RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRMDA (Homo sapiens)

Ensembl gene IDs: ENSG00000148655

Ensembl transcript IDs: ENST00000372499.5, ENST00000468134.1, ENST00000483375.1, ENST00000488655.5, ENST00000488759.5, ENST00000493194.2, ENST00000496424.2, ENST00000593699.5, ENST00000593817.1, ENST00000596228.5, ENST00000597823.1, ENST00000611255.5, ENST00000611306.1

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTaGCGAGGTCTCTCCACTCAAGTCAGTGTCCTAGGGGAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: PDIAEATESCRTALN*RGLSTQVSVLGEER
Trigger: TCTTTCCTCCCCTAGGACACTGACTTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp TGTCAGCCCTGTTGCTTTGCCACCGCTGTCTGTCACCCTGGTGGATaGGACCTGCTTAAGGGCAATCATGTCAATCTCTATGTGACCACT +
Preference number: 1 (lower is better)
Translates to: CQPCCFATAVCHPGG*DLLKGNHVNLYVTT
Trigger: AGTGGTCACATAGAGATTGACATGATTGCCCTTAAGCAGGTCTCATCCACCAGGGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp CGAGGTCTCTCCACTCAAGTCAGTGTCCTAGGGGAGGAAAGACAGTaGTGTCAGGCACCACAATCCCCAAAGAACAAGCTCAGTGGAATA +
Preference number: 1 (lower is better)
Translates to: RGLSTQVSVLGEERQ*CQAPQSPKNKLSGI
Trigger: TATTCCACTGAGCTTGTTCTTTGGGGATTGTGGTGCCTGACATCACTGTCTTTCCTCCCCTAGGACACTGACTTGAGTGGAGAGACCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp CTGGTGGATGAGACCTGCTTAAGGGCAATCATGTCAATCTCTATGTaGCCACTCAGTCTAAGGCAGAAGGATCATCTTGACAGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: LVDETCLRAIMSISM*PLSLRQKDHLDRPG
Trigger: GCCAGGCCTGTCAAGATGATCCTTCTGCCTTAGACTGAGTGGTCACATAGAGATTGACATGATTGCCCTTAAGCAGGTCTCATCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp GTCAATCTCTATGTGACCACTCAGTCTAAGGCAGAAGGATCATCTTaGCAGGCCTGGCAAAGTCAGCGGAAGGTACCAAAAGCTGAAGTC +
Preference number: 1 (lower is better)
Translates to: VNLYVTTQSKAEGSS*QAWQSQRKVPKAEV
Trigger: GACTTCAGCTTTTGGTACCTTCCGCTGACTTTGCCAGGCCTGTCAAGATGATCCTTCTGCCTTAGACTGAGTGGTCACATAGAGATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 90 bp TGTGTGGCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTaGACAGAATTCTGGCTGCCCATATTATGCCAGGGAGAAAACATG +
Preference number: 1 (lower is better)
Translates to: CVARLDMTSDSSSCP*TEFWLPILCQGENM
Trigger: CATGTTTTCTCCCTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp ATCATCTTGACAGGCCTGGCAAAGTCAGCGGAAGGTACCAAAAGCTaGAGTCATAGCTTTTCCCAAAGAGAGGCAATGTGGGCTATTGTT +
Preference number: 1 (lower is better)
Translates to: IILTGLAKSAEGTKS*SHSFSQREAMWAIV
Trigger: AACAATAGCCCACATTGCCTCTCTTTGGGAAAAGCTATGACTTCAGCTTTTGGTACCTTCCGCTGACTTTGCCAGGCCTGTCAAGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 90 bp GATATATGTGTGGCTAGATTGGATATGACATCTGACTCGTCTAGCTaGCCTTGCACAGAATTCTGGCTGCCCATATTATGCCAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: DICVARLDMTSDSSS*PCTEFWLPILCQGE
Trigger: TTCTCCCTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCACACATATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp GACCTGGCTGGGAAGTTATACCTTGTTCTCCGAAAAACTGCAAACTaGAATGCACCACCTGTCATAAAATCGATGCTAAAGGAAGGTGGA +
Preference number: 1 (lower is better)
Translates to: DLAGKLYLVLRKTAN*NAPPVIKSMLKEGG
Trigger: TCCACCTTCCTTTAGCATCGATTTTATGACAGGTGGTGCATTTCAGTTTGCAGTTTTTCGGAGAACAAGGTATAACTTCCCAGCCAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CCA 90 bp CCCCTAAACTGTGACTATTTCACTAAAAATAAGCCCACAGCACGATaGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTC +
Preference number: 1 (lower is better)
Translates to: PLNCDYFTKNKPTAR*YQRDFNSIGELRTV
Trigger: GACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCATCGTGCTGTGGGCTTATTTTTAGTGAAATAGTCACAGTTTAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp AAGCCTTTTATAAAGACAAGGATATATGTGTGGCTAGATTGGATATaGCATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: KPFIKTRIYVWLDWI*HLTRLAALAQNSGC
Trigger: GCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCACACATATATCCTTGTCTTTATAAAAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTaGCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTG +
Preference number: 1 (lower is better)
Translates to: KELINKGCVISNRDS*QPQYMSFKACVDSV
Trigger: CACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 90 bp CCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTaGTTTCTGAGAGGTCATGACAAAGATGCAAAATCCAAAAGGTTT +
Preference number: 1 (lower is better)
Translates to: PSIQEDRALSHNLWI*FLRGHDKDAKSKRF
Trigger: AAACCTTTTGGATTTTGCATCTTTGTCATGACCTCTCAGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 90 bp AATTCCTACAGATTTAGGATAAACATGCAACATGGGTTCTACCTCTaGCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGT +
Preference number: 1 (lower is better)
Translates to: NSYRFRINMQHGFYL*QFRPKSSSSTANFG
Trigger: ACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGCAGAGGTAGAACCCATGTTGCATGTTTATCCTAAATCTGTAGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp GGCAGGACCAGGCAATCTATCATGGTGTTCATGCTGTCAGCCCTGTaGCTTTGCCACCGCTGTCTGTCACCCTGGTGGATGAGACCTGCT +
Preference number: 2 (lower is better)
Translates to: GRTRQSIMVFMLSAL*LCHRCLSPWWMRPA
Trigger: AGCAGGTCTCATCCACCAGGGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCATGAACACCATGATAGATTGCCTGGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp AGTCGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTaGAATTGCCGAGGTCTCTCCACTCAAGTCAGTGTCCTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: SRPDIAEATESCRTA*NCRGLSTQVSVLGE
Trigger: CTCCCCTAGGACACTGACTTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAGGGGAGGAAAGACAGTaGTGTCAGGCACCACAATCC +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCRGEERQ*CQAPQS
Trigger: GGATTGTGGTGCCTGACATCACTGTCTTTCCTCCCC...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp GACCAGGCAATCTATCATGGTGTTCATGCTGTCAGCCCTGTTGCTTaGCCACCGCTGTCTGTCACCCTGGTGGATGAGACCTGCTTAAGG +
Preference number: 2 (lower is better)
Translates to: DQAIYHGVHAVSPVA*PPLSVTLVDETCLR
Trigger: CCTTAAGCAGGTCTCATCCACCAGGGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCATGAACACCATGATAGATTGCCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAGCAGAAGGATCATCTTaGCAGGCCTGGCAAAGTCAG +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCRAEGSS*QAWQSQ
Trigger: CTGACTTTGCCAGGCCTGTCAAGATGATCCTTCTGC...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATGTCACCCTGGTGGATaGGACCTGCTTAAGGGCAAT +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCRCHPGG*DLLKGN
Trigger: ATTGCCCTTAAGCAGGTCTCATCCACCAGGGTGACA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAACCTCTGCTCCCCTGTaGGCAGTGGCAGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTTSAPL*AVAGPG
Trigger: GCCTGGTCCTGCCACTGCTCACAGGGGAGCAGAGGT...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACGGGAGGCCCCAGGTGTaGCCTCTGCTCCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHGRPQV*PLLPCE
Trigger: CTCACAGGGGAGCAGAGGTCACACCTGGGGCCTCCC...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGACCAAACCCTCATGCTaGGAAAGATGCCTTATGCCT +
Preference number: 2 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRTKPSC*ERCLMP
Trigger: AGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGGT...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGCTGGTGGATGAGACCTaGTTAAGGGCAATCATGTCA +
Preference number: 2 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRLVDET*LRAIMS
Trigger: TGACATGATTGCCCTTAAGCAGGTCTCATCCACCAG...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp ACAGGGACTCCTGCCAGCCTCAATACATGTCATTCAAGGCCTGTGTaGACTCAGTGGGCCAGAGGCTATGTAAACGGGCTAGAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: TGTPASLNTCHSRPV*TQWARGYVNGLELR
Trigger: TCTCAGCTCTAGCCCGTTTACATAGCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGCAGGAGTCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGACCTCTGCTCCCCTGTaGGCAGTGGCAGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQTSAPL*AVAGPG
Trigger: GCCTGGTCCTGCCACTGCTCACAGGGGAGCAGAGGT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGGGGAGGCCCCAGGTGTaGCCTCTGCTCCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: PTSNDHTYVPCDISASAQGRPQV*PLLPCE
Trigger: CTCACAGGGGAGCAGAGGTCACACCTGGGGCCTCCC...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGCTATCATGGTGTTCATaGTGTCAGCCCTGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRLSWCS*CQPCCF
Trigger: AAAGCAACAGGGCTGACAGCATGAACACCATGATAG...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACCCAGGTGTGACCTCTaGTCCCCTGTGAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTPRCDL*SPVSSG
Trigger: GCCACTGCTCACAGGGGAGCAGAGGTCACACCTGGG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGAAGCCCACAGCACGATaGTATCAGAGGGATTTCAAT +
Preference number: 2 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRKPTAR*YQRDFN
Trigger: ATTGAAATCCCTCTGATACCATCGTGCTGTGGGCTT...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGCGAAAAACTGCAAACTaGAATGCACCACCTGTCATA +
Preference number: 2 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRRKTAN*NAPPVI
Trigger: TATGACAGGTGGTGCATTTCAGTTTGCAGTTTTTCG...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAGATGCTTCTAAACAATaGCCCAGGGTGGGACCAAAT +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCRDASKQ*PRVGPN
Trigger: ATTTGGTCCCACCCTGGGTCATTGTTTAGAAGCATC...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCGGCCACAGGCATCACTaGAAGTGTGTACGGTTAAAA +
Preference number: 2 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGGHRHH*KCVRLK
Trigger: TTTTAACCGTACACACTTCCAGTGATGCCTGTGGCC...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGATTCAAGGCCTGTGTTaGCTCAGTGGGCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWIQGLC*LSGPEA
Trigger: AGCCTCTGGCCCACTGAGTCAACACAGGCCTTGAAT...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGTGCTGTCAGCCCTGTTaGTTTGCCACCGCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWCCQPC*FATAVC
Trigger: ACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCA...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAGAAGGTACCAAAAGCTaGAGTCATAGCTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCREGTKS*SHSFSQ
Trigger: TTGGGAAAAGCTATGACTTCAGCTTTTGGTACCTTC...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCTGTTCTCCGAAAAACTaGAAACTGAAATGCACCACC +
Preference number: 2 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGCSPKN*KLKCTT
Trigger: GGTGGTGCATTTCAGTTTGCAGTTTTTCGGAGAACA...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCCCTTATGCCTTACACTaGATCATATTCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGPYALH*IIFRAR
Trigger: TCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGG...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACATTCAAGGCCTGTGTTaGCTCAGTGGGCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LINKGCVISNRDSCQPQYIQGLC*LSGPEA
Trigger: AGCCTCTGGCCCACTGAGTCAACACAGGCCTTGAAT...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACTGCTGTCAGCCCTGTTaGTTTGCCACCGCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHCCQPC*FATAVC
Trigger: ACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCA...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACGCAGAAGGATCATCTTaGCAGGCCTGGCAAAGTCAG +
