RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRIF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000121931

Ensembl transcript IDs: ENST00000369763.5, ENST00000485275.2, ENST00000494675.5

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGCTTCGGGACGAGGTCGCGCACCGCGCAGAAACCGGAAGGCTCCTaGCGGTGGACTGCGCCCTCACAGCCCTACGCTGAGAGAGAATCG +
Preference number: 5 (lower is better)
Translates to: GFGTRSRTAQKPEGS*RWTAPSQPYAERES
Trigger: CGATTCTCTCTCAGCGTAGGGCTGTGAGGGCGCAGTCCACCGCCAGGAGCCTTCCGGTTTCTGCGCGGTGCGCGACCTCGTCCCGAAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485275.2
CDS CCA 90 bp ACACCTCATCCAGAAAAGTGGGAAGCGTGGGGCCGAGTTTCCCAATaGGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGGAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: TPHPEKWEAWGRVSQ*GENQSEGMLGWSCP
Trigger: TGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAAACTCGGCCCCACGCTTCCCACTTTTCTGGATGAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369763.5
ENST00000485275.2
CDS TCA 90 bp GACGCTGGTACAGATTTCACTTCAGCATGGGCTGGAATCTGTAAATaGTGCCCAGAAGGCAAAACTGGAGACTTCACAGTCACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: DAGTDFTSAWAGICK*CPEGKTGDFTVTGR
Trigger: TCTTCCAGTGACTGTGAAGTCTCCAGTTTTGCCTTCTGGGCATCATTTACAGATTCCAGCCCATGCTGAAGTGAAATCTGTACCAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS GCA 90 bp ACCATTCCTGAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTGCTaGACTGAAGGAGGCAATGATGACGCTGGTACAGATTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: TIPEVLVVAVASIFC*TEGGNDDAGTDFTS
Trigger: TGAAGTGAAATCTGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS GCA 90 bp TCAACCATTCCTGAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTaGTGCACTGAAGGAGGCAATGATGACGCTGGTACAGATTTCACT +
Preference number: 5 (lower is better)
Translates to: STIPEVLVVAVASIF*CTEGGNDDAGTDFT
Trigger: AGTGAAATCTGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 90 bp GAGATGGTTTCTCCACTTTATTCTTCTCTGCCCTTAGATTGGCCATaGAAGCAAGCTGGGTATTGGAAAGTGATTTTGTCTCCATCTGGG +
Preference number: 5 (lower is better)
Translates to: EMVSPLYSSLPLDWP*KQAGYWKVILSPSG
Trigger: CCCAGATGGAGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGAGAAACCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 90 bp TCCACTTTATTCTTCTCTGCCCTTAGATTGGCCATGGAAGCAAGCTaGGTATTGGAAAGTGATTTTGTCTCCATCTGGGAAGATTTACTT +
Preference number: 5 (lower is better)
Translates to: STLFFSALRLAMEAS*VLESDFVSIWEDLL
Trigger: AAGTAAATCTTCCCAGATGGAGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 90 bp TTTACCAAACTGCTAAAGGAATCGAAACCTTCTCCAGAGGTCAAATaGTCAGGAATTCGAGTAAGGCACACTCTCAAATCCTTAGTAAGG +
Preference number: 5 (lower is better)
Translates to: FTKLLKESKPSPEVK*SGIRVRHTLKSLVR
Trigger: CCTTACTAAGGATTTGAGAGTGTGCCTTACTCGAATTCCTGACCATTTGACCTCTGGAGAAGGTTTCGATTCCTTTAGCAGTTTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369763.5
ENST00000485275.2
ENST00000494675.5
CDS TCA 90 bp TCTTACTGGAGTATCAGGAGAAACAGAATTCTGTTGGTCAATTTGTaGTGGCAGAACATCTGTCCCCTTTTTAGCCAACAGATAGACTTT +
Preference number: 5 (lower is better)
Translates to: SYWSIRRNRILLVNL*WQNICPLFSQQIDF
Trigger: AAAGTCTATCTGTTGGCTAAAAAGGGGACAGATGTTCTGCCATCACAAATTGACCAACAGAATTCTGTTTCTCCTGATACTCCAGTAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS TCA 90 bp GGTTTTCCTGTATTCCCTTTCAAAGCATCAGACATGACTGAAGATTaGACTAGTGGTATAAGATTTCCAGAAGACTTAGGAATTGGAAGT +
Preference number: 5 (lower is better)
Translates to: GFPVFPFKASDMTED*TSGIRFPEDLGIGS
Trigger: ACTTCCAATTCCTAAGTCTTCTGGAAATCTTATACCACTAGTTCAATCTTCAGTCATGTCTGATGCTTTGAAAGGGAATACAGGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369763.5
ENST00000494675.5
CDS TCA 90 bp CTCATTATGGATCTTTGGTTCTTGGTCTCTGAAAACACACTGTTGTaGAGTAACAGTTGTTGCATCAACAGAGGAACTTATTTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: LIMDLWFLVSENTLL*SNSCCINRGTYFLY
Trigger: ATAGAGAAAATAAGTTCCTCTGTTGATGCAACAACTGTTACTTCACAACAGTGTGTTTTCAGAGACCAAGAACCAAAGATCCATAATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 72 bp ACGAGGTCGCGCACCGCGCAGAAACCGGAAGGCTCCTaGCGGTGGACTGCGCCCTCACAGCCCTACGCTGAG +
Preference number: 6 (lower is better)
Translates to: TRSRTAQKPEGS*RWTAPSQPYAE
Trigger: CTCAGCGTAGGGCTGTGAGGGCGCAGTCCACCGCCAGGAGCCTTCCGGTTTCTGCGCGGTGCGCGACCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485275.2
CDS CCA 72 bp CCAGAAAAGTGGGAAGCGTGGGGCCGAGTTTCCCAATaGGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PEKWEAWGRVSQ*GENQSEGMLGW
Trigger: CCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAAACTCGGCCCCACGCTTCCCACTTTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369763.5
ENST00000485275.2
CDS CAA 90 bp TTCCCAATGGGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGGAGTaGCCCACAGCAACTGTGAGGGGTTCGACCTTAACGGAGGGCGAC +
Preference number: 6 (lower is better)
Translates to: FPMGREPERGNVGLE*PTATVRGSTLTEGD
Trigger: GTCGCCCTCCGTTAAGGTCGAACCCCTCACAGTTGCTGTGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369763.5
ENST00000485275.2
CDS CAA 72 bp GGGCGAGAACCAGAGCGAGGGAATGTTGGGCTGGAGTaGCCCACAGCAACTGTGAGGGGTTCGACCTTAACG +
Preference number: 6 (lower is better)
Translates to: GREPERGNVGLE*PTATVRGSTLT
Trigger: CGTTAAGGTCGAACCCCTCACAGTTGCTGTGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369763.5
ENST00000485275.2
CDS CCA 72 bp TTTCCCAATGGGGCGAGAACCAGAGCGAGGGAATGTTaGGCTGGAGTTGCCCACAGCAACTGTGAGGGGTTC +
Preference number: 6 (lower is better)
Translates to: FPNGARTRAREC*AGVAHSNCEGF
Trigger: GAACCCCTCACAGTTGCTGTGGGCAACTCCAGCCCAACATTCCCTCGCTCTGGTTCTCGCCCCATTGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369763.5
ENST00000485275.2
CDS GCA 72 bp CTTGGTACATGCAGCCTGAAACACAACGCGAGGCGTTaGCTGAATTTTCCTCTGCGGGTTTCAGGAAGACCC +
Preference number: 6 (lower is better)
Translates to: LGTCSLKHNARR*LNFPLRVSGRP
Trigger: GGGTCTTCCTGAAACCCGCAGAGGAAAATTCAGGCAACGCCTCGCGTTGTGTTTCAGGCTGCATGTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS GCA 72 bp TTCCATCCGAGCCAATCGTCTGAACTACTTGGTACATaGAGCCTGAAACACAACGCGAGGCGTTGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: FHPSQSSELLGT*SLKHNARRCLN
Trigger: ATTCAGGCAACGCCTCGCGTTGTGTTTCAGGCTGCATGTACCAAGTAGTTCAGACGATTGGCTCGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS GCA 72 bp CCTGAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTaGTGCACTGAAGGAGGCAATGATGACGCTGGTACA +
Preference number: 6 (lower is better)
Translates to: PEVLVVAVASIF*CTEGGNDDAGT
Trigger: TGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS GCA 72 bp GTTGATGCCATCTCATTATGGATCAACGCGAGGCGTTaGCTGAATTTTCCTCTGCGGGTTTCAGGAAGACCC +
