RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRIG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198799

Ensembl transcript IDs: ENST00000361127.6, ENST00000466069.5, ENST00000466161.1, ENST00000492207.5

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTaGCCCGTATCTTCCCTCTGCCGGTGCTGCACATTTTTGATGAGC +
Preference number: 1 (lower is better)
Translates to: MHTRAHPHGSIRKHI*PVSSLCRCCTFLMS
Trigger: GCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp TTTCTAGAGCACTGGCTCACAGGCTATCTTCTGCTCTCTCACACATaGCGGGTGATGCTCATTGGCACAGTCTCTGGCAGCCTAGCCCTA +
Preference number: 1 (lower is better)
Translates to: FLEHWLTGYLLLSHT*RVMLIGTVSGSLAL
Trigger: TAGGGCTAGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGTCATGTGTGAGAGAGCAGAAGATAGCCTGTGAGCCAGTGCTCTAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp AAGACTAGGGCAATCCAGCATGTTAAGCAGCAATGTGACTCTTCCTaGCAAGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAG +
Preference number: 1 (lower is better)
Translates to: KTRAIQHVKQQCDSS*QADAHQGTSPWKHQ
Trigger: CTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCTTGTCAGGAAGAGTCACATTGCTGCTTAACATGCTGGATTGCCCTAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 90 bp CACAGGCTATCTTCTGCTCTCTCACACATGACGGGTGATGCTCATTaGCACAGTCTCTGGCAGCCTAGCCCTAATTCCACCTATTCCATT +
Preference number: 1 (lower is better)
Translates to: HRLSSALSHMTGDAH*HSLWQPSPNSTYSI
Trigger: AATGGAATAGGTGGAATTAGGGCTAGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGTCATGTGTGAGAGAGCAGAAGATAGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 90 bp TCTGCTCTCTCACACATGACGGGTGATGCTCATTGGCACAGTCTCTaGCAGCCTAGCCCTAATTCCACCTATTCCATTCAGGAAATCTAT +
Preference number: 1 (lower is better)
Translates to: SALSHMTGDAHWHSL*QPSPNSTYSIQEIY
Trigger: ATAGATTTCCTGAATGGAATAGGTGGAATTAGGGCTAGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGTCATGTGTGAGAGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 90 bp TTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACTATCTaGCTGAAACCACTGAAGAATCCCAGGCACACTTCCCAGAAGGCT +
Preference number: 1 (lower is better)
Translates to: FLPKTLNIKAPVSTI*LKPLKNPRHTSQKA
Trigger: AGCCTTCTGGGAAGTGTGCCTGGGATTCTTCAGTGGTTTCAGGCAGATAGTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 90 bp CTAAGGACATCTCAACCATCTGAGTTGACACAATGGAAAATGACCTaGCTCTTTAGGAGACCAGACTCTGACAGCACTGTCAGTAGAAGG +
Preference number: 1 (lower is better)
Translates to: LRTSQPSELTQWKMT*LFRRPDSDSTVSRR
Trigger: CCTTCTACTGACAGTGCTGTCAGAGTCTGGTCTCCTAAAGAGCCAGGTCATTTTCCATTGTGTCAACTCAGATGGTTGAGATGTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp AGTTTTCCTCTAGGTGCATACAGCTGTGACAGGACTGCCAGGCTCTaGAAGAACAAGCTTTTTATGTTAGAAAGGGAGTATCACCTAGCA +
Preference number: 1 (lower is better)
Translates to: SFPLGAYSCDRTARL*KNKLFMLEREYHLA
Trigger: TGCTAGGTGATACTCCCTTTCTAACATAAAAAGCTTGTTCTTTCAGAGCCTGGCAGTCCTGTCACAGCTGTATGCACCTAGAGGAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp ATTAGGGGGCAGTGGGGAAAGGAGCATTTCAGTTTGCAACATTCCTaGTTAGCATTAGGCAGACATGATTCTGCTGGAAGAAATACTCAT +
Preference number: 1 (lower is better)
Translates to: IRGQWGKEHFSLQHS*LALGRHDSAGRNTH
Trigger: ATGAGTATTTCTTCCAGCAGAATCATGTCTGCCTAATGCTAATCAGGAATGTTGCAAACTGAAATGCTCCTTTCCCCACTGCCCCCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp AGCAAAGTAGAACATCGAAGTAGTGATGTTTTCTCAGGACCATTCTaGAGACTAGGGCAATCCAGCATGTTAAGCAGCAATGTGACTCTT +
Preference number: 1 (lower is better)
Translates to: SKVEHRSSDVFSGPF*RLGQSSMLSSNVTL
Trigger: AAGAGTCACATTGCTGCTTAACATGCTGGATTGCCCTAGTCTTCAGAATGGTCCTGAGAAAACATCACTACTTCGATGTTCTACTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 90 bp CAGAGGTGGATGACGTCTAGCACTAGTAATGGGTCTGTAATAAAGTaGCTTACCTCTTTTGGGCAAACTGAAAATATGACAGGAAGTAAG +
Preference number: 1 (lower is better)
Translates to: QRWMTSSTSNGSVIK*LTSFGQTENMTGSK
Trigger: CTTACTTCCTGTCATATTTTCAGTTTGCCCAAAAGAGGTAAGCCACTTTATTACAGACCCATTACTAGTGCTAGACGTCATCCACCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 90 bp CATTCTGATATTCTAGTGTGCTATAAAACCAGCATTCAGACATTCTaGTCTAGAGAGCAATGGGTGGTTTTTCAACTGAGTCAAGATTCT +
Preference number: 1 (lower is better)
Translates to: HSDILVCYKTSIQTF*SREQWVVFQLSQDS
Trigger: AGAATCTTGACTCAGTTGAAAAACCACCCATTGCTCTCTAGAGCAGAATGTCTGAATGCTGGTTTTATAGCACACTAGAATATCAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 90 bp AAATTAGTTGTGGTATACCTGTCAACTCATTCTGATATTCTAGTGTaGTATAAAACCAGCATTCAGACATTCTGCTCTAGAGAGCAATGG +
Preference number: 1 (lower is better)
Translates to: KLVVVYLSTHSDILV*YKTSIQTFCSREQW
Trigger: CCATTGCTCTCTAGAGCAGAATGTCTGAATGCTGGTTTTATAGCACACTAGAATATCAGAATGAGTTGACAGGTATACCACAACTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 90 bp GTGTGCTATAAAACCAGCATTCAGACATTCTGCTCTAGAGAGCAATaGGTGGTTTTTCAACTGAGTCAAGATTCTTTGTTTACTAATACT +
Preference number: 1 (lower is better)
Translates to: VCYKTSIQTFCSREQ*VVFQLSQDSLFTNT
Trigger: AGTATTAGTAAACAAAGAATCTTGACTCAGTTGAAAAACCACCCATTGCTCTCTAGAGCAGAATGTCTGAATGCTGGTTTTATAGCACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp ACAAAACAAACTTGGAAAAGAAGCAATCTTTGGTTTCCTGGTCAATaGAGAACTTTGCTGAAAGAAGATATTCCCATTCAGAGAAAGCAC +
Preference number: 1 (lower is better)
Translates to: TKQTWKRSNLWFPGQ*RTLLKEDIPIQRKH
Trigger: GTGCTTTCTCTGAATGGGAATATCTTCTTTCAGCAAAGTTCTTCATTGACCAGGAAACCAAAGATTGCTTCTTTTCCAAGTTTGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp GAAATTGTGATCTTTAGGAAGTTCAAAGTGAAAATGATCAGAGGCTaGCATAGTAAAGACATAAAAAGGTGTGGCAGTACTAAACAGCTC +
Preference number: 1 (lower is better)
Translates to: EIVIFRKFKVKMIRG*HSKDIKRCGSTKQL
Trigger: GAGCTGTTTAGTACTGCCACACCTTTTTATGTCTTTACTATGTCAGCCTCTGATCATTTTCACTTTGAACTTCCTAAAGATCACAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 90 bp GCATTCAGACATTCTGCTCTAGAGAGCAATGGGTGGTTTTTCAACTaGGTCAAGATTCTTTGTTTACTAATACTGTTTAGAAGCAGAATT +
Preference number: 1 (lower is better)
Translates to: AFRHSALESNGWFFN*VKILCLLILFRSRI
Trigger: AATTCTGCTTCTAAACAGTATTAGTAAACAAAGAATCTTGACTCAGTTGAAAAACCACCCATTGCTCTCTAGAGCAGAATGTCTGAATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 90 bp GGTGTGGTGGCACAGCTACTCAGGTGGTTGAGGTGGGAGGATCACTaGGGCTTGAGATATCAAGGCTGCAGTGACGACAGTGAGCCACGT +
Preference number: 2 (lower is better)
Translates to: GVVAQLLRWLRWEDH*GLRYQGCSDDSEPR
Trigger: ACGTGGCTCACTGTCGTCACTGCAGCCTTGATATCTCAAGCCCAAGTGATCCTCCCACCTCAACCACCTGAGTAGCTGTGCCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGACCAAACAACGCATaGCCCACCTTGGTGCGGTCA +
Preference number: 2 (lower is better)
Translates to: SRCTPGHIPMEASGSTFARPNNA*PTLVRS
Trigger: TGACCGCACCAAGGTGGGCCATGCGTTGTTTGGTCT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCAGGCTGGGATGCAGTaGCTTCACACAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGQAGMQ*LHTAHC
Trigger: GCAGTGAGCTGTGTGAAGCCACTGCATCCCAGCCTG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGCGCTCCAGCCTGGGTaGCCGAGAGGGACTCCATCT +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHALQPG*PRGTPS
Trigger: AGATGGAGTCCCTCTCGGTCACCCAGGCTGGAGCGC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTACGGGTGATGCTCATTaGCACAGTCTCTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGTGDAH*HSLWQP
Trigger: AGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTGACCGGCCTCCTACATaGTGTTTTCTAGAGCACTGG +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGDRPPT*CFLEHW
Trigger: CCAGTGCTCTAGAAAACATCATGTAGGAGGCCGGTC...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTATCAGGAAGCACATTTaGCCCGTATCTTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGIRKHI*PVSSLC
Trigger: GCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGAT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTAGGGTCTCACCATGTTaGCCAGCCTGGTCTCAAATT +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGRVSPC*PAWSQI
Trigger: AATTTGAGACCAGGCTGGGCAACATGGTGAGACCCT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACACGCATGGCCCACCTTaGTGCGGTCAGATGCAATCA +
Preference number: 2 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNTHGPP*CGQMQS
Trigger: TGATTGCATCTGACCGCACCAAGGTGGGCCATGCGT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTAGTGCAGAAGTCGGATaGACAAATGGTTCCAGAAGC +
Preference number: 2 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVSAEVG*TNGSRS
Trigger: GCTTCTGGAACCATTTGTCCATCCGACTTCTGCACT...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTAGGACTACAGCAGCATaGCACAATGTCCACCTATTT +
Preference number: 2 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVRTTAA*HNVHLF
Trigger: AAATAGGTGGACATTGTGGCATGCTGCTGTAGTCCT...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACAGGGCACATCCCCATaGAAGCATCAGGAAGCACAT +
Preference number: 2 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPQGTSP*KHQEAH
Trigger: ATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACATTAGCCGGGTGTGGTaGCACAGCTACTCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHISRVW*HSYSGG
Trigger: ACCACCTGAGTAGCTGTGCCACCACACCCGGCTAAT...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCACATATATTTACAATaGCATCCCTGGGCAATAGGG +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGHIYLQ*HPWAIG
Trigger: CCCTATTGCCCAGGGATGTCATTGTAAATATATGTG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCTGGGATTACAGGTGTaGGCCACAGTTTTTATACTT +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGLGLQV*ATVFIL
Trigger: AAGTATAAAAACTGTGGCTCACACCTGTAATCCCAG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCTGAGGCAAGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHLRQEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCTTGCCTCAG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 90 bp AAGCACATTTGCCCCGTATCTTCCCTCTGCCGGTGCTGCACATTTTaGATGAGCTGTACCCATTTCTGTCAGCTGTTGCCATTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: KHICPVSSLCRCCTF*MSCTHFCQLLPFLH
Trigger: ATGAAGAAATGGCAACAGCTGACAGAAATGGGTACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGACTGAGCAAGCAGGTGTaGGCACCTATTTCACTACCA +
Preference number: 2 (lower is better)
Translates to: KRSPDTIRNGESGALRLRLSKQV*APISLP
Trigger: TGGTAGTGAAATAGGTGCTCACACCTGCTTGCTCAG...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCCCACAAGAATCAGGTaGAAACAGAGGTGGATGACG +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHPTRIR*KQRWMT
Trigger: CGTCATCCACCTCTGTTTTCACCTGATTCTTGTGGG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGCTGGGAGGCGGAGATTaGAGTGAGCTGAGACCGTGC +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKLGGGD*SELRPC
Trigger: GCACGGTCTCAGCTCACTGCAATCTCCGCCTCCCAG...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGACCAGTTGGTCAAGCCTaGGATTCTTGCCAAAGACCT +
Preference number: 2 (lower is better)
Translates to: KRSPDTIRNGESGALRLRPVGQA*DSCQRP
Trigger: AGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGG...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCCATGTTGGCCAGGATaGTCTCGATCTCTTGATCCA +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHPCWPG*SRSLDP
Trigger: TGGATCAAGAGATCGAGACCATCCTGGCCAACATGG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGGCAGGAGAATCGCTTaGACCTGGGAGGCGGAGATT +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKGRRIA*TWEAEI
Trigger: AATCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCAATCACTAAGTAGCTaGCTCTATAGATACACTTCT +
Preference number: 2 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVQSLSS*LYRYTS
Trigger: AGAAGTGTATCTATAGAGGCAGCTACTTAGTGATTG...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGCTCTGTCACCCAGGCTaGGATGCAGTGGCTTCACAC +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKLCHPG*DAVASH
Trigger: GTGTGAAGCCACTGCATCCCAGCCTGGGTGACAGAG...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAACCCCAGTCAGAACATaGCAAGAGCAAAGTCACAGA +
Preference number: 2 (lower is better)
Translates to: KRSPDTIRNGESGALRLRTPVRT*QEQSHR
Trigger: TCTGTGACTTTGCTCTTGCCATGTTCTGACTGGGGT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCCCATAGTTGCAAAGTaGCATGTTTTTGTAGCTTTT +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGPIVAK*HVFVAF
Trigger: AAAAGCTACAAAAACATGCCACTTTGCAACTATGGG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCGGCAAGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: GTLILLRGLTYCLIRNICGKQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCTTGCC...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCTCCAAAGTTATTTTTaGTCCTTGGAAAGCAAAGTA +
Preference number: 2 (lower is better)
Translates to: TVSRRTTARAERQYSYTGLQSYF*SLESKV
Trigger: TACTTTGCTTTCCAAGGAGCAAAAATAACTTTGGAG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCTTAGCCTCTCAAAATaGTGGGATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHLSLSK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCATTTTGAGAGGCTAAG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCCCCGTATCTTCCCTCTaGCGGTGCTGCACATTTTTG +