Preference number: 2 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHAEGSS*QAWQSQ
Trigger: CTGACTTTGCCAGGCCTGTCAAGATGATCCTTCTGC...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGACAGTCTTTCTCACTTaGCTGCAGCCACTGAGCATG +
Preference number: 2 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKTVFLT*LQPLSM
Trigger: CATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAATTTCTGAGAGGTCATaGCAAAGATGCAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCRISERS*QRCKIQ
Trigger: TTGGATTTTGCATCTTTGTCATGACCTCTCAGAAAT...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATTCTCTTTCAGGTTTTaGTGTCATCAAACTGACCTA +
Preference number: 2 (lower is better)
Translates to: RPDIAEATESCRTALNCRFSFRF*CHQTDL
Trigger: TAGGTCAGTTTGATGACAGCAAAACCTGAAAGAGAA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGTCAAACAGGGACTCCTaGCAGCCTCAATACATGTCA +
Preference number: 2 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWSNRDS*QPQYMS
Trigger: TGACATGTATTGAGGCTGGCAGGAGTCCCTGTTTGA...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCCAGGCAATCTATCATaGTGTTCATGCTGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKPGNLS*CSCCQP
Trigger: GGGCTGACAGCATGAACACCATGATAGATTGCCTGG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCCCCACGCACAAGTATaGCCACAGGCATCACTGGAA +
Preference number: 2 (lower is better)
Translates to: ANSDQSLALAQQILVNTQPHAQV*PQASLE
Trigger: TTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCTCCAAAGCTCACATTaGGGGAGACATTCCTGCGCA +
Preference number: 2 (lower is better)
Translates to: ANSDQSLALAQQILVNTQLQSSH*GRHSCA
Trigger: TGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGGAG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACCTTGCACAGAATTCTaGCTGCCCATATTATGCCAG +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTPCTEF*LPILCQ
Trigger: CTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp CACAGAATTCTGGCTGCCCATATTATGCCAGGGAGAAAACATGTGTaGATGCTTCTAAACAATGACCCAGGGTGGGACCAAATGCAGATA +
Preference number: 2 (lower is better)
Translates to: HRILAAHIMPGRKHV*MLLNNDPGWDQMQI
Trigger: TATCTGCATTTGGTCCCACCCTGGGTCATTGTTTAGAAGCATCAACACATGTTTTCTCCCTGGCATAATATGGGCAGCCAGAATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTTGTCACCCTGGTGGATaGGACCTGCTTAAGGGCAAT +
Preference number: 2 (lower is better)
Translates to: MPYALHCIIFRARSGFRVCHPGG*DLLKGN
Trigger: ATTGCCCTTAAGCAGGTCTCATCCACCAGGGTGACA...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCCAGCCATAAATGTATaGCCTGGCTGGGAAGTTATA +
Preference number: 2 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKPAINV*PGWEVI
Trigger: TATAACTTCCCAGCCAGGTCATACATTTATGGCTGG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACACCAAACCCTCATGCTaGGAAAGATGCCTTATGCCT +
Preference number: 2 (lower is better)
Translates to: LINKGCVISNRDSCQPQYTKPSC*ERCLMP
Trigger: AGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGGT...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACATTGCTGTCATCAAACTaGCCTAATACTGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTLLSSN*PNTGRT
Trigger: TGTCCTCCCAGTATTAGGTCAGTTTGATGACAGCAA...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCCTTATGCCTTACACTaGATCATATTCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWPYALH*IIFRAR
Trigger: TCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGG...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCCAGGCAATCTATCATaGTGTTCATGCTGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: ANSDQSLALAQQILVNTQPGNLS*CSCCQP
Trigger: GGGCTGACAGCATGAACACCATGATAGATTGCCTGG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGGAAGGTACCAAAAGCTaGAGTCATAGCTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKEGTKS*SHSFSQ
Trigger: TTGGGAAAAGCTATGACTTCAGCTTTTGGTACCTTC...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCTGGTGGATGAGACCTaGTTAAGGGCAATCATGTCA +
Preference number: 2 (lower is better)
Translates to: KELINKGCVISNRDSCQPLVDET*LRAIMS
Trigger: TGACATGATTGCCCTTAAGCAGGTCTCATCCACCAG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCGGGAGCTATGTATATaGAGAATACAGGACGTTAAG +
Preference number: 2 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKRELCI*RIQDVK
Trigger: CTTAACGTCCTGTATTCTGCATATACATAGCTCCCG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTTGTTCTCCGAAAAACTaGAAACTGAAATGCACCACC +
Preference number: 2 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISCSPKN*KLKCTT
Trigger: GGTGGTGCATTTCAGTTTGCAGTTTTTCGGAGAACA...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGAATAAGAGTCCCTGGTaGAACCAAACCCTCATGCTG +
Preference number: 2 (lower is better)
Translates to: PTSNDHTYVPCDISASAQNKSPW*NQTLML
Trigger: CAGCATGAGGGTTTGGTTGCACCAGGGACTCTTATT...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGAAGCCCACAGCACGATaGTATCAGAGGGATTTCAAT +
Preference number: 2 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQKPTAR*YQRDFN
Trigger: ATTGAAATCCCTCTGATACCATCGTGCTGTGGGCTT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTATAAATAAGAGTCCCTaGTGCAACCAAACCCTCATG +
Preference number: 2 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISINKSP*CNQTLM
Trigger: CATGAGGGTTTGGTTGCACCAGGGACTCTTATTTAT...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp ACCTCTGCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTaGGTTAACACACAGTGGAACTGTAACCAACCCAGCACTTCATTA +
Preference number: 2 (lower is better)
Translates to: TSANSDQSLALAQQI*VNTQWNCNQPSTSL
Trigger: TAATGAAGTGCTGGGTTGGTTACAGTTCCACTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGCAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCCAGCCATAAATGTATaGCCTGGCTGGGAAGTTATA +
Preference number: 2 (lower is better)
Translates to: KELINKGCVISNRDSCQPPAINV*PGWEVI
Trigger: TATAACTTCCCAGCCAGGTCATACATTTATGGCTGG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGTCTTCTAGAGTGATTTaGCTGGTGCACCAGCAAGTT +
Preference number: 2 (lower is better)
Translates to: ANSDQSLALAQQILVNTQSSRVI*LVHQQV
Trigger: AACTTGCTGGTGCACCAGTCAAATCACTCTAGAAGA...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAAGGACAATGAACACTTaGTCTAAATGGAAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTRTMNT*SKWKKQ
Trigger: CTGCTTCTTCCATTTAGACCAAGTGTTCATTGTCCT...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTATGTCAATCTCTATGTaGCCACTCAGTCTAAGGCAG +
Preference number: 2 (lower is better)
Translates to: MPYALHCIIFRARSGFRVMSISM*PLSLRQ
Trigger: CTGCCTTAGACTGAGTGGTCACATAGAGATTGACAT...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGCGAAAAACTGCAAACTaGAATGCACCACCTGTCATA +
Preference number: 2 (lower is better)
Translates to: PTSNDHTYVPCDISASAQRKTAN*NAPPVI
Trigger: TATGACAGGTGGTGCATTTCAGTTTGCAGTTTTTCG...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAATTTCTGAGAGGTCATaGCAAAGATGCAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTISERS*QRCKIQ
Trigger: TTGGATTTTGCATCTTTGTCATGACCTCTCAGAAAT...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 90 bp AGGGTTAAAGCCTTTTATAAAGACAAGGATATATGTGTGGCTAGATaGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTC +
Preference number: 2 (lower is better)
Translates to: RVKAFYKDKDICVAR*DMTSDSSSCPCTEF
Trigger: GAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCACACATATATCCTTGTCTTTATAAAAGGCTTTAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTGTGGATTTGATTTCTaGGAGGTCATGACAAAGATG +
Preference number: 2 (lower is better)
Translates to: KELINKGCVISNRDSCQPCGFDF*EVMTKM
Trigger: CATCTTTGTCATGACCTCTCAGAAATCAAATCCACA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGAACTCTTTGGTCTGGTaGGTGTTTTCAACAGTCTTA +
Preference number: 2 (lower is better)
Translates to: PTSNDHTYVPCDISASAQNSLVW*VFSTVL
Trigger: TAAGACTGTTGAAAACACCCACCAGACCAAAGAGTT...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACATCTATAAAAACTCTTTaGTCTGGTGGGTGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTSIKTL*SGGCFQ
Trigger: TTGAAAACACCCACCAGACCAAAGAGTTTTTATAGA...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGGAGAAAGATGCCTTATaGCTTACACTGCATCATATT +
Preference number: 2 (lower is better)
Translates to: PTSNDHTYVPCDISASAQEKDAL*LTLHHI
Trigger: AATATGATGCAGTGTAAGGCATAAGGCATCTTTCTC...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR GCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGTTCTCTTTCAGGTTTTaGTGTCATCAAACTGACCTA +
Preference number: 2 (lower is better)
Translates to: ANSDQSLALAQQILVNTQFSFRF*CHQTDL
Trigger: TAGGTCAGTTTGATGACAGCAAAACCTGAAAGAGAA...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGTCAGTATCTATAACTTaGAGGGATTCTCTTTCAGGT +
Preference number: 2 (lower is better)
Translates to: ANSDQSLALAQQILVNTQSVSIT*RDSLSG
Trigger: ACCTGAAAGAGAATCCCTCCAAGTTATAGATACTGA...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp GCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTaGCGAGGTCTCTCCACTCAAGTCAGTGTCCTAGGG +
Preference number: 3 (lower is better)
Translates to: AEATESCRTALN*RGLSTQVSVLG
Trigger: CCCTAGGACACTGACTTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CAA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGACCTCCAAAGCTCACATaGAGGGAGACATTCCTGCGC +
Preference number: 3 (lower is better)
Translates to: RPDIAEATESCRTALNCRPPKLT*RETFLR
Trigger: GCGCAGGAATGTCTCCCTCAATGTGAGCTTTGGAGG...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp GCAGTGGCAGGACCAGGCAATCTATCATGGTGTTCATaGTGTCAGCCCTGTTGCTTTGCCACCGCTGTCTGT +
Preference number: 3 (lower is better)
Translates to: AVAGPGNLSWCS*CQPCCFATAVC
Trigger: ACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCATGAACACCATGATAGATTGCCTGGTCCTGCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CCA 72 bp GCACCCAAAGGAGCAAGCCAGCCCCACGCACAAGTATaGCCACAGGCATCACTGGAAGTGTGTACGGTTAAA +
Preference number: 3 (lower is better)
Translates to: APKGASQPHAQV*PQASLEVCTVK
Trigger: TTTAACCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTGCTCCTTTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp ACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTaGATTGCCGAGGTCTCTCCACTCAAGTCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: TLLRQQRAAGQP*IAEVSPLKSVS
Trigger: GGACACTGACTTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp TCCACTCAAGTCAGTGTCCTAGGGGAGGAAAGACAGTaGTGTCAGGCACCACAATCCCCAAAGAACAAGCTC +
Preference number: 3 (lower is better)
Translates to: STQVSVLGEERQ*CQAPQSPKNKL
Trigger: GAGCTTGTTCTTTGGGGATTGTGGTGCCTGACATCACTGTCTTTCCTCCCCTAGGACACTGACTTGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CAA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGTCAGCCCTGTTGCTTaGCCACCGCTGTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: KELINKGCVISNRDSCQPVSPVA*PPLSVT
Trigger: GGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGAC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp ACAGGCCTGGCAAAGTCAGCGGAAGGTACCAAAAGCTaGAGTCATAGCTTTTCCCAAAGAGAGGCAATGTGG +
Preference number: 3 (lower is better)
Translates to: TGLAKSAEGTKS*SHSFSQREAMW
Trigger: CCACATTGCCTCTCTTTGGGAAAAGCTATGACTTCAGCTTTTGGTACCTTCCGCTGACTTTGCCAGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp TGTTGCTTTGCCACCGCTGTCTGTCACCCTGGTGGATaGGACCTGCTTAAGGGCAATCATGTCAATCTCTAT +
