCAGAGAGTCAAATCATTCCTGTGATGCCAGATAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239367.7
ENST00000463728.1