RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRFN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000165379

Ensembl transcript IDs: ENST00000298119.9, ENST00000553926.1, ENST00000554120.5, ENST00000554171.1, ENST00000555279.5

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTaGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATT +
Preference number: 2 (lower is better)
Translates to: HGLMEPVPPSSETFT*APVDNFFYDTSSTI
Trigger: AATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCGCTCACCGCCTCCCTaGGCGCCGCGGAACACAGCG +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLARSPPP*APRNTA
Trigger: CGCTGTGTTCCGCGGCGCGCAGGGAGGCGGTGAGCG...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACCGGAAAGGCGGCTCCTaGCACTGCCGCCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDRKGGS*HCRRCP
Trigger: CGGGCAGCGGCGGCAGTGGCAGGAGCCGCCTTTCCG...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTACCAAAGCGTCGCGTGTaGGCAACGGCGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVPKRRV*ATAASW
Trigger: CCAGGAGGCCGCCGTTGCCCACACGCGACGCTTTGG...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTGGCCGCGTGGAACTaGGCCCTGCGCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFLAAWN*ALRCSM
Trigger: CATGCTGCAGCGCAGGGCTCAGTTCCACGCGGCCAG...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACCCGTTCGGGCAGCTCTaGACACGCTCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDPFGQL*TRSPPP
Trigger: GGGAGGCGGTGAGCGTGTGCAGAGCTGCCCGAACGG...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACGGCACTCTGCCTGGCTaGTGCAGAAGACGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDGTLPG*CRRRTE
Trigger: CTCTGTCCGTCTTCTGCAGCAGCCAGGCAGAGTGCC...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGCAACGGCGGCCTCCTaGCCGCGTGGAACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRATAAS*PRGTEP
Trigger: GGGCTCAGTTCCACGCGGCCAGGAGGCCGCCGTTGC...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAAGTCGGCACTCTGCCTaGCTGCTGCAGAAGACGGAC +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVSRHSA*LLQKTD
Trigger: GTCCGTCTTCTGCAGCAGCCAGGCAGAGTGCCGACT...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTGCAAGAACCCGGGCATaGAGGGGCATCGCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFARTRA*RGIAEL
Trigger: TAACTCGGCGATGCCCCTTCATGCCCGGGTTCTTGC...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCAGTTCCTCACGGCTGTaGAGGAGTCGGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFSSSRL*RSRHSA
Trigger: GGCAGAGTGCCGACTCCTTCACAGCCGTGAGGAACT...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTAGTTCCTCACGGCTGTaGAGGAGTCGGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFSSSRL*RSRHSA
Trigger: GGCAGAGTGCCGACTCCTTCACAGCCGTGAGGAACT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACTGCCACTGCCGCCGCTaGCCGCAGGTCGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNCHCRR*PQVALG
Trigger: ACCCAGAGCGACCTGCGGGCAGCGGCGGCAGTGGCA...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCGGTCCTTCTCACGATTaGCTTCGAAGCCCACCGGAC +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGGPSHD*LRSPPD
Trigger: GTCCGGTGGGCTTCGAAGCCAATCGTGAGAAGGACC...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTGCTGCAATCGCCCCATaGAACCCGCGGCTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLAAIAP*NPRLRA
Trigger: GGCGCGGAGCCGCGGGTTTCATGGGGCGATTGCAGC...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCACTTCGCTGCCCTTTaGCATAGCTCAGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFHFAAL*HSSAPA
Trigger: TGCGGGTGCTGAGCTATGGCAAAGGGCAGCGAAGTG...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR GCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACGGCACTCTGCCTGGCTaGTGCAGAAGACGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDGTLPG*CRRRTE
Trigger: CTCTGTCCGTCTTCTGCAGCAGCCAGGCAGAGTGCC...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATCGCTGGCCACCGCGCTaGGGCGAGTCCGCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNRWPPR*GESAVQ
Trigger: CTGAACTGCGGACTCGCCCCAGCGCGGTGGCCAGCG...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCAGGAAAATGGGTCTaGGCGTCCTCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLAPGKWV*ASSELC
Trigger: GCAGAGCTCTGAGGACGCCCAGACCCATTTTCCTGG...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACCTGGTGACATTTTGGTaGGGAGGAGGGAGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDLVTFW*GGGSRE
Trigger: TTCTCGGCTCCCTCCTCCCCACCAAAATGTCACCAG...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCACGTGGGCCCCTCTGTaGCAGAATCGGGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFTWAPL*QNREDG
Trigger: GCCGTCCTCCCGATTCTGTCACAGAGGGGCCCACGT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCGGGTGGGGGAATCGCTaGAATCGCCCCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTGWGNR*NRPMKP
Trigger: GGGTTTCATGGGGCGATTGCAGCGATTCCCCCACCC...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGGCACTCTGCCTGGCTaGTGCAGAAGACGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRGTLPG*CRRRTE
Trigger: CTCTGTCCGTCTTCTGCAGCAGCCAGGCAGAGTGCC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTTTGCACCTCAGTGTTaGCCTTTGTCCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGFAPQC*PLSLQD
Trigger: GTCCTGGAGGGACAAAGGGCAACACTGAGGTGCAAA...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCGGTCTCCCCTGGCTTTaGACCTCAGTGTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFGLPWL*TSVLPF
Trigger: AAAGGGCAACACTGAGGTGCAAAGCCAGGGGAGACC...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACTGTCTAGGTTTCGTTaGTCTGCCCCACCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRLSRFR*SAPPPS
Trigger: GGACGGGGGTGGGGCAGACCAACGAAACCTAGACAG...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTGCCCGCAGGTCGCTCTaGGTGGGGGAATCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSARRSL*VGESLQ
Trigger: TTGCAGCGATTCCCCCACCCAGAGCGACCTGCGGGC...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTACAATCCCGGCAAGGTaGCTCCAGGTGGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLATIPAR*LQVAFT
Trigger: TGTGAAAGCCACCTGGAGCCACCTTGCCGGGATTGT...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR CCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACGTCCCACAGCTTGTTTaGACACGGACTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDVPQLV*TRTGAA
Trigger: CGCTGCCCCAGTCCGTGTCCAAACAAGCTGTGGGAC...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTACGCTTTGGACAGATCTaGGCTTTCACTGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVRFGQI*AFTAMP
Trigger: TGGCATAGCAGTGAAAGCTCAGATCTGTCCAAAGCG...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACCGCTTTGGACAGATCTaGGCTTTCACTGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDRFGQI*AFTAMP
Trigger: TGGCATAGCAGTGAAAGCTCAGATCTGTCCAAAGCG...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAAACCGAGTCATCTTGTaGAAATGGGAGAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVNRVIL*KWEKVP
Trigger: GGGGACCTTCTCCCATTTGCACAAGATGACTCGGTT...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACGGTCTCCCCTGGCTTTaGACCTCAGTGTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDGLPWL*TSVLPF
Trigger: AAAGGGCAACACTGAGGTGCAAAGCCAGGGGAGACC...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACGGACGGCTAGCTAACTaGAAGGCAGTTGAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDGRLAN*KAVELF
Trigger: GAACAACTCAACTGCCTTGCAGTTAGCTAGCCGTCC...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAGCGATCCACACACCTaGGTCCACAGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFSDPHT*VHSPAA
Trigger: GGCTGCTGGGCTGTGGACCCAGGTGTGTGGATCGCT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACCAAGGTGGCTCCAGGTaGCTTTCACAGTCGTACGCG +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDQGGSR*LSQSYA
Trigger: CGCGTACGACTGTGAAAGCCACCTGGAGCCACCTTG...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR CCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACGGTGTCAAAAGATaGGTGCTCGGCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVDGVKR*VLGCYI
Trigger: TATGTAGCAGCCGAGCACCCATCTTTTGACACCGTC...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTCTTCCTCTCTCCTCTaGGTGTGTGTGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFSSSLL*VCVCLS
Trigger: AGACAGACACACACACACTCAGAGGAGAGAGGAAGA...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGAGCCGAGAAAGGGCTaGGGAAGAGTCGGGGATTTT +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLREPRKG*GRVGDF
Trigger: AAAATCCCCGACTCTTCCTCAGCCCTTTCTCGGCTC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAGTTCCTCACGGCTGTaGAGGAGTCGGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNSSSRL*RSRHSA
Trigger: GGCAGAGTGCCGACTCCTTCACAGCCGTGAGGAACT...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCCTACAGCCTTGTATTTaGGCCCCGTTAGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGLQPCI*APLVWE
Trigger: TTCCCAAACTAACGGGGCTCAAATACAAGGCTGTAG...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGATGGAGGAGCCCTCTaGCACACTTTCCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRDGGAL*HTFLDQ
Trigger: CTGGTCGAGGAAAGTGTGTCAGAGGGCTCCTCCATC...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACTTTGGGACACAGAAGTaGTTGAAGTCCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDFGTQK*LKSRKE