Preference number: 3 (lower is better)
Translates to: CCFATAVCHPGG*DLLKGNHVNLY
Trigger: ATAGAGATTGACATGATTGCCCTTAAGCAGGTCTCATCCACCAGGGTGACAGACAGCGGTGGCAAAGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CCA 72 bp CTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTaGGCCAGAGGCTATGTAAACGGGCTAGAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LNTCHSRPVLTQ*ARGYVNGLELR
Trigger: TCTCAGCTCTAGCCCGTTTACATAGCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CAA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTGTCAGCCCTGTTGCTTaGCCACCGCTGTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: MPYALHCIIFRARSGFRVVSPVA*PPLSVT
Trigger: GGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGAC...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp AGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTaGACAGAATTCTGGCTGCCCATATTATGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: RLDMTSDSSSCP*TEFWLPILCQG
Trigger: TCCCTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp GTGGCTAGATTGGATATGACATCTGACTCGTCTAGCTaGCCTTGCACAGAATTCTGGCTGCCCATATTATGC +
Preference number: 3 (lower is better)
Translates to: VARLDMTSDSSS*PCTEFWLPILC
Trigger: GCATAATATGGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CCA 72 bp ACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTaGCTGCCCATATTATGCCAGGGAGAAAACATGTGT +
Preference number: 3 (lower is better)
Translates to: TSDSSSCPCTEF*LPILCQGENMC
Trigger: ACACATGTTTTCTCCCTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CAA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGACAGTCTTTCTCACTaGACTGCAGCCACTGAGCAT +
Preference number: 3 (lower is better)
Translates to: KELINKGCVISNRDSCQPDSLSH*TAATEH
Trigger: ATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGTC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CAA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGGACAGTCTTTCTCACTaGACTGCAGCCACTGAGCAT +
Preference number: 3 (lower is better)
Translates to: ANSDQSLALAQQILVNTQDSLSH*TAATEH
Trigger: ATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGTC...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp GAGACCTGCTTAAGGGCAATCATGTCAATCTCTATGTaGCCACTCAGTCTAAGGCAGAAGGATCATCTTGAC +
Preference number: 3 (lower is better)
Translates to: ETCLRAIMSISM*PLSLRQKDHLD
Trigger: GTCAAGATGATCCTTCTGCCTTAGACTGAGTGGTCACATAGAGATTGACATGATTGCCCTTAAGCAGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp AGGGATTGTAGCAACATGAAGCCAGCCATAAATGTATaGCCTGGCTGGGAAGTTATACCTTGTTCTCCGAAA +
Preference number: 3 (lower is better)
Translates to: RDCSNMKPAINV*PGWEVIPCSPK
Trigger: TTTCGGAGAACAAGGTATAACTTCCCAGCCAGGTCATACATTTATGGCTGGCTTCATGTTGCTACAATCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp CAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTaGTTTCTGAGAGGTCATGACAAAGATGCAAAATCC +
Preference number: 3 (lower is better)
Translates to: QEDRALSHNLWI*FLRGHDKDAKS
Trigger: GGATTTTGCATCTTTGTCATGACCTCTCAGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR-3UTR CAA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGCTGGGAAGTTATACCTaGTTCTCCGAAAAACTGCAA +
Preference number: 3 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQLGSYT*FSEKLQ
Trigger: TTGCAGTTTTTCGGAGAACAAGGTATAACTTCCCAG...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp ACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTaGATCATATTCAGGGCAAGAAGTGGATTTAGAGTT +
Preference number: 3 (lower is better)
Translates to: TLMLRKMPYALH*IIFRARSGFRV
Trigger: AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp AGATTTAGGATAAACATGCAACATGGGTTCTACCTCTaGCAATTCAGACCAAAGTCTAGCTCTAGCACAGCA +
Preference number: 3 (lower is better)
Translates to: RFRINMQHGFYL*QFRPKSSSSTA
Trigger: TGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGCAGAGGTAGAACCCATGTTGCATGTTTATCCTAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp GTCTCACAACCTGTGGATTTGATTTCTGAGAGGTCATaGCAAAGATGCAAAATCCAAAAGGTTTGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: VSQPVDLISERS*QRCKIQKVCAF
Trigger: GAAGGCACAAACCTTTTGGATTTTGCATCTTTGTCATGACCTCTCAGAAATCAAATCCACAGGTTGTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp ATAAAGACAAGGATATATGTGTGGCTAGATTGGATATaGCATCTGACTCGTCTAGCTGCCCTTGCACAGAAT +
Preference number: 3 (lower is better)
Translates to: IKTRIYVWLDWI*HLTRLAALAQN
Trigger: ATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCACACATATATCCTTGTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CCA 72 bp TGTGACTATTTCACTAAAAATAAGCCCACAGCACGATaGTATCAGAGGGATTTCAATTCAATAGGCGAGCTG +
Preference number: 3 (lower is better)
Translates to: CDYFTKNKPTAR*YQRDFNSIGEL
Trigger: CAGCTCGCCTATTGAATTGAAATCCCTCTGATACCATCGTGCTGTGGGCTTATTTTTAGTGAAATAGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp AGTATCTATAACTTGGAGGGATTCTCTTTCAGGTTTTaGTGTCATCAAACTGACCTAATACTGGGAGGACAA +
Preference number: 3 (lower is better)
Translates to: SIYNLEGFSFRF*CHQTDLILGGQ
Trigger: TTGTCCTCCCAGTATTAGGTCAGTTTGATGACAGCAAAACCTGAAAGAGAATCCCTCCAAGTTATAGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CCA 72 bp GAAAGACCAAAGGGTAAAGGGGGTACAAAACATGTCTaGGCCCTGATTGAATTTATTACTTTCTACTTCTCA +
Preference number: 3 (lower is better)
Translates to: ERPKGKGGTKHV*ALIEFITFYFS
Trigger: TGAGAAGTAGAAAGTAATAAATTCAATCAGGGCCCAGACATGTTTTGTACCCCCTTTACCCTTTGGTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR TCA 72 bp TGCTGTCATCAAACTGACCTAATACTGGGAGGACAATaGACACTTGGTCTAAATGGAAGAAGCAGAAAAATA +
Preference number: 3 (lower is better)
Translates to: CCHQTDLILGGQ*TLGLNGRSRKI
Trigger: TATTTTTCTGCTTCTTCCATTTAGACCAAGTGTTCATTGTCCTCCCAGTATTAGGTCAGTTTGATGACAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR GCA 72 bp ACTGTAACCAACCCAGCACTTCATTATCACTATCCCTaGTTAAGAGAAACAAAGCTGACTATAATTCTATCA +
Preference number: 3 (lower is better)
Translates to: TVTNPALHYHYP*LRETKLTIILS
Trigger: TGATAGAATTATAGTCAGCTTTGTTTCTCTTAAGCAGGGATAGTGATAATGAAGTGCTGGGTTGGTTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGACCTCTGCTCCCCTGTaGGCAGTGGCAGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRTSAPL*AVAGPG
Trigger: GCCTGGTCCTGCCACTGCTCACAGGGGAGCAGAGGT...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGCGTTGCCCAGCAGACTaGGGTACTCCAGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRRCPAD*GTPELV
Trigger: CACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACG...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCCCCAGGTGTGACCTCTaGTCCCCTGTGAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGPRCDL*SPVSSG
Trigger: GCCACTGCTCACAGGGGAGCAGAGGTCACACCTGGG...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGGGGAGGCCCCAGGTGTaGCCTCTGCTCCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWGRPQV*PLLPCE
Trigger: CTCACAGGGGAGCAGAGGTCACACCTGGGGCCTCCC...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTGGGAGGCCCCAGGTGTaGCCTCTGCTCCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISGRPQV*PLLPCE
Trigger: CTCACAGGGGAGCAGAGGTCACACCTGGGGCCTCCC...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGACAGTCTTTCTCACTTaGCTGCAGCCACTGAGCATG +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRTVFLT*LQPLSM
Trigger: CATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGT...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGCCAGGCAATCTATCATaGTGTTCATGCTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRPGNLS*CSCCQP
Trigger: GGGCTGACAGCATGAACACCATGATAGATTGCCTGG...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 72 bp CAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACTaGACTGCAGCCACTGAGCATGTCCAGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QFNRRAEDSLSH*TAATEHVQGGP
Trigger: GGGGCCTCCCTGGACATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCTGTCACCCTGGTGGATaGGACCTGCTTAAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGCHPGG*DLLKGN
Trigger: ATTGCCCTTAAGCAGGTCTCATCCACCAGGGTGACA...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCCAGTCCCTGCCAAGGTaGTCTGGAATTTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGQSLPR*SGISLQ
Trigger: CTGCAGAGAAATTCCAGAGCACCTTGGCAGGGACTG...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGCCTTGCACAGAATTCTaGCTGCCCATATTATGCCAG +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRPCTEF*LPILCQ
Trigger: CTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGG...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 72 bp ATCTATCATGGTGTTCATGCTGTCAGCCCTGTTGCTTaGCCACCGCTGTCTGTCACCCTGGTGGATGAGACC +
Preference number: 4 (lower is better)
Translates to: IYHGVHAVSPVA*PPLSVTLVDET
Trigger: GGTCTCATCCACCAGGGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCATGAACACCATGATAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 72 bp GACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTaGAATTGCCGAGGTCTCTCCACTCAAGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: DIAEATESCRTA*NCRGLSTQVSV
Trigger: GACACTGACTTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAACAGTCTTTCTCACTTaGCTGCAGCCACTGAGCATG +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRTVFLT*LQPLSM
Trigger: CATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGT...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGTCTTCTAGAGTGATTTaGCTGGTGCACCAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRSSRVI*LVHQQV
Trigger: AACTTGCTGGTGCACCAGTCAAATCACTCTAGAAGA...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATCTGACTCGTCTAGCTaGCCTTGCACAGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRSDSSS*PCTEFW
Trigger: CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGTTAAGGTATGCAGTCTaGGTAACCCTGGCAACACAA +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRLRYAV*VTLATQ
Trigger: TTGTGTTGCCAGGGTTACCCAGACTGCATACCTTAA...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611255.5
3UTR CAA 72 bp CCTGCCAGCCTCAATACATGTCATTCAAGGCCTGTGTaGACTCAGTGGGCCAGAGGCTATGTAAACGGGCTA +
Preference number: 4 (lower is better)
Translates to: PASLNTCHSRPV*TQWARGYVNGL
Trigger: TAGCCCGTTTACATAGCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCCCAGGACACCTTGGTaGCTGGTGAGTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWPRTPW*LVSSLE
Trigger: TTCCAGGGAACTCACCAGTCACCAAGGTGTCCTGGG...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCACCAAACCCTCATGCTaGGAAAGATGCCTTATGCCT +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGTKPSC*ERCLMP
Trigger: AGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGGT...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCGAACATCTTCTAGAGTaGTTTGACTGGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGEHLLE*FDWCTS
Trigger: GCTGGTGCACCAGTCAAATCACTCTAGAAGATGTTC...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACCCAGGAGGCGGAGCTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHPGGGA*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAAGCTCCGCCTCCTGG...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCTCAAACAGGGACTCCTaGCAGCCTCAATACATGTCA +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGSNRDS*QPQYMS
