Pregenerated sensors for LRIF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000121931Ensembl transcript IDs: ENST00000369763.5, ENST00000485275.2, ENST00000494675.5
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GGCTTCGGGACGAGGTCGCGCACCGCGCAGAAACCGGAAGGCTCCTaGCGGTGGACTGCGCCCTCACAGCCCTACGCTGAGAGAGAATCG | + |
Preference number: 5 (lower is better) Translates to: GFGTRSRTAQKPEGS*RWTAPSQPYAERES Trigger: CGATTCTCTCTCAGCGTAGGGCTGTGAGGGCGCAGTCCACCGCCAGGAGCCTTCCGGTTTCTGCGCGGTGCGCGACCTCGTCCCGAAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485275.2 |
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CDS CCA 90 bp | ACACCTCATCCAGAAAAGTGGGAAGCGTGGGGCCGAGTTTCCCAATaGGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGGAGTTGCCCA | + |
Preference number: 5 (lower is better) Translates to: TPHPEKWEAWGRVSQ*GENQSEGMLGWSCP Trigger: TGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAAACTCGGCCCCACGCTTCCCACTTTTCTGGATGAGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369763.5 ENST00000485275.2 |
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CDS TCA 90 bp | GACGCTGGTACAGATTTCACTTCAGCATGGGCTGGAATCTGTAAATaGTGCCCAGAAGGCAAAACTGGAGACTTCACAGTCACTGGAAGA | + |
Preference number: 5 (lower is better) Translates to: DAGTDFTSAWAGICK*CPEGKTGDFTVTGR Trigger: TCTTCCAGTGACTGTGAAGTCTCCAGTTTTGCCTTCTGGGCATCATTTACAGATTCCAGCCCATGCTGAAGTGAAATCTGTACCAGCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS GCA 90 bp | ACCATTCCTGAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTGCTaGACTGAAGGAGGCAATGATGACGCTGGTACAGATTTCACTTCA | + |
Preference number: 5 (lower is better) Translates to: TIPEVLVVAVASIFC*TEGGNDDAGTDFTS Trigger: TGAAGTGAAATCTGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS GCA 90 bp | TCAACCATTCCTGAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTaGTGCACTGAAGGAGGCAATGATGACGCTGGTACAGATTTCACT | + |
Preference number: 5 (lower is better) Translates to: STIPEVLVVAVASIF*CTEGGNDDAGTDFT Trigger: AGTGAAATCTGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 90 bp | GAGATGGTTTCTCCACTTTATTCTTCTCTGCCCTTAGATTGGCCATaGAAGCAAGCTGGGTATTGGAAAGTGATTTTGTCTCCATCTGGG | + |
Preference number: 5 (lower is better) Translates to: EMVSPLYSSLPLDWP*KQAGYWKVILSPSG Trigger: CCCAGATGGAGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGAGAAACCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 90 bp | TCCACTTTATTCTTCTCTGCCCTTAGATTGGCCATGGAAGCAAGCTaGGTATTGGAAAGTGATTTTGTCTCCATCTGGGAAGATTTACTT | + |
Preference number: 5 (lower is better) Translates to: STLFFSALRLAMEAS*VLESDFVSIWEDLL Trigger: AAGTAAATCTTCCCAGATGGAGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 90 bp | TTTACCAAACTGCTAAAGGAATCGAAACCTTCTCCAGAGGTCAAATaGTCAGGAATTCGAGTAAGGCACACTCTCAAATCCTTAGTAAGG | + |
Preference number: 5 (lower is better) Translates to: FTKLLKESKPSPEVK*SGIRVRHTLKSLVR Trigger: CCTTACTAAGGATTTGAGAGTGTGCCTTACTCGAATTCCTGACCATTTGACCTCTGGAGAAGGTTTCGATTCCTTTAGCAGTTTGGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369763.5 ENST00000485275.2 ENST00000494675.5 |
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CDS TCA 90 bp | TCTTACTGGAGTATCAGGAGAAACAGAATTCTGTTGGTCAATTTGTaGTGGCAGAACATCTGTCCCCTTTTTAGCCAACAGATAGACTTT | + |
Preference number: 5 (lower is better) Translates to: SYWSIRRNRILLVNL*WQNICPLFSQQIDF Trigger: AAAGTCTATCTGTTGGCTAAAAAGGGGACAGATGTTCTGCCATCACAAATTGACCAACAGAATTCTGTTTCTCCTGATACTCCAGTAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS TCA 90 bp | GGTTTTCCTGTATTCCCTTTCAAAGCATCAGACATGACTGAAGATTaGACTAGTGGTATAAGATTTCCAGAAGACTTAGGAATTGGAAGT | + |