Trigger: CTCCTTCCTGGACTTCAAGCACTTCTGTGTCCCAAA...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCGCTTTCCAAGCTTCTaGGTAAAGCGATCCACACAC +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFRFPSF*VKRSTH
Trigger: GTGTGTGGATCGCTTTACCCAGAAGCTTGGAAAGCG...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTACAACACCTGGATGAATaGTTACAGGGATTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVQHLDE*LQGFWC
Trigger: GCACCAGAATCCCTGTAACCATTCATCCAGGTGTTG...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR CCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCCAACACCTGGATGAATaGTTACAGGGATTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGQHLDE*LQGFWC
Trigger: GCACCAGAATCCCTGTAACCATTCATCCAGGTGTTG...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR CCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAGTCGGCACTCTGCCTaGCTGCTGCAGAAGACGGAC +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFSRHSA*LLQKTD
Trigger: GTCCGTCTTCTGCAGCAGCCAGGCAGAGTGCCGACT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACCGCTTTGGACAGATCTaGGCTTTCACTGCTATGCCA +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDRFGQI*AFTAMP
Trigger: TGGCATAGCAGTGAAAGCTCAGATCTGTCCAAAGCG...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCTCTTCTTCAGGAATTaGCCAAAAGTAGCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFLFFRN*PKVAAS
Trigger: ACTGGCCGCTACTTTTGGTCAATTCCTGAAGAAGAG...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCTCATCTCATGTGTATaGCGAGTAATGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFLISCV*RVMRGG
Trigger: GCCTCCTCTCATTACTCGTCATACACATGAGATGAG...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACCAGCAGCCAGATTATTaGCCAGAAAAGTTTTGCTCG +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDQQPDY*PEKFCS
Trigger: CGAGCAAAACTTTTCTGGTCAATAATCTGGCTGCTG...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACGGACACAGAAGTGCTTaGAGTCCAGGAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHGHRSA*SPGRRQ
Trigger: TTGCCTCCTTCCTGGACTTCAAGCACTTCTGTGTCC...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTGCGTCCTCAGAGCTCTaGAAGAACCCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSASSEL*KNPGMK
Trigger: CTTCATGCCCGGGTTCTTGCAGAGCTCTGAGGACGC...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACCACTTCGCTGCCCTTTaGCATAGCTCAGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNHFAAL*HSSAPA
Trigger: TGCGGGTGCTGAGCTATGGCAAAGGGCAGCGAAGTG...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR GCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGGAAGACTTTCTGCCTaGAGGTACAATCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRGRLSA*RYNPGK
Trigger: CTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR GCA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAAGATGGGTGCTCGGCTaGTACATATCTTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRRWVLG*YISSQH
Trigger: GTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCGTGTCAAAAGATGGGTaGTCGGCTGCTACATATCTT +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGVSKDG*SAATYL
Trigger: AAGATATGTAGCAGCCGAGCACCCATCTTTTGACAC...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACATCCACTATTTGTGTTaGTTCCCCAGCAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDIHYLC*FPSRIG
Trigger: TCCAATCCTGCTGGGGAAGCAACACAAATAGTGGAT...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTACGGACCGTGCAAAATaGATTATATGGGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFTDRAK*IIWVGC
Trigger: ACAGCCCACCCATATAATCCATTTTGCACGGTCCGT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAACACACGCAGCTAGCTaGAAAGCGGCTTACAAAACA +
Preference number: 4 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRTHAAS*KAAYKT
Trigger: TGTTTTGTAAGCCGCTTTCCAGCTAGCTGCGTGTGT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACGAGCTGGTGACATTTTaGTGGGGAGGAGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNELVTF*WGGGSR
Trigger: TCGGCTCCCTCCTCCCCACCAAAATGTCACCAGCTC...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACCAAGGTGGCTCCAGGTaGCTTTCACAGTCGTACGCG +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNQGGSR*LSQSYA
Trigger: CGCGTACGACTGTGAAAGCCACCTGGAGCCACCTTG...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR CCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACACAGACACAACGCTTTaGACAGATCTGAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDTDTTL*TDLSFH
Trigger: GTGAAAGCTCAGATCTGTCCAAAGCGTTGTGTCTGT...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTGTCATCTTGTGCAAATaGGAGAAGGTCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFVILCK*EKVPLG
Trigger: TCCTAAGGGGACCTTCTCCCATTTGCACAAGATGAC...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACTAAGTCATCTTCTCTaGACAGACGCCTCAACCACA +
Preference number: 4 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRLSHLL*TDASTT
Trigger: TGTGGTTGAGGCGTCTGTCCAGAGAAGATGACTTAG...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCTAAGTCATCTTCTCTaGACAGACGCCTCAACCACA +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLALSHLL*TDASTT
Trigger: TGTGGTTGAGGCGTCTGTCCAGAGAAGATGACTTAG...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTGTTCCGTAGTAAACTaGATGCAACCCACGACTCTT +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGCSVVN*MQPTTL
Trigger: AAGAGTCGTGGGTTGCATCCAGTTTACTACGGAACA...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAAAAGAGGATGAACCATaGTCTAATGGAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVKEDEP*SNGASS
Trigger: GGAACTGGCTCCATTAGACCATGGTTCATCCTCTTT...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
3UTR CAA 72 bp ATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTaGGCTCCTGTAGACAATTTCTTCTACGACACCAGT +
Preference number: 4 (lower is better)
Translates to: MEPVPPSSETFT*APVDNFFYDTS
Trigger: ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACCTCTTCTTCAGGAATTaGCCAAAAGTAGCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDLFFRN*PKVAAS
Trigger: ACTGGCCGCTACTTTTGGTCAATTCCTGAAGAAGAG...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGGAAGACTTTCTGCCTaGAGGTACAATCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRGRLSA*RYNPGK
Trigger: CTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCC...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR GCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGACGTAGGAAGACTTTCTaGCTGCAGGTACAATCCCGG +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRRRKTF*LQVQSR
Trigger: CCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACG...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR GCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACGGTCTCCCCTGGCTTTaGACCTCAGTGTTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNGLPWL*TSVLPF
Trigger: AAAGGGCAACACTGAGGTGCAAAGCCAGGGGAGACC...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTATCCACTATTTGTGTTaGTTCCCCAGCAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFIHYLC*FPSRIG
Trigger: TCCAATCCTGCTGGGGAAGCAACACAAATAGTGGAT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTTGGTGACCTTGTGTTaGCCATTATTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGLVTLC*PLLLQT
Trigger: GGTTTGCAACAATAATGGGCAACACAAGGTCACCAA...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTGCAAAATGGATTATATaGGTGGGCTGTGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLAAKWII*VGCVHS
Trigger: GCTGTGAACACAGCCCACCCATATAATCCATTTTGC...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCATCCAGCCAGGAAAATaGGTCTGGGCGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFIQPGK*VWASSE
Trigger: CTCTGAGGACGCCCAGACCCATTTTCCTGGCTGGAT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACGACGGTGTCAAAAGATaGGTGCTCGGCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHDGVKR*VLGCYI
Trigger: TATGTAGCAGCCGAGCACCCATCTTTTGACACCGTC...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTAGGTTTAAGAGCTTCTaGAGCCTGAAGAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLARFKSF*SLKSSS
Trigger: TGAGGAACTCTTCAGGCTCCAGAAGCTCTTAAACCT...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTAGGTTTAAGAGCTTCTaGAGCCTGAAGAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFRFKSF*SLKSSS
Trigger: TGAGGAACTCTTCAGGCTCCAGAAGCTCTTAAACCT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACGTCATCTTGTGCAAATaGGAGAAGGTCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDVILCK*EKVPLG
Trigger: TCCTAAGGGGACCTTCTCCCATTTGCACAAGATGAC...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTGTTTGGACACGGACTaGGGCAGCGTTACACTACAG +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQCLDTD*GSVTLQ
Trigger: CTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACA...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACCTCATCTCATGTGTATaGCGAGTAATGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDLISCV*RVMRGG
Trigger: GCCTCCTCTCATTACTCGTCATACACATGAGATGAG...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCCATTGTACTGGATTTaGAACATACGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFPLYWI*NIRIPG
Trigger: CCCTGGAATACGTATGTTTCAAATCCAGTACAATGG...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCATTGTACTGGATTTaGAACATACGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFPLYWI*NIRIPG
Trigger: CCCTGGAATACGTATGTTTCAAATCCAGTACAATGG...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTTTCTCAACACCTGGATaGATGGTTACAGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFFSTPG*MVTGIL