Trigger: TGACATGTATTGAGGCTGGCAGGAGTCCCTGTTTGA...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCAGTTGGCTTCAGAGCTaGTCATCTCGGATAAACCTG +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGSWLQS*SSRINL
Trigger: CAGGTTTATCCGAGATGACCAGCTCTGAAGCCAACT...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGATAAATAAGAGTCCCTaGTGCAACCAAACCCTCATG +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRINKSP*CNQTLM
Trigger: CATGAGGGTTTGGTTGCACCAGGGACTCTTATTTAT...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCCCAGGACACCTTGGTaGCTGGTGAGTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKPRTPW*LVSSLE
Trigger: TTCCAGGGAACTCACCAGTCACCAAGGTGTCCTGGG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTACCTCTGCTCCCCTGTaGGCAGTGGCAGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVTSAPL*AVAGPG
Trigger: GCCTGGTCCTGCCACTGCTCACAGGGGAGCAGAGGT...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATCTTCTAGAGTGATTTaGCTGGTGCACCAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRSSRVI*LVHQQV
Trigger: AACTTGCTGGTGCACCAGTCAAATCACTCTAGAAGA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATTGCTGTCATCAAACTaGCCTAATACTGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRLLSSN*PNTGRT
Trigger: TGTCCTCCCAGTATTAGGTCAGTTTGATGACAGCAA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATGGCTAGATTGGATATaGCATCTGACTCGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRWLDWI*HLTRLA
Trigger: AGCTAGACGAGTCAGATGTCATATCCAATCTAGCCA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGGCTGCAGGACAGCCTTaGATTGCCGAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKAAGQP*IAEVSP
Trigger: TGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGC...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCGAAGGTACCAAAAGCTaGAGTCATAGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGEGTKS*SHSFSQ
Trigger: TTGGGAAAAGCTATGACTTCAGCTTTTGGTACCTTC...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGTGTCTGGGCCCTGATTaGATTTATTACTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRCLGPD*IYYFLL
Trigger: AAGTAGAAAGTAATAAATTCAATCAGGGCCCAGACA...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACGCTGCAGGACAGCCTTaGATTGCCGAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYAAGQP*IAEVSP
Trigger: TGGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGC...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGACAGATTAAGGTGCCATaGCTTTCAGTAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRQIKVP*LSVKQE
Trigger: CTCTTGCTTTACTGAAAGGCATGGCACCTTAATCTG...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR GCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGTCGTCTAGCTGCCCTTaGACAGAATTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKSSSCP*TEFWLP
Trigger: GGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGA...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGGAGGTACTCCAGAGCTaGTGTCACTTCTGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWEVLQS*CHFCQV
Trigger: CACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTC...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCAAGGTATACAGAAGTTaGCTTCAGAGCTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGKVYRS*LQSWSS
Trigger: AGATGACCAGCTCTGAAGCCAACTTCTGTATACCTT...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCACAGCAGAGGCTGGTaGGGAGGGGAGGATTATGTC +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYHSRGW*GGEDYV
Trigger: GACATAATCCTCCCCTCCCCACCAGCCTCTGCTGTG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGGGAGGCCGAGACGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQGGRDG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCGTCTCGGCCTCC...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGTTCCTCCAGGCTCCTaGATGCGCTCAGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPVPPGS*MRSVLP
Trigger: TGGAAGGACTGAGCGCATTCAGGAGCCTGGAGGAAC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCACCTTGGTGACTGGTaGGTTCCCTGGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYHLGDW*VPWKQK
Trigger: CTTCTGCTTCCAGGGAACTCACCAGTCACCAAGGTG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGCACCTTGGTGACTGGTaGGTTCCCTGGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQHLGDW*VPWKQK
Trigger: CTTCTGCTTCCAGGGAACTCACCAGTCACCAAGGTG...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTTGTCACCCTGGTGGATaGGACCTGCTTAAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISCHPGG*DLLKGN
Trigger: ATTGCCCTTAAGCAGGTCTCATCCACCAGGGTGACA...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGATTCAAGGCCTGTGTTaGCTCAGTGGGCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQIQGLC*LSGPEA
Trigger: AGCCTCTGGCCCACTGAGTCAACACAGGCCTTGAAT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCTCCAAAGCTCACATTaGGGGAGACATTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKLQSSH*GRHSCA
Trigger: TGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGGAG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTCTCCAAAGCTCACATTaGGGGAGACATTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISLQSSH*GRHSCA
Trigger: TGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGGAG...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACTCGTCTAGCTGCCCTTaGACAGAATTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHSSSCP*TEFWLP
Trigger: GGGCAGCCAGAATTCTGTGCAAGGGCAGCTAGACGA...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGCCCCACGCACAAGTATaGCCACAGGCATCACTGGAA +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQPHAQV*PQASLE
Trigger: TTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGG...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCAGGACAATGAACACTTaGTCTAAATGGAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGRTMNT*SKWKKQ
Trigger: CTGCTTCTTCCATTTAGACCAAGTGTTCATTGTCCT...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTCCTGCCAAGGTGCTCTaGAATTTCTCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISPAKVL*NFSAVL
Trigger: CAGGACTGCAGAGAAATTCCAGAGCACCTTGGCAGG...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
3UTR CAA 72 bp CTGGCTGCCCATATTATGCCAGGGAGAAAACATGTGTaGATGCTTCTAAACAATGACCCAGGGTGGGACCAA +
Preference number: 4 (lower is better)
Translates to: LAAHIMPGRKHV*MLLNNDPGWDQ
Trigger: TTGGTCCCACCCTGGGTCATTGTTTAGAAGCATCAACACATGTTTTCTCCCTGGCATAATATGGGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGCATCCTTTTCCAAGCTaGCCAGCTCGTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQHPFPS*PARWDR
Trigger: CCTGTCCCAACGAGCTGGTCAGCTTGGAAAAGGATG...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCAAGTTAGATAAACTTTaGGTCACCCAACTAGCAATG +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGKLDKL*VTQLAM
Trigger: CATTGCTAGTTGGGTGACTCAAAGTTTATCTAACTT...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGGGGAGGAAAGACAGTaGTGTCAGGCACCACAATCC +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPGEERQ*CQAPQS
Trigger: GGATTGTGGTGCCTGACATCACTGTCTTTCCTCCCC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGGCTCAGTCCTTCCAGTaGCCTCAGAAGGTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKAQSFQ*PQKVKA
Trigger: AGCTTTAACCTTCTGAGGTCACTGGAAGGACTGAGC...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTGCTGTCAGCCCTGTTaGTTTGCCACCGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPCCQPC*FATAVC
Trigger: ACAGACAGCGGTGGCAAAGCAACAGGGCTGACAGCA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCGAGAAAGATGCCTTATaGCTTACACTGCATCATATT +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGEKDAL*LTLHHI
Trigger: AATATGATGCAGTGTAAGGCATAAGGCATCTTTCTC...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCTTCTCTTTCAGGTTTTaGTGTCATCAAACTGACCTA +
Preference number: 4 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGFSFRF*CHQTDL
Trigger: TAGGTCAGTTTGATGACAGCAAAACCTGAAAGAGAA...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGAGGCAACAGAGAGCTaGAGGACAGCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQEATES*RTALNC
Trigger: GCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTC...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAGCTCTGGAATTTCTCTaGAGTCCTGGCCTATGTAGG +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTALEFL*SPGLCR
Trigger: CCTACATAGGCCAGGACTGCAGAGAAATTCCAGAGC...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCCCCACGCACAAGTATaGCCACAGGCATCACTGGAA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPPHAQV*PQASLE
Trigger: TTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGAGGTCGTCCCCCAGCTaGTTGTTGTCCAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQRSSPS*LLSKMS
Trigger: ACTCATCTTGGACAACAATCAGCTGGGGGACGACCT...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR TCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACGTCACTTCTGCCAAGTaGTCCAGCAGGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHVTSAK*SSRFSK
Trigger: TTTGGAGAACCTGCTGGATCACTTGGCAGAAGTGAC...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACGCTGAGCGAGGGAGCTaGAGGGTAATTCAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYAERGS*RVIQVR
Trigger: TCTTACTTGAATTACCCTTCAGCTCCCTCGCTCAGC...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGCAGAAGGATCATCTTaGCAGGCCTGGCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPAEGSS*QAWQSQ
Trigger: CTGACTTTGCCAGGCCTGTCAAGATGATCCTTCTGC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGGCAGAAGGATCATCTTaGCAGGCCTGGCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQAEGSS*QAWQSQ
Trigger: CTGACTTTGCCAGGCCTGTCAAGATGATCCTTCTGC...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTGAACATCTTCTAGAGTaGTTTGACTGGTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISEHLLE*FDWCTS
Trigger: GCTGGTGCACCAGTCAAATCACTCTAGAAGATGTTC...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGTTGCTGTCATCAAACTaGCCTAATACTGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWLLSSN*PNTGRT
Trigger: TGTCCTCCCAGTATTAGGTCAGTTTGATGACAGCAA...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAGATGCTTCTAAACAATaGCCCAGGGTGGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTDASKQ*PRVGPN
Trigger: ATTTGGTCCCACCCTGGGTCATTGTTTAGAAGCATC...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACTGGTGGATGAGACCTaGTTAAGGGCAATCATGTCA +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTLVDET*LRAIMS
Trigger: TGACATGATTGCCCTTAAGCAGGTCTCATCCACCAG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCTGGTGGATGAGACCTaGTTAAGGGCAATCATGTCA +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKLVDET*LRAIMS
Trigger: TGACATGATTGCCCTTAAGCAGGTCTCATCCACCAG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACAGGACAGCCTTGAATTaGCGAGGTCTCTCCACTCAA +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHRTALN*RGLSTQ
Trigger: TTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCT...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGAGGACAGCCTTGAATTaGCGAGGTCTCTCCACTCAA +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQRTALN*RGLSTQ
Trigger: TTGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAGGCCACAGGCATCACTaGAAGTGTGTACGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTGHRHH*KCVRLK