Preference number: 2 (lower is better)
Translates to: GTLILLRGLTYCLIRNICPVSSL*RCCTFL
Trigger: CAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGG...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGACCAGTCTCAACTATCTaGCTGAAACCACTGAAGAAT +
Preference number: 2 (lower is better)
Translates to: KRSPDTIRNGESGALRLRPVSTI*LKPLKN
Trigger: ATTCTTCAGTGGTTTCAGGCAGATAGTTGAGACTGG...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCAACCCCATTCTAATTaGAGTCCCACAGATAAGAAG +
Preference number: 2 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHQPHSN*SPTDKK
Trigger: CTTCTTATCTGTGGGACTCCAATTAGAATGGGGTTG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 90 bp ATCCCAGGCACACTTCCCAGAAGGCTCCAAAGTTATTTTTGCTCCTaGGAAAGCAAAGTAGAACATCGAAGTAGTGATGTTTTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: IPGTLPRRLQSYFCS*ESKVEHRSSDVFSG
Trigger: TCCTGAGAAAACATCACTACTTCGATGTTCTACTTTGCTTTCCAAGGAGCAAAAATAACTTTGGAGCCTTCTGGGAAGTGTGCCTGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTGGTGGGTTGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVGGLIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCAACCCACC...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGTCTTCCCTCTGCCGGTaGTGCACATTTTTGATGAGC +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKSSLCR*CTFLMS
Trigger: GCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGA...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTCACAGGCTATCTTCTaGTCTCTCACACATGACGGG +
Preference number: 2 (lower is better)
Translates to: GTLILLRGLTYCLIRNICSQAIF*SLTHDG
Trigger: CCCGTCATGTGTGAGAGAGCAGAAGATAGCCTGTGA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTCCCTCTGCCGGTGCTaGACATTTTTGATGAGCTGT +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVSLCRC*TFLMSC
Trigger: ACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGTTGAGATATCAAGGCTaGAGTGACGACAGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKLRYQG*SDDSEP
Trigger: TGGCTCACTGTCGTCACTGCAGCCTTGATATCTCAA...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGAGAGAGCAAATAACTaGCCCATAGTTGCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKERANN*PIVAKW
Trigger: CCACTTTGCAACTATGGGTCAGTTATTTGCTCTCTC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTGGCTCAAGTCAGAATaGGCAGCATCACTCTTGTTC +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVWLKSE*AASLLF
Trigger: GAACAAGAGTGATGCTGCTCATTCTGACTTGAGCCA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTCACTTTAGGGGAGCTTaGACATTGGAATGGGTTCCT +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVHFRGA*TLEWVP
Trigger: AGGAACCCATTCCAATGTCCAAGCTCCCCTAAAGTG...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCGTTTCTTCTGAGCTCTaGGGTAGTAAATGCAAAATT +
Preference number: 2 (lower is better)
Translates to: HSTAYESDSSSAIFKSASVSSEL*GSKCKI
Trigger: AATTTTGCATTTACTACCTCAGAGCTCAGAAGAAAC...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTAGGACTGCCAGGCTCTaGAAGAACAAGCTTTTTATG +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVRTARL*KNKLFM
Trigger: CATAAAAAGCTTGTTCTTTCAGAGCCTGGCAGTCCT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCAATATTTTCACATTCTaGGCAAGCAGGTGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GTLILLRGLTYCLIRNICNIFTF*ASRCEH
Trigger: GTGCTCACACCTGCTTGCTCAGAATGTGAAAATATT...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGAAAGTTATTCTGAGTTaGCACTTTAGGGGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKKVILS*HFRGAW
Trigger: CCAAGCTCCCCTAAAGTGCCAACTCAGAATAACTTT...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 90 bp ATAGTCCTGATTGTGATAGTAGGAAGAGTTCATCATGGGGAATATTaGCCAAGATATAGCACACCTAATAGAACCCAGTTAACATCTCCA +
Preference number: 2 (lower is better)
Translates to: IVLIVIVGRVHHGEY*PRYSTPNRTQLTSP
Trigger: TGGAGATGTTAACTGGGTTCTATTAGGTGTGCTATATCTTGGCAAATATTCCCCATGATGAACTCTTCCTACTATCACAATCAGGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 90 bp CCAGTAACTACTTATAGATTTCTTCAGAAGATTAAACCCAGAATTTaGTGTTTCATGTTCCCAGCTACGAACACAGGTCAGACCGCTTTT +
Preference number: 2 (lower is better)
Translates to: PVTTYRFLQKIKPRI*CFMFPATNTGQTAF
Trigger: AAAAGCGGTCTGACCTGTGTTCGTAGCTGGGAACATGAAACACAAAATTCTGGGTTTAATCTTCTGAAGAAATCTATAAGTAGTTACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR GCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGCTTGGTGCGGTCAGATaGAATCATAAAGAAAGAGTA +
Preference number: 2 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKLGAVR*NHKERV
Trigger: TACTCTTTCTTTATGATTGCATCTGACCGCACCAAG...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTGGGTCTGTAATAAAGTaGCTTACCTCTTTTGGGCAA +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVGSVIK*LTSFGQ
Trigger: TTGCCCAAAAGAGGTAAGCCACTTTATTACAGACCC...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTGTACCAGTAGGTCATaGAGTTCAAGGAATACTGTC +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVCTSRS*SSRNTV
Trigger: GACAGTATTCCTTGAACTCCATGACCTACTGGTACA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR TCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCACAACTAGAAACAACTaGAACTCAGTCTGGTATTTC +
Preference number: 2 (lower is better)
Translates to: GTLILLRGLTYCLIRNICTTRNN*NSVWYF
Trigger: GAAATACCAGACTGAGTTTCAGTTGTTTCTAGTTGT...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCGCACTTTTAAACAGATaGCAAATGACCAGAAGTATG +
Preference number: 2 (lower is better)
Translates to: GTLILLRGLTYCLIRNICALLNR*QMTRSM
Trigger: CATACTTCTGGTCATTTGCCATCTGTTTAAAAGTGC...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTTTAGAAGAGAGAACTaGACAGGAAGTGTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: FQVVLSAACNISLSSKLVFRREN*TGSVRK
Trigger: TTTCCTTACACTTCCTGTCCAGTTCTCTCTTCTAAA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTAACGCATGGCCCACCTaGGTGCGGTCAGATGCAATC +
Preference number: 3 (lower is better)
Translates to: TVSRRTTARAERQYSYTGNAWPT*VRSDAI
Trigger: GATTGCATCTGACCGCACCAAGGTGGGCCATGCGTT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp CACTGGCTCACAGGCTATCTTCTGCTCTCTCACACATaGCGGGTGATGCTCATTGGCACAGTCTCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: HWLTGYLLLSHT*RVMLIGTVSGS
Trigger: GCTGCCAGAGACTGTGCCAATGAGCATCACCCGTCATGTGTGAGAGAGCAGAAGATAGCCTGTGAGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 72 bp AGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTaGCCCGTATCTTCCCTCTGCCGGTGCTGCACATTT +
Preference number: 3 (lower is better)
Translates to: RAHPHGSIRKHI*PVSSLCRCCTF
Trigger: AAATGTGCAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 72 bp AGGTGGGAGGATCACTTGGGCTTGAGATATCAAGGCTaGAGTGACGACAGTGAGCCACGTTCACACCATTGC +
Preference number: 3 (lower is better)
Translates to: RWEDHLGLRYQG*SDDSEPRSHHC
Trigger: GCAATGGTGTGAACGTGGCTCACTGTCGTCACTGCAGCCTTGATATCTCAAGCCCAAGTGATCCTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp TCTTCTGCTCTCTCACACATGACGGGTGATGCTCATTaGCACAGTCTCTGGCAGCCTAGCCCTAATTCCACC +
Preference number: 3 (lower is better)
Translates to: SSALSHMTGDAH*HSLWQPSPNST
Trigger: GGTGGAATTAGGGCTAGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGTCATGTGTGAGAGAGCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp GCAATCCAGCATGTTAAGCAGCAATGTGACTCTTCCTaGCAAGCAGATGCACACCAGGGCACATCCCCATGG +
Preference number: 3 (lower is better)
Translates to: AIQHVKQQCDSS*QADAHQGTSPW
Trigger: CCATGGGGATGTGCCCTGGTGTGCATCTGCTTGTCAGGAAGAGTCACATTGCTGCTTAACATGCTGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCGGTGCTGCACATTTTaGATGAGCTGTACCCATTTC +
Preference number: 3 (lower is better)
Translates to: SRCTPGHIPMEASGSTFARCCTF*MSCTHF
Trigger: GAAATGGGTACAGCTCATCAAAAATGTGCAGCACCG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 72 bp AGCATCAGGAAGCACATTTGCCCCGTATCTTCCCTCTaGCGGTGCTGCACATTTTTGATGAGCTGTACCCAT +
Preference number: 3 (lower is better)
Translates to: SIRKHICPVSSL*RCCTFLMSCTH
Trigger: ATGGGTACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp TCACACATGACGGGTGATGCTCATTGGCACAGTCTCTaGCAGCCTAGCCCTAATTCCACCTATTCCATTCAG +
Preference number: 3 (lower is better)
Translates to: SHMTGDAHWHSL*QPSPNSTYSIQ
Trigger: CTGAATGGAATAGGTGGAATTAGGGCTAGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGTCATGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp TTTAGTAGAGGTGGAATTTCACCATGTTGGCCAGGATaGTCTCGATCTCTTGATCCATCCACCTCGGCCTCC +
Preference number: 3 (lower is better)
Translates to: FSRGGISPCWPG*SRSLDPSTSAS
Trigger: GGAGGCCGAGGTGGATGGATCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAATTCCACCTCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTACCCGATCTAACTCATaGGTTCCTGAAGGAATGACT +
Preference number: 3 (lower is better)
Translates to: TVSRRTTARAERQYSYTGTRSNS*VPEGMT
Trigger: AGTCATTCCTTCAGGAACCAATGAGTTAGATCGGGT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 72 bp AGGAAGCACATTTGCCCCGTATCTTCCCTCTGCCGGTaGTGCACATTTTTGATGAGCTGTACCCATTTCTGT +
Preference number: 3 (lower is better)
Translates to: RKHICPVSSLCR*CTFLMSCTHFC
Trigger: ACAGAAATGGGTACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAGACAGTGATAGTGATTaGTATCCTAGCGGCTCACCC +
Preference number: 3 (lower is better)
Translates to: KRSPDTIRNGESGALRLRDSDSD*YPSGSP
Trigger: GGGTGAGCCGCTAGGATACAAATCACTATCACTGTC...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTATGAGTGATAACAATTaGCTAGGCACTATAGGTGAA +
Preference number: 3 (lower is better)
Translates to: TVSRRTTARAERQYSYTGMSDNN*LGTIGE
Trigger: TTCACCTATAGTGCCTAGCAAATTGTTATCACTCAT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp GCCATTTCTTCATCAGGTATAAGACCAAACAACGCATaGCCCACCTTGGTGCGGTCAGATGCAATCATAAAG +
Preference number: 3 (lower is better)
Translates to: AISSSGIRPNNA*PTLVRSDAIIK
Trigger: CTTTATGATTGCATCTGACCGCACCAAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp TCTCAACCATCTGAGTTGACACAATGGAAAATGACCTaGCTCTTTAGGAGACCAGACTCTGACAGCACTGTC +
Preference number: 3 (lower is better)
Translates to: SQPSELTQWKMT*LFRRPDSDSTV
Trigger: GACAGTGCTGTCAGAGTCTGGTCTCCTAAAGAGCCAGGTCATTTTCCATTGTGTCAACTCAGATGGTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGATCAAGCCTGGGATTCTaGCCAAAGACCTTGAATATC +
Preference number: 3 (lower is better)
Translates to: KRSPDTIRNGESGALRLRSSLGF*PKTLNI
Trigger: GATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGA...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCCATCAGGAAGCACATTaGCCCCGTATCTTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: GTLILLRGLTYCLIRNICHQEAH*PRIFPL
Trigger: CAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATG...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp CTAGGTGCATACAGCTGTGACAGGACTGCCAGGCTCTaGAAGAACAAGCTTTTTATGTTAGAAAGGGAGTAT +
Preference number: 3 (lower is better)
Translates to: LGAYSCDRTARL*KNKLFMLEREY
Trigger: ATACTCCCTTTCTAACATAAAAAGCTTGTTCTTTCAGAGCCTGGCAGTCCTGTCACAGCTGTATGCACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp CAGTGGGGAAAGGAGCATTTCAGTTTGCAACATTCCTaGTTAGCATTAGGCAGACATGATTCTGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: QWGKEHFSLQHS*LALGRHDSAGR
Trigger: TCTTCCAGCAGAATCATGTCTGCCTAATGCTAATCAGGAATGTTGCAAACTGAAATGCTCCTTTCCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR GCA 72 bp CCAGGCACACTTCCCAGAAGGCTCCAAAGTTATTTTTaGTCCTTGGAAAGCAAAGTAGAACATCGAAGTAGT +
Preference number: 3 (lower is better)
Translates to: PGTLPRRLQSYF*SLESKVEHRSS
Trigger: ACTACTTCGATGTTCTACTTTGCTTTCCAAGGAGCAAAAATAACTTTGGAGCCTTCTGGGAAGTGTGCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp CAATGGCATAAGTGTAGATCCTGTACCAGTAGGTCATaGAGTTCAAGGAATACTGTCTTTTCTTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: QWHKCRSCTSRS*SSRNTVFSSRW
Trigger: CCACCTGGAAGAAAAGACAGTATTCCTTGAACTCCATGACCTACTGGTACAGGATCTACACTTATGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGTTGACCTGGTACCAGTaGGTCAAGCCTGGGATTCTT +
Preference number: 3 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKLTWYQ*VKPGIL
Trigger: AAGAATCCCAGGCTTGACCAACTGGTACCAGGTCAA...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGTGAGTTTGGAACCCTaGAACCAGGACTTAAAAATA +
Preference number: 3 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHVSLEP*NQDLKI
Trigger: TATTTTTAAGTCCTGGTTCAAGGGTTCCAAACTCAC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp TATCTAAGGACATCTCAACCATCTGAGTTGACACAATaGAAAATGACCTGGCTCTTTAGGAGACCAGACTCT +
Preference number: 3 (lower is better)
Translates to: YLRTSQPSELTQ*KMTWLFRRPDS
Trigger: AGAGTCTGGTCTCCTAAAGAGCCAGGTCATTTTCCATTGTGTCAACTCAGATGGTTGAGATGTCCTTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTACAGTATAAGAATTTaGGGGCCAGGCAAGTGGCTC +
Preference number: 3 (lower is better)
Translates to: GTLILLRGLTYCLIRNICYSIRI*GPGKWL
Trigger: GAGCCACTTGCCTGGCCCCAAAATTCTTATACTGTA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGCATCATGGGGAATATTaGCCAAGATATAGCACACCT +
Preference number: 3 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKHHGEY*PRYSTP
Trigger: AGGTGTGCTATATCTTGGCAAATATTCCCCATGATG...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp GAAGTAAGCAAAGAGAAAACCAAGCTTGGACAGCAGTaGGCCAGAGTAATCCATATAGTGGTAATTTCAGAT +
Preference number: 3 (lower is better)
Translates to: EVSKEKTKLGQQ*ARVIHIVVISD
Trigger: ATCTGAAATTACCACTATATGGATTACTCTGGCTCACTGCTGTCCAAGCTTGGTTTTCTCTTTGCTTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGCTCCAAAGTTATTTTaGCTCCTTGGAAAGCAAAGT +
Preference number: 3 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKAPKLF*LLGKQS
Trigger: ACTTTGCTTTCCAAGGAGCAAAAATAACTTTGGAGC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp ATGACGTCTAGCACTAGTAATGGGTCTGTAATAAAGTaGCTTACCTCTTTTGGGCAAACTGAAAATATGACA +
Preference number: 3 (lower is better)
Translates to: MTSSTSNGSVIK*LTSFGQTENMT
Trigger: TGTCATATTTTCAGTTTGCCCAAAAGAGGTAAGCCACTTTATTACAGACCCATTACTAGTGCTAGACGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR-3UTR CAA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTTTTGGCTTAATCACTaGTATAAAATAAGGACCGGC +
Preference number: 3 (lower is better)
Translates to: GTLILLRGLTYCLIRNICFWLNH*YKIRTG
Trigger: GCCGGTCCTTATTTTATACAAGTGATTAAGCCAAAA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp ACTTGGAAAAGAAGCAATCTTTGGTTTCCTGGTCAATaGAGAACTTTGCTGAAAGAAGATATTCCCATTCAG +
Preference number: 3 (lower is better)
Translates to: TWKRSNLWFPGQ*RTLLKEDIPIQ
Trigger: CTGAATGGGAATATCTTCTTTCAGCAAAGTTCTTCATTGACCAGGAAACCAAAGATTGCTTCTTTTCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR TCA 72 bp ATCTTTAGGAAGTTCAAAGTGAAAATGATCAGAGGCTaGCATAGTAAAGACATAAAAAGGTGTGGCAGTACT +
Preference number: 3 (lower is better)
Translates to: IFRKFKVKMIRG*HSKDIKRCGST
Trigger: AGTACTGCCACACCTTTTTATGTCTTTACTATGTCAGCCTCTGATCATTTTCACTTTGAACTTCCTAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CCA 72 bp AAAACAAACTTGGAAAAGAAGCAATCTTTGGTTTCCTaGTCAATGAAGAACTTTGCTGAAAGAAGATATTCC +
Preference number: 3 (lower is better)
Translates to: KTNLEKKQSLVS*SMKNFAERRYS
Trigger: GGAATATCTTCTTTCAGCAAAGTTCTTCATTGACCAGGAAACCAAAGATTGCTTCTTTTCCAAGTTTGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCGCGGGGCAGAGACCTaGTCCGGCGGCGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVRGAET*SGGGQQ
Trigger: CTGTTGCCCGCCGCCGGAGCAGGTCTCTGCCCCGCG...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCGACACCCCAGCAACTaGTCCTCCGGGACGCCTAGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFARHPSN*SSGTPR
Trigger: CCTAGGCGTCCCGGAGGAGCAGTTGCTGGGGTGTCG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGTCCAGGAGAGGAATaGGGCAGGAGCAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFASPGEE*GRSRAR
Trigger: CCGCGCCCTGCTCCTGCCGCATTCCTCTCCTGGACT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGTGAGCTGAGACCGTaGCACTGCACTCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFASELRP*HCTPAG
Trigger: CCCGGCTGGAGTGCAGTGGCACGGTCTCAGCTCACT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCACTGCGCTCCAGCCTaGGTGACCGAGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVHCAPA*VTERDS
Trigger: GGAGTCCCTCTCGGTCACCCAGGCTGGAGCGCAGTG...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCGTGCGGGCAATTTCCTaGGACTGCAGTCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTVRAIS*DCSPGE
Trigger: CTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCAC...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCTCACCCAGGCTGGGATaGAGTGGCTTCACACAGCTC +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTSPRLG*SGFTQL
Trigger: GAGCTGTGTGAAGCCACTGCATCCCAGCCTGGGTGA...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCTGGGAGGCGGAGATTaGAGTGAGCTGAGACCGTGC +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGLGGGD*SELRPC
Trigger: GCACGGTCTCAGCTCACTGCAATCTCCGCCTCCCAG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp CAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTaGCCCCGTATCTTCCCTCTGCCGGTGCTGCACATT +
Preference number: 4 (lower is better)
Translates to: QGTSPWKHQEAH*PRIFPLPVLHI
Trigger: AATGTGCAGCACCGGCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCTACCATCTAAAGGCATaGAAGGAGCAGACGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTYHLKA*KEQTQR
Trigger: GCGCTGCGTCTGCTCCTTGCATGCCTTTAGATGGTA...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTTCCTCGGGCATGACGTaGATGCGTCTTTCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVSSGMT*MRLSRA
Trigger: GGCTCGAGAAAGACGCATGCACGTCATGCCCGAGGA...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCTTTTCCCCCTCGACCTaGACGTGGCCTAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAFSPST*TWPRRA
Trigger: AGCTCTTCTAGGCCACGTCCAGGTCGAGGGGGAAAA...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCTCTGTCACCCAGGCTaGGATGCAGTGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVLCHPG*DAVASH
Trigger: GTGTGAAGCCACTGCATCCCAGCCTGGGTGACAGAG...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCGAGCGGTCTGGGCAATaGAGAGTAACCGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAERSGQ*RVTEKA
Trigger: TGCTTTCTCGGTTACTCTTCATTGCCCAGACCGCTC...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCACAGTGGACATGGGTaGATCACTGCTGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGHSGHG*ITAAHC
Trigger: GCAGTGAGCAGCAGTGATTCACCCATGTCCACTGTG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCCAATGTGACTCTTCCTaGCAAGCAGATGCACACCAG +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTQCDSS*QADAHQ
Trigger: CTGGTGTGCATCTGCTTGTCAGGAAGAGTCACATTG...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAGCGCTCCAGCCTGGGTaGCCGAGAGGGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRALQPG*PRGTPS
Trigger: AGATGGAGTCCCTCTCGGTCACCCAGGCTGGAGCGC...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACGAGATGCTCGGTGGCTaGACTGTCTCCCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNEMLGG*TVSRSP
Trigger: GGGGCTTCGGGAGACAGTGCAGCCACCGAGCATCTC...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACGCCCTCCAGCTCGGTaGGGGCAATTTCCTGCGACT +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPRPPAR*GQFPAT
Trigger: AGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGGCG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCTGAGGCAAGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFALRQEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCTTGCCTCAG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCAAACAGCTCAAGAAGTaGTGCTGCCCATGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTKQLKK*CCPWEN
Trigger: GTTCTCCCATGGGCAGCAGCACTTCTTGAGCTGTTT...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTACGCATGGCCCACCTTaGTGCGGTCAGATGCAATCA +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVTHGPP*CGQMQS
Trigger: TGATTGCATCTGACCGCACCAAGGTGGGCCATGCGT...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCCCATGTTGGCCAGGATaGTCTCGATCTCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTPCWPG*SRSLDP
Trigger: TGGATCAAGAGATCGAGACCATCCTGGCCAACATGG...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTCCCTCGACCTGGACGTaGCCTAGAAGAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLPSTWT*PRRAAC
Trigger: GCAGGCAGCTCTTCTAGGCCACGTCCAGGTCGAGGG...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCACCGCTCATCTGTGTaGAGGGAAGTTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAHRSSV*REVSSH
Trigger: GTGAGAAGAAACTTCCCTCCACACAGATGAGCGGTG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp TGCCCCGTATCTTCCCTCTGCCGGTGCTGCACATTTTaGATGAGCTGTACCCATTTCTGTCAGCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CPVSSLCRCCTF*MSCTHFCQLLP
Trigger: TGGCAACAGCTGACAGAAATGGGTACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTTGATGAAGTTGTGGTaGCTCATGGACTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGLMKLW*LMDWLL
Trigger: CAGCAGCCAGTCCATGAGTCACCACAACTTCATCAA...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCAAGCTTGGACAGCAGTaGGCCAGAGTAATCCATATA +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTKLGQQ*ARVIHI
Trigger: TATATGGATTACTCTGGCTCACTGCTGTCCAAGCTT...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGCGGGGTCGACGGCCTaGGACACACGGCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKAGSTA*DTRPDG
Trigger: TCCGTCAGGCCGTGTGTCCCAGGCCGTCGACCCCGC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCCAGTTGGTCAAGCCTaGGATTCTTGCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGPVGQA*DSCQRP
Trigger: AGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCGAGAGAGCAAATAACTaGCCCATAGTTGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAERANN*PIVAKW
Trigger: CCACTTTGCAACTATGGGTCAGTTATTTGCTCTCTC...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTGTATGTATTCCTCCTaGAAGTGGTCATTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGCMYSS*KWSLGG
Trigger: GCCCCCTAATGACCACTTTCAGGAGGAATACATACA...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAAGCTACTCAGGTGGTTaGGGTGGGAGGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPSYSGG*GGRITW
Trigger: CCAAGTGATCCTCCCACCTCAACCACCTGAGTAGCT...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGAGGCCAAGGTGGGTTaGTCACTTGAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPEAKVG*SLEVRS
Trigger: ACTCCTGACCTCAAGTGATCAACCCACCTTGGCCTC...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCCCAGATCAAAGAAGTaGCAACAACACAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVPRSKK*QQHSRP
Trigger: TGGTCTGCTGTGTTGTTGGCACTTCTTTGATCTGGG...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCATTCCACACGGGCCGCTaGAATGTTTCACCGCTCATC +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPFHTGR*NVSPLI
Trigger: GATGAGCGGTGAAACATTGCAGCGGCCCGTGTGGAA...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTTGAGATATCAAGGCTaGAGTGACGACAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGLRYQG*SDDSEP
Trigger: TGGCTCACTGTCGTCACTGCAGCCTTGATATCTCAA...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAAGCAGAGATGCTCGGTaGCTGCACTGTCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRSRDAR*LHCLPK
Trigger: CTTCGGGAGACAGTGCAGCCACCGAGCATCTCTGCT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAAGGAGTCAAGCCCTTaGAATGTAAGACCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAKESSP*NVRPST
Trigger: TGTGGAAGGTCTTACATTCCAAGGGCTTGACTCCTT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGTAGCCACTTCAAATaGCAGTCACAGAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFASSHFK*QSQSKL
Trigger: CAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACAGACCAAACAACGCATaGCCCACCTTGGTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNRPNNA*PTLVRS
Trigger: TGACCGCACCAAGGTGGGCCATGCGTTGTTTGGTCT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTAGAGAAAACCAAGCTTaGACAGCAGTGAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGRENQA*TAVSQS
Trigger: ACTCTGGCTCACTGCTGTCCAAGCTTGGTTTTCTCT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTGAGAGGGGGAGGAAATaGAAGGAATTTCCAAACAAG +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGERGRK*KEFPNK
Trigger: CTTGTTTGGAAATTCCTTTCATTTCCTCCCCCTCTC...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGGCAAGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHGKQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCTTGCC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCTCACACATGACGGGTaGTGCTCATTGGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNLTHDG*CSLAQS
Trigger: AGACTGTGCCAATGAGCATCACCCGTCATGTGTGAG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCTGCTCTCTCACACATaGCGGGTGATGCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHLLSHT*RVMLIG
Trigger: GCCAATGAGCATCACCCGTCATGTGTGAGAGAGCAG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGACCGGCCTCCTACATaGTGTTTTCTAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPDRPPT*CFLEHW
Trigger: CCAGTGCTCTAGAAAACATCATGTAGGAGGCCGGTC...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCGGATGTGGCATAAAATaGCAGCAAATTTACCTCTGT +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTGCGIK*QQIYLC
Trigger: ACAGAGGTAAATTTGCTGTCATTTTATGCCACATCC...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCCTTTACTCCTTTATCTaGAAACAGGCACAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTLYSFI*KQAQVK
Trigger: CTTGACTTGTGCCTGTTTTCAGATAAAGGAGTAAAG...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGGGTAAAACTGGAGTaGCTGTGCATTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFARVKLE*LCIYFW