Preference number: 5 (lower is better) Translates to: GFPVFPFKASDMTED*TSGIRFPEDLGIGS Trigger: ACTTCCAATTCCTAAGTCTTCTGGAAATCTTATACCACTAGTTCAATCTTCAGTCATGTCTGATGCTTTGAAAGGGAATACAGGAAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369763.5 ENST00000494675.5 |
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CDS TCA 90 bp | CTCATTATGGATCTTTGGTTCTTGGTCTCTGAAAACACACTGTTGTaGAGTAACAGTTGTTGCATCAACAGAGGAACTTATTTTCTCTAT | + |
Preference number: 5 (lower is better) Translates to: LIMDLWFLVSENTLL*SNSCCINRGTYFLY Trigger: ATAGAGAAAATAAGTTCCTCTGTTGATGCAACAACTGTTACTTCACAACAGTGTGTTTTCAGAGACCAAGAACCAAAGATCCATAATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 72 bp | ACGAGGTCGCGCACCGCGCAGAAACCGGAAGGCTCCTaGCGGTGGACTGCGCCCTCACAGCCCTACGCTGAG | + |
Preference number: 6 (lower is better) Translates to: TRSRTAQKPEGS*RWTAPSQPYAE Trigger: CTCAGCGTAGGGCTGTGAGGGCGCAGTCCACCGCCAGGAGCCTTCCGGTTTCTGCGCGGTGCGCGACCTCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485275.2 |
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CDS CCA 72 bp | CCAGAAAAGTGGGAAGCGTGGGGCCGAGTTTCCCAATaGGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGG | + |
Preference number: 6 (lower is better) Translates to: PEKWEAWGRVSQ*GENQSEGMLGW Trigger: CCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAAACTCGGCCCCACGCTTCCCACTTTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369763.5 ENST00000485275.2 |
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CDS CAA 90 bp | TTCCCAATGGGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGGAGTaGCCCACAGCAACTGTGAGGGGTTCGACCTTAACGGAGGGCGAC | + |
Preference number: 6 (lower is better) Translates to: FPMGREPERGNVGLE*PTATVRGSTLTEGD Trigger: GTCGCCCTCCGTTAAGGTCGAACCCCTCACAGTTGCTGTGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369763.5 ENST00000485275.2 |
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CDS CAA 72 bp | GGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGGAGTaGCCCACAGCAACTGTGAGGGGTTCGACCTTAACG | + |
Preference number: 6 (lower is better) Translates to: GREPERGNVGLE*PTATVRGSTLT Trigger: CGTTAAGGTCGAACCCCTCACAGTTGCTGTGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369763.5 ENST00000485275.2 |
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CDS CCA 72 bp | TTTCCCAATGGGGCGAGAACCAGAGCGAGGGAATGTTaGGCTGGAGTTGCCCACAGCAACTGTGAGGGGTTC | + |
Preference number: 6 (lower is better) Translates to: FPNGARTRAREC*AGVAHSNCEGF Trigger: GAACCCCTCACAGTTGCTGTGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369763.5 ENST00000485275.2 |
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CDS GCA 72 bp | CTTGGTACATGCAGCCTGAAACACAACGCGAGGCGTTaGCTGAATTTTCCTCTGCGGGTTTCAGGAAGACCC | + |
Preference number: 6 (lower is better) Translates to: LGTCSLKHNARR*LNFPLRVSGRP Trigger: GGGTCTTCCTGAAACCCGCAGAGGAAAATTCAGGCAACGCCTCGCGTTGTGTTTCAGGCTGCATGTACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS GCA 72 bp | TTCCATCCGAGCCAATCGTCTGAACTACTTGGTACATaGAGCCTGAAACACAACGCGAGGCGTTGCCTGAAT | + |
Preference number: 6 (lower is better) Translates to: FHPSQSSELLGT*SLKHNARRCLN Trigger: ATTCAGGCAACGCCTCGCGTTGTGTTTCAGGCTGCATGTACCAAGTAGTTCAGACGATTGGCTCGGATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS GCA 72 bp | CCTGAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTaGTGCACTGAAGGAGGCAATGATGACGCTGGTACA | + |
Preference number: 6 (lower is better) Translates to: PEVLVVAVASIF*CTEGGNDDAGT Trigger: TGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS GCA 72 bp | GTTGATGCCATCTCATTATGGATCAACGCGAGGCGTTaGCTGAATTTTCCTCTGCGGGTTTCAGGAAGACCC | + |