Trigger: TTTTAACCGTACACACTTCCAGTGATGCCTGTGGCC...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATCTATAAAAACTCTTTaGTCTGGTGGGTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RPDIAEATESCRTALNCRSIKTL*SGGCFQ
Trigger: TTGAAAACACCCACCAGACCAAAGAGTTTTTATAGA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGCCTGTGTTGACTCAGTaGGCCAGAGGCTATGTAAAC +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQPVLTQ*ARGYVN
Trigger: GTTTACATAGCCTCTGGCCCACTGAGTCAACACAGG...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCCATTTGTTTCTATCTaGTCTACAGGGGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYPFVSI*STGGPV
Trigger: AACTGGGCCCCCTGTAGATCAGATAGAAACAAATGG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR TCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACCAGCCATAAATGTATaGCCTGGCTGGGAAGTTATA +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTPAINV*PGWEVI
Trigger: TATAACTTCCCAGCCAGGTCATACATTTATGGCTGG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGATGCTTCTAAACAATaGCCCAGGGTGGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQDASKQ*PRVGPN
Trigger: ATTTGGTCCCACCCTGGGTCATTGTTTAGAAGCATC...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCTCAGACATGCAGCCTaGTCAAGTGATAATCTCTTA +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWLRHAA*SSDNLL
Trigger: TAAGAGATTATCACTTGATCAGGCTGCATGTCTGAG...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTTGAGGGTTAAGGTATaGAGTCTGGGTAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPLRVKV*SLGNPG
Trigger: GCCAGGGTTACCCAGACTGCATACCTTAACCCTCAA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR GCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGAGCTGGTGTCACTTCTaGCAAGTGATCCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQSWCHF*QVIQQV
Trigger: AACCTGCTGGATCACTTGGCAGAAGTGACACCAGCT...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR GCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTCTATCATGGTGTTCATaGTGTCAGCCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISLSWCS*CQPCCF
Trigger: AAAGCAACAGGGCTGACAGCATGAACACCATGATAG...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACAATAAGAGTCCCTGGTaGAACCAAACCCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYNKSPW*NQTLML
Trigger: CAGCATGAGGGTTTGGTTGCACCAGGGACTCTTATT...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGAATAAGAGTCCCTGGTaGAACCAAACCCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQNKSPW*NQTLML
Trigger: CAGCATGAGGGTTTGGTTGCACCAGGGACTCTTATT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACATGGCTGCCCATATTATaGCAGGGAGAAAACATGTGT +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTWLPIL*QGENMC
Trigger: ACACATGTTTTCTCCCTGGCATAATATGGGCAGCCA...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGCACAGAATTCTGGCTaGCCATATTATGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPAQNSG*PYYARE
Trigger: CTCCCTGGCATAATATGGGCAGCCAGAATTCTGTGC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGCATGGGTTCTACCTCTaGCAATTCAGACCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKHGFYL*QFRPKS
Trigger: AGACTTTGGTCTGAATTGGCAGAGGTAGAACCCATG...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTGAGGCAACAGAGAGCTaGAGGACAGCCTTGAATTGC +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVEATES*RTALNC
Trigger: GCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTC...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGAGAAAAAGATCCCAATaGAGAAGAGGTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWRKRSQ*RRGQSL
Trigger: CAGACTCTGACCTCTTCTCCATTGGGATCTTTTTCT...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGTTCAACACGAAAGTGTaGGCCACATTGCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQFNTKV*ATLPES
Trigger: GGATTCTGGCAATGTGGCCCACACTTTCGTGTTGAA...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACGGCCACAGGCATCACTaGAAGTGTGTACGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHGHRHH*KCVRLK
Trigger: TTTTAACCGTACACACTTCCAGTGATGCCTGTGGCC...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGAACAATGACCCAGGGTaGGACCAAATGCAGATAATT +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWNNDPG*DQMQII
Trigger: AATTATCTGCATTTGGTCCCACCCTGGGTCATTGTT...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGATGTCAATCTCTATGTaGCCACTCAGTCTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQMSISM*PLSLRQ
Trigger: CTGCCTTAGACTGAGTGGTCACATAGAGATTGACAT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACGAAAAACTGCAAACTaGAATGCACCACCTGTCATA +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTRKTAN*NAPPVI
Trigger: TATGACAGGTGGTGCATTTCAGTTTGCAGTTTTTCG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCAGATGGAGGGTTTATaGGTGAGGCTGGTAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYQMEGL*VRLVKV
Trigger: TACTTTTACCAGCCTCACTCATAAACCCTCCATCTG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGTGGGCCACATTaGCAGAATCCAAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKKCGPH*QNPKVK
Trigger: CTTTACTTTTGGATTCTGGCAATGTGGCCCACACTT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR GCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCTATCATGGTGTTCATaGTGTCAGCCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYLSWCS*CQPCCF
Trigger: AAAGCAACAGGGCTGACAGCATGAACACCATGATAG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTCAAACAGGGACTCCTaGCAGCCTCAATACATGTCA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPSNRDS*QPQYMS
Trigger: TGACATGTATTGAGGCTGGCAGGAGTCCCTGTTTGA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGTGTCTGGTTACTTTCTaGGCATCCAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWCLVTF*ASRNFK
Trigger: CTTGAAATTTCTGGATGCCCAGAAAGTAACCAGACA...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGGTATACAGAAGTTaGCTTCAGAGCTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKKVYRS*LQSWSS
Trigger: AGATGACCAGCTCTGAAGCCAACTTCTGTATACCTT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTATTCAAGTAAGAAGCTaGTCACAGCAGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPIQVRS*SQQRLV
Trigger: CACCAGCCTCTGCTGTGACCAGCTTCTTACTTGAAT...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGGAAGAGGTCAGAGTCTaGGCAAATGCTGAGCATGAA +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQEEVRV*ANAEHE
Trigger: TTCATGCTCAGCATTTGCCCAGACTCTGACCTCTTC...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTCCTGTGTTGACTCAGTaGGCCAGAGGCTATGTAAAC +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVPVLTQ*ARGYVN
Trigger: GTTTACATAGCCTCTGGCCCACTGAGTCAACACAGG...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGCCTTGCACAGAATTCTaGCTGCCCATATTATGCCAG +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQPCTEF*LPILCQ
Trigger: CTGGCATAATATGGGCAGCCAGAATTCTGTGCAAGG...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGAATAAGAAAGCCTTTTaGAGGCAATGGCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQNKKAF*RQWPRA
Trigger: AGCTCTGGGCCATTGCCTTCAAAAGGCTTTCTTATT...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGAAGGTACCAAAAGCTaGAGTCATAGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQEGTKS*SHSFSQ
Trigger: TTGGGAAAAGCTATGACTTCAGCTTTTGGTACCTTC...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTACCAAACCCTCATGCTaGGAAAGATGCCTTATGCCT +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVTKPSC*ERCLMP
Trigger: AGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGGT...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGATTTCTGAGAGGTCATaGCAAAGATGCAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWISERS*QRCKIQ
Trigger: TTGGATTTTGCATCTTTGTCATGACCTCTCAGAAAT...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGATACTGGGAGGACAATaGACACTTGGTCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQILGGQ*TLGLNG
Trigger: TCCATTTAGACCAAGTGTTCATTGTCCTCCCAGTAT...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACATACTGGGAGGACAATaGACACTTGGTCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: LINKGCVISNRDSCQPQYILGGQ*TLGLNG
Trigger: TCCATTTAGACCAAGTGTTCATTGTCCTCCCAGTAT...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGTGGCTAGATTGGATATaGCATCTGACTCGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQWLDWI*HLTRLA
Trigger: AGCTAGACGAGTCAGATGTCATATCCAATCTAGCCA...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAGATGGAGGGTTTATaGGTGAGGCTGGTAAAAGTA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPQMEGL*VRLVKV
Trigger: TACTTTTACCAGCCTCACTCATAAACCCTCCATCTG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACCGGGAGCTATGTATATaGAGAATACAGGACGTTAAG +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHRELCI*RIQDVK
Trigger: CTTAACGTCCTGTATTCTGCATATACATAGCTCCCG...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGTGGCTGCCCATATTATaGCAGGGAGAAAACATGTGT +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQWLPIL*QGENMC
Trigger: ACACATGTTTTCTCCCTGGCATAATATGGGCAGCCA...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCATGGGTTCTACCTCTaGCAATTCAGACCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPHGFYL*QFRPKS
Trigger: AGACTTTGGTCTGAATTGGCAGAGGTAGAACCCATG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTAATGTCCACAGTCCCTaGCAAGGTGCTCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVNVHSP*QGALEF
Trigger: AAATTCCAGAGCACCTTGGCAGGGACTGTGGACATT...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTCCAGAAATTTCAAGTTaGGCAGCTTGTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISPEISS*AACTEQ
Trigger: TTGTTCTGTACAAGCTGCCCAACTTGAAATTTCTGG...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGAAGCCCACAGCACGATaGTATCAGAGGGATTTCAAT +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQKPTAR*YQRDFN
Trigger: ATTGAAATCCCTCTGATACCATCGTGCTGTGGGCTT...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAACTCTTTGGTCTGGTaGGTGTTTTCAACAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKNSLVW*VFSTVL
Trigger: TAAGACTGTTGAAAACACCCACCAGACCAAAGAGTT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTAACTCTTTGGTCTGGTaGGTGTTTTCAACAGTCTTA +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISNSLVW*VFSTVL
Trigger: TAAGACTGTTGAAAACACCCACCAGACCAAAGAGTT...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACAGAGAGGGAAACAATGTaGTCAATAACTCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTERETM*SITHSK
Trigger: TTTGGAGTGAGTTATTGACCACATTGTTTCCCTCTC...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGGGTACAAAACATGTCTaGGCCCTGATTGAATTTATT +
Preference number: 4 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWGTKHV*ALIEFI
Trigger: AATAAATTCAATCAGGGCCCAGACATGTTTTGTACC...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 72 bp AGCCATAAATGTATGACCTGGCTGGGAAGTTATACCTaGTTCTCCGAAAAACTGCAAACTGAAATGCACCAC +
Preference number: 4 (lower is better)
Translates to: SHKCMTWLGSYT*FSEKLQTEMHH
Trigger: GTGGTGCATTTCAGTTTGCAGTTTTTCGGAGAACAAGGTATAACTTCCCAGCCAGGTCATACATTTATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 72 bp GCCTTTTATAAAGACAAGGATATATGTGTGGCTAGATaGGATATGACATCTGACTCGTCTAGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AFYKDKDICVAR*DMTSDSSSCPC