Trigger: AAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAA...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTCGTAGGAAGACTTTCTaGCTGCAGGTACAATCCCGG +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSRRKTF*LQVQSR
Trigger: CCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACG...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR GCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCGATCTGAGCTTTCACTaGTATGCCAATGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFDLSFH*YANEKQ
Trigger: CTGTTTCTCATTGGCATAGCAGTGAAAGCTCAGATC...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACCTTGGCACAAAGGGTTaGAAGATTAGGAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDLGTKG*KIRRQN
Trigger: ATTTTGTCTCCTAATCTTGCAACCCTTTGTGCCAAG...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTTGTAACAAAATTGTCTaGCAACCGCAGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLACNKIV*QPQFHS
Trigger: ACTGTGGAACTGCGGTTGGCAGACAATTTTGTTACA...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGAACCGAGTCATCTTGTaGAAATGGGAGAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQNRVIL*KWEKVP
Trigger: GGGGACCTTCTCCCATTTGCACAAGATGACTCGGTT...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCATTTGGCTTTATATGTaGTCTTTTAGACGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFIWLYM*SFRRGP
Trigger: GGGCCCACGTCTAAAAGAGCACATATAAAGCCAAAT...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTATCTTCTCAACACCTaGATGAATGGTTACAGGGAT +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGYLLNT*MNGYRD
Trigger: ATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATA...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACTAAGTCATCTTCTCTaGACAGACGCCTCAACCACA +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRLSHLL*TDASTT
Trigger: TGTGGTTGAGGCGTCTGTCCAGAGAAGATGACTTAG...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCGTTTCCTGGACAATCTaGTCAACATTAGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGVSWTI*STLVSK
Trigger: TTTGCTGACTAATGTTGACCAGATTGTCCAGGAAAC...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554171.1
CDS-3UTR CCA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAACACCTGGATGAATaGTTACAGGGATTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRQHLDE*LQGFFW
Trigger: CCAAAAGAATCCCTGTAACCATTCATCCAGGTGTTG...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR TCA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCCATGCCAAGATGACTTaGAAAGGTAGCCAACATCCA +
Preference number: 4 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTHAKMT*KGSQHP
Trigger: TGGATGTTGGCTACCTTTTCAAGTCATCTTGGCATG...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAAAGCATCTCCAAAGCTaGTTTCAGAGGACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRKHLQS*FQRTVS
Trigger: TGACACCGTCCTCTGAAATCAGCTTTGGAGATGCTT...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCAGGTCAGCGAAAGCATaGGGTGTAATAAAACTTATT +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGRSAKA*GVIKLI
Trigger: AATAAGTTTTATTACACCTCATGCTTTCGCTGACCT...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAGGAGAAATCCAGTaGATTGCAGGCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSSGEIQ*IAGSGS
Trigger: AGACCCTGAGCCTGCAATTCACTGGATTTCTCCTGA...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTAAAACTGAGACTGCATaGAATGGCAACGCACATAAT +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLAKTETA*NGNAHN
Trigger: ATTATGTGCGTTGCCATTTCATGCAGTCTCAGTTTT...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTATAAAACAGTCCTGCTaGACTTCTAAGTTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFIKQSC*TSKFLS
Trigger: GCTTAGGAACTTAGAAGTTCAGCAGGACTGTTTTAT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR TCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAGTGGAGTCAGTTCCTaGTTAGTGTCTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNSGVSS*LVSGVD
Trigger: GTCAACCCCAGACACTAATCAGGAACTGACTCCACT...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGTGTCAAAAGATGGGTaGTCGGCTGCTACATATCTT +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRVSKDG*SAATYL
Trigger: AAGATATGTAGCAGCCGAGCACCCATCTTTTGACAC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACCTGTTGCTATTCAAATaGAAAGCCCTCAAATTTCGT +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDLLLFK*KALKFR
Trigger: ACGAAATTTGAGGGCTTTGCATTTGAATAGCAACAG...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACCGAGTCATCTTGTaGAAATGGGAGAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFNRVIL*KWEKVP
Trigger: GGGGACCTTCTCCCATTTGCACAAGATGACTCGGTT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCAGGTGGTAGCTTCTaGAATTTATTTGATGTCACA +
Preference number: 4 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGSGGSF*NLFDVT
Trigger: TGTGACATCAAATAAATTGCAGAAGCTACCACCTGA...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTACAACAATTCACAATTaGAATGCAAGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFTTIHN*NARGFH
Trigger: GTGGAAACCCCTTGCATTGCAATTGTGAATTGTTGT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTACAACAATTCACAATTaGAATGCAAGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLATTIHN*NARGFH
Trigger: GTGGAAACCCCTTGCATTGCAATTGTGAATTGTTGT...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCTTTGCACCTCAGTGTTaGCCTTTGTCCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISFAPQC*PLSLQD
Trigger: GTCCTGGAGGGACAAAGGGCAACACTGAGGTGCAAA...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTTATCTTCTCAACACCTaGATGAATGGTTACAGGGAT +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFYLLNT*MNGYRD
Trigger: ATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATA...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACAGGTTTAAGAGCTTCTaGAGCCTGAAGAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHRFKSF*SLKSSS
Trigger: TGAGGAACTCTTCAGGCTCCAGAAGCTCTTAAACCT...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACACAGACACAACGCTTTaGACAGATCTGAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDTDTTL*TDLSFH
Trigger: GTGAAAGCTCAGATCTGTCCAAAGCGTTGTGTCTGT...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACACAGACACAACGCTTTaGACAGATCTGAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHTDTTL*TDLSFH
Trigger: GTGAAAGCTCAGATCTGTCCAAAGCGTTGTGTCTGT...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGGTCATCTTGTGCAAATaGGAGAAGGTCCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQVILCK*EKVPLG
Trigger: TCCTAAGGGGACCTTCTCCCATTTGCACAAGATGAC...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACTGTGGTTCTGTACTTaGCTTTGTGCCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRLWFCT*LCASLS
Trigger: AGAAAGACTGGCACAAAGCCAAGTACAGAACCACAG...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAAAGAGGATGAACCATaGTCTAATGGAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTKEDEP*SNGASS
Trigger: GGAACTGGCTCCATTAGACCATGGTTCATCCTCTTT...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACTCTTTTTCTCATTCTTaGCAGATATCCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDSFSHS*QISPPP
Trigger: AGGAGGAGGGGATATCTGCCAAGAATGAGAAAAAGA...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGATGCTATTACCAACAGTaGTCACAAGTCCCTCACTAC +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRCYYQQ*SQVPHY
Trigger: GTAGTGAGGGACTTGTGACCACTGTTGGTAATAGCA...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAGAGATAGCTGTTTCTaGACAAGAAATTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDRDSCF*TRNFLS
Trigger: AGAGAGGAAATTTCTTGTCCAGAAACAGCTATCTCT...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR TCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTGCAAGACACTCTCTTaGCCTTGTGATGTACCTGGA +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSCKTLS*PCDVPG
Trigger: TCCAGGTACATCACAAGGTCAAGAGAGTGTCTTGCA...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCTCAACACCTGGATaGATGGTTACAGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQFSTPG*MVTGIL
Trigger: CAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAA...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR TCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTAAGCATCTCCAAAGCTaGTTTCAGAGGACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSKHLQS*FQRTVS
Trigger: TGACACCGTCCTCTGAAATCAGCTTTGGAGATGCTT...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGATTAGGAGACAAAATCTaGCAGACACAACGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRLGDKI*QTQRFG
Trigger: TCCAAAGCGTTGTGTCTGTCAGATTTTGTCTCCTAA...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCCTCTTCTTCAGGAATTaGCCAAAAGTAGCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFLFFRN*PKVAAS
Trigger: ACTGGCCGCTACTTTTGGTCAATTCCTGAAGAAGAG...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTCAGGAGAAATCCAGTaGATTGCAGGCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNSGEIQ*IAGSGS
Trigger: AGACCCTGAGCCTGCAATTCACTGGATTTCTCCTGA...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACAGATCTTGTTGCATTTaGAATAAGCTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDRSCCI*NKLPFR
Trigger: CCTGAAGGGAAGCTTATTTCAAATGCAACAAGATCT...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCAAGTTTCTGAAGATTaGATCACATTGTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFQVSED*ITLSLV
Trigger: TACCAGTGACAATGTGATTCAATCTTCAGAAACTTG...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCCTCTCTTGGTTATaGTCTTCCTCATCTATAAGT +
Preference number: 4 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFFLSWL*SSSSIS
Trigger: ACTTATAGATGAGGAAGATCATAACCAAGAGAGGAA...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR TCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAATTCTTTTGGATATGTaGGGCATCTGCACCACCAAT +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRILLDM*GICTTN
Trigger: ATTGGTGGTGCAGATGCCTCACATATCCAAAAGAAT...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACGATCTGAGCTTTCACTaGTATGCCAATGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDDLSFH*YANEKQ
Trigger: CTGTTTCTCATTGGCATAGCAGTGAAAGCTCAGATC...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCTGTAACAAAATTGTCTaGCAACCGCAGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTCNKIV*QPQFHS
Trigger: ACTGTGGAACTGCGGTTGGCAGACAATTTTGTTACA...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCTGTTGCTATTCAAATaGAAAGCCCTCAAATTTCGT +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLALLLFK*KALKFR
Trigger: ACGAAATTTGAGGGCTTTGCATTTGAATAGCAACAG...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTTCAGGTGGTAGCTTCTaGAATTTATTTGATGTCACA +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFSGGSF*NLFDVT
Trigger: TGTGACATCAAATAAATTGCAGAAGCTACCACCTGA...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACAACAATTCACAATTaGAATGCAAGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDTTIHN*NARGFH
Trigger: GTGGAAACCCCTTGCATTGCAATTGTGAATTGTTGT...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACTTACCTTCCCTGGGCTaGAGCACAATAACATGTACC +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNLPSLG*STITCT
Trigger: GGTACATGTTATTGTGCTGCAGCCCAGGGAAGGTAA...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGATCTGCACCACCAATTTaGAATATCCTAATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRSAPPI*NILIPL
Trigger: AAGAGGAATTAGGATATTCCAAATTGGTGGTGCAGA...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACTTACAGGGATTCTTTTaGATATGTGAGGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDLQGFF*ICEASA
Trigger: TGCAGATGCCTCACATATCCAAAAGAATCCCTGTAA...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR TCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATAAGCATCTCCAAAGCTaGTTTCAGAGGACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNKHLQS*FQRTVS
Trigger: TGACACCGTCCTCTGAAATCAGCTTTGGAGATGCTT...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATCTCATCTCATGTGTATaGCGAGTAATGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNLISCV*RVMRGG
Trigger: GCCTCCTCTCATTACTCGTCATACACATGAGATGAG...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACAGATCTTGTTGCATTTaGAATAAGCTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDRSCCI*NKLPFR
Trigger: CCTGAAGGGAAGCTTATTTCAAATGCAACAAGATCT...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTGTGCCTCCCAAAAACTaGGACTGCATGAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLVPPKN*DCMKWQ
Trigger: TTGCCATTTCATGCAGTCTCAGTTTTTGGGAGGCAC...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATGTGGTAGAGGAGTCCTaGCTCGAACAAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNVVEES*LEQVSE
Trigger: TTCAGAAACTTGTTCGAGTCAGGACTCCTCTACCAC...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTGGGATTCAACATTTGTaGCGGCTTCATTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSGIQHL*RLHSVV
Trigger: AACCACAGAATGAAGCCGTCACAAATGTTGAATCCC...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTAGATGGGTGCTCGGCTaGTACATATCTTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLRWVLG*YISSQH
Trigger: GTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCT...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCAGATGGGTGCTCGGCTaGTACATATCTTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISRWVLG*YISSQH
Trigger: GTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCT...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACCTTGGCACAAAGGGTTaGAAGATTAGGAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDLGTKG*KIRRQN
Trigger: ATTTTGTCTCCTAATCTTGCAACCCTTTGTGCCAAG...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGATGTAACAAAATTGTCTaGCAACCGCAGTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRCNKIV*QPQFHS
Trigger: ACTGTGGAACTGCGGTTGGCAGACAATTTTGTTACA...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACTCAGGTGGTAGCTTCTaGAATTTATTTGATGTCACA +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDSGGSF*NLFDVT
Trigger: TGTGACATCAAATAAATTGCAGAAGCTACCACCTGA...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACGAATACCAGCACAGATaGTACAATGATTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHEYQHR*YNDSTN
Trigger: ATTGGTGGAATCATTGTAGCATCTGTGCTGGTATTC...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACAGCTCTTGGTATGTATaGCTACACCACTATGTTCAA +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDSSWYV*LHHYVQ
Trigger: TTGAACATAGTGGTGTAGGCATACATACCAAGAGCT...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACTATCTTCTCAACACCTaGATGAATGGTTACAGGGAT +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHYLLNT*MNGYRD
Trigger: ATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATA...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACCAGCATCCCAAGGAATaGTTTCTAGATTATTATAGG +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDQHPKE*FLDYYR
Trigger: CCTATAATAATCTAGAAACCATTCCTTGGGATGCTG...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTTCAGGCTCATGGATATaGTTTGTACTATTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFSGSWI*FVLFSK
Trigger: CTTACTAAATAGTACAAACCATATCCATGAGCCTGA...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTTCAGGCTCATGGATATaGTTTGTACTATTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLASGSWI*FVLFSK
Trigger: CTTACTAAATAGTACAAACCATATCCATGAGCCTGA...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCCCAGGATCAGGCTCATaGATATGGTTTGTACTATTT +
Preference number: 4 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTPGSGS*IWFVLF
Trigger: AAATAGTACAAACCATATCCATGAGCCTGATCCTGG...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCGTTTCCTGGACAATCTaGTCAACATTAGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTVSWTI*STLVSK
Trigger: TTTGCTGACTAATGTTGACCAGATTGTCCAGGAAAC...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554171.1
CDS-3UTR CCA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTGATGGCAATGTAAGATaGATTGATACAGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: NHGLMEPVPPSSETFTLADGNVR*IDTELD
Trigger: ATCAAGTTCTGTATCAATCCATCTTACATTGCCATC...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCAGAGACATGCCAAGATaGCTTGAAAAGGTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISRDMPR*LEKVAN
Trigger: GTTGGCTACCTTTTCAAGTCATCTTGGCATGTCTCT...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCTTCTCAACACCTGGATaGATGGTTACAGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISFSTPG*MVTGIL
Trigger: CAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAA...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR TCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACTTAGGAGACAAAATCTaGCAGACACAACGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNLGDKI*QTQRFG
Trigger: TCCAAAGCGTTGTGTCTGTCAGATTTTGTCTCCTAA...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACATTAGTGTCTGGGGTTaGCTCAATAACTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNISVWG*LNNSIS
Trigger: GGAGATAGAGTTATTGAGTCAACCCCAGACACTAAT...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAAAAACACTAGAGACATaGCAAGATGACTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRKTLET*QDDLKR
Trigger: CCTTTTCAAGTCATCTTGGCATGTCTCTAGTGTTTT...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCGTGTCAAAAGATGGGTaGTCGGCTGCTACATATCTT +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISVSKDG*SAATYL
Trigger: AAGATATGTAGCAGCCGAGCACCCATCTTTTGACAC...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGCTTGGCACAAAGGGTTaGAAGATTAGGAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQLGTKG*KIRRQN
Trigger: ATTTTGTCTCCTAATCTTGCAACCCTTTGTGCCAAG...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATATCCACTATTTGTGTTaGTTCCCCAGCAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNIHYLC*FPSRIG
Trigger: TCCAATCCTGCTGGGGAAGCAACACAAATAGTGGAT...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCTGTCTTACACATaGAGACATCTATACTACCTC +
Preference number: 4 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDFLSYT*RHLYYL
Trigger: GAGGTAGTATAGATGTCTGCATGTGTAAGACAGAAA...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCTAATTCCTCTTCTTTaGCTAGCTAACTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHLIPLL*LANSLS
Trigger: TGATAAGGAGTTAGCTAGGCAAAGAAGAGGAATTAG...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTGCTTCTGGGCAGTTaGATAAAAGACAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQLLLGS*IKDSQM
Trigger: CATTTGACTGTCTTTTATCCAACTGCCCAGAAGCAA...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp CCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACAGTCAGCAAAGCATTTaGCTTTATATGTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PPSSETFTLAPVDNFFYDSQQSI*LYMCSF
Trigger: AAAAGAGCACATATAAAGCCAAATGCTTTGCTGACT...GTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTAAAGAGGATGAACCATaGTCTAATGGAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLKEDEP*SNGASS
Trigger: GGAACTGGCTCCATTAGACCATGGTTCATCCTCTTT...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTTAGGAGACAAAATCTaGCAGACACAACGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNLGDKI*QTQRFG
Trigger: TCCAAAGCGTTGTGTCTGTCAGATTTTGTCTCCTAA...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCCATTGTACTGGATTTaGAACATACGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISPLYWI*NIRIPG
Trigger: CCCTGGAATACGTATGTTTCAAATCCAGTACAATGG...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGCTGTTGCTATTCAAATaGAAAGCCCTCAAATTTCGT +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQLLLFK*KALKFR
Trigger: ACGAAATTTGAGGGCTTTGCATTTGAATAGCAACAG...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAAATTCACAATTGCAATaGAAGGGGTTTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRNSQLQ*KGFPPK
Trigger: TTTTGGTGGAAACCCCTTGCATTGCAATTGTGAATT...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCCAGTCTTTCTTTTCTaGTTTTGGGACACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISPVFLF*FWDTEV
Trigger: CACTTCTGTGTCCCAAAAGCAGAAAAGAAAGACTGG...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR GCA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACATAATTATGTTCTGTaGTATTACCAACAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRHNYVL*YYQQWS
Trigger: TGACCACTGTTGGTAATAGCACAGAACATAATTATG...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGCAGCATCCCAAGGAATaGTTTCTAGATTATTATAGG +
Preference number: 4 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQQHPKE*FLDYYR
Trigger: CCTATAATAATCTAGAAACCATTCCTTGGGATGCTG...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACTCAGGCTCATGGATATaGTTTGTACTATTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHSGSWI*FVLFSK
Trigger: CTTACTAAATAGTACAAACCATATCCATGAGCCTGA...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTGCCATCATCATATATaGCCAAGACACACAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSCHHHI*PRHTSH
Trigger: ATGACTTGTGTGTCTTGGCCATATATGATGATGGCA...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR TCA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAGGTCAGCGAAAGCATaGGGTGTAATAAAACTTATT +
Preference number: 4 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFRSAKA*GVIKLI
Trigger: AATAAGTTTTATTACACCTCATGCTTTCGCTGACCT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTAGATCTTGTTGCATTTaGAATAAGCTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLRSCCI*NKLPFR
Trigger: CCTGAAGGGAAGCTTATTTCAAATGCAACAAGATCT...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTCACAATTGCAATaGAAGGGGTTTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNNSQLQ*KGFPPK
Trigger: TTTTGGTGGAAACCCCTTGCATTGCAATTGTGAATT...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTTGTATTTCCTTCAGTaGTCCCTGAATACCTACACT +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNLYFLQ*SLNTYT
Trigger: AGTGTAGGTATTCAGGGAGCACTGAAGGAAATACAA...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTTCATGTAACCCTTACTaGCCCTCCATAATTATGTTC +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLSCNPY*PSIIMF
Trigger: GAACATAATTATGGAGGGGCAGTAAGGGTTACATGA...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCCTTTCTAGCTACCTaGGCTTCTCCTAATATTAAT +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSSFLAT*ASPNIN
Trigger: ATTAATATTAGGAGAAGCGCAGGTAGCTAGAAAGGA...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTCAGCATCCCAAGGAATaGTTTCTAGATTATTATAGG +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSQHPKE*FLDYYR
Trigger: CCTATAATAATCTAGAAACCATTCCTTGGGATGCTG...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCCAGGATCAGGCTCATaGATATGGTTTGTACTATTT +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISPGSGS*IWFVLF
Trigger: AAATAGTACAAACCATATCCATGAGCCTGATCCTGG...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR TCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATAGGTCAGCGAAAGCATaGGGTGTAATAAAACTTATT +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNRSAKA*GVIKLI
Trigger: AATAAGTTTTATTACACCTCATGCTTTCGCTGACCT...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR GCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCAATTCACAATTGCAATaGAAGGGGTTTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISNSQLQ*KGFPPK
Trigger: TTTTGGTGGAAACCCCTTGCATTGCAATTGTGAATT...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTGATGGCAATGTAAGATaGATTGATACAGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSDGNVR*IDTELD
Trigger: ATCAAGTTCTGTATCAATCCATCTTACATTGCCATC...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CCA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTATCTCCATGTAAAGTaGAGTCAGTTCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNYLHVK*SQFLIS
Trigger: ACTAATCAGGAACTGACTCCACTTTACATGGAGATA...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR GCA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTACTTTTGGCTTCAAATaGTGTGAACCAAAACGTAAA +
Preference number: 4 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLTFGFK*CEPKRK
Trigger: TTTACGTTTTGGTTCACAGCATTTGAAGCCAAAAGT...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CCA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCTATTTAATAAGCTCTTaGTATGTATGCCTACACCAC +
Preference number: 4 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISYLISS*YVCLHH
Trigger: GTGGTGTAGGCATACATACCAAGAGCTTATTAAATA...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CCA 90 bp CCTGCGCGCCGCGGAACACAGCGCCCCGCCCGCTGGCCACCGCGCTaGGGCGAGTCCGCAGTTCAGGCGCGAGGCAAGCAGCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PARRGTQRPARWPPR*GESAVQARGKQPRS
Trigger: GGACCTCGGCTGCTTGCCTCGCGCCTGAACTGCGGACTCGCCCCAGCGCGGTGGCCAGCGGGCGGGGCGCTGTGTTCCGCGGCGCGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp GCTCACCGCCTCCCTGCGCGCCGCGGAACACAGCGCCCCGCCCGCTaGCCACCGCGCTGGGGCGAGTCCGCAGTTCAGGCGCGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: AHRLPARRGTQRPAR*PPRWGESAVQARGK
Trigger: CTTGCCTCGCGCCTGAACTGCGGACTCGCCCCAGCGCGGTGGCCAGCGGGCGGGGCGCTGTGTTCCGCGGCGCGCAGGGAGGCGGTGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp CGGCCGGGGCGGACCCGGGAGCTGGGCTTCCCAAAGCGTCGCGTGTaGGCAACGGCGGCCTCCTGGCCGCGTGGAACTGAGCCCTGCGCT +
Preference number: 5 (lower is better)
Translates to: RPGRTRELGFPKRRV*ATAASWPRGTEPCA
Trigger: AGCGCAGGGCTCAGTTCCACGCGGCCAGGAGGCCGCCGTTGCCCACACGCGACGCTTTGGGAAGCCCAGCTCCCGGGTCCGCCCCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 90 bp CATAGTCCTCCGTTCGGGCAGCTCTGCACACGCTCACCGCCTCCCTaGGCGCCGCGGAACACAGCGCCCCGCCCGCTGGCCACCGCGCTG +
Preference number: 5 (lower is better)
Translates to: HSPPFGQLCTRSPPP*APRNTAPRPLATAL
Trigger: CAGCGCGGTGGCCAGCGGGCGGGGCGCTGTGTTCCGCGGCGCGCAGGGAGGCGGTGAGCGTGTGCAGAGCTGCCCGAACGGAGGACTATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 90 bp CGCATCGTAGGGAATCGGAAAGGCGGCTCCTGCCACTGCCGCCGCTaGCCGCAGGTCGCTCTGGGTGGGGGAATCGCTGCAATCGCCCCA +
Preference number: 5 (lower is better)
Translates to: RIVGNRKGGSCHCRR*PQVALGGGIAAIAP
Trigger: TGGGGCGATTGCAGCGATTCCCCCACCCAGAGCGACCTGCGGGCAGCGGCGGCAGTGGCAGGAGCCGCCTTTCCGATTCCCTACGATGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000555279.5
CDS GCA 90 bp CTCAGCACCCGCATCGTAGGGAATCGGAAAGGCGGCTCCTGCCACTaGCGCCGCTGCCCGCAGGTCGCTCTGGGTGGGGGAATCGCTGCA +
Preference number: 5 (lower is better)
Translates to: LSTRIVGNRKGGSCH*RRCPQVALGGGIAA
Trigger: TGCAGCGATTCCCCCACCCAGAGCGACCTGCGGGCAGCGGCGGCAGTGGCAGGAGCCGCCTTTCCGATTCCCTACGATGCGGGTGCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000555279.5
CDS GCA 90 bp GCAAACACGCGCACACACATACATAGTCCTCCGTTCGGGCAGCTCTaGACACGCTCACCGCCTCCCTGCGCGCCGCGGAACACAGCGCCC +
Preference number: 5 (lower is better)
Translates to: ANTRTHIHSPPFGQL*TRSPPPCAPRNTAP
Trigger: GGGCGCTGTGTTCCGCGGCGCGCAGGGAGGCGGTGAGCGTGTGCAGAGCTGCCCGAACGGAGGACTATGTATGTGTGTGCGCGTGTTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp GCACGGGGAGGAAGCAGCACGGAGGGAACCGGTCCTTCTCACGATTaGCTTCGAAGCCCACCGGACCGCGGGCAGCAAAGAGAGCGTTCT +
Preference number: 5 (lower is better)
Translates to: ARGGSSTEGTGPSHD*LRSPPDRGQQRERS
Trigger: AGAACGCTCTCTTTGCTGCCCGCGGTCCGGTGGGCTTCGAAGCCAATCGTGAGAAGGACCGGTTCCCTCCGTGCTGCTTCCTCCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp CCTGGGTCCACAGCCCAGCAGCCGCTCCAAATCCAGCCAGGAAAATaGGTCTGGGCGTCCTCAGAGCTCTGCAAGAACCCGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PGSTAQQPLQIQPGK*VWASSELCKNPGMK
Trigger: CTTCATGCCCGGGTTCTTGCAGAGCTCTGAGGACGCCCAGACCCATTTTCCTGGCTGGATTTGGAGCGGCTGCTGGGCTGTGGACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp AAGACTTTCTGCCTGCAGGTACAATCCCGGCAAGGTGGCTCCAGGTaGCTTTCACAGTCGTACGCGGGTCTCGCTCGTCACTTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: KTFCLQVQSRQGGSR*LSQSYAGLARHFAA
Trigger: GGCAGCGAAGTGACGAGCGAGACCCGCGTACGACTGTGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000553926.1
ENST00000554120.5
ENST00000555279.5
CDS GCA 90 bp CGCCCTGGTGCCTCTAAGGGAAAAGACGGTCGTAGGAAGACTTTCTaGCTGCAGGTACAATCCCGGCAAGGTGGCTCCAGGTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RPGASKGKDGRRKTF*LQVQSRQGGSRWLS
Trigger: TGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACGACCGTCTTTTCCCTTAGAGGCACCAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553926.1
CDS CCA 90 bp AGGCGCGCGCGTACACACGCGCGCGCACACACACACGCAGCTAGCTaGAAAGCGGCTTACAAAACACTAGAGACATGCCAAGATGACTTG +
Preference number: 5 (lower is better)
Translates to: RRARTHARAHTHAAS*KAAYKTLETCQDDL
Trigger: CAAGTCATCTTGGCATGTCTCTAGTGTTTTGTAAGCCGCTTTCCAGCTAGCTGCGTGTGTGTGTGCGCGCGCGTGTGTACGCGCGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS TCA 90 bp GAAAATGGGTCTGGGCGTCCTCAGAGCTCTGCAAGAACCCGGGCATaGAGGGGCATCGCCGAGTTAACACATTTGCTTCTGGGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: ENGSGRPQSSARTRA*RGIAELTHLLLGSW
Trigger: CCAACTGCCCAGAAGCAAATGTGTTAACTCGGCGATGCCCCTTCATGCCCGGGTTCTTGCAGAGCTCTGAGGACGCCCAGACCCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp TCTCCTCCAACCCGAATCCACGTAATTCAAGAGCTGGTGACATTTTaGTGGGGAGGAGGGAGCCGAGAAAGGGCTGAGGAAGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SPPTRIHVIQELVTF*WGGGSRERAEEESG
Trigger: CCCCGACTCTTCCTCAGCCCTTTCTCGGCTCCCTCCTCCCCACCAAAATGTCACCAGCTCTTGAATTACGTGGATTCGGGTTGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS TCA 90 bp ATCAGGTTTAAGAGCTTCTGGAGCCTGAAGAGTTCCTCACGGCTGTaGAGGAGTCGGCACTCTGCCTGGCTGCTGCAGAAGACGGACAGA +
Preference number: 5 (lower is better)
Translates to: IRFKSFWSLKSSSRL*RSRHSAWLLQKTDR
Trigger: TCTGTCCGTCTTCTGCAGCAGCCAGGCAGAGTGCCGACTCCTTCACAGCCGTGAGGAACTCTTCAGGCTCCAGAAGCTCTTAAACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS GCA 90 bp CTGGTGCCTCTAAGGGAAAAGACGGTCGTAGGAAGACTTTCTGCCTaGAGGTACAATCCCGGCAAGGTGGCTCCAGGTGGCTTTCACAGT +
Preference number: 5 (lower is better)
Translates to: LVPLREKTVVGRLSA*RYNPGKVAPGGFHS
Trigger: ACTGTGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACGACCGTCTTTTCCCTTAGAGGCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000553926.1
ENST00000554120.5
ENST00000555279.5
CDS GCA 90 bp GATTCTGGTGCCTCTAAGGGAAAAGACGGTCGTAGGAAGACTTTCTaGCTGCAGGTACAATCCCGGCAAGGTGGCTCCAGGTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: DSGASKGKDGRRKTF*LQVQSRQGGSRWLS
Trigger: TGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACGACCGTCTTTTCCCTTAGAGGCACCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000554120.5
CDS-3UTR CAA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTACTTTGCACCTCAGTGTaGCCCTTTGTCCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVLCTSV*PFVPPG
Trigger: TCCTGGAGGGACAAAGGGCAACACTGAGGTGCAAAG...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACGAGAAATCCAGTGAATaGCAGGCTCAGGGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDEKSSE*QAQGLP
Trigger: GGGGAGACCCTGAGCCTGCAATTCACTGGATTTCTC...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTTTCGTGTCCCACAGCTaGTTTGGACACGGACTGGGG +
Preference number: 5 (lower is better)
Translates to: NHGLMEPVPPSSETFTLAFVSHS*FGHGLG
Trigger: CCCCAGTCCGTGTCCAAACAAGCTGTGGGACACGAA...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 90 bp AAATCTGGTGCCTCTAAGGGAAAAGACGGTCGTAGGAAGACTTTCTaGCTGCAGGTACAATCCCGGCAAGGTGGCTCCAGGTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: KSGASKGKDGRRKTF*LQVQSRQGGSRWLS
Trigger: TGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACGACCGTCTTTTCCCTTAGAGGCACCAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555279.5
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGATGTCCCACAGCTTGTTaGGACACGGACTGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRCPTAC*DTDWGS
Trigger: GCTGCCCCAGTCCGTGTCCAAACAAGCTGTGGGACA...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 90 bp GACGTGGGCCCCTCTGTGACAGAATCGGGAGGACGGCTAGCTAACTaGAAGGCAGTTGAGTTGTTCCTGTTAGTGTTTTGGGATTCAACA +
Preference number: 5 (lower is better)
Translates to: DVGPSVTESGGRLAN*KAVELFLLVFWDST
Trigger: TGTTGAATCCCAAAACACTAACAGGAACAACTCAACTGCCTTGCAGTTAGCTAGCCGTCCTCCCGATTCTGTCACAGAGGGGCCCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACGCCGAGTTAACACATTaGCTTCTGGGCAGTTGGATA +
Preference number: 5 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDAELTH*LLGSWI
Trigger: TATCCAACTGCCCAGAAGCAAATGTGTTAACTCGGC...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTATCTAACCGAGTCATCTaGTGCAAATGGGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVSNRVI*CKWEKV
Trigger: GACCTTCTCCCATTTGCACAAGATGACTCGGTTAGA...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAACTCTTCTTCAGGAATaGACCAAAAGTAGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVTLLQE*TKSSGQ
Trigger: CTGGCCGCTACTTTTGGTCAATTCCTGAAGAAGAGT...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCTTTGCACCTCAGTGTaGCCCTTTGTCCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHLCTSV*PFVPPG
Trigger: TCCTGGAGGGACAAAGGGCAACACTGAGGTGCAAAG...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCGAGAAATCCAGTGAATaGCAGGCTCAGGGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTEKSSE*QAQGLP
Trigger: GGGGAGACCCTGAGCCTGCAATTCACTGGATTTCTC...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACGAGAAATCCAGTGAATaGCAGGCTCAGGGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHEKSSE*QAQGLP
Trigger: GGGGAGACCCTGAGCCTGCAATTCACTGGATTTCTC...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCGATCCACTATTTGTGTaGCTTCCCCAGCAGGATTGG +
Preference number: 5 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFDPLFV*LPQQDW
Trigger: CCAATCCTGCTGGGGAAGCAACACAAATAGTGGATC...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAATGAAGATCCACTATTaGTGTTGCTTCCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVMKIHY*CCFPSR
Trigger: CCTGCTGGGGAAGCAACACAAATAGTGGATCTTCAT...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCCGTTACACTACAGCCTaGTATTTGAGCCCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGRYTTA*YLSPVS
Trigger: ACTAACGGGGCTCAAATACAAGGCTGTAGTGTAACG...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGGGACACAGAAGTGCTaGAAGTCCAGGAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRGTQKC*KSRKEA
Trigger: TGCCTCCTTCCTGGACTTCAAGCACTTCTGTGTCCC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATCGGTCCTTCTCACGATaGGCTTCGAAGCCCACCGGA +
Preference number: 5 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNRSFSR*ASKPTG
Trigger: TCCGGTGGGCTTCGAAGCCAATCGTGAGAAGGACCG...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp AACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTGACAGACACAACGCTTaGGACAGATCTGAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: NHGLMEPVPPSSETFTLADRHNA*DRSELS
Trigger: TGAAAGCTCAGATCTGTCCAAAGCGTTGTGTCTGTC...AGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAACTCTTCTTCAGGAATaGACCAAAAGTAGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRTLLQE*TKSSGQ
Trigger: CTGGCCGCTACTTTTGGTCAATTCCTGAAGAAGAGT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTATCAGAGACTTTCACCTaGGCTCCTGTAGACAATTTC +
Preference number: 5 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVSETFT*APVDNF
Trigger: GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGA...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCAGAGACTTTCACCTaGGCTCCTGTAGACAATTTC +
Preference number: 5 (lower is better)
Translates to: EPWSNGASSAVIRDFHLGSETFT*APVDNF
Trigger: GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGA...GCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAAATAAAAGCCCTTTCTaGGCACAAAGGGTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: GLMEPVPPSSETFTLAPVNKSPF*AQRVAR
Trigger: TCTTGCAACCCTTTGTGCCAAGAAAGGGCTTTTATT...TACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACGCTTCCCCAGCAGGATaGGAAGCAATGCAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDASPAG*EAMQVK
Trigger: TTTTACCTGCATTGCTTCCAATCCTGCTGGGGAAGC...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGCTTCCCCAGCAGGATaGGAAGCAATGCAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRASPAG*EAMQVK
Trigger: TTTTACCTGCATTGCTTCCAATCCTGCTGGGGAAGC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACTAACCTTGGTGACCTaGTGTTGCCCATTATTGTTG +
Preference number: 5 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRLTLVT*CCPLLL
Trigger: CAACAATAATGGGCAACACAAGGTCACCAAGGTTAG...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACTTGAGCCCCGTTAGTTaGGGAATAAACATTGCTAAC +
Preference number: 5 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDLSPVS*GINIAN
Trigger: GTTAGCAATGTTTATTCCCAAACTAACGGGGCTCAA...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTTTTTCTCATTCTaGGCAGATATCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFFFFSF*ADIPSS
Trigger: GGAGGAGGGGATATCTGCCAAGAATGAGAAAAAGAA...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp CTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACTACAGAGCTAACATTTaGGAGGGAGCATTAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LMEPVPPSSETFTLAPVDYRANI*EGALKP
Trigger: TGGCTTTAATGCTCCCTCCAAAATGTTAGCTCTGTA...GTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS TCA 90 bp GGTTATCAAAGTCTTCTCAAGTCTTTCAATTCTTCCTCTCTCCTCTaGGTGTGTGTGTGTCTGTCTAGGTTTCGTTGGTCTGCCCCACCC +
Preference number: 5 (lower is better)
Translates to: GYQSLLKSFNSSSLL*VCVCLSRFRWSAPP
Trigger: GGGTGGGGCAGACCAACGAAACCTAGACAGACACACACACACTCAGAGGAGAGAGGAAGAATTGAAAGACTTGAGAAGACTTTGATAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 90 bp CCAAAGCTGATTTCAGAGGACGGTGTCAAAAGATGGGTGCTCGGCTaGTACATATCTTCTCAACACCTGGATGAATGGTTACAGGGATTC +
Preference number: 5 (lower is better)
Translates to: PKLISEDGVKRWVLG*YISSQHLDEWLQGF
Trigger: GAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCTTTTGACACCGTCCTCTGAAATCAGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
ENST00000555279.5
CDS CCA 90 bp GTGAAAGCATCTCCAAAGCTGATTTCAGAGGACGGTGTCAAAAGATaGGTGCTCGGCTGCTACATATCTTCTCAACACCTGGATGAATGG +
Preference number: 5 (lower is better)
Translates to: VKASPKLISEDGVKR*VLGCYISSQHLDEW
Trigger: CCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCTTTTGACACCGTCCTCTGAAATCAGCTTTGGAGATGCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
ENST00000555279.5
CDS-3UTR CAA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCGAAGGGCTGAACTTTaGGCTTCAAATGCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHRRAEL*ASNAVN
Trigger: GTTCACAGCATTTGAAGCCAAAAGTTCAGCCCTTCG...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCGACAGACACAACGCTTaGGACAGATCTGAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTDRHNA*DRSELS
Trigger: TGAAAGCTCAGATCTGTCCAAAGCGTTGTGTCTGTC...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTCTAACCGAGTCATCTaGTGCAAATGGGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDSNRVI*CKWEKV
Trigger: GACCTTCTCCCATTTGCACAAGATGACTCGGTTAGA...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCCACAACAATTCACAATaGCAATGCAAGGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFHNNSQ*QCKGFP
Trigger: TGGAAACCCCTTGCATTGCAATTGTGAATTGTTGTG...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATCTTTGCACCTCAGTGTaGCCCTTTGTCCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNLCTSV*PFVPPG
Trigger: TCCTGGAGGGACAAAGGGCAACACTGAGGTGCAAAG...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGGATCCACTATTTGTGTaGCTTCCCCAGCAGGATTGG +
Preference number: 5 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQDPLFV*LPQQDW
Trigger: CCAATCCTGCTGGGGAAGCAACACAAATAGTGGATC...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGATCCACTATTTGTGTaGCTTCCCCAGCAGGATTGG +
Preference number: 5 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRDPLFV*LPQQDW
Trigger: CCAATCCTGCTGGGGAAGCAACACAAATAGTGGATC...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACATGAAGATCCACTATTaGTGTTGCTTCCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDMKIHY*CCFPSR
Trigger: CCTGCTGGGGAAGCAACACAAATAGTGGATCTTCAT...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTCTGTGGTTCTGTACTaGGCTTTGTGCCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDSVVLY*ALCQSF
Trigger: GAAAGACTGGCACAAAGCCAAGTACAGAACCACAGA...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAACAATAACATGTACCTaGCCCGCCACAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRTITCT*PATNSC
Trigger: ACATGAATTTGTGGCGGGCAAGGTACATGTTATTGT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACAGACACAACGCTTaGGACAGATCTGAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRDRHNA*DRSELS
Trigger: TGAAAGCTCAGATCTGTCCAAAGCGTTGTGTCTGTC...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCATATTTGTAACAAAATaGTCTGCCAACCGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: EPVPPSSETFTLAPVDNFIFVTK*SANRSS
Trigger: GGAACTGCGGTTGGCAGACAATTTTGTTACAAATAT...GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGATGAAGATCCACTATTaGTGTTGCTTCCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQMKIHY*CCFPSR
Trigger: CCTGCTGGGGAAGCAACACAAATAGTGGATCTTCAT...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAACCATTGTACTGGATTaGAAACATACGTATTCCAGG +
Preference number: 5 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRTIVLD*KHTYSR
Trigger: CCTGGAATACGTATGTTTCAAATCCAGTACAATGGT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACCAGCAGCCAGATTATaGACCAGAAAAGTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRPAARL*TRKVLL
Trigger: GAGCAAAACTTTTCTGGTCAATAATCTGGCTGCTGG...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTCAGAGACTTTCACCTaGGCTCCTGTAGACAATTTC +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDSETFT*APVDNF
Trigger: GAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGA...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGGGGAGGTTAACTACCTaGCATTCTAGTCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQGRLTT*HSSPNH
Trigger: ATGGTTGGGACTAGAATGCAAGGTAGTTAACCTCCC...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS TCA 90 bp CAAAGCAGAGGTAGTGGTAGAGGAGTCCTGACTCGAACAAGTTTCTaGAGATTGAATCACATTGTCACTGGTAGCTTTACAACACTGGGC +
Preference number: 5 (lower is better)
Translates to: QSRGSGRGVLTRTSF*RLNHIVTGSFTTLG
Trigger: GCCCAGTGTTGTAAAGCTACCAGTGACAATGTGATTCAATCTTCAGAAACTTGTTCGAGTCAGGACTCCTCTACCACTACCTCTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 90 bp GTGTCAAAAGATGGGTGCTCGGCTGCTACATATCTTCTCAACACCTaGATGAATGGTTACAGGGATTCTTTTGGATATGTGAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: VSKDGCSAATYLLNT*MNGYRDSFGYVRHL
Trigger: CAGATGCCTCACATATCCAAAAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCTTTTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCGGAAGCAGGTTAATATaGGCGCTTTCCAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFGSRLI*ALSKLL
Trigger: CAGAAGCTTGGAAAGCGCCAATATTAACCTGCTTCC...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACAATAAAAGCCCTTTCTaGGCACAAAGGGTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDNKSPF*AQRVAR
Trigger: TCTTGCAACCCTTTGTGCCAAGAAAGGGCTTTTATT...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAAATAAAAGCCCTTTCTaGGCACAAAGGGTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRNKSPF*AQRVAR
Trigger: TCTTGCAACCCTTTGTGCCAAGAAAGGGCTTTTATT...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTACCAAGCTGGTCATATaGGCAAAATCTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: GASSAVIRDFHLGSCRQFTKLVI*AKSFLL
Trigger: TAAAAGGAAAGATTTTGCCAATATGACCAGCTTGGT...AAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp TTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGAGACCACAACAATTCACAATaGCAATGCAAGGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: LKEDEPWSNGASSAVIRDHNNSQ*QCKGFP
Trigger: TGGAAACCCCTTGCATTGCAATTGTGAATTGTTGTG...GTCTCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACACTCTTCTTCAGGAATaGACCAAAAGTAGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNTLLQE*TKSSGQ
Trigger: CTGGCCGCTACTTTTGGTCAATTCCTGAAGAAGAGT...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCTGTTGCCCATTATTGTaGCAAACCTTATACCGGATC +
Preference number: 5 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTCCPLL*QTLYRI
Trigger: GATCCGGTATAAGGTTTGCAACAATAATGGGCAACA...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp GTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGCTTGGTGACCTTGTGTaGCCCATTATTGTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: VIRDFHLGSCRQFLLRHQLGDLV*PIIVAN
Trigger: GTTTGCAACAATAATGGGCAACACAAGGTCACCAAG...CTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAATGTGGAGTTTTATATaGACTATGACCAAAGACAGC +
Preference number: 5 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRMWSFI*TMTKDS
Trigger: GCTGTCTTTGGTCATAGTCAATATAAAACTCCACAT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp TCTAATGGAGCCAGTTCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGAACCATGCCTTGTAACTaGTCATCACATAGCATATTT +
Preference number: 5 (lower is better)
Translates to: SNGASSAVIRDFHLGSCRTMPCN*SSHSIF
Trigger: AAATATGCTATGTGATGACAAGTTACAAGGCATGGT...TCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGAACTGGCTCCATTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CCA 90 bp CGGCTAGCTAACTGCAAGGCAGTTGAGTTGTTCCTGTTAGTGTTTTaGGATTCAACATTTGTGACGGCTTCATTCTGTGGTTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: RLANCKAVELFLLVF*DSTFVTASFCGSVL
Trigger: AAGTACAGAACCACAGAATGAAGCCGTCACAAATGTTGAATCCCAAAACACTAACAGGAACAACTCAACTGCCTTGCAGTTAGCTAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGAGAAGAGTCGGGGATTTaGTTAAGCAGTTTAATAAGC +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLREESGI*LSSLIS
Trigger: GCTTATTAAACTGCTTAACAAAATCCCCGACTCTTC...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TCCGCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGATTGACCAGAAAAGTTTaGCTCGTAGGAGGTATCATT +
Preference number: 5 (lower is better)
Translates to: SAVIRDFHLGSCRQFLLRLTRKV*LVGGII
Trigger: AATGATACCTCCTACGAGCAAAACTTTTCTGGTCAA...TCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCACTACAGCCTTGTATTaGAGCCCCGTTAGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISTTALY*SPVSLG
Trigger: TCCCAAACTAACGGGGCTCAAATACAAGGCTGTAGT...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS TCA 90 bp TATCTCCATGTAAAGTGGAGTCAGTTCCTGATTAGTGTCTGGGGTTaGCTCAATAACTCTATCTCCTGTAACAATCTCTTCCACGGAGTG +
Preference number: 5 (lower is better)
Translates to: YLHVKWSQFLISVWG*LNNSISCNNLFHGV
Trigger: CACTCCGTGGAAGAGATTGTTACAGGAGATAGAGTTATTGAGTCAACCCCAGACACTAATCAGGAACTGACTCCACTTTACATGGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CCA 90 bp CCCTTACTGCCCCTCCATAATTATGTTCTGTGCTATTACCAACAGTaGTCACAAGTCCCTCACTACACAAAATCACCTACTTCTCCATTA +
Preference number: 5 (lower is better)
Translates to: PLLPLHNYVLCYYQQ*SQVPHYTKSPTSPL
Trigger: TAATGGAGAAGTAGGTGATTTTGTGTAGTGAGGGACTTGTGACCACTGTTGGTAATAGCACAGAACATAATTATGGAGGGGCAGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp GTTTTAAAAGAGGATGAACCATGGTCTAATGGAGCCAGTTCCGCCGTCATCAGATTTGCTTCTGGGCAGTaGGATAAAAGACAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: VLKEDEPWSNGASSAVIRFASGQ*DKRQSN
Trigger: ATTTGACTGTCTTTTATCCAACTGCCCAGAAGCAAA...TCTGATGACGGCGGAACTGGCTCCATTAGACCATGGTTCATCCTCTTTTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp GCCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACACCAAGCTGGTCATATaGGCAAAATCTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: AVIRDFHLGSCRQFLLRHTKLVI*AKSFLL
Trigger: TAAAAGGAAAGATTTTGCCAATATGACCAGCTTGGT...GTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp CCGTCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCGCTCATGGATATGGTTaGTACTATTTAGTAAGTGAG +
Preference number: 5 (lower is better)
Translates to: PSSETFTLAPVDNFFYDTAHGYG*YYLVSE
Trigger: CTCACTTACTAAATAGTACAAACCATATCCATGAGC...GGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACGTTCTGTACTTGGCTTaGTGCCAGTCTTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNVLYLA*CQSFFS
Trigger: AGAAAAGAAAGACTGGCACAAAGCCAAGTACAGAAC...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTGCAAGGCAGTTGAGTaGTTCCTGTTAGTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNCKAVE*FLLVFW
Trigger: CCAAAACACTAACAGGAACAACTCAACTGCCTTGCA...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCATATTTGTAACAAAATaGTCTGCCAACCGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFIFVTK*SANRSS
Trigger: GGAACTGCGGTTGGCAGACAATTTTGTTACAAATAT...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTCACAACAATTCACAATaGCAATGCAAGGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLHNNSQ*QCKGFP
Trigger: TGGAAACCCCTTGCATTGCAATTGTGAATTGTTGTG...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTTTGTGTTGCCCATTATaGTTGCAAACCTTATACCGG +
Preference number: 5 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLLCCPL*LQTLYR
Trigger: CCGGTATAAGGTTTGCAACAATAATGGGCAACACAA...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp AGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACATTGACTCAACTCATTaGTTCCTTTCTAGCTACCTG +
Preference number: 5 (lower is better)
Translates to: RDFHLGSCRQFLLRHQFNIDSTH*FLSSYL
Trigger: CAGGTAGCTAGAAAGGAACAAATGAGTTGAGTCAAT...GTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS TCA 90 bp TGCAAATGGGAGAAGGTCCCCTTAGGAATGTTATCAATCATATTGTaGTCCAAACTAAGGGTATGCAAGCTAACCATCTTCTCAACAGCA +
Preference number: 5 (lower is better)
Translates to: CKWEKVPLGMLSIIL*SKLRVCKLTIFSTA
Trigger: TGCTGTTGAGAAGATGGTTAGCTTGCATACCCTTAGTTTGGATCACAATATGATTGATAACATTCCTAAGGGGACCTTCTCCCATTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS TCA 90 bp AATGTCAAGTGTTCCGTTATCATACACCAGAGATCTTGTTGCATTTaGAATAAGCTTCCCTTCAGGAGAAATCCAGTGAATTGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NVKCSVIIHQRSCCI*NKLPFRRNPVNCRL
Trigger: GAGCCTGCAATTCACTGGATTTCTCCTGAAGGGAAGCTTATTTCAAATGCAACAAGATCTCTGGTGTATGATAACGGAACACTTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CCA 90 bp GTGTCAAAAGATGGGTGCTCGGCTGCTACATATCTTCTCAACACCTaGATGAATGGTTACAGGGATTCTTTACTGAGATCTTTATTTCTT +
Preference number: 5 (lower is better)
Translates to: VSKDGCSAATYLLNT*MNGYRDSLLRSLFL
Trigger: AAGAAATAAAGATCTCAGTAAAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCTTTTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555279.5
CDS-3UTR CAA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCATATTTGTAACAAAATaGTCTGCCAACCGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISIFVTK*SANRSS
Trigger: GGAACTGCGGTTGGCAGACAATTTTGTTACAAATAT...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp ATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCGCTCATGGATATGGTTaGTACTATTTAGTAAGTGAG +
Preference number: 5 (lower is better)
Translates to: IRDFHLGSCRQFLLRHQFAHGYG*YYLVSE
Trigger: CTCACTTACTAAATAGTACAAACCATATCCATGAGC...GAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTACCATTGTACTGGATTaGAAACATACGTATTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLTIVLD*KHTYSR
Trigger: CCTGGAATACGTATGTTTCAAATCCAGTACAATGGT...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS-3UTR CAA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATGTTCCTGTTAGTGTTTaGGGATTCAACATTTGTGAC +
Preference number: 5 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNVPVSV*GFNICD
Trigger: GTCACAAATGTTGAATCCCAAAACACTAACAGGAAC...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS-3UTR CAA 90 bp ACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCCTTCCAACTCTAATGTTATaGTATTTCCTTCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TLAPVDNFFYDTSSTISLPTLML*YFLQCS
Trigger: GGAGCACTGAAGGAAATACAATAACATTAGAGTTGG...AAGGCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp TCATCAGAGACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTAAGAAATTTCCTCTCTaGGTTATGATCTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: SSETFTLAPVDNFFYDTSKKFPL*VMIFLI
Trigger: GATGAGGAAGATCATAACCAAGAGAGGAAATTTCTT...ACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTCTCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp GACTTTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATGGCCTGACATCTTCTTaGTTTAAAGAGGTATTCTGT +
Preference number: 5 (lower is better)
Translates to: DFHLGSCRQFLLRHQFNNGLTSS*FKEVFC
Trigger: ACAGAATACCTCTTTAAACAAAGAAGATGTCAGGCC...ATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CCA 90 bp TTACAGGGATTCTTTTGGATATGTGAGGCATCTGCACCACCAATTTaGAATATCCTAATTCCTCTTCTTTGCCTAGCTAACTCCTTATCA +
Preference number: 5 (lower is better)
Translates to: LQGFFWICEASAPPI*NILIPLLCLANSLS
Trigger: TGATAAGGAGTTAGCTAGGCAAAGAAGAGGAATTAGGATATTCCAAATTGGTGGTGCAGATGCCTCACATATCCAAAAGAATCCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS-3UTR CAA 90 bp TTCACCTTGGCTCCTGTAGACAATTTCTTCTACGACACCAGTTCAACAATTAGCACCAAGCTGGTCATATaGGCAAAATCTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: FTLAPVDNFFYDTSSTISTKLVI*AKSFLL
Trigger: TAAAAGGAAAGATTTTGCCAATATGACCAGCTTGGT...GCTAATTGTTGAACTGGTGTCGTAGAAGAAATTGTCTACAGGAGCCAAGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS GCA 90 bp AGCTTCTGCAATTTATTTGATGTCACATCTAACCGAGTCATCTTGTaGAAATGGGAGAAGGTCCCCTTAGGAATGTTATCAATCATATTG +
Preference number: 5 (lower is better)
Translates to: SFCNLFDVTSNRVIL*KWEKVPLGMLSIIL
Trigger: CAATATGATTGATAACATTCCTAAGGGGACCTTCTCCCATTTGCACAAGATGACTCGGTTAGATGTGACATCAAATAAATTGCAGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS GCA 90 bp CTGCATGGTTTACTTCCAACTCTAATGTTATTGTATTTCCTTCAGTaGTCCCTGAATACCTACACTTTCAAATGTTCTGTTGATGATATC +
Preference number: 5 (lower is better)
Translates to: LHGLLPTLMLLYFLQ*SLNTYTFKCSVDDI
Trigger: GATATCATCAACAGAACATTTGAAAGTGTAGGTATTCAGGGAGCACTGAAGGAAATACAATAACATTAGAGTTGGAAGTAAACCATGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS GCA 90 bp GAGGCATCTGCACCACCAATTTGGAATATCCTAATTCCTCTTCTTTaGCTAGCTAACTCCTTATCATGTAAATTTAGCTCAAATATCTTT +
Preference number: 5 (lower is better)
Translates to: EASAPPIWNILIPLL*LANSLSCKFSSNIF
Trigger: AAAGATATTTGAGCTAAATTTACATGATAAGGAGTTAGCTAGGCAAAGAAGAGGAATTAGGATATTCCAAATTGGTGGTGCAGATGCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS GCA 90 bp TGTCCCAAGAGAGACTTTATCACACAAATTATCTTTTGTAACATCTaGCCAATAAGTTCACTATATATTTTTGGTCTGAGCTCTAGCAGT +
Preference number: 5 (lower is better)
Translates to: CPKRDFITQIIFCNI*PISSLYIFGLSSSS
Trigger: ACTGCTAGAGCTCAGACCAAAAATATATAGTGAACTTATTGGGCAGATGTTACAAAAGATAATTTGTGTGATAAAGTCTCTCTTGGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CCA 72 bp CTCCCTGCGCGCCGCGGAACACAGCGCCCCGCCCGCTaGCCACCGCGCTGGGGCGAGTCCGCAGTTCAGGCG +
Preference number: 6 (lower is better)
Translates to: LPARRGTQRPAR*PPRWGESAVQA
Trigger: CGCCTGAACTGCGGACTCGCCCCAGCGCGGTGGCCAGCGGGCGGGGCGCTGTGTTCCGCGGCGCGCAGGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 72 bp CCGTTCGGGCAGCTCTGCACACGCTCACCGCCTCCCTaGGCGCCGCGGAACACAGCGCCCCGCCCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PFGQLCTRSPPP*APRNTAPRPLA
Trigger: GGCCAGCGGGCGGGGCGCTGTGTTCCGCGGCGCGCAGGGAGGCGGTGAGCGTGTGCAGAGCTGCCCGAACGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp CGCGGAACACAGCGCCCCGCCCGCTGGCCACCGCGCTaGGGCGAGTCCGCAGTTCAGGCGCGAGGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: RGTQRPARWPPR*GESAVQARGKQ
Trigger: CTGCTTGCCTCGCGCCTGAACTGCGGACTCGCCCCAGCGCGGTGGCCAGCGGGCGGGGCGCTGTGTTCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 72 bp CCGCTGCCCGCAGGTCGCTCTGGGTGGGGGAATCGCTaGAATCGCCCCATGAAACCCGCGGCTCCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: PLPAGRSGWGNR*NRPMKPAAPRP
Trigger: CGGGCGCGGAGCCGCGGGTTTCATGGGGCGATTGCAGCGATTCCCCCACCCAGAGCGACCTGCGGGCAGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000555279.5
CDS CCA 72 bp CGGACCCGGGAGCTGGGCTTCCCAAAGCGTCGCGTGTaGGCAACGGCGGCCTCCTGGCCGCGTGGAACTGAG +
Preference number: 6 (lower is better)
Translates to: RTRELGFPKRRV*ATAASWPRGTE
Trigger: CTCAGTTCCACGCGGCCAGGAGGCCGCCGTTGCCCACACGCGACGCTTTGGGAAGCCCAGCTCCCGGGTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 72 bp CGCATCGTAGGGAATCGGAAAGGCGGCTCCTGCCACTaGCGCCGCTGCCCGCAGGTCGCTCTGGGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: RIVGNRKGGSCH*RRCPQVALGGG
Trigger: TCCCCCACCCAGAGCGACCTGCGGGCAGCGGCGGCAGTGGCAGGAGCCGCCTTTCCGATTCCCTACGATGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000555279.5
CDS GCA 72 bp AGCACCCGCATCGTAGGGAATCGGAAAGGCGGCTCCTaGCACTGCCGCCGCTGCCCGCAGGTCGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: STRIVGNRKGGS*HCRRCPQVALG
Trigger: ACCCAGAGCGACCTGCGGGCAGCGGCGGCAGTGGCAGGAGCCGCCTTTCCGATTCCCTACGATGCGGGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298119.9
ENST00000555279.5
CDS GCA 72 bp CGCACACACATACATAGTCCTCCGTTCGGGCAGCTCTaGