Pregenerated sensors for LRIG2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000238198, ENSG00000281557Ensembl transcript IDs: ENST00000421157.2, ENST00000626817.3
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCAGGAGGTCCAGTATCTCCCTGGAGACCTTCCTACCAACCCTCTaGATTGTTCAAGAACAAGGGCTTCTGCCTGTCTTGTCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GRRSSISLETFLPTL*IVQEQGLLPVLSGP Trigger: AGGACCTGACAAGACAGGCAGAAGCCCTTGTTCTTGAACAATTCAGAGGGTTGGTAGGAAGGTCTCCAGGGAGATACTGGACCTCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626817.3 |
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| CDS CCA 90 bp | CACCCCCTCCCTTTGATTTCTTTCTCCAGATTGAGTGGGTTTAATTaGAATTGCACGTCCTCAGCGTTTCATGAAGGACAGATTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: HPLPLISFSRLSGFN*NCTSSAFHEGQIFY Trigger: ATAGAAAATCTGTCCTTCATGAAACGCTGAGGACGTGCAATTCCAATTAAACCCACTCAATCTGGAGAAAGAAATCAAAGGGAGGGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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| CDS GCA 90 bp | CTCCCTTTGATTTCTTTCTCCAGATTGAGTGGGTTTAATTGGAATTaGACGTCCTCAGCGTTTCATGAAGGACAGATTTTCTATCTGACC | + |
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Preference number: 5 (lower is better) Translates to: LPLISFSRLSGFNWN*TSSAFHEGQIFYLT Trigger: GGTCAGATAGAAAATCTGTCCTTCATGAAACGCTGAGGACGTGCAATTCCAATTAAACCCACTCAATCTGGAGAAAGAAATCAAAGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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| CDS CCA 90 bp | AAGAACAATAAGATAATAACTGGTCAAACATCAAAAGCACTTGGGTaGGTCTTCCACAAACATTTAGTCTTCTCTCCCACCAACACCATG | + |
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Preference number: 5 (lower is better) Translates to: KNNKIITGQTSKALG*VFHKHLVFSPTNTM Trigger: CATGGTGTTGGTGGGAGAGAAGACTAAATGTTTGTGGAAGACCCACCCAAGTGCTTTTGATGTTTGACCAGTTATTATCTTATTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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| CDS TCA 90 bp | CTTTCATCTTCACGTTGGGTGATTGCAGTCATAAATTTCACACAATaGTCCTGCTTGTATCATAGAATAACCCATTTTCTGATGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: LSSSRWVIAVINFTQ*SCLYHRITHFLMNR Trigger: CCTGTTCATCAGAAAATGGGTTATTCTATGATACAAGCAGGATCATTGTGTGAAATTTATGACTGCAATCACCCAACGTGAAGATGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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| CDS GCA 72 bp | AGCTATTCGCCGCACCATTCCCTCTTAAGGAACTACTaGGCCCTCCAGCGGAAGAACAGCGGCGGAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: SYSPHHSLLRNY*ALQRKNSGGTP Trigger: TGGAGTTCCGCCGCTGTTCTTCCGCTGGAGGGCGCAGTAGTTCCTTAAGAGGGAATGGTGCGGCGAATAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421157.2 |
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| CDS CCA 72 bp | TGCGGCGAGCCAAGATTATACCACGGCACTACAGCCTaGGTGATAGGGCAAGATTCTGTCTGGGCTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CGEPRLYHGTTA*VIGQDSVWAWW Trigger: CCACCAAGCCCAGACAGAATCTTGCCCTATCACCCAGGCTGTAGTGCCGTGGTATAATCTTGGCTCGCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421157.2 |
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| CDS CCA 72 bp | TGCGGCGAGCCAAGATTATACCACGGCACTACAGCCTaGGTGATAGGGCAAGATTCTGTAGCCCAACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CGEPRLYHGTTA*VIGQDSVAQLQ Trigger: CTGCAGTTGGGCTACAGAATCTTGCCCTATCACCCAGGCTGTAGTGCCGTGGTATAATCTTGGCTCGCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626817.3 |
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| CDS CAA 90 bp | GGAGGTCCAGTATCTCCCTGGAGACCTTCCTACCAACCCTCTGAATaGTTCAAGAACAAGGGCTTCTGCCTGTCTTGTCAGGTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGPVSPWRPSYQPSE*FKNKGFCLSCQVLG Trigger: CCCAAGGACCTGACAAGACAGGCAGAAGCCCTTGTTCTTGAACAATTCAGAGGGTTGGTAGGAAGGTCTCCAGGGAGATACTGGACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626817.3 |
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| CDS CAA 90 bp | CTGAATTGTTCAAGAACAAGGGCTTCTGCCTGTCTTGTCAGGTCCTaGGGAGAGAGTGGAGGAGATGGTGTTCTCGTCTGTGAGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: LNCSRTRASACLVRS*GESGGDGVLVCEKH Trigger: GTGTTTCTCACAGACGAGAACACCATCTCCTCCACTCTCTCCCAAGGACCTGACAAGACAGGCAGAAGCCCTTGTTCTTGAACAATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626817.3 |
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| CDS TCA 72 bp | TCCAGTATCTCCCTGGAGACCTTCCTACCAACCCTCTaGATTGTTCAAGAACAAGGGCTTCTGCCTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSISLETFLPTL*IVQEQGLLPVL Trigger: CAAGACAGGCAGAAGCCCTTGTTCTTGAACAATTCAGAGGGTTGGTAGGAAGGTCTCCAGGGAGATACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626817.3 |
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| CDS CAA 72 bp | GTATCTCCCTGGAGACCTTCCTACCAACCCTCTGAATaGTTCAAGAACAAGGGCTTCTGCCTGTCTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VSPWRPSYQPSE*FKNKGFCLSCQ Trigger: CTGACAAGACAGGCAGAAGCCCTTGTTCTTGAACAATTCAGAGGGTTGGTAGGAAGGTCTCCAGGGAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626817.3 |
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| CDS CAA 90 bp | CCACAGTTTGAACCAGCACCAACTTGTCTTTGCTCTGTTATTGGTTaGCTGTCTTTGCCTGTTATTCCATATCACTTGCTGGAAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PQFEPAPTCLCSVIG*LSLPVIPYHLLEGS Trigger: GCTTCCTTCCAGCAAGTGATATGGAATAACAGGCAAAGACAGCAAACCAATAACAGAGCAAAGACAAGTTGGTGCTGGTTCAAACTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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| CDS CCA 72 bp | CCTTTGATTTCTTTCTCCAGATTGAGTGGGTTTAATTaGAATTGCACGTCCTCAGCGTTTCATGAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: PLISFSRLSGFN*NCTSSAFHEGQ Trigger: CTGTCCTTCATGAAACGCTGAGGACGTGCAATTCCAATTAAACCCACTCAATCTGGAGAAAGAAATCAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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| CDS GCA 72 bp | ATTTCTTTCTCCAGATTGAGTGGGTTTAATTGGAATTaGACGTCCTCAGCGTTTCATGAAGGACAGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISFSRLSGFNWN*TSSAFHEGQIF Trigger: GAAAATCTGTCCTTCATGAAACGCTGAGGACGTGCAATTCCAATTAAACCCACTCAATCTGGAGAAAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421157.2 ENST00000626817.3 |
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