Trigger: GCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGCCACACATATATCCTTGTCTTTATAAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
3UTR CAA 72 bp AATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTaGGTTAACACACAGTGGAACTGTAACCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: NSDQSLALAQQI*VNTQWNCNQPS
Trigger: GCTGGGTTGGTTACAGTTCCACTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCGAAAAACTGCAAACTaGAATGCACCACCTGTCATA +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQRKTAN*NAPPVI
Trigger: TATGACAGGTGGTGCATTTCAGTTTGCAGTTTTTCG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTATTTCTGAGAGGTCATaGCAAAGATGCAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISISERS*QRCKIQ
Trigger: TTGGATTTTGCATCTTTGTCATGACCTCTCAGAAAT...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGTGTGGATTTGATTTCTaGGAGGTCATGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQCGFDF*EVMTKM
Trigger: CATCTTTGTCATGACCTCTCAGAAATCAAATCCACA...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTTAGATAAACTTTaGGTCACCCAACTAGCAATG +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKKLDKL*VTQLAM
Trigger: CATTGCTAGTTGGGTGACTCAAAGTTTATCTAACTT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAACATGTCTGGGCCCTaGTTGAATTTATTACTTTCT +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKNMSGP*LNLLLS
Trigger: AGAAAGTAATAAATTCAATCAGGGCCCAGACATGTT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCTCAGACATGCAGCCTaGTCAAGTGATAATCTCTTA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPLRHAA*SSDNLL
Trigger: TAAGAGATTATCACTTGATCAGGCTGCATGTCTGAG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGTGTTCTCCGAAAAACTaGAAACTGAAATGCACCACC +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQCSPKN*KLKCTT
Trigger: GGTGGTGCATTTCAGTTTGCAGTTTTTCGGAGAACA...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTGTTCTCCGAAAAACTaGAAACTGAAATGCACCACC +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPCSPKN*KLKCTT
Trigger: GGTGGTGCATTTCAGTTTGCAGTTTTTCGGAGAACA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGCCTTATGCCTTACACTaGATCATATTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQPYALH*IIFRAR
Trigger: TCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGG...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACATTCTCTTTCAGGTTTTaGTGTCATCAAACTGACCTA +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTFSFRF*CHQTDL
Trigger: TAGGTCAGTTTGATGACAGCAAAACCTGAAAGAGAA...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACATTATCACTATCCCTaGTTAAGAGAAACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTHYHYP*LRETKL
Trigger: CAGCTTTGTTTCTCTTAAGCAGGGATAGTGATAATG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTATAAATAAGAGTCCCTaGTGCAACCAAACCCTCATG +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPINKSP*CNQTLM
Trigger: CATGAGGGTTTGGTTGCACCAGGGACTCTTATTTAT...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACAGGACAATGAACACTTaGTCTAAATGGAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHRTMNT*SKWKKQ
Trigger: CTGCTTCTTCCATTTAGACCAAGTGTTCATTGTCCT...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGAACAATGACCCAGGGTaGGACCAAATGCAGATAATT +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQNNDPG*DQMQII
Trigger: AATTATCTGCATTTGGTCCCACCCTGGGTCATTGTT...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTTTGGTTAACACACAGTaGAACTGTAACCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVLVNTQ*NCNQPS
Trigger: GCTGGGTTGGTTACAGTTCCACTGTGTGTTAACCAA...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGTGTGGATTTGATTTCTaGGAGGTCATGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQCGFDF*EVMTKM
Trigger: CATCTTTGTCATGACCTCTCAGAAATCAAATCCACA...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTCGGGAGCTATGTATATaGAGAATACAGGACGTTAAG +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVRELCI*RIQDVK
Trigger: CTTAACGTCCTGTATTCTGCATATACATAGCTCCCG...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACGAGAAAGATGCCTTATaGCTTACACTGCATCATATT +
Preference number: 4 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHEKDAL*LTLHHI
Trigger: AATATGATGCAGTGTAAGGCATAAGGCATCTTTCTC...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGGAGAGGGAAACAATGTaGTCAATAACTCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQERETM*SITHSK
Trigger: TTTGGAGTGAGTTATTGACCACATTGTTTCCCTCTC...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAAGAACAAGCTCAGTaGAATAGGATAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PHAEKDALCLTLHHIQGKKEQAQ*NRIKGR
Trigger: TCTTCCTTTTATCCTATTCCACTGAGCTTGTTCTTT...CTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGAATAATAGACAGGTTTaGAAGCAGGAACAGCCATAT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQNNRQV*KQEQPY
Trigger: ATATGGCTGTTCCTGCTTTCAAACCTGTCTATTATT...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTAGACTTGCCATCTTCTaGAGGATTAAGTTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPRLAIF*RIKLEK
Trigger: TTTCTCTAACTTAATCCTTCAGAAGATGGCAAGTCT...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR TCA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGTGTCTGGGCCCTGATTaGATTTATTACTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: ANSDQSLALAQQILVNTQCLGPD*IYYFLL
Trigger: AAGTAGAAAGTAATAAATTCAATCAGGGCCCAGACA...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR TCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTAACATGTCTGGGCCCTaGTTGAATTTATTACTTTCT +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPNMSGP*LNLLLS
Trigger: AGAAAGTAATAAATTCAATCAGGGCCCAGACATGTT...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR GCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCATTATCACTATCCCTaGTTAAGAGAAACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPHYHYP*LRETKL
Trigger: CAGCTTTGTTTCTCTTAAGCAGGGATAGTGATAATG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTCAGTATCTATAACTTaGAGGGATTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPSVSIT*RDSLSG
Trigger: ACCTGAAAGAGAATCCCTCCAAGTTATAGATACTGA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTGGTACAAAACATGTCTaGGCCCTGATTGAATTTATT +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPGTKHV*ALIEFI
Trigger: AATAAATTCAATCAGGGCCCAGACATGTTTTGTACC...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTTCTATAAAAACTCTTTaGTCTGGTGGGTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KELINKGCVISNRDSCQPSIKTL*SGGCFQ
Trigger: TTGAAAACACCCACCAGACCAAAGAGTTTTTATAGA...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTTCAGTATCTATAACTTaGAGGGATTCTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MPYALHCIIFRARSGFRVSVSIT*RDSLSG
Trigger: ACCTGAAAGAGAATCCCTCCAAGTTATAGATACTGA...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CCA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGAAAGAACAAGCTCAGTaGAATAGGATAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PTSNDHTYVPCDISASAQKEQAQ*NRIKGR
Trigger: TCTTCCTTTTATCCTATTCCACTGAGCTTGTTCTTT...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS GCA 90 bp CTTGAGTTCCACGCACCACGAGCCCGGCCATGGCGGCCAGGACGCTaGGGGCGCGCGGGACGGAGCGCGGGGGCGCGGCGGCAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LEFHAPRARPWRPGR*GRAGRSAGARRQQR
Trigger: CCGCTGCTGCCGCCGCGCCCCCGCGCTCCGTCCCGCGCGCCCGCAGCGTCCTGGCCGCCATGGCCGGGCTCGTGGTGCGTGGAACTCAAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGGTCAGCCCTGTTGCTTaGCCACCGCTGTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRVSPVA*PPLSVT
Trigger: GGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGAC...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGATTGGGACAGGCCACGTaGCCCAGCAGACTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RPDIAEATESCRTALNCRLGQAT*PSRLRY
Trigger: GTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAA...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp CGTCCTGACATTGCTGAGGCAACAGAGAGCTGCAGGACAGCCTTGAATTGCCGAAGCTGCAGGACAGCCTaGAATTGCCGAGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RPDIAEATESCRTALNCRSCRTA*NCRGLS
Trigger: GGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCT...TCGGCAATTCAAGGCTGTCCTGCAGCTCTCTGTTGCCTCAGCAATGTCAGGACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS TCA 90 bp GTATGCAGTCTGGGTAACCCTGGCAACACAAGGTCGTCCCCCAGCTaGTTGTTGTCCAAGATGAGTTCCTCCAGGCTCCTGAATGCGCTC +
Preference number: 5 (lower is better)
Translates to: VCSLGNPGNTRSSPS*LLSKMSSSRLLNAL
Trigger: GAGCGCATTCAGGAGCCTGGAGGAACTCATCTTGGACAACAATCAGCTGGGGGACGACCTTGTGTTGCCAGGGTTACCCAGACTGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000593817.1
ENST00000611255.5
ENST00000611306.1
CDS CCA 90 bp GTTGGGACAGGCCACGTTGCCCAGCAGACTGAGGTACTCCAGAGCTaGTGTCACTTCTGCCAAGTGATCCAGCAGGTTCTCCAAATCAGT +
Preference number: 5 (lower is better)
Translates to: VGTGHVAQQTEVLQS*CHFCQVIQQVLQIS
Trigger: ACTGATTTGGAGAACCTGCTGGATCACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS TCA 90 bp GGCACAATCCTTGAGGGTAACCAGGGACTGCTCACAAGGTCACAGTaGGGAAAATTCCCAGCCAGGGCTTATGGAGGGTTCAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: GTILEGNQGLLTRSQ*GKFPARAYGGFRPG
Trigger: TCCTGGTCTGAACCCTCCATAAGCCCTGGCTGGGAATTTTCCTCACTGTGACCTTGTGAGCAGTCCCTGGTTACCCTCAAGGATTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS TCA 90 bp TTCTTGATGGCTACACTGAGCAGATGCCACTGTTGGCAAGAGGCATaGGAGCAACAGCAGGTACTCCACGGCTTTGGGGGCAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: FLMATLSRCHCWQEA*EQQQVLHGFGGKGK
Trigger: TTTTCCCTTGCCCCCAAAGCCGTGGAGTACCTGCTGTTGCTCTCATGCCTCTTGCCAACAGTGGCATCTGCTCAGTGTAGCCATCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372499.5
CDS TCA 90 bp TCAGGGCTGGGGCTGCCTTTTCCCACCTCTAACTTCCAAGATCAGTaGCAAGAGGTGCTTGGCGAAGAAGATGAGGAGGAAGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: SGLGLPFPTSNFQDQ*QEVLGEEDEEEASQ
Trigger: CTGAGATGCTTCCTCCTCATCTTCTTCGCCAAGCACCTCTTGTCACTGATCTTGGAAGTTAGAGGTGGGAAAAGGCAGCCCCAGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488759.5
CDS TCA 90 bp AGCCTTTTGAAGGCAATGGCCCAGAGCTTCCCATTTGTTTCTATCTaGTCTACAGGGGGCCCAGTTCTGCCAGTGCCCACAGTGGCATCT +
Preference number: 5 (lower is better)
Translates to: SLLKAMAQSFPFVSI*STGGPVLPVPTVAS
Trigger: AGATGCCACTGTGGGCACTGGCAGAACTGGGCCCCCTGTAGATCAGATAGAAACAAATGGGAAGCTCTGGGCCATTGCCTTCAAAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CAA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGGTGATTCGGTTCTTGTaGAGGGTTAAGGTATGCAGT +
Preference number: 5 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRVIRFL*RVKVCS
Trigger: ACTGCATACCTTAACCCTCAACAAGAACCGAATCAC...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGGTCAGCCCTGTTGCTTaGCCACCGCTGTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWVSPVA*PPLSVT
Trigger: GGTGACAGACAGCGGTGGCAAAGCAACAGGGCTGAC...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCTCAGATCAAGCCTCTTaGCGAAATGTCCACAGTCCC +
Preference number: 5 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGSDQAS*RNVHSP
Trigger: GGGACTGTGGACATTTCGCAAAGAGGCTTGATCTGA...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS TCA 90 bp CCCAGCAGACTGAGGTACTCCAGAGCTGGTGTCACTTCTGCCAAGTaGTCCAGCAGGTTCTCCAAATCAGTGATTCGGTTCTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PSRLRYSRAGVTSAK*SSRFSKSVIRFLLR