Preference number: 6 (lower is better)
Translates to: VDAISLWINARR*LNFPLRVSGRP
Trigger: GGGTCTTCCTGAAACCCGCAGAGGAAAATTCAGGCAACGCCTCGCGTTGATCCATAATGAGATGGCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485275.2
CDS CCA 72 bp TTTGGGAGGCCTCAACCATTCCTGAGGTACTGGTGGTaGCAGTTGCAAGTATCTTTTGCTGCACTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: FGRPQPFLRYWW*QLQVSFAALKE
Trigger: CTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGTTGAGGCCTCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 72 bp GCATTTGGGAGGCCTCAACCATTCCTGAGGTACTGGTaGTGGCAGTTGCAAGTATCTTTTGCTGCACTGAAG +
Preference number: 6 (lower is better)
Translates to: AFGRPQPFLRYW*WQLQVSFAALK
Trigger: CTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTCAGGAATGGTTGAGGCCTCCCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS GCA 72 bp GAGGTACTGGTGGTGGCAGTTGCAAGTATCTTTTGCTaGACTGAAGGAGGCAATGATGACGCTGGTACAGAT +
Preference number: 6 (lower is better)
Translates to: EVLVVAVASIFC*TEGGNDDAGTD
Trigger: ATCTGTACCAGCGTCATCATTGCCTCCTTCAGTGCAGCAAAAGATACTTGCAACTGCCACCACCAGTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 72 bp TTCTTCTCTGCCCTTAGATTGGCCATGGAAGCAAGCTaGGTATTGGAAAGTGATTTTGTCTCCATCTGGGAA +
Preference number: 6 (lower is better)
Translates to: FFSALRLAMEAS*VLESDFVSIWE
Trigger: TTCCCAGATGGAGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CCA 72 bp CTGCTAAAGGAATCGAAACCTTCTCCAGAGGTCAAATaGTCAGGAATTCGAGTAAGGCACACTCTCAAATCC +
Preference number: 6 (lower is better)
Translates to: LLKESKPSPEVK*SGIRVRHTLKS
Trigger: GGATTTGAGAGTGTGCCTTACTCGAATTCCTGACCATTTGACCTCTGGAGAAGGTTTCGATTCCTTTAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369763.5
ENST00000485275.2
ENST00000494675.5
CDS CAA 72 bp TCTTGTCATTTCTTCCTTGGGCACCTTTATCTGATGTaGATGCCATCTCATTATGGATCAACGCGAGGCGTT +
Preference number: 6 (lower is better)
Translates to: SCHFFLGHLYLM*MPSHYGSTRGV
Trigger: AACGCCTCGCGTTGATCCATAATGAGATGGCATCAACATCAGATAAAGGTGCCCAAGGAAGAAATGACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485275.2
CDS CCA 72 bp TCTCCACTTTATTCTTCTCTGCCCTTAGATTGGCCATaGAAGCAAGCTGGGTATTGGAAAGTGATTTTGTCT +
Preference number: 6 (lower is better)
Translates to: SPLYSSLPLDWP*KQAGYWKVILS
Trigger: AGACAAAATCACTTTCCAATACCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS TCA 72 bp AGTATCAGGAGAAACAGAATTCTGTTGGTCAATTTGTaGTGGCAGAACATCTGTCCCCTTTTTAGCCAACAG +
Preference number: 6 (lower is better)
Translates to: SIRRNRILLVNL*WQNICPLFSQQ
Trigger: CTGTTGGCTAAAAAGGGGACAGATGTTCTGCCATCACAAATTGACCAACAGAATTCTGTTTCTCCTGATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CAA 72 bp TCTTGTCATTTCTTCCTTGGGCACCTTTATCTGATGTaGATGCCATCTCATTATGGATCTTTGGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: SCHFFLGHLYLM*MPSHYGSLVLG
Trigger: ACCAAGAACCAAAGATCCATAATGAGATGGCATCAACATCAGATAAAGGTGCCCAAGGAAGAAATGACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369763.5
CDS CAA 72 bp CTCATGGGTATAGTATTCCATCTCAGTTCTCTTTTCTaGTCTGGTTTTGCTGTGACTCGTGAGAATGTTATG +
Preference number: 6 (lower is better)
Translates to: LMGIVFHLSSLF*SGFAVTRENVM
Trigger: CATAACATTCTCACGAGTCACAGCAAAACCAGACAAGAAAAGAGAACTGAGATGGAATACTATACCCATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369763.5
ENST00000485275.2
ENST00000494675.5