Preference number: 6 (lower is better) Translates to: VDAISLWINARR*LNFPLRVSGRP Trigger: GGGTCTTCCTGAAACCCGCAGAGGAAAATTCAGGCAACGCCTCGCGTTGATCCATAATGAGATGGCATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485275.2 |
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CDS CCA 72 bp | TTTGGGAGGCCTCAACCATTCCTGAGGTACTGGTGGTaGCAGTTGCAAGTATCTTTTGCTGCACTGAAGGAG | + |
Preference number: 6 (lower is better) Translates to: FGRPQPFLRYWW*QLQVSFAALKE Trigger: CTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGTTGAGGCCTCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 72 bp | GCATTTGGGAGGCCTCAACCATTCCTGAGGTACTGGTaGTGGCAGTTGCAAGTATCTTTTGCTGCACTGAAG | + |
Preference number: 6 (lower is better) Translates to: AFGRPQPFLRYW*WQLQVSFAALK Trigger: CTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGTTGAGGCCTCCCAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS GCA 72 bp | GAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTGCTaGACTGAAGGAGGCAATGATGACGCTGGTACAGAT | + |
Preference number: 6 (lower is better) Translates to: EVLVVAVASIFC*TEGGNDDAGTD Trigger: ATCTGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 72 bp | TTCTTCTCTGCCCTTAGATTGGCCATGGAAGCAAGCTaGGTATTGGAAAGTGATTTTGTCTCCATCTGGGAA | + |
Preference number: 6 (lower is better) Translates to: FFSALRLAMEAS*VLESDFVSIWE Trigger: TTCCCAGATGGAGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CCA 72 bp | CTGCTAAAGGAATCGAAACCTTCTCCAGAGGTCAAATaGTCAGGAATTCGAGTAAGGCACACTCTCAAATCC | + |
Preference number: 6 (lower is better) Translates to: LLKESKPSPEVK*SGIRVRHTLKS Trigger: GGATTTGAGAGTGTGCCTTACTCGAATTCCTGACCATTTGACCTCTGGAGAAGGTTTCGATTCCTTTAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369763.5 ENST00000485275.2 ENST00000494675.5 |
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CDS CAA 72 bp | TCTTGTCATTTCTTCCTTGGGCACCTTTATCTGATGTaGATGCCATCTCATTATGGATCAACGCGAGGCGTT | + |
Preference number: 6 (lower is better) Translates to: SCHFFLGHLYLM*MPSHYGSTRGV Trigger: AACGCCTCGCGTTGATCCATAATGAGATGGCATCAACATCAGATAAAGGTGCCCAAGGAAGAAATGACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485275.2 |
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CDS CCA 72 bp | TCTCCACTTTATTCTTCTCTGCCCTTAGATTGGCCATaGAAGCAAGCTGGGTATTGGAAAGTGATTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: SPLYSSLPLDWP*KQAGYWKVILS Trigger: AGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS TCA 72 bp | AGTATCAGGAGAAACAGAATTCTGTTGGTCAATTTGTaGTGGCAGAACATCTGTCCCCTTTTTAGCCAACAG | + |
Preference number: 6 (lower is better) Translates to: SIRRNRILLVNL*WQNICPLFSQQ Trigger: CTGTTGGCTAAAAAGGGGACAGATGTTCTGCCATCACAAATTGACCAACAGAATTCTGTTTCTCCTGATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CAA 72 bp | TCTTGTCATTTCTTCCTTGGGCACCTTTATCTGATGTaGATGCCATCTCATTATGGATCTTTGGTTCTTGGT | + |
Preference number: 6 (lower is better) Translates to: SCHFFLGHLYLM*MPSHYGSLVLG Trigger: ACCAAGAACCAAAGATCCATAATGAGATGGCATCAACATCAGATAAAGGTGCCCAAGGAAGAAATGACAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369763.5 |
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CDS CAA 72 bp | CTCATGGGTATAGTATTCCATCTCAGTTCTCTTTTCTaGTCTGGTTTTGCTGTGACTCGTGAGAATGTTATG | + |
Preference number: 6 (lower is better) Translates to: LMGIVFHLSSLF*SGFAVTRENVM Trigger: CATAACATTCTCACGAGTCACAGCAAAACCAGACAAGAAAAGAGAACTGAGATGGAATACTATACCCATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369763.5 ENST00000485275.2 ENST00000494675.5 |