Trigger: CCTCAACAAGAACCGAATCACTGATTTGGAGAACCTGCTGGATCACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS TCA 90 bp TCCCCAGGACACCTGCCTTTTCCCACCTCTAACTTCCAAGATCAGTaGCAAGAGGTGCTTGGCGAAGAAGATGAGGAGGAAGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: SPGHLPFPTSNFQDQ*QEVLGEEDEEEASQ
Trigger: CTGAGATGCTTCCTCCTCATCTTCTTCGCCAAGCACCTCTTGTCACTGATCTTGGAAGTTAGAGGTGGGAAAAGGCAGGTGTCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483375.1
ENST00000596228.5
ENST00000597823.1
CDS CCA 90 bp ACTCACTTAATAAGACAAATGTGCCATCATGGAGTTGGCATCAGGTaGCCAAACACGCACACAGGACAGAGGAGCAGATGCGGTCGTGCC +
Preference number: 5 (lower is better)
Translates to: THLIRQMCHHGVGIR*PNTHTGQRSRCGRA
Trigger: GGCACGACCGCATCTGCTCCTCTGTCCTGTGTGCGTGTTTGGCCACCTGATGCCAACTCCATGATGGCACATTTGTCTTATTAAGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS-3UTR CAA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGATATGTGTGGCTAGATaGGATATGACATCTGACTCG +
Preference number: 5 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRICVAR*DMTSDS
Trigger: CGAGTCAGATGTCATATCCAATCTAGCCACACATAT...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS TCA 90 bp GAGGTGCTTGGCGAAGAAGATGAGGAGGAAGCATCTCAGGGACTCTaGATCTTCTGCTGGGTTTTTGGTACAGGGTCTATCCACATGCCA +
Preference number: 5 (lower is better)
Translates to: EVLGEEDEEEASQGL*IFCWVFGTGSIHMP
Trigger: TGGCATGTGGATAGACCCTGTACCAAAAACCCAGCAGAAGATTCAGAGTCCCTGAGATGCTTCCTCCTCATCTTCTTCGCCAAGCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483375.1
ENST00000488759.5
ENST00000596228.5
ENST00000597823.1
CDS CCA 90 bp ATCAAGCCTCTTTGCGAAATGTCCACAGTCCCTGCCAAGGTGCTCTaGAATTTCTCTGCAGTCCTGGCCTATGTAGGACACTTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: IKPLCEMSTVPAKVL*NFSAVLAYVGHLSS
Trigger: GGAACTCAAGTGTCCTACATAGGCCAGGACTGCAGAGAAATTCCAGAGCACCTTGGCAGGGACTGTGGACATTTCGCAAAGAGGCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTAAGCTGACCAGCTCGTaGGGACAGGCCACGTTGCCC +
Preference number: 5 (lower is better)
Translates to: KELINKGCVISNRDSCQPKLTSS*GQATLP
Trigger: GGGCAACGTGGCCTGTCCCAACGAGCTGGTCAGCTT...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAGCCTCAATACATGTCATTCAAGGCCTGTGTTGACTCAGTGGGCCAGAGGCTTCAAGTTGGGCAGCTaGTACAGAACAAAGCATCTG +
Preference number: 5 (lower is better)
Translates to: ASLNTCHSRPVLTQWARGFKLGS*YRTKHL
Trigger: CAGATGCTTTGTTCTGTACAAGCTGCCCAACTTGAA...GCCTCTGGCCCACTGAGTCAACACAGGCCTTGAATGACATGTATTGAGGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAAAGCTCACATTGAGGGAGACATTCCTGCGCATGATACAAATGGTTCTGACACTTCCCCAGGACACCTaGGTGACTGGTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: PKLTLRETFLRMIQMVLTLPQDT*VTGEFP
Trigger: AGGGAACTCACCAGTCACCAAGGTGTCCTGGGGAAG...TGTCAGAACCATTTGTATCATGCGCAGGAATGTCTCCCTCAATGTGAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CAAGCCAGCCCCACGCACAAGTATGGCCACAGGCATCACTGGAAGTGTGTACGGGGGAGAAAACATGTGTaGATGCTTCTAAACAATGAC +
Preference number: 5 (lower is better)
Translates to: QASPTHKYGHRHHWKCVRGRKHV*MLLNND
Trigger: GTCATTGTTTAGAAGCATCAACACATGTTTTCTCCC...CCGTACACACTTCCAGTGATGCCTGTGGCCATACTTGTGCGTGGGGCTGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGGCCTATGTAGGACACTaGAGTTCCACGCACCACGAG +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWAYVGH*SSTHHE
Trigger: CTCGTGGTGCGTGGAACTCAAGTGTCCTACATAGGC...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS CCA 90 bp CAGGAAGCCAACTCACTTAATAAGACAAATGTGCCATCATGGAGTTaGCATCAGGTGGCCAAACACGCACACAGGACAGAGGAGCAGATG +
Preference number: 5 (lower is better)
Translates to: QEANSLNKTNVPSWS*HQVAKHAHRTEEQM
Trigger: CATCTGCTCCTCTGTCCTGTGTGCGTGTTTGGCCACCTGATGCCAACTCCATGATGGCACATTTGTCTTATTAAGTGAGTTGGCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS CCA 90 bp TCAGACCAGGAAGCCAACTCACTTAATAAGACAAATGTGCCATCATaGAGTTGGCATCAGGTGGCCAAACACGCACACAGGACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: SDQEANSLNKTNVPS*SWHQVAKHAHRTEE
Trigger: CTCCTCTGTCCTGTGTGCGTGTTTGGCCACCTGATGCCAACTCCATGATGGCACATTTGTCTTATTAAGTGAGTTGGCTTCCTGGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS-3UTR CAA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCTTCCCCAGGACACCTaGGTGACTGGTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: LINKGCVISNRDSCQPQYLPQDT*VTGEFP
Trigger: AGGGAACTCACCAGTCACCAAGGTGTCCTGGGGAAG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACAGCTGCAGGACAGCCTaGAATTGCCGAGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHSCRTA*NCRGLS
Trigger: GGAGAGACCTCGGCAATTCAAGGCTGTCCTGCAGCT...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGACAGTCGTCCTGACATaGCTGAGGCAACAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWTVVLT*LRQQRA
Trigger: AGCTCTCTGTTGCCTCAGCAATGTCAGGACGACTGT...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGCCTCCAAAGCTCACATaGAGGGAGACATTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQPPKLT*RETFLR
Trigger: GCGCAGGAATGTCTCCCTCAATGTGAGCTTTGGAGG...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACCAGGACAGCCTTGAATaGCCGAGGTCTCTCCACTCA +
Preference number: 5 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHQDSLE*PRSLHS
Trigger: TGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTG...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTACAGTCGTCCTGACATaGCTGAGGCAACAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISTVVLT*LRQQRA
Trigger: AGCTCTCTGTTGCCTCAGCAATGTCAGGACGACTGT...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS GCA 90 bp GACTCTGAATCTTCTGCTGGGTTTTTGGTACAGGGTCTATCCACATaGCAACATTTCCACGTCTTAGTAAATGCCCCAAGCCTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: DSESSAGFLVQGLST*QHFHVLVNAPSLLS
Trigger: AGAGAGGAGGCTTGGGGCATTTACTAAGACGTGGAAATGTTGGCATGTGGATAGACCCTGTACCAAAAACCCAGCAGAAGATTCAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597823.1
CDS CCA 90 bp ACTGCTCACAAGGTCACAGTGAGGAAAATTCCCAGCCAGGGCTTATaGAGGGTTCAGACCAGGAAGCCAACTCACTTAATAAGACAAATG +
Preference number: 5 (lower is better)
Translates to: TAHKVTVRKIPSQGL*RVQTRKPTHLIRQM
Trigger: CATTTGTCTTATTAAGTGAGTTGGCTTCCTGGTCTGAACCCTCCATAAGCCCTGGCTGGGAATTTTCCTCACTGTGACCTTGTGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS-3UTR CAA 90 bp AAAGAACTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCCTCCAAAGCTCACATaGAGGGAGACATTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: KELINKGCVISNRDSCQPPPKLT*RETFLR
Trigger: GCGCAGGAATGTCTCCCTCAATGTGAGCTTTGGAGG...AGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCAGGACAGCCTTGAATaGCCGAGGTCTCTCCACTCA +
Preference number: 5 (lower is better)
Translates to: ANSDQSLALAQQILVNTQQDSLE*PRSLHS
Trigger: TGAGTGGAGAGACCTCGGCAATTCAAGGCTGTCCTG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS TCA 90 bp GCCATCAGAAATCTTCAACTCTTGGGTGTGCTGTTGAGCATAGGCTaGTTATCAGCCTACTCTGTACTCTCCAAGATGTTAACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: AIRNLQLLGVLLSIG*LSAYSVLSKMLTQS
Trigger: GCTCTGGGTTAACATCTTGGAGAGTACAGAGTAGGCTGATAATCAGCCTATGCTCAACAGCACACCCAAGAGTTGAAGATTTCTGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS-3UTR CAA 90 bp GCCAAGCATACAGGAAGACAGAGCACTGTCTCACAACCTGTGGATTTGATTTCTGAAGGTATACAGAAGTaGGCTTCAGAGCTGGTCATC +
Preference number: 5 (lower is better)
Translates to: AKHTGRQSTVSQPVDLISEGIQK*ASELVI
Trigger: GATGACCAGCTCTGAAGCCAACTTCTGTATACCTTC...AGAAATCAAATCCACAGGTTGTGAGACAGTGCTCTGTCTTCCTGTATGCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp ATGGTATCAGAGGGATTTCAATTCAATAGGCGAGCTGAGGACAGTCTTTCTCACGAAAGTAGGTTCTCCTaGGGCAGCTTAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: MVSEGFQFNRRAEDSLSHESRFS*GSLGIL
Trigger: CAGAATCCCTAAGCTGCCCAAGGAGAACCTACTTTC...GTGAGAAAGACTGTCCTCAGCTCGCCTATTGAATTGAAATCCCTCTGATACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGGAAGGTATACAGAAGTaGGCTTCAGAGCTGGTCATC +
Preference number: 5 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQEGIQK*ASELVI
Trigger: GATGACCAGCTCTGAAGCCAACTTCTGTATACCTTC...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGGACAGTCTTTCTCACTaGACTGCAGCCACTGAGCAT +
Preference number: 5 (lower is better)
Translates to: PTSNDHTYVPCDISASAQDSLSH*TAATEH
Trigger: ATGCTCAGTGGCTGCAGTCAAGTGAGAAAGACTGTC...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCTGGGAAGTTATACCTaGTTCTCCGAAAAACTGCAA +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWLGSYT*FSEKLQ
Trigger: TTGCAGTTTTTCGGAGAACAAGGTATAACTTCCCAG...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGGAAAGTAGGTTCTCCTaGGGCAGCTTAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: ANSDQSLALAQQILVNTQESRFS*GSLGIL
Trigger: CAGAATCCCTAAGCTGCCCAAGGAGAACCTACTTTC...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCTAGCACAGCAAATTTaGGTTAACACACAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWLAQQI*VNTQWN
Trigger: GTTCCACTGTGTGTTAACCAAAATTTGCTGTGCTAG...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGTCAGTGATTCGGTTCTaGTTGAGGGTTAAGGTATGC +
Preference number: 5 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQSVIRF*LRVKVC
Trigger: GCATACCTTAACCCTCAACAAGAACCGAATCACTGA...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGCTCCAAAAATATGTTTaGCCTCCAAAGCTCACATTG +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWLQKYV*PPKLTL
Trigger: CAATGTGAGCTTTGGAGGCAAAACATATTTTTGGAG...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAAACCCTCATGCTGAGAAAGATGCCTTATGCCTTACACTGCATCATATTCAGTCCAGAAATTTCAAGTaGGGCAGCTTGTACAGAACA +
Preference number: 5 (lower is better)
Translates to: PNPHAEKDALCLTLHHIQSRNFK*GSLYRT
Trigger: TGTTCTGTACAAGCTGCCCAACTTGAAATTTCTGGA...CTGAATATGATGCAGTGTAAGGCATAAGGCATCTTTCTCAGCATGAGGGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611255.5
CDS-3UTR CAA 90 bp GCTAGATTGGATATGACATCTGACTCGTCTAGCTGCCCTTGCACAGAATTCTGGGACAGACAGATTAAGTaGGGAATAATAGACAGGTTT +
Preference number: 5 (lower is better)
Translates to: ARLDMTSDSSSCPCTEFWDRQIK*GIIDRF
Trigger: AAACCTGTCTATTATTCCCAACTTAATCTGTCTGTC...CCAGAATTCTGTGCAAGGGCAGCTAGACGAGTCAGATGTCATATCCAATCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CAA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACAAAGTGTGGGCCACATaGCCAGAATCCAAAAGTAAA +
Preference number: 5 (lower is better)
Translates to: LINKGCVISNRDSCQPQYKVWAT*PESKSK
Trigger: TTTACTTTTGGATTCTGGCAATGTGGCCCACACTTT...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS-3UTR CAA 90 bp CTGATTAACAAAGGTTGTGTAATCTCAAACAGGGACTCCTGCCAGCCTCAATACCTAGCACAGCAAATTTaGGTTAACACACAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LINKGCVISNRDSCQPQYLAQQI*VNTQWN
Trigger: GTTCCACTGTGTGTTAACCAAAATTTGCTGTGCTAG...GTATTGAGGCTGGCAGGAGTCCCTGTTTGAGATTACACAACCTTTGTTAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp CCAACTAGCAATGATCACACTTATGTTCCTTGTGACATTAGTGCTAGTGCACAGCTGGGAAGTTATACCTaGTTCTCCGAAAAACTGCAA +
Preference number: 5 (lower is better)
Translates to: PTSNDHTYVPCDISASAQLGSYT*FSEKLQ
Trigger: TTGCAGTTTTTCGGAGAACAAGGTATAACTTCCCAG...CTGTGCACTAGCACTAATGTCACAAGGAACATAAGTGTGATCATTGCTAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCTCAGTATCTATAACTaGGAGGGATTCTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: ANSDQSLALAQQILVNTQLSIYN*EGFSFR
Trigger: CCTGAAAGAGAATCCCTCCAAGTTATAGATACTGAG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTCTCAGTATCTATAACTaGGAGGGATTCTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: MPYALHCIIFRARSGFRVLSIYN*EGFSFR
Trigger: CCTGAAAGAGAATCCCTCCAAGTTATAGATACTGAG...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp ATGCCTTATGCCTTACACTGCATCATATTCAGGGCAAGAAGTGGATTTAGAGTTATATGTGTGGCTAGATaGGATATGACATCTGACTCG +
Preference number: 5 (lower is better)
Translates to: MPYALHCIIFRARSGFRVICVAR*DMTSDS
Trigger: CGAGTCAGATGTCATATCCAATCTAGCCACACATAT...AACTCTAAATCCACTTCTTGCCCTGAATATGATGCAGTGTAAGGCATAAGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS-3UTR CAA 90 bp GCCAATTCAGACCAAAGTCTAGCTCTAGCACAGCAAATTTTGGTTAACACACAGCTCCAAAAATATGTTTaGCCTCCAAAGCTCACATTG +
Preference number: 5 (lower is better)
Translates to: ANSDQSLALAQQILVNTQLQKYV*PPKLTL
Trigger: CAATGTGAGCTTTGGAGGCAAAACATATTTTTGGAG...CTGTGTGTTAACCAAAATTTGCTGTGCTAGAGCTAGACTTTGGTCTGAATTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496424.2
ENST00000611255.5
CDS TCA 90 bp TTTACCAGCATATTTGATTCATGTGAATGTCCCATTCCTCAACAGTaGCAGAGTACAGCAAGTTTACTGTGGATTCTCAACACTGGAATA +
Preference number: 5 (lower is better)
Translates to: FTSIFDSCECPIPQQ*QSTASLLWILNTGI
Trigger: TATTCCAGTGTTGAGAATCCACAGTAAACTTGCTGTACTCTGTCACTGTTGAGGAATGGGACATTCACATGAATCAAATATGCTGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488655.5
CDS TCA 72 bp CCAGCTCGTTGGGACAGGCCACGTTGCCCAGCAGACTaGGGTACTCCAGAGCTGGTGTCACTTCTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: PARWDRPRCPAD*GTPELVSLLPS
Trigger: ACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAACGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS CAA 90 bp TCCTCATCCTTTTCCAAGCTGACCAGCTCGTTGGGACAGGCCACGTaGCCCAGCAGACTGAGGTACTCCAGAGCTGGTGTCACTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SSSFSKLTSSLGQAT*PSRLRYSRAGVTSA
Trigger: GGCAGAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAACGAGCTGGTCAGCTTGGAAAAGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS TCA 72 bp GCTACACTGAGCAGATGCCACTGTTGGCAAGAGGCATaGGAGCAACAGCAGGTACTCCACGGCTTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: ATLSRCHCWQEA*EQQQVLHGFGG
Trigger: GCCCCCAAAGCCGTGGAGTACCTGCTGTTGCTCTCATGCCTCTTGCCAACAGTGGCATCTGCTCAGTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372499.5
CDS CCA 72 bp GGCCACGTTGCCCAGCAGACTGAGGTACTCCAGAGCTaGTGTCACTTCTGCCAAGTGATCCAGCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: GHVAQQTEVLQS*CHFCQVIQQVL
Trigger: GAGAACCTGCTGGATCACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS CAA 72 bp TTTTCCAAGCTGACCAGCTCGTTGGGACAGGCCACGTaGCCCAGCAGACTGAGGTACTCCAGAGCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: FSKLTSSLGQAT*PSRLRYSRAGV
Trigger: GACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAACGAGCTGGTCAGCTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS TCA 72 bp CTGGGTAACCCTGGCAACACAAGGTCGTCCCCCAGCTaGTTGTTGTCCAAGATGAGTTCCTCCAGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: LGNPGNTRSSPS*LLSKMSSSRLL
Trigger: CAGGAGCCTGGAGGAACTCATCTTGGACAACAATCAGCTGGGGGACGACCTTGTGTTGCCAGGGTTACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000593817.1
ENST00000611255.5
ENST00000611306.1
CDS TCA 72 bp AAGGCAATGGCCCAGAGCTTCCCATTTGTTTCTATCTaGTCTACAGGGGGCCCAGTTCTGCCAGTGCCCACA +
Preference number: 6 (lower is better)
Translates to: KAMAQSFPFVSI*STGGPVLPVPT
Trigger: TGTGGGCACTGGCAGAACTGGGCCCCCTGTAGATCAGATAGAAACAAATGGGAAGCTCTGGGCCATTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS TCA 72 bp CATGCACGCCGGCGCTGGCTAAAGGTTCTCAACAAGTaGAAGTTGCGGGTCTTTCAGCCAGATCCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: HARRRWLKVLNK*KLRVFQPDPLS
Trigger: AGAAAGAGGATCTGGCTGAAAGACCCGCAACTTTCACTTGTTGAGAACCTTTAGCCAGCGCCGGCGTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372499.5
CDS TCA 72 bp CTGAGGTACTCCAGAGCTGGTGTCACTTCTGCCAAGTaGTCCAGCAGGTTCTCCAAATCAGTGATTCGGTTC +
Preference number: 6 (lower is better)
Translates to: LRYSRAGVTSAK*SSRFSKSVIRF
Trigger: GAACCGAATCACTGATTTGGAGAACCTGCTGGATCACTTGGCAGAAGTGACACCAGCTCTGGAGTACCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS TCA 72 bp TGGGCAAATGCTGAGCATGAAGCTGAGCGAGGGAGCTaGAGGGTAATTCAAGTAAGAAGCTGGTCACAGCAG +
Preference number: 6 (lower is better)
Translates to: WANAEHEAERGS*RVIQVRSWSQQ
Trigger: CTGCTGTGACCAGCTTCTTACTTGAATTACCCTTCAGCTCCCTCGCTCAGCTTCATGCTCAGCATTTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS CCA 72 bp CAAGAAAAAGATCCCAATGGAGAAGAGGTCAGAGTCTaGGCAAATGCTGAGCATGAAGCTGAGCGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: QEKDPNGEEVRV*ANAEHEAERGS
Trigger: GCTCCCTCGCTCAGCTTCATGCTCAGCATTTGCCCAGACTCTGACCTCTTCTCCATTGGGATCTTTTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS CCA 72 bp ATAAGACAAATGTGCCATCATGGAGTTGGCATCAGGTaGCCAAACACGCACACAGGACAGAGGAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: IRQMCHHGVGIR*PNTHTGQRSRC
Trigger: GCATCTGCTCCTCTGTCCTGTGTGCGTGTTTGGCCACCTGATGCCAACTCCATGATGGCACATTTGTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS CAA 72 bp CAAATTCTTGATGGCTACACTGAGCAGATGCCACTGTaGGCAAGAGGCATGAGAGCAACAGCAGGTACTCCA +
Preference number: 6 (lower is better)
Translates to: QILDGYTEQMPL*ARGMRATAGTP
Trigger: TGGAGTACCTGCTGTTGCTCTCATGCCTCTTGCCAACAGTGGCATCTGCTCAGTGTAGCCATCAAGAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372499.5
CDS CAA 90 bp ATTGACATTCAAATTCTTGATGGCTACACTGAGCAGATGCCACTGTaGGCAAGAGGCATGAGAGCAACAGCAGGTACTCCACGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: IDIQILDGYTEQMPL*ARGMRATAGTPRLW
Trigger: CCAAAGCCGTGGAGTACCTGCTGTTGCTCTCATGCCTCTTGCCAACAGTGGCATCTGCTCAGTGTAGCCATCAAGAATTTGAATGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372499.5
CDS CAA 90 bp ATGAGGAGGAAGCATCTCAGGGACTCTGAATCTTCTGCTGGGTTTTaGGTACAGGGTCTATCCACATGCCAACATTTCCACGTCTGCACT +
Preference number: 6 (lower is better)
Translates to: MRRKHLRDSESSAGF*VQGLSTCQHFHVCT
Trigger: AGTGCAGACGTGGAAATGTTGGCATGTGGATAGACCCTGTACCAAAAACCCAGCAGAAGATTCAGAGTCCCTGAGATGCTTCCTCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596228.5
CDS GCA 72 bp AAATCAGTGATTCGGTTCTTGTTGAGGGTTAAGGTATaGAGTCTGGGTAACCCTGGCAACACAAGGTCGTCC +
Preference number: 6 (lower is better)
Translates to: KSVIRFLLRVKV*SLGNPGNTRSS
Trigger: GGACGACCTTGTGTTGCCAGGGTTACCCAGACTGCATACCTTAACCCTCAACAAGAACCGAATCACTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372499.5
ENST00000593699.5
ENST00000611255.5
ENST00000611306.1
CDS CCA 72 bp CCTGCCTTCTCTCTTTGTCACATCAGCACACATCAGTaGGATGTACATGACCCATTCTGCTCATTCACCTCT +
Preference number: 6 (lower is better)
Translates to: PAFSLCHISTHQ*DVHDPFCSFTS
Trigger: AGAGGTGAATGAGCAGAATGGGTCATGTACATCCCACTGATGTGTGCTGATGTGACAAAGAGAGAAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS CCA 72 bp AAGGTCACAGTGAGGAAAATTCCCAGCCAGGGCTTATaGAGGGTTCAGACCAGGAAGCCAACTCACTTAATA +
Preference number: 6 (lower is better)
Translates to: KVTVRKIPSQGL*RVQTRKPTHLI
Trigger: TATTAAGTGAGTTGGCTTCCTGGTCTGAACCCTCCATAAGCCCTGGCTGGGAATTTTCCTCACTGTGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS CCA 72 bp CTCCTCTCTTCCACAGTCTCTAGGCTACTGCAGCACTaGCTTTTGTGTCTAGCTCTTGGCTATTTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: LLSSTVSRLLQH*LLCLALGYFKL
Trigger: AAGCTTGAAATAGCCAAGAGCTAGACACAAAAGCCAGTGCTGCAGTAGCCTAGAGACTGTGGAAGAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596228.5
ENST00000597823.1
CDS CAA 90 bp GACACTTCCCCAGGACACCTGAGTCCTTTCCAGGTCACTGACATCTaGGCTGATTCAGAAATGTGTAGAAAAGAGCAAGGTATTTCAGCT +
Preference number: 6 (lower is better)
Translates to: DTSPGHLSPFQVTDI*ADSEMCRKEQGISA
Trigger: AGCTGAAATACCTTGCTCTTTTCTACACATTTCTGAATCAGCCAAGATGTCAGTGACCTGGAAAGGACTCAGGTGTCCTGGGGAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468134.1
CDS CAA 90 bp ATGAGGAGGAAGCATCTCAGGGACTCTGAATCTTCTGCTGGGTTTTaGGTACAGGGTCTATCCACATGCCAACATTTCCACGTCTTAGTA +
Preference number: 6 (lower is better)
Translates to: MRRKHLRDSESSAGF*VQGLSTCQHFHVLV
Trigger: TACTAAGACGTGGAAATGTTGGCATGTGGATAGACCCTGTACCAAAAACCCAGCAGAAGATTCAGAGTCCCTGAGATGCTTCCTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597823.1
CDS GCA 72 bp TCTTCTGCTGGGTTTTTGGTACAGGGTCTATCCACATaGCAACATTTCCACGTCTTAGTAAATGCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: SSAGFLVQGLST*QHFHVLVNAPS
Trigger: GCTTGGGGCATTTACTAAGACGTGGAAATGTTGGCATGTGGATAGACCCTGTACCAAAAACCCAGCAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597823.1
CDS CCA 72 bp AACTCACTTAATAAGACAAATGTGCCATCATGGAGTTaGCATCAGGTGGCCAAACACGCACACAGGACAGAG +
Preference number: 6 (lower is better)
Translates to: NSLNKTNVPSWS*HQVAKHAHRTE
Trigger: CTCTGTCCTGTGTGCGTGTTTGGCCACCTGATGCCAACTCCATGATGGCACATTTGTCTTATTAAGTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS CAA 72 bp CCAGGACACCTGAGTCCTTTCCAGGTCACTGACATCTaGGCTGATTCAGAAATGTGTAGAAAAGAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: PGHLSPFQVTDI*ADSEMCRKEQG
Trigger: ACCTTGCTCTTTTCTACACATTTCTGAATCAGCCAAGATGTCAGTGACCTGGAAAGGACTCAGGTGTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468134.1
CDS CAA 72 bp GGACACCTTAGATCAAAGAGCATATCATGTGCCCTATaGTCTTCCCGTGTCACATGTCCTCCACGAGATGAT +
Preference number: 6 (lower is better)
Translates to: GHLRSKSISCAL*SSRVTCPPRDD
Trigger: ATCATCTCGTGGAGGACATGTGACACGGGAAGACAATAGGGCACATGATATGCTCTTTGATCTAAGGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493194.2
CDS CAA 90 bp ACTTCCCCAGGACACCTTAGATCAAAGAGCATATCATGTGCCCTATaGTCTTCCCGTGTCACATGTCCTCCACGAGATGATCATATAATC +
Preference number: 6 (lower is better)
Translates to: TSPGHLRSKSISCAL*SSRVTCPPRDDHII
Trigger: GATTATATGATCATCTCGTGGAGGACATGTGACACGGGAAGACAATAGGGCACATGATATGCTCTTTGATCTAAGGTGTCCTGGGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493194.2
CDS TCA 72 bp AATCTTCAACTCTTGGGTGTGCTGTTGAGCATAGGCTaGTTATCAGCCTACTCTGTACTCTCCAAGATGTTA +
Preference number: 6 (lower is better)
Translates to: NLQLLGVLLSIG*LSAYSVLSKML
Trigger: TAACATCTTGGAGAGTACAGAGTAGGCTGATAATCAGCCTATGCTCAACAGCACACCCAAGAGTTGAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593699.5
CDS GCA 72 bp CATGACTGTAATTCAACACGAAAGTGTGGGCCACATTaGCAGAATCCAAAAGTAAAGACTTGCCATCTTCTG +
Preference number: 6 (lower is better)
Translates to: HDCNSTRKCGPH*QNPKVKTCHLL
Trigger: CAGAAGATGGCAAGTCTTTACTTTTGGATTCTGGCAATGTGGCCCACACTTTCGTGTTGAATTACAGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496424.2
CDS CAA 90 bp CCGCTGAGTGACAAATACTTTTCCATTCATTTCAAGGCAAAGATATaGACATTCAAATTCTTGATGGCTACACTGAGCAGATGCCACTGT +
Preference number: 6 (lower is better)
Translates to: PLSDKYFSIHFKAKI*TFKFLMATLSRCHC
Trigger: ACAGTGGCATCTGCTCAGTGTAGCCATCAAGAATTTGAATGTCAATATCTTTGCCTTGAAATGAATGGAAAAGTATTTGTCACTCAGCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372499.5
CDS TCA 72 bp ATATTTGATTCATGTGAATGTCCCATTCCTCAACAGTaGCAGAGTACAGCAAGTTTACTGTGGATTCTCAAC +
Preference number: 6 (lower is better)
Translates to: IFDSCECPIPQQ*QSTASLLWILN
Trigger: GTTGAGAATCCACAGTAAACTTGCTGTACTCTGTCACTGTTGAGGAATGGGACATTCACATGAATCAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488655.5