Trigger: CCAGAAATAAATGCACAGGCACTCCAGTTTTACCCT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAACATGGGTGAATCACTaGTGCTCACTGCAGTGCACG +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPTWVNH*CSLQCT
Trigger: CGTGCACTGCAGTGAGCAGCAGTGATTCACCCATGT...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCATTGCTGATGACTGCCTaGCTCAGAGTTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPLLMTA*LRVAVA
Trigger: GGCTACAGCAACTCTGAGGCAGGCAGTCATCAGCAA...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCCCGTATCTTCCCTCTaGCGGTGCTGCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNPVSSL*RCCTFL
Trigger: CAAAAATGTGCAGCACCGGCAGAGGGAAGATACGGG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCTTAGCCTCTCAAAATaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVLSLSK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCATTTTGAGAGGCTAAG...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGACTGGGAGGCGGAGGTTaGAGTAAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRLGGGG*SKPRSC
Trigger: GCATGATCTTGGCTTACTGCAACCTCCGCCTCCCAG...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTTCACTTATCCTCTCATaGTTGGTGGGAAAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVSLILS*LVGKAD
Trigger: ATCTGCCTTTCCCACCAACCATGAGAGGATAAGTGA...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGCACAGCTACTCAGGTaGTTGAGGTGGGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHAQLLR*LRWEDH
Trigger: GTGATCCTCCCACCTCAACCACCTGAGTAGCTGTGC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAAAGTTATTCTGAGTTaGCACTTTAGGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAKVILS*HFRGAW
Trigger: CCAAGCTCCCCTAAAGTGCCAACTCAGAATAACTTT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCAACCCCATTCTAATTaGAGTCCCACAGATAAGAAG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAQPHSN*SPTDKK
Trigger: CTTCTTATCTGTGGGACTCCAATTAGAATGGGGTTG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCATATTATATTTGAGCTaGGGTCTAAACTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTILYLS*GLNSPE
Trigger: CTCTGGAGAGTTTAGACCTCAGCTCAAATATAATAT...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTACAATGATGAGAAGCTaGTTGGCTGCAGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGTMMRS*LAAAKK
Trigger: TTTCTTTGCTGCAGCCAATCAGCTTCTCATCATTGT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAGGTGCATACAGCTGTaGCAGGACTGCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASRCIQL*QDCQAL
Trigger: CAGAGCCTGGCAGTCCTGTCACAGCTGTATGCACCT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCGGCAAACTGAAAATATaGCAGGAAGTAAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAGKLKI*QEVSKE
Trigger: CTCTTTGCTTACTTCCTGTCATATTTTCAGTTTGCC...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACCCACAAGAATCAGGTaGAAACAGAGGTGGATGACG +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPPTRIR*KQRWMT
Trigger: CGTCATCCACCTCTGTTTTCACCTGATTCTTGTGGG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGTTTGCAACATTCCTaGTTAGCATTAGGCAGACAT +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFASLQHS*LALGRH
Trigger: ATGTCTGCCTAATGCTAATCAGGAATGTTGCAAACT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGGTGGGTTGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHGGLIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCAACCCACC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCTCAGAGTCACATTCATaGCTCTTAGAGCAATTATGG +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFASESHS*LLEQLW
Trigger: CCATAATTGCTCTAAGAGGCATGAATGTGACTCTGA...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTCCTGCTGTATTTTGTaGCATGCAGCTATAGATTCC +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGSCCIL*HAAIDS
Trigger: GGAATCTATAGCTGCATGGCACAAAATACAGCAGGA...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAATCAGGAAGCACATTTaGCCCGTATCTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPIRKHI*PVSSLC
Trigger: GCAGAGGGAAGATACGGGGCAAATGTGCTTCCTGAT...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAAGGGTCTCACCATGTTaGCCAGCCTGGTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPRVSPC*PAWSQI
Trigger: AATTTGAGACCAGGCTGGGCAACATGGTGAGACCCT...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTCAGCTCAAGAAGTGCTaGTGCCCATGGGAGAACACT +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLQLKKC*CPWENT
Trigger: AGTGTTCTCCCATGGGCAGCAGCACTTCTTGAGCTG...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACCTAAGTGGGGAGATTaGTTGAGCCCAGGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPPKWGD*LSPGVC
Trigger: ACAAACTCCTGGGCTCAAGCAATCTCCCCACTTAGG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCTTGAAGATCTTAGGTaGAATCATGCTCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFALEDLR*NHAHSV
Trigger: AACCGAATGAGCATGATTCCACCTAAGATCTTCAAG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCCTCTTAGAGCAATTATaGTTTCAGGATGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: CSGFTQLTAALISRAQVTLLEQL*FQDVSL
Trigger: TAAGGACACATCCTGAAACCATAATTGCTCTAAGAG...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTGCCACACAGTGGACATaGGTGAATCACTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLATQWT*VNHCCS
Trigger: TGAGCAGCAGTGATTCACCCATGTCCACTGTGTGGC...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTAGCAATATAGGTGTATaGACAGTATTCTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGSNIGV*TVFSGP
Trigger: AGGACCCGAGAATACTGTCCATACACCTATATTGCT...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTaGAATATCAAAGCCCCAGTCTCAACTATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKT*NIKAPVSTICL
Trigger: CAGGCAGATAGTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTTACTTGCAAATAACCTaGGTGATGAAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVYLQIT*VMKITG
Trigger: GCCTGTAATCTTCATCACTCAGGTTATTTGCAAGTA...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACTGGCTCAAGTCAGAATaGGCAGCATCACTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNWLKSE*AASLLF
Trigger: GAACAAGAGTGATGCTGCTCATTCTGACTTGAGCCA...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGGATTTCACTGTCTTTaGGCCACACAGTGGACATGG +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHGFHCL*ATQWTW
Trigger: CCATGTCCACTGTGTGGCGCAAAGACAGTGAAATCC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTGCCTGCCTCAGAGTTaGTGTAGCCTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASCLPQS*CSLPVA
Trigger: AGCCACAGGAAGGCTACAGCAACTCTGAGGCAGGCA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCGTCTGGCTCTCTCCCTaGCAGGCCCTCATTTTGATG +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASVWLSP*QALILM
Trigger: CATCAAAATGAGGGCCTGGCAGGGAGAGAGCCAGAC...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCCAATCACTAAGTAGCTaGCTCTATAGATACACTTCT +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAQSLSS*LYRYTS
Trigger: AGAAGTGTATCTATAGAGGCAGCTACTTAGTGATTG...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAATGGATGTGGCCCAGTaGAGAAGTCGGATGGACAAA +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRMDVAQ*RSRMDK
Trigger: TTTGTCCATCCGACTTCTGCACTGGGCCACATCCAT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACTGCCCAATGCTACTCTaGGAAGAGTCACAATTGGGG +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHCPMLL*EESQLG
Trigger: CCCCAATTGTGACTCTTCCCAGAGTAGCATTGGGCA...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACAAAATTAGCCGGGCATaGTGGTGGGCGTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNKISRA*WWASVI
Trigger: AATTACAGACGCCCACCACCATGCCCGGCTAATTTT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTCCCGAAGCCCCGGCTaGAGGCTGTACCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICSRSPG*RLYHLK
Trigger: CTTTAGATGGTACAGCCTTCAGCCGGGGCTTCGGGA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCACAATCAGAAATGGTaGATCTGGGGCACTGAGACT +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHHNQKW*IWGTET
Trigger: AGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAGCTAGGCACTATAGGTaGAGTACAGAAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRARHYR*STEELL
Trigger: CAGCAACTCTTCTGTACTTCACCTATAGTGCCTAGC...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGGCAGAAGAAGGGCTTaGACTCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKGRRRA*TREAEV
Trigger: AACCTCTGCCTCCCGAGTTCAAGCCCTTCTTCTGCC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTGTACAAGTTGCGGAGTaGCAGAAAGCCAATGGCATA +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLVQVAE*QKANGI
Trigger: TATGCCATTGGCTTTCTGTCACTCCGCAACTTGTAC...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCATCACTGCTGCTCACTaGAGTGCACGTCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASITAAH*SARQSH
Trigger: GTGACTCTGACGTGCACTGCAGTGAGCAGCAGTGAT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTCATCTTCATGCCCAATaGTACTCTGGGAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLHLHAQ*YSGKSH
Trigger: GTGACTCTTCCCAGAGTAGCATTGGGCATGAAGATG...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCGTAGCTGGGAATGTCTaGAGGCAGATTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASVAGNV*RQIELL
Trigger: GAGGAGCTCAATCTGCCTGCAGACATTCCCAGCTAC...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGACATGCCTATAATCCCTaGACTTTGGGAGGCCTAAGT +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRHAYNP*TLGGLS
Trigger: ACTTAGGCCTCCCAAAGTGCAGGGATTATAGGCATG...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTGTCTCTTTAGGCATTTaGACCATGAGGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLVSLGI*TMRLDS
Trigger: ACTGTCCAGCCTCATGGTCCAAATGCCTAAAGAGAC...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCCAGGGCACATCCCCATaGAAGCATCAGGAAGCACAT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASQGTSP*KHQEAH
Trigger: ATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTG...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCTTGCAGACTCAAATATaGACAGTGATAGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: SRCTPGHIPMEASGSTFALQTQI*TVIVIC
Trigger: ACAAATCACTATCACTGTCCATATTTGAGTCTGCAA...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTGTTTTTGTAGCTTTTaGAACATGGAATGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TVSRRTTARAERQYSYTGCFCSF*NMECLS
Trigger: GGAAAGGCATTCCATGTTCCAAAAGCTACAAAAACA...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTAAAAGCTGGAAATGGTaGTGTGCCTGTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLKSWKW*CACNPS
Trigger: GCTGGGATTACAGGCACACCACCATTTCCAGCTTTT...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTTCCAAGAATTGGAGGTaGGGCAGCTTGAAGATCTTA +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLSKNWR*GSLKIL
Trigger: TAAGATCTTCAAGCTGCCTCACCTCCAATTCTTGGA...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGTTCTGCCAGGAAATCTaGGGTGCAGGGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKFCQEI*GAGCPS
Trigger: AGAGGGACACCCTGCACCTCAGATTTCCTGGCAGAA...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAATTGTCATAACAATCTaGGCAAATCACCCGGGTACC +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRIVITI*ANHPGT
Trigger: GGTACCCGGGTGATTTGCTCAGATTGTTATGACAAT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCTGGGATTACAGGTGTaGGCCACAGTTTTTATACTT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNLGLQV*ATVFIL
Trigger: AAGTATAAAAACTGTGGCTCACACCTGTAATCCCAG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTTGGTTCCTGAAGGAATaGCTGAACCTTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLWFLKE*LNLPQS
Trigger: TGATTGAGGAAGGTTCAGTCATTCCTTCAGGAACCA...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACAATATTTTCACATTCTaGGCAAGCAGGTGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNNIFTF*ASRCEH
Trigger: GTGCTCACACCTGCTTGCTCAGAATGTGAAAATATT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAAGTGGAGAATCAGCCTaGAAGGGGACAAACAAATCA +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRSGESA*KGTNKS
Trigger: TGATTTGTTTGTCCCCTTTCAGGCTGATTCTCCACT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTGAGATTGCAGTGAGCTaGGACCGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVEIAVS*DRATAL
Trigger: GAGTGCAGTGGCACGGTCTCAGCTCACTGCAATCTC...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTGCTGCTCACTGCAGTaGACGTCAGAGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASCCSLQ*TSESHS
Trigger: TGAATGTGACTCTGACGTGCACTGCAGTGAGCAGCA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGAGAAGCTGATTGGCTaGAGCAAAGAAATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHEKLIG*SKEMSF
Trigger: GAACGACATTTCTTTGCTGCAGCCAATCAGCTTCTC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCAGTGCCACCGTCAGTaGCTTTGTGTATATATCCAT +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHQCHRQ*LCVYIH
Trigger: ATGGATATATACACAAAGGCACTGACGGTGGCACTG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTCCCTCTGCCGGTGCTaGACATTTTTGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASSLCRC*TFLMSC
Trigger: ACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTAGTTCGGATAGTCTTTaGCAGAACTCCCATGCATCA +
Preference number: 4 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLSSDSL*QNSHAS
Trigger: TGATGCATGGGAGTTCTGCCAAAGACTATCCGAACT...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTAGAAGCAGAACAGTCTaGCTCTCTCCCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVRSRTV*LSPCQA
Trigger: GGCCTGGCAGGGAGAGAGCCAGACTGTTCTGCTTCT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTCAGGCTGGGATGCAGTaGCTTCACACAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVQAGMQ*LHTAHC
Trigger: GCAGTGAGCTGTGTGAAGCCACTGCATCCCAGCCTG...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCACGGGTGATGCTCATTaGCACAGTCTCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICTGDAH*HSLWQP
Trigger: AGGCTGCCAGAGACTGTGCCAATGAGCATCACCCGT...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCATTAGCCGGGTGTGGTaGCACAGCTACTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICISRVW*HSYSGG
Trigger: ACCACCTGAGTAGCTGTGCCACCACACCCGGCTAAT...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCATCTGCCAACTGTATaGGCAAAGAGATCACGTAAT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNHLPTV*AKRSRN
Trigger: ATTACGTGATCTCTTTGCCCATACAGTTGGCAGATG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp AGATTTGCAGACTCAAATATGGACAGTGATAGTGATTaGTATCCTAGCGGCTCACCCCAGTCAGAACATGGC +
Preference number: 4 (lower is better)
Translates to: RFADSNMDSDSD*YPSGSPQSEHG
Trigger: GCCATGTTCTGACTGGGGTGAGCCGCTAGGATACAAATCACTATCACTGTCCATATTTGAGTCTGCAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGATTAGACAACCGATTATaGCTGAAATCCAGGATAGCG +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRLDNRL*LKSRIA
Trigger: CGCTATCCTGGATTTCAGTCATAATCGGTTGTCTAA...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACATCAGCAATATGAGTaGCTCTGTTGTCTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPHQQYE*LCCLLN
Trigger: ATTTAGGAGACAACAGAGTCACTCATATTGCTGATG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTGGGAAAAAGGAGGATaGGGCAGGCCTAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICWEKGG*GRPSSL
Trigger: CAGAGAACTAGGCCTGCCTCATCCTCCTTTTTCCCA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCACATATATTTACAATaGCATCCCTGGGCAATAGGG +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHHIYLQ*HPWAIG
Trigger: CCCTATTGCCCAGGGATGTCATTGTAAATATATGTG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCATGGTTTCCTGGTCAATaGAGAACTTTGCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPWFPGQ*RTLLKE
Trigger: TTCTTTCAGCAAAGTTCTTCATTGACCAGGAAACCA...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCAGTGGGGAGATTGCTTaGGCCCAGGAGTTTGTGATC +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICSGEIA*AQEFVI
Trigger: GATCACAAACTCCTGGGCTCAAGCAATCTCCCCACT...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACAGTCACAGAGCAAACTaGTTGTGTTCAGAATCAGTT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNSHRAN*LCSESV
Trigger: AACTGATTCTGAACACAAGCAGTTTGCTCTGTGACT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCTTGGTGCGGTCAGATaGAATCATAAAGAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNLGAVR*NHKERV
Trigger: TACTCTTTCTTTATGATTGCATCTGACCGCACCAAG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACAGGGCAGTAGTATCCTaGGGAGGATGTACTAAATAT +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHRAVVS*GGCTKY
Trigger: ATATTTAGTACATCCTCCCCAGGATACTACTGCCCT...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCACCCCAGTCAGAACATaGCAAGAGCAAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASTPVRT*QEQSHR
Trigger: TCTGTGACTTTGCTCTTGCCATGTTCTGACTGGGGT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGGGTCTGTAATAAAGTaGCTTACCTCTTTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHGSVIK*LTSFGQ
Trigger: TTGCCCAAAAGAGGTAAGCCACTTTATTACAGACCC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTAGGCTGGACAGTGTCTaGTCAAGAACGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVRLDSV*SRTSSS
Trigger: TGAGGAGGACGTTCTTGATCAGACACTGTCCAGCCT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACGTTTCTTCTGAGCTCTaGGGTAGTAAATGCAAAATT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNVSSEL*GSKCKI
Trigger: AATTTTGCATTTACTACCTCAGAGCTCAGAAGAAAC...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAGGACTGCCAGGCTCTaGAAGAACAAGCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASRTARL*KNKLFM
Trigger: CATAAAAAGCTTGTTCTTTCAGAGCCTGGCAGTCCT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTGGGTGAATCACTGCTaGTCACTGCAGTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVWVNHC*SLQCTS
Trigger: TGACGTGCACTGCAGTGAGCAGCAGTGATTCACCCA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCGACTCCCTCCAGCTATaGACTGTAACACCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICDSLQL*TVTPQF
Trigger: AAACTGCGGTGTTACAGTGCATAGCTGGAGGGAGTC...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTCTTCCCTCTGCCGGTaGTGCACATTTTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICSSLCR*CTFLMS
Trigger: GCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAGGACTACAGCAGCATaGCACAATGTCCACCTATTT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASRTTAA*HNVHLF
Trigger: AAATAGGTGGACATTGTGGCATGCTGCTGTAGTCCT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACTGGTATAAAACTGAATaGCACAATCTCAACCCCATT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNWYKTE*HNLNPI
Trigger: AATGGGGTTGAGATTGTGGCATTCAGTTTTATACCA...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAAACCAGCCTCCAAGGTaGTTATTCTGTTATTACTTA +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPNQPPR*LFCYYL
Trigger: TAAGTAATAACAGAATAACCACCTTGGAGGCTGGTT...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAATGTGTCCTTATCTGTaGCTTGAGAAAATCATCACA +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPMCPYL*LEKIIT
Trigger: TGTGATGATTTTCTCAAGCCACAGATAAGGACACAT...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTCTTTGCGCCACACAGTaGACATGGGTGAATCACTGC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVLCATQ*TWVNHC
Trigger: GCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAG...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCCAGCACATTCTAATCTaGCCATGGCACCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICQHILI*PWHQCE
Trigger: TTCGCACTGGTGCCATGGCCAGATTAGAATGTGCTG...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAGTATTCTCGGGTCCTaGAGTAGATGTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASSILGS*SRCWHC
Trigger: ACAATGCCAACATCTACTCCAGGACCCGAGAATACT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTCCTCTCATGGTTGGTaGGAAAGGCAGATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVSSHGW*ERQMAL
Trigger: GAGAGCCATCTGCCTTTCCCACCAACCATGAGAGGA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACAGGAAGAGTTCATCATaGGGAATATTTGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNRKSSS*GIFAKI
Trigger: TATCTTGGCAAATATTCCCCATGATGAACTCTTCCT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCCCATAGTTGCAAAGTaGCATGTTTTTGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNPIVAK*HVFVAF
Trigger: AAAAGCTACAAAAACATGCCACTTTGCAACTATGGG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACGCTCCTCTGTGTTTGTaGTACTATAGTCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHAPLCL*YYSLHF
Trigger: AAAATGAAGACTATAGTATCACAAACACAGAGGAGC...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTCTGAGCAAGCAGGTGTaGGCACCTATTTCACTACCA +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVLSKQV*APISLP
Trigger: TGGTAGTGAAATAGGTGCTCACACCTGCTTGCTCAG...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAAGAGAAAGCACAAAGTaGACACAACTAGAAACAACT +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRRESTK*TQLETT
Trigger: AGTTGTTTCTAGTTGTGTTCACTTTGTGCTTTCTCT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAGCATTAGGCAGACATaGTTCTGCTGGAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASSIRQT*FCWKKY
Trigger: GTATTTCTTCCAGCAGAATCATGTCTGCCTAATGCT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAAACCTACCTTACTACTaGCAAAACCTTCAGATGATT +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRNLPYY*QNLQMI
Trigger: AATCATCTGAAGGTTTTGTCAGTAGTAAGGTAGGTT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAAAACTGGAGTGCCTGTaGATTTATTTCTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRKLECL*IYFWDY
Trigger: ATAATCCCAGAAATAAATGCACAGGCACTCCAGTTT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTACATTCAGGATGCTTTaGCCTGCTAGCCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVTFRML*PASHSG
Trigger: CCCTGAATGGCTAGCAGGGCAAAGCATCCTGAATGT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGCAGCCATCATCTTCATaGCCAATGCTACTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKQPSSS*PMLLWE
Trigger: TTCCCAGAGTAGCATTGGGCATGAAGATGATGGCTG...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACTCCAAAGTTATTTTTaGTCCTTGGAAAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPLQSYF*SLESKV
Trigger: TACTTTGCTTTCCAAGGAGCAAAAATAACTTTGGAG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTCACAGGCTATCTTCTaGTCTCTCACACATGACGGG +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVSQAIF*SLTHDG
Trigger: CCCGTCATGTGTGAGAGAGCAGAAGATAGCCTGTGA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCGTTTTCAGAAAAGATaGCATCTCATTTACAGTCAG +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHRFQKR*HLIYSQ
Trigger: CTGACTGTAAATGAGATGCCATCTTTTCTGAAAACG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCCAAAAATCTTTGACCTaGTACCAGTTGGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASQKSLT*YQLVKP
Trigger: AGGCTTGACCAACTGGTACCAGGTCAAAGATTTTTG...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCAATCTTTGGTTTCCTaGTCAATGAAGAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHQSLVS*SMKNFA
Trigger: AGCAAAGTTCTTCATTGACCAGGAAACCAAAGATTG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGATTTAGAAGAGAGAACTaGACAGGAAGTGTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRFRREN*TGSVRK
Trigger: TTTCCTTACACTTCCTGTCCAGTTCTCTCTTCTAAA...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTGCTCTAGAGAGCAATaGGTGGTTTTTCAACTGAGT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASCSREQ*VVFQLS
Trigger: ACTCAGTTGAAAAACCACCCATTGCTCTCTAGAGCA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCGGGGAGCTTGGACATTaGAATGGGTTCCTGCTATTT +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICGELGH*NGFLLF
Trigger: AAATAGCAGGAACCCATTCCAATGTCCAAGCTCCCC...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCCACTTTAGGGGAGCTTaGACATTGGAATGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICHFRGA*TLEWVP
Trigger: AGGAACCCATTCCAATGTCCAAGCTCCCCTAAAGTG...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp TTCACAAGAATACAAAAATCTTTGACCTGGTACCAGTaGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAA +
Preference number: 4 (lower is better)
Translates to: FTRIQKSLTWYQ*VKPGILAKDLE
Trigger: TTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGTACCAGGTCAAAGATTTTTGTATTCTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTATTTATTTTACTTTTaGGCCAGGGCCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASYLFYF*ARASLC
Trigger: ACAGAGTGAGGCCCTGGCTCAAAAGTAAAATAAATA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCATGACCCCTGGTAAATaGGACAGAGATTTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASMTPGK*DRDFLE
Trigger: TTCTAGAAAATCTCTGTCTCATTTACCAGGGGTCAT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACCTAATTCCATTCCGCTaGATTTTCAAAGATCTTAAG +
Preference number: 4 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHLIPFR*IFKDLK
Trigger: CTTAAGATCTTTGAAAATGCAGCGGAATGGAATTAG...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTGATCCACATTCAGGATaGTTTGCCCTGCTAGCCATT +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVDPHSG*FALLAI
Trigger: AATGGCTAGCAGGGCAAAGCATCCTGAATGTGGATC...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCAGCATTCAGACATTCTaGTCTAGAGAGCAATGGGTG +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICSIQTF*SREQWV
Trigger: CACCCATTGCTCTCTAGAGCAGAATGTCTGAATGCT...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGATCTGATATTCTAGTGTaGTATAAAACCAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: KRSPDTIRNGESGALRLRSDILV*YKTSIQ
Trigger: CTGAATGCTGGTTTTATAGCACACTAGAATATCAGA...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGTGTTTTCTAGAGCACTaGCTCACAGGCTATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKCFLEH*LTGYLL
Trigger: CAGAAGATAGCCTGTGAGCCAGTGCTCTAGAAAACA...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTGAAAACAGAGGTGGATaGCGTCTAGCACTAGTAATG +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVENRGG*RLALVM
Trigger: CATTACTAGTGCTAGACGTCATCCACCTCTGTTTTC...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCACAACTAGAAACAACTaGAACTCAGTCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASTTRNN*NSVWYF
Trigger: GAAATACCAGACTGAGTTTCAGTTGTTTCTAGTTGT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAAAATCAAGGCTAACTaGTGTTGGTTTAGACTGTAC +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASKIKAN*CWFRLY
Trigger: GTACAGTCTAAACCAACATCAGTTAGCCTTGATTTT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTTGTTCAAATCTAGATaGTCAAGGGATTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASLFKSR*SRDSRP
Trigger: TGGTCTTGAATCCCTTGAGCATCTAGATTTGAACAA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCTTAAGACTATCAGATTaGTTCTGGGGATTTCCAATG +
Preference number: 4 (lower is better)
Translates to: HSTAYESDSSSAIFKSASLRLSD*FWGFPM
Trigger: CATTGGAAATCCCCAGAAGCAATCTGATAGTCTTAA...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTATCAGCAACTGTTCTaGCTCCAATTCATGTCACAG +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICYQQLF*LQFMSQ
Trigger: CTGTGACATGAATTGGAGCCAGAACAGTTGCTGATA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGTGACAGAAAGCCAATaGCATAAGTGTAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKVTESQ*HKCRSC
Trigger: ACAGGATCTACACTTATGCCATTGGCTTTCTGTCAC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTAGTCGGATGGACAAATaGTTCCAGAAGCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVSRMDK*FQKLST
Trigger: AGTAGAAAGCTTCTGGAACCATTTGTCCATCCGACT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTCTGAGTTGACACAATaGAAAATGACCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GTLILLRGLTYCLIRNICSELTQ*KMTWLF
Trigger: AAAGAGCCAGGTCATTTTCCATTGTGTCAACTCAGA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTTATCAACCAACCATTaGAGTAGCCACTTCAAATGG +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVLSTNH*SSHFKW
Trigger: CCATTTGAAGTGGCTACTTCAATGGTTGGTTGATAA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTGACATCTCAACCATCTaGGTTGACACAATGGAAAAT +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVDISTI*VDTMEN
Trigger: ATTTTCCATTGTGTCAACTCAGATGGTTGAGATGTC...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR TCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTCACAATGGGCAATGTaGAGACAGCTGTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVSQWAM*RQLFLN
Trigger: GTTTAAAAACAGCTGTCTTCACATTGCCCATTGTGA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CCA 90 bp CAAAGAGACATTCCAAGAGTACTCGACCATCTGATGATCAATTTCTCTTTCAAGGCACTTTTAAACAGATaGCAAATGACCAGAAGTATG +
Preference number: 4 (lower is better)
Translates to: QRDIPRVLDHLMINFSFKALLNR*QMTRSM
Trigger: CATACTTCTGGTCATTTGCCATCTGTTTAAAAGTGC...CTTGAAAGAGAAATTGATCATCAGATGGTCGAGTACTCTTGGAATGTCTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp ATTGTGATAGTAGGAAGAGTTCATCATGGGGAATATTaGCCAAGATATAGCACACCTAATAGAACCCAGTTA +
Preference number: 4 (lower is better)
Translates to: IVIVGRVHHGEY*PRYSTPNRTQL
Trigger: TAACTGGGTTCTATTAGGTGTGCTATATCTTGGCAAATATTCCCCATGATGAACTCTTCCTACTATCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
3UTR CAA 72 bp ACTTATAGATTTCTTCAGAAGATTAAACCCAGAATTTaGTGTTTCATGTTCCCAGCTACGAACACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TYRFLQKIKPRI*CFMFPATNTGQ
Trigger: CTGACCTGTGTTCGTAGCTGGGAACATGAAACACAAAATTCTGGGTTTAATCTTCTGAAGAAATCTATAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTTCAGGTATTTAAGCTaGATGCGAGGAAATGAAGAT +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVFRYLS*MRGNED
Trigger: ATCTTCATTTCCTCGCATGCAGCTTAAATACCTGAA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTCTGTATTTTGTGCCATaGAGCTATAGATTCCCATAT +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVLYFVP*SYRFPY
Trigger: ATATGGGAATCTATAGCTGCATGGCACAAAATACAG...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTATCATGGGGAATATTTaGCAAGATATAGCACACCTA +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVIMGNI*QDIAHL
Trigger: TAGGTGTGCTATATCTTGGCAAATATTCCCCATGAT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR GCA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTAGAGGGTTAACATATTaGTTGATCAGAAACATATGC +
Preference number: 4 (lower is better)
Translates to: FQVVLSAACNISLSSKLVRGLTY*LIRNIC
Trigger: GCATATGTTTCTGATCAAGCAATATGTTAACCCTCT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp AGCTCGGTGCGGGCAATTTCCTGCGACTGCAGTCCAGGAGAGGAATaGGGCAGGAGCAGGGCGCGGGGCAGAGACCTGCTCCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: SSVRAISCDCSPGEE*GRSRARGRDLLRRR
Trigger: CCGCCGCCGGAGCAGGTCTCTGCCCCGCGCCCTGCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp GTCCAGGAGAGGAATGCGGCAGGAGCAGGGCGCGGGGCAGAGACCTaGTCCGGCGGCGGGCAACAGGAGGAGAGCGGTCTGGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: VQERNAAGAGRGAET*SGGGQQEESGLGNE
Trigger: TTCATTGCCCAGACCGCTCTCCTCCTGTTGCCCGCCGCCGGAGCAGGTCTCTGCCCCGCGCCCTGCTCCTGCCGCATTCCTCTCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp AGCCCGACAGCGCCCTCCAGCTCGGTGCGGGCAATTTCCTGCGACTaGAGTCCAGGAGAGGAATGCGGCAGGAGCAGGGCGCGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SPTAPSSSVRAISCD*SPGEECGRSRARGR
Trigger: TCTGCCCCGCGCCCTGCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGGCGCTGTCGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp GCAGCAAGCCCGACAGCGCCCTCCAGCTCGGTGCGGGCAATTTCCTaGGACTGCAGTCCAGGAGAGGAATGCGGCAGGAGCAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: AASPTAPSSSVRAIS*DCSPGEECGRSRAR
Trigger: CCGCGCCCTGCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGGCGCTGTCGGGCTTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS TCA 90 bp TCAGCAGAGATGCTCGGTGGCTGCACTGTCTCCCGAAGCCCCGGCTaGAGGCTGTACCATCTAAAGGCATGCAAGGAGCAGACGCAGCGC +
Preference number: 5 (lower is better)
Translates to: SAEMLGGCTVSRSPG*RLYHLKACKEQTQR
Trigger: GCGCTGCGTCTGCTCCTTGCATGCCTTTAGATGGTACAGCCTTCAGCCGGGGCTTCGGGAGACAGTGCAGCCACCGAGCATCTCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CCA 90 bp GCTAGAAAAGGAGGATCGGCGGAGAAGCTCAGCAGAGATGCTCGGTaGCTGCACTGTCTCCCGAAGCCCCGGCTGAAGGCTGTACCATCT +
Preference number: 5 (lower is better)
Translates to: ARKGGSAEKLSRDAR*LHCLPKPRLKAVPS
Trigger: AGATGGTACAGCCTTCAGCCGGGGCTTCGGGAGACAGTGCAGCCACCGAGCATCTCTGCTGAGCTTCTCCGCCGATCCTCCTTTTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCGGCAGGAGGCATAAGTaGCTGATGACTGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: CSGFTQLTAALISRAQVTGRRHK*LMTACL
Trigger: GAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCC...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCGCCACGTTCACACCATaGCACTCCAGCCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAATFTP*HSSLAD
Trigger: GTCAGCCAGGCTGGAGTGCAATGGTGTGAACGTGGC...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTGCAGATGGCTCTCTGTaGGCTGACGGTATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVADGSL*ADGIRL
Trigger: GAGCCTGATACCGTCAGCCAACAGAGAGCCATCTGC...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCTCATCTTTAGTCCAGTaGAGACGAGGGGCAGGACTC +
Preference number: 5 (lower is better)
Translates to: SRCTPGHIPMEASGSTFASSLVQ*RRGAGL
Trigger: GAGTCCTGCCCCTCGTCTCAACTGGACTAAAGATGA...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCAAGAGAAAACCAAGCTaGGACAGCAGTGAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: CSGFTQLTAALISRAQVTKRKPS*DSSEPE
Trigger: CTCTGGCTCACTGCTGTCCAAGCTTGGTTTTCTCTT...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CCA 90 bp AAGTTGCTGATGACTGCCTGCCTCAGAGTTGCTGTAGCCTTCCTGTaGCTCAGACAGCGTTCCTTGGGAAGACAAGTAGCTGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: KLLMTACLRVAVAFL*LRQRSLGRQVAGNV
Trigger: GACATTCCCAGCTACTTGTCTTCCCAAGGAACGCTGTCTGAGCCACAGGAAGGCTACAGCAACTCTGAGGCAGGCAGTCATCAGCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS-3UTR CAA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCCCATACAACCACCCCTaGTTTACTCGTGTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: CSGFTQLTAALISRAQVTPYNHP*FTRVRL
Trigger: CAACCTTACACGAGTAAACAAGGGGTGGTTGTATGG...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCCGGTGCTGCACATTTTaGATGAGCTGTACCCATTTC +
Preference number: 5 (lower is better)
Translates to: CSGFTQLTAALISRAQVTRCCTF*MSCTHF
Trigger: GAAATGGGTACAGCTCATCAAAAATGTGCAGCACCG...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp GTGTATATATCCATTGGCAGGAGGCATAAGTTGCTGATGACTGCCTaGCTCAGAGTTGCTGTAGCCTTCCTGTGGCTCAGACAGCGTTCC +
Preference number: 5 (lower is better)
Translates to: VYISIGRRHKLLMTA*LRVAVAFLWLRQRS
Trigger: GGAACGCTGTCTGAGCCACAGGAAGGCTACAGCAACTCTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCCAATGGATATATACAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 90 bp CCGCTCATCTGTGTGGAGGGAAGTTTCTTCTCACTTATCCTCTCATaGTTGGTGGGAAAGGCAGATGGCTCTCTGTTGGCTGACGGTATC +
Preference number: 5 (lower is better)
Translates to: PLICVEGSFFSLILS*LVGKADGSLLADGI
Trigger: GATACCGTCAGCCAACAGAGAGCCATCTGCCTTTCCCACCAACCATGAGAGGATAAGTGAGAAGAAACTTCCCTCCACACAGATGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS-3UTR CAA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTATGTCTGCAGGCAGATaGAGCTCCTCTGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVMSAGR*SSSVFV
Trigger: CACAAACACAGAGGAGCTCAATCTGCCTGCAGACAT...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACAACGCATGGCCCACCTaGGTGCGGTCAGATGCAATC +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNNAWPT*VRSDAI
Trigger: GATTGCATCTGACCGCACCAAGGTGGGCCATGCGTT...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS TCA 90 bp GTATTCTCGGGTCCTGGAGTAGATGTTGGCATTGTCATAACAATCTaGGCAAATCACCCGGGTACCAGTGCCACCGTCAGTGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: VFSGPGVDVGIVITI*ANHPGTSATVSAFV
Trigger: CACAAAGGCACTGACGGTGGCACTGGTACCCGGGTGATTTGCTCAGATTGTTATGACAATGCCAACATCTACTCCAGGACCCGAGAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 90 bp TCATCTGTGTGGAGGGAAGTTTCTTCTCACTTATCCTCTCATGGTTaGTGGGAAAGGCAGATGGCTCTCTGTTGGCTGACGGTATCAGGC +
Preference number: 5 (lower is better)
Translates to: SSVWREVSSHLSSHG*WERQMALCWLTVSG
Trigger: GCCTGATACCGTCAGCCAACAGAGAGCCATCTGCCTTTCCCACCAACCATGAGAGGATAAGTGAGAAGAAACTTCCCTCCACACAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS-3UTR CAA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCTGGGAAGAGTCACAATaGGGGGATGAAATGACATTT +
Preference number: 5 (lower is better)
Translates to: CSGFTQLTAALISRAQVTWEESQ*GDEMTF
Trigger: AAATGTCATTTCATCCCCCAATTGTGACTCTTCCCA...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCACTCAGACAGCGTTCCTaGGGAAGACAAGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPLRQRS*GRQVAG
Trigger: CCCAGCTACTTGTCTTCCCAAGGAACGCTGTCTGAG...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TGCAGTGGCTTCACACAGCTCACTGCAGCCTTGATTTCCCGGGCTCAAGTGACCTTGTGTATATATCCATaGGCAGGAGGCATAAGTTGC +
Preference number: 5 (lower is better)
Translates to: CSGFTQLTAALISRAQVTLCIYP*AGGISC
Trigger: GCAACTTATGCCTCCTGCCAATGGATATATACACAA...GGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCCACCGTCAGTGCCTTaGTGTATATATCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: TVSRRTTARAERQYSYTGPPSVP*CIYPLA
Trigger: TGCCAATGGATATATACACAAAGGCACTGACGGTGG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCAGCTACTCAGGTGGTaGAGGTGGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNQLLRW*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCACCTGAGTAGCTG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCATCAGGAAGCACATTaGCCCCGTATCTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNHQEAH*PRIFPL
Trigger: CAGAGGGAAGATACGGGGCAAATGTGCTTCCTGATG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCAGAATACAAAAATCTTaGACCTGGTACCAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SRCTPGHIPMEASGSTFARIQKS*TWYQLV
Trigger: GACCAACTGGTACCAGGTCAAAGATTTTTGTATTCT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGACAGTGATAGTGATTaGTATCCTAGCGGCTCACCC +
Preference number: 5 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPDSDSD*YPSGSP
Trigger: GGGTGAGCCGCTAGGATACAAATCACTATCACTGTC...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTCAGCAACATGAGACATaGAGAGAGCAAATAACTGAC +
Preference number: 5 (lower is better)
Translates to: TVSRRTTARAERQYSYTGQQHET*REQITD
Trigger: GTCAGTTATTTGCTCTCTCAATGTCTCATGTTGCTG...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCAGGCAGAAGAAGGGCTaGAACTCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: HSTAYESDSSSAIFKSASRQKKG*NSGGRG
Trigger: ACCTCTGCCTCCCGAGTTCAAGCCCTTCTTCTGCCT...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CCA 90 bp TCTCTGTTGGCTGACGGTATCAGGCTCTCTAGGGCAGTAGTATCCTaGGGAGGATGTACTAAATATGTCTCTTTAGGCATTTGGACCATG +
Preference number: 5 (lower is better)
Translates to: SLLADGIRLSRAVVS*GGCTKYVSLGIWTM
Trigger: CATGGTCCAAATGCCTAAAGAGACATATTTAGTACATCCTCCCCAGGATACTACTGCCCTAGAGAGCCTGATACCGTCAGCCAACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 90 bp GCTTGTGTTCAGAATCCAGCTTCAACAGATGTTTGTCCGGAGCAATaGTTCGTTAGTCTGACTCACCATTGGATCCCCGATCTATCAGTC +
Preference number: 5 (lower is better)
Translates to: ACVQNPASTDVCPEQ*FVSLTHHWIPDLSV
Trigger: GACTGATAGATCGGGGATCCAATGGTGAGTCAGACTAACGAACCATTGCTCCGGACAAACATCTGTTGAAGCTGGATTCTGAACACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS-3UTR CAA 90 bp ACCAGTTGGTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGCTCCATCCTTAAGTTaGCTAATTCCATTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: TSWSSLGFLPKTLNIKAPAPSLS*LIPFRC
Trigger: GCAGCGGAATGGAATTAGCAAACTTAAGGATGGAGC...TGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp ACTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTGCTCCAAAGTTATTTTaGCTCCTTGGAAAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: TVSRRTTARAERQYSYTGAPKLF*LLGKQS
Trigger: ACTTTGCTTTCCAAGGAGCAAAAATAACTTTGGAGC...ACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCATCAGCCTCCAGTTTTaGAAGCGTTCATTATACATA +
Preference number: 5 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAISLQF*KRSLYI
Trigger: TATGTATAATGAACGCTTCAAAAACTGGAGGCTGAT...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCAGATGCACACCAGGGCACATCCCCATGGAAGCATCAGGAAGCACATTTGCCTTTTGGCTTAATCACTaGTATAAAATAAGGACCGGC +
Preference number: 5 (lower is better)
Translates to: SRCTPGHIPMEASGSTFAFWLNH*YKIRTG
Trigger: GCCGGTCCTTATTTTATACAAGTGATTAAGCCAAAA...GGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTTGGAATTTCACCATGTaGGCCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLWNFTM*ARMVSI
Trigger: GATCGAGACCATCCTGGCCAACATGGTGAAATTCCA...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAAGGGGAGCTTGGACATaGGAATGGGTTCCTGCTATT +
Preference number: 5 (lower is better)
Translates to: KRSPDTIRNGESGALRLRRGAWT*EWVPAI
Trigger: AATAGCAGGAACCCATTCCAATGTCCAAGCTCCCCT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp CCAACCATTGAAGTAGCCACTTCAAATGGCAGTCACAGAGCAAACTaGTTGTGTTCAGAATCCATTGGATCCCCGATCTATCAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: PTIEVATSNGSHRAN*LCSESIGSPIYQSG
Trigger: TCCTGACTGATAGATCGGGGATCCAATGGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACTTCAATGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466069.5
CDS GCA 90 bp CCAACCATTGAAGTAGCCACTTCAAATGGCAGTCACAGAGCAAACTaGTTGTGTTCAGAATCCAGCTTCAACAGATGTTTGTCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: PTIEVATSNGSHRAN*LCSESSFNRCLSGA
Trigger: TGCTCCGGACAAACATCTGTTGAAGCTGGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACTTCAATGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS CCA 90 bp CAATATAGGTGTATGGACAGTATTCTCGGGTCCTGGAGTAGATGTTaGCATTGTCATAACAATCTGAGCAAATCACCCGGGTACCAGTGC +
Preference number: 5 (lower is better)
Translates to: QYRCMDSILGSWSRC*HCHNNLSKSPGYQC
Trigger: GCACTGGTACCCGGGTGATTTGCTCAGATTGTTATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACACCTATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 90 bp CGTCCTCCTCAGCAATATAGGTGTATGGACAGTATTCTCGGGTCCTaGAGTAGATGTTGGCATTGTCATAACAATCTGAGCAAATCACCC +
Preference number: 5 (lower is better)
Translates to: RPPQQYRCMDSILGS*SRCWHCHNNLSKSP
Trigger: GGGTGATTTGCTCAGATTGTTATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACACCTATATTGCTGAGGAGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 90 bp GGACAGTGTCTGATCAAGAACGTCCTCCTCAGCAATATAGGTGTATaGACAGTATTCTCGGGTCCTGGAGTAGATGTTGGCATTGTCATA +
Preference number: 5 (lower is better)
Translates to: GQCLIKNVLLSNIGV*TVFSGPGVDVGIVI
Trigger: TATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACACCTATATTGCTGAGGAGGACGTTCTTGATCAGACACTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 90 bp ACAGATGTTTGTCCGGAGCAATGGTTCGTTAGTCTGACTCACCATTaGATCCCCGATCTATCAGTCAGGAGTGAAGACAATGGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: TDVCPEQWFVSLTHH*IPDLSVRSEDNGFK
Trigger: TTTGAAGCCATTGTCTTCACTCCTGACTGATAGATCGGGGATCCAATGGTGAGTCAGACTAACGAACCATTGCTCCGGACAAACATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS-3UTR CAA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTCAGAGCTTCTCCAGCTaGCTGCCAATAACGAACAAA +
Preference number: 5 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLQSFSS*LPITNK
Trigger: TTTGTTCGTTATTGGCAGCAAGCTGGAGAAGCTCTG...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp CACAGTACTGCTTATGAGTCTGACTCAAGTTCTGCAATCTTTAAATCAGCCTCCCTGTTAGGGAAGCATTaGCTGAGAGACCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSTAYESDSSSAIFKSASLLGKH*LRDLLL
Trigger: CAGCAGGAGGTCTCTCAGCAAATGCTTCCCTAACAG...GGAGGCTGATTTAAAGATTGCAGAACTTGAGTCAGACTCATAAGCAGTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp CTGTCAGTAGAAGGACCACTGCTAGAGCAGAGAGGCAGTACTCCTACACGGGTTATGAGTGATAACAATTaGCTAGGCACTATAGGTGAA +
Preference number: 5 (lower is better)
Translates to: LSVEGPLLEQRGSTPTRVMSDNN*LGTIGE
Trigger: TTCACCTATAGTGCCTAGCAAATTGTTATCACTCAT...AACCCGTGTAGGAGTACTGCCTCTCTGCTCTAGCAGTGGTCCTTCTACTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACTTTAAGTTCCAAGAATaGGAGGTGAGGCAGCTTGAA +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNFKFQE*EVRQLE
Trigger: TTCAAGCTGCCTCACCTCCAATTCTTGGAACTTAAA...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACCACAGAGCAAACTGCTaGTGTTCAGAATCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNHRANC*CSESVL
Trigger: AAGAACTGATTCTGAACACAAGCAGTTTGCTCTGTG...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTACCTCCTGCTGTATTTaGTGCCATGCAGCTATAGAT +
Preference number: 5 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLTSCCI*CHAAID
Trigger: ATCTATAGCTGCATGGCACAAAATACAGCAGGAGGT...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AGCTGTTGCCATTTCTTCATCAGGTATAAGACCAAACAACGCATGGCCCACCTTTCAAGCCTGGGATTCTaGCCAAAGACCTTGAATATC +
Preference number: 5 (lower is better)
Translates to: SCCHFFIRYKTKQRMAHLSSLGF*PKTLNI
Trigger: GATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGA...AAGGTGGGCCATGCGTTGTTTGGTCTTATACCTGATGAAGAAATGGCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAACCCGATCTAACTCATaGGTTCCTGAAGGAATGACT +
Preference number: 5 (lower is better)
Translates to: KRSPDTIRNGESGALRLRTRSNS*VPEGMT
Trigger: AGTCATTCCTTCAGGAACCAATGAGTTAGATCGGGT...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACTCTCAACCATCTGAGTaGACACAATGGAAAATGACC +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNSQPSE*TQWKMT
Trigger: GGTCATTTTCCATTGTGTCAACTCAGATGGTTGAGA...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GTCAAGCCTGGGATTCTTGCCAAAGACCTTGAATATCAAAGCCCCAGTCTCAACTTTCAGGAGAGTAGCTaGTATACGAGGGAAAGTACT +
Preference number: 5 (lower is better)
Translates to: VKPGILAKDLEYQSPSLNFQESS*YTREST
Trigger: AGTACTTTCCCTCGTATACAAGCTACTCTCCTGAAA...GTTGAGACTGGGGCTTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp TACAAACCACAGACAAAATCTTTCAGATCCACATTCAGGATGCTTTaGCCTGCTAGCCATTCAGGGTGTGCACAGCTTACATTCACAGAA +
Preference number: 5 (lower is better)
Translates to: YKPQTKSFRSTFRML*PASHSGCAQLTFTE
Trigger: TTCTGTGAATGTAAGCTGTGCACACCCTGAATGGCTAGCAGGGCAAAGCATCCTGAATGTGGATCTGAAAGATTTTGTCTGTGGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466069.5
CDS CCA 90 bp TTCAAATGGCAGTCACAGAGCAAACTGCTTGTGTTCAGAATCCATTaGATCCCCGATCTATCAGTCAGGAGTGAAGACAATGGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FKWQSQSKLLVFRIH*IPDLSVRSEDNGFK
Trigger: TTTGAAGCCATTGTCTTCACTCCTGACTGATAGATCGGGGATCCAATGGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466069.5
CDS-3UTR CAA 90 bp AGGCACAAGTCAAGCTGTTTCTTCACCTTCACCCTATTCCATCTTCACACACACACTCGTGTAAGGTTGTaGTGTTCCAGTTCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: RHKSSCFFTFTLFHLHTHTRVRL*CSSSSS
Trigger: AGAACTAGAACTGGAACACAACAACCTTACACGAGT...GTGTGTGTGAAGATGGAATAGGGTGAAGGTGAAGAAACAGCTTGACTTGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGACATCATGGGGAATATTaGCCAAGATATAGCACACCT +
Preference number: 5 (lower is better)
Translates to: KRSPDTIRNGESGALRLRHHGEY*PRYSTP
Trigger: AGGTGTGCTATATCTTGGCAAATATTCCCCATGATG...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 90 bp AAATCATCACAGACAAAATCTTTCAGATCCACATTCAGGATGCTTTaGCCTGCTAGCCATTCAGGGTGTGCACAGCTTACATTCACAGAA +
Preference number: 5 (lower is better)
Translates to: KSSQTKSFRSTFRML*PASHSGCAQLTFTE
Trigger: TTCTGTGAATGTAAGCTGTGCACACCCTGAATGGCTAGCAGGGCAAAGCATCCTGAATGTGGATCTGAAAGATTTTGTCTGTGATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGATTTACTCGTGTAAGGTaGTTGTGTTCCAGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: KRSPDTIRNGESGALRLRFTRVR*LCSSSS
Trigger: ACTAGAACTGGAACACAACAACCTTACACGAGTAAA...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp GGGACACTAATCCTACTTAGAGGGTTAACATATTGCTTGATCAGAAACATATGCTTGACCTGGTACCAGTaGGTCAAGCCTGGGATTCTT +
Preference number: 5 (lower is better)
Translates to: GTLILLRGLTYCLIRNICLTWYQ*VKPGIL
Trigger: AAGAATCCCAGGCTTGACCAACTGGTACCAGGTCAA...GCATATGTTTCTGATCAAGCAATATGTTAACCCTCTAAGTAGGATTAGTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGAGTGAGTTTGGAACCCTaGAACCAGGACTTAAAAATA +
Preference number: 5 (lower is better)
Translates to: KRSPDTIRNGESGALRLRVSLEP*NQDLKI
Trigger: TATTTTTAAGTCCTGGTTCAAGGGTTCCAAACTCAC...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTGTCTCTTTAGGCATTaGGACCATGAGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: FQVVLSAACNISLSSKLVCLFRH*DHEAGQ
Trigger: CTGTCCAGCCTCATGGTCCAAATGCCTAAAGAGACA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTAAGTGGGGAGATTGCTaGAGCCCAGGAGTTTGTGAT +
Preference number: 5 (lower is better)
Translates to: FQVVLSAACNISLSSKLVKWGDC*SPGVCD
Trigger: ATCACAAACTCCTGGGCTCAAGCAATCTCCCCACTT...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp AAACGTTCTCCAGACACAATCAGAAATGGTGAATCTGGGGCACTGAGACTGAGATTTAAGACTATCAGATaGCTTCTGGGGATTTCCAAT +
Preference number: 5 (lower is better)
Translates to: KRSPDTIRNGESGALRLRFKTIR*LLGISN
Trigger: ATTGGAAATCCCCAGAAGCAATCTGATAGTCTTAAA...TCTCAGTCTCAGTGCCCCAGATTCACCATTTCTGATTGTGTCTGGAGAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTTACAGTATAAGAATTTaGGGGCCAGGCAAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: FQVVLSAACNISLSSKLVYSIRI*GPGKWL
Trigger: GAGCCACTTGCCTGGCCCCAAAATTCTTATACTGTA...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS-3UTR CAA 90 bp TTTCAGGTGGTGTTAAGTGCAGCTTGTAACATATCTCTTAGTTCCAAACTTGTTCAGGTCAGACCGCTTTaGTCAACCAAAGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: FQVVLSAACNISLSSKLVQVRPL*STKVQN
Trigger: ATTTTGGACTTTGGTTGACAAAAGCGGTCTGACCTG...AACAAGTTTGGAACTAAGAGATATGTTACAAGCTGCACTTAACACCACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 72 bp AGGAATGCGGCAGGAGCAGGGCGCGGGGCAGAGACCTaGTCCGGCGGCGGGCAACAGGAGGAGAGCGGTCTG +
Preference number: 6 (lower is better)
Translates to: RNAAGAGRGAET*SGGGQQEESGL
Trigger: CAGACCGCTCTCCTCCTGTTGCCCGCCGCCGGAGCAGGTCTCTGCCCCGCGCCCTGCTCCTGCCGCATTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 72 bp GCGCCCTCCAGCTCGGTGCGGGCAATTTCCTGCGACTaGAGTCCAGGAGAGGAATGCGGCAGGAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: APSSSVRAISCD*SPGEECGRSRA
Trigger: CGCCCTGCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 72 bp CGGGCAATTTCCTGCGACTGCAGTCCAGGAGAGGAATaGGGCAGGAGCAGGGCGCGGGGCAGAGACCTGCTC +
Preference number: 6 (lower is better)
Translates to: RAISCDCSPGEE*GRSRARGRDLL
Trigger: GAGCAGGTCTCTGCCCCGCGCCCTGCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 72 bp CCGACAGCGCCCTCCAGCTCGGTGCGGGCAATTTCCTaGGACTGCAGTCCAGGAGAGGAATGCGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: PTAPSSSVRAIS*DCSPGEECGRS
Trigger: GCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGGAAATTGCCCGCACCGAGCTGGAGGGCGCTGTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 72 bp AACCGAGAAAGCACTCTAGATCGACACCCCAGCAACTaGTCCTCCGGGACGCCTAGGGGCGCCGGCGCCATT +
Preference number: 6 (lower is better)
Translates to: NRESTLDRHPSN*SSGTPRGAGAI
Trigger: AATGGCGCCGGCGCCCCTAGGCGTCCCGGAGGAGCAGTTGCTGGGGTGTCGATCTAGAGTGCTTTCTCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS TCA 72 bp ATGCTCGGTGGCTGCACTGTCTCCCGAAGCCCCGGCTaGAGGCTGTACCATCTAAAGGCATGCAAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: MLGGCTVSRSPG*RLYHLKACKEQ
Trigger: CTGCTCCTTGCATGCCTTTAGATGGTACAGCCTTCAGCCGGGGCTTCGGGAGACAGTGCAGCCACCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CCA 72 bp CCACGGCAATGTGATGTTGCAGCTGGGGAGAGAGACTaGGTTCGACTCAGTGAGGGAGAGACAGTAGGGAAA +
Preference number: 6 (lower is better)
Translates to: PRQCDVAAGERD*VRLSEGETVGK
Trigger: TTTCCCTACTGTCTCTCCCTCACTGAGTCGAACCCAGTCTCTCTCCCCAGCTGCAACATCACATTGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS CAA 72 bp TCTGTCACCAGCAAAGGCCCATCATCTTTAGTCCAGTaGAGACGAGGGGCAGGACTCCCTCCAGCTATGCAC +
Preference number: 6 (lower is better)
Translates to: SVTSKGPSSLVQ*RRGAGLPPAMH
Trigger: GTGCATAGCTGGAGGGAGTCCTGCCCCTCGTCTCAACTGGACTAAAGATGATGGGCCTTTGCTGGTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS GCA 72 bp CTTTGCGCCACACAGTGGACATGGGTGAATCACTGCTaGTCACTGCAGTGCACGTCAGAGTCACATTCATGC +
Preference number: 6 (lower is better)
Translates to: LCATQWTWVNHC*SLQCTSESHSC
Trigger: GCATGAATGTGACTCTGACGTGCACTGCAGTGAGCAGCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS GCA 72 bp TCCATTGGCAGGAGGCATAAGTTGCTGATGACTGCCTaGCTCAGAGTTGCTGTAGCCTTCCTGTGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: SIGRRHKLLMTA*LRVAVAFLWLR
Trigger: TCTGAGCCACAGGAAGGCTACAGCAACTCTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCCAATGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 72 bp ATGACTGCCTGCCTCAGAGTTGCTGTAGCCTTCCTGTaGCTCAGACAGCGTTCCTTGGGAAGACAAGTAGCT +
Preference number: 6 (lower is better)
Translates to: MTACLRVAVAFL*LRQRSLGRQVA
Trigger: AGCTACTTGTCTTCCCAAGGAACGCTGTCTGAGCCACAGGAAGGCTACAGCAACTCTGAGGCAGGCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 72 bp CTCTCATGGTTGGTGGGAAAGGCAGATGGCTCTCTGTaGGCTGACGGTATCAGGCTCTCTAGGGCAGTAGTA +
Preference number: 6 (lower is better)
Translates to: LSWLVGKADGSL*ADGIRLSRAVV
Trigger: TACTACTGCCCTAGAGAGCCTGATACCGTCAGCCAACAGAGAGCCATCTGCCTTTCCCACCAACCATGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 90 bp TCACTTATCCTCTCATGGTTGGTGGGAAAGGCAGATGGCTCTCTGTaGGCTGACGGTATCAGGCTCTCTAGGGCAGTAGTATCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: SLILSWLVGKADGSL*ADGIRLSRAVVSWG
Trigger: TCCCCAGGATACTACTGCCCTAGAGAGCCTGATACCGTCAGCCAACAGAGAGCCATCTGCCTTTCCCACCAACCATGAGAGGATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS TCA 72 bp GGTGACTCATGGACTGGCTGCTGGGAAAAAGGAGGATaGGGCAGGCCTAGTTCTCTGTTTATGTTCCACACG +
Preference number: 6 (lower is better)
Translates to: GDSWTGCWEKGG*GRPSSLFMFHT
Trigger: CGTGTGGAACATAAACAGAGAACTAGGCCTGCCTCATCCTCCTTTTTCCCAGCAGCCAGTCCATGAGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS GCA 72 bp TGTCTTTGCGCCACACAGTGGACATGGGTGAATCACTaGTGCTCACTGCAGTGCACGTCAGAGTCACATTCA +
Preference number: 6 (lower is better)
Translates to: CLCATQWTWVNH*CSLQCTSESHS
Trigger: TGAATGTGACTCTGACGTGCACTGCAGTGAGCAGCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 90 bp AAATGTCGTTCTGTCACCAGCAAAGGCCCATCATCTTTAGTCCAGTaGAGACGAGGGGCAGGACTCCCTCCAGCTATGCACTGTAACACC +
Preference number: 6 (lower is better)
Translates to: KCRSVTSKGPSSLVQ*RRGAGLPPAMHCNT
Trigger: GGTGTTACAGTGCATAGCTGGAGGGAGTCCTGCCCCTCGTCTCAACTGGACTAAAGATGATGGGCCTTTGCTGGTGACAGAACGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 90 bp ACCGTCAGTGCCTTTGTGTATATATCCATTGGCAGGAGGCATAAGTaGCTGATGACTGCCTGCCTCAGAGTTGCTGTAGCCTTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: TVSAFVYISIGRRHK*LMTACLRVAVAFLW
Trigger: CCACAGGAAGGCTACAGCAACTCTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCCAATGGATATATACACAAAGGCACTGACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS TCA 72 bp GGTCCTGGAGTAGATGTTGGCATTGTCATAACAATCTaGGCAAATCACCCGGGTACCAGTGCCACCGTCAGT +
Preference number: 6 (lower is better)
Translates to: GPGVDVGIVITI*ANHPGTSATVS
Trigger: ACTGACGGTGGCACTGGTACCCGGGTGATTTGCTCAGATTGTTATGACAATGCCAACATCTACTCCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 72 bp ACACGGGCCGCTGCAATGTTTCACCGCTCATCTGTGTaGAGGGAAGTTTCTTCTCACTTATCCTCTCATGGT +
Preference number: 6 (lower is better)
Translates to: TRAAAMFHRSSV*REVSSHLSSHG
Trigger: ACCATGAGAGGATAAGTGAGAAGAAACTTCCCTCCACACAGATGAGCGGTGAAACATTGCAGCGGCCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS TCA 72 bp AACCCTAACAGGATTCTTGCTGAAGACAGGCCAGGGTaGTCAGACATCACCTGGGAATGGTCTACAATGAGG +
Preference number: 6 (lower is better)
Translates to: NPNRILAEDRPG*SDITWEWSTMR
Trigger: CCTCATTGTAGACCATTCCCAGGTGATGTCTGATCACCCTGGCCTGTCTTCAGCAAGAATCCTGTTAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS GCA 72 bp ATGACAATGCCAACTGTGGTCCAGCCATCATCTTCATaGCCAATGCTACTCTGGGAAGAGTCACAATTGGGG +
Preference number: 6 (lower is better)
Translates to: MTMPTVVQPSSS*PMLLWEESQLG
Trigger: CCCCAATTGTGACTCTTCCCAGAGTAGCATTGGGCATGAAGATGATGGCTGGACCACAGTTGGCATTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS GCA 72 bp CAGCGTTCCTTGGGAAGACAAGTAGCTGGGAATGTCTaGAGGCAGATTGAGCTCCTCTGTGTTTGTGATACT +
Preference number: 6 (lower is better)
Translates to: QRSLGRQVAGNV*RQIELLCVCDT
Trigger: AGTATCACAAACACAGAGGAGCTCAATCTGCCTGCAGACATTCCCAGCTACTTGTCTTCCCAAGGAACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 72 bp GCCTTTGTGTATATATCCATTGGCAGGAGGCATAAGTaGCTGATGACTGCCTGCCTCAGAGTTGCTGTAGCC +
Preference number: 6 (lower is better)
Translates to: AFVYISIGRRHK*LMTACLRVAVA
Trigger: GGCTACAGCAACTCTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCTGCCAATGGATATATACACAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS TCA 72 bp GCATCTTCTAGCCCGGCATCTACAATGATGAGAAGCTaGTTGGCTGCAGCAAAGAAATGTCGTTCTGTCACC +
Preference number: 6 (lower is better)
Translates to: ASSSPASTMMRS*LAAAKKCRSVT
Trigger: GGTGACAGAACGACATTTCTTTGCTGCAGCCAATCAGCTTCTCATCATTGTAGATGCCGGGCTAGAAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 72 bp CTGATCAAGAACGTCCTCCTCAGCAATATAGGTGTATaGACAGTATTCTCGGGTCCTGGAGTAGATGTTGGC +
Preference number: 6 (lower is better)
Translates to: LIKNVLLSNIGV*TVFSGPGVDVG
Trigger: GCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACACCTATATTGCTGAGGAGGACGTTCTTGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 72 bp TGTCCGGAGCAATGGTTCGTTAGTCTGACTCACCATTaGATCCCCGATCTATCAGTCAGGAGTGAAGACAAT +
Preference number: 6 (lower is better)
Translates to: CPEQWFVSLTHH*IPDLSVRSEDN
Trigger: ATTGTCTTCACTCCTGACTGATAGATCGGGGATCCAATGGTGAGTCAGACTAACGAACCATTGCTCCGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS CCA 72 bp CAGAATCCAGCTTCAACAGATGTTTGTCCGGAGCAATaGTTCGTTAGTCTGACTCACCATTGGATCCCCGAT +
Preference number: 6 (lower is better)
Translates to: QNPASTDVCPEQ*FVSLTHHWIPD
Trigger: ATCGGGGATCCAATGGTGAGTCAGACTAACGAACCATTGCTCCGGACAAACATCTGTTGAAGCTGGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS CAA 72 bp TTCTCAGTATCCACGTCATACAGGATTTCACTGTCTTaGCGCCACACAGTGGACATGGGTGAATCACTGCTG +
Preference number: 6 (lower is better)
Translates to: FSVSTSYRISLS*RHTVDMGESLL
Trigger: CAGCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAGACAGTGAAATCCTGTATGACGTGGATACTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 90 bp CGAACAAAATTCTCAGTATCCACGTCATACAGGATTTCACTGTCTTaGCGCCACACAGTGGACATGGGTGAATCACTGCTGCTCACTGCA +
Preference number: 6 (lower is better)
Translates to: RTKFSVSTSYRISLS*RHTVDMGESLLLTA
Trigger: TGCAGTGAGCAGCAGTGATTCACCCATGTCCACTGTGTGGCGCAAAGACAGTGAAATCCTGTATGACGTGGATACTGAGAATTTTGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 90 bp ACCATTGAAGTAGCCACTTCAAATGGCAGTCACAGAGCAAACTGCTaGTGTTCAGAATCCATTGGATCCCCGATCTATCAGTCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: TIEVATSNGSHRANC*CSESIGSPIYQSGV
Trigger: CACTCCTGACTGATAGATCGGGGATCCAATGGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACTTCAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466069.5
CDS CCA 72 bp GTGGTCCAGCCATCATCTTCATGCCCAATGCTACTCTaGGAAGAGTCACAATTGGGGGATGAAATGACATTT +
Preference number: 6 (lower is better)
Translates to: VVQPSSSCPMLL*EESQLGDEMTF
Trigger: AAATGTCATTTCATCCCCCAATTGTGACTCTTCCCAGAGTAGCATTGGGCATGAAGATGATGGCTGGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 72 bp TGTATGGACAGTATTCTCGGGTCCTGGAGTAGATGTTaGCATTGTCATAACAATCTGAGCAAATCACCCGGG +
Preference number: 6 (lower is better)
Translates to: CMDSILGSWSRC*HCHNNLSKSPG
Trigger: CCCGGGTGATTTGCTCAGATTGTTATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CCA 72 bp GCTGACGGTATCAGGCTCTCTAGGGCAGTAGTATCCTaGGGAGGATGTACTAAATATGTCTCTTTAGGCATT +
Preference number: 6 (lower is better)
Translates to: ADGIRLSRAVVS*GGCTKYVSLGI
Trigger: AATGCCTAAAGAGACATATTTAGTACATCCTCCCCAGGATACTACTGCCCTAGAGAGCCTGATACCGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 90 bp ACCATTGAAGTAGCCACTTCAAATGGCAGTCACAGAGCAAACTGCTaGTGTTCAGAATCCAGCTTCAACAGATGTTTGTCCGGAGCAATG +
Preference number: 6 (lower is better)
Translates to: TIEVATSNGSHRANC*CSESSFNRCLSGAM
Trigger: CATTGCTCCGGACAAACATCTGTTGAAGCTGGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACTTCAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS GCA 72 bp GAAGTAGCCACTTCAAATGGCAGTCACAGAGCAAACTaGTTGTGTTCAGAATCCATTGGATCCCCGATCTAT +
Preference number: 6 (lower is better)
Translates to: EVATSNGSHRAN*LCSESIGSPIY
Trigger: ATAGATCGGGGATCCAATGGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466069.5
CDS CCA 72 bp CAGTCACAGAGCAAACTGCTTGTGTTCAGAATCCATTaGATCCCCGATCTATCAGTCAGGAGTGAAGACAAT +
Preference number: 6 (lower is better)
Translates to: QSQSKLLVFRIH*IPDLSVRSEDN
Trigger: ATTGTCTTCACTCCTGACTGATAGATCGGGGATCCAATGGATTCTGAACACAAGCAGTTTGCTCTGTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466069.5
CDS CAA 72 bp AGCTGCTGTAACATTCGCAAGCCATACAACCACCCCTaGTTTACTCGTGTAAGGTTGTTGTGTTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: SCCNIRKPYNHP*FTRVRLLCSSS
Trigger: AGAACTGGAACACAACAACCTTACACGAGTAAACAAGGGGTGGTTGTATGGCTTGCGAATGTTACAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CCA 72 bp CAGCAATATAGGTGTATGGACAGTATTCTCGGGTCCTaGAGTAGATGTTGGCATTGTCATAACAATCTGAGC +
Preference number: 6 (lower is better)
Translates to: QQYRCMDSILGS*SRCWHCHNNLS
Trigger: GCTCAGATTGTTATGACAATGCCAACATCTACTCCAGGACCCGAGAATACTGTCCATACACCTATATTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 72 bp CCATACAACCACCCCTTGTTTACTCGTGTAAGGTTGTaGTGTTCCAGTTCTAGTTCTTCCATGTTATTCAAG +
Preference number: 6 (lower is better)
Translates to: PYNHPLFTRVRL*CSSSSSSMLFK
Trigger: CTTGAATAACATGGAAGAACTAGAACTGGAACACAACAACCTTACACGAGTAAACAAGGGGTGGTTGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CAA 72 bp AAGCCATACAACCACCCCTTGTTTACTCGTGTAAGGTaGTTGTGTTCCAGTTCTAGTTCTTCCATGTTATTC +
Preference number: 6 (lower is better)
Translates to: KPYNHPLFTRVR*LCSSSSSSMLF
Trigger: GAATAACATGGAAGAACTAGAACTGGAACACAACAACCTTACACGAGTAAACAAGGGGTGGTTGTATGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS GCA 72 bp GAAGTAGCCACTTCAAATGGCAGTCACAGAGCAAACTaGTTGTGTTCAGAATCAGTTCTTTTAAATGAGTCT +
Preference number: 6 (lower is better)
Translates to: EVATSNGSHRAN*LCSESVLLNES
Trigger: AGACTCATTTAAAAGAACTGATTCTGAACACAAGCAGTTTGCTCTGTGACTGCCATTTGAAGTGGCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361127.6
ENST00000492207.5
CDS GCA 72 bp CATTTGCTGAGAGACCTCCTGCTGTATTTTGTGCCATaGAGCTATAGATTCCCATATCTTCTATTTTCACAT +
Preference number: 6 (lower is better)
Translates to: HLLRDLLLYFVP*SYRFPYLLFSH
Trigger: ATGTGAAAATAGAAGATATGGGAATCTATAGCTGCATGGCACAAAATACAGCAGGAGGTCTCTCAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361127.6
ENST00000466161.1
ENST00000492207.5
CDS CAA 72 bp TTCGGTTACGGTTTAACTTTACCACTAATAAGGAACTaGATAAATTATCGAAGCAACCAGCCTCCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: FGYGLTLPLIRN*INYRSNQPPRW
Trigger: CCACCTTGGAGGCTGGTTGCTTCGATAATTTATCAAGTTCCTTATTAGTGGTAAAGTTAAACCGTAACCGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CAA 72 bp CATCACCTGGGAATGGTCTACAATGAGGAAGAGTTCTaGCTAAACTGGTTTTACAGGGTTTGTGCTAAAATT +
Preference number: 6 (lower is better)
Translates to: HHLGMVYNEEEF*LNWFYRVCAKI
Trigger: AATTTTAGCACAAACCCTGTAAAACCAGTTTAGCAAGAACTCTTCCTCATTGTAGACCATTCCCAGGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466161.1
CDS CAA 90 bp TCATGCTCATTCGGTTACGGTTTAACTTTACCACTAATAAGGAACTaGATAAATTATCGAAGCAACCAGCCTCCAAGGTGGTTATTCTGT +
Preference number: 6 (lower is better)
Translates to: SCSFGYGLTLPLIRN*INYRSNQPPRWLFC
Trigger: ACAGAATAACCACCTTGGAGGCTGGTTGCTTCGATAATTTATCAAGTTCCTTATTAGTGGTAAAGTTAAACCGTAACCGAATGAGCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CAA 90 bp CTTAAATTCAGGTATTTAAGCTGCATGCGAGGAAATGAAGATGTCTaGATTTCTGATATTATATTTGAGCTGAGGTCTAAACTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LKFRYLSCMRGNEDV*ISDIIFELRSKLSR
Trigger: TCTGGAGAGTTTAGACCTCAGCTCAAATATAATATCAGAAATCAAGACATCTTCATTTCCTCGCATGCAGCTTAAATACCTGAATTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6
CDS CAA 72 bp AGGTATTTAAGCTGCATGCGAGGAAATGAAGATGTCTaGATTTCTGATATTATATTTGAGCTGAGGTCTAAA +
Preference number: 6 (lower is better)
Translates to: RYLSCMRGNEDV*ISDIIFELRSK
Trigger: TTTAGACCTCAGCTCAAATATAATATCAGAAATCAAGACATCTTCATTTCCTCGCATGCAGCTTAAATACCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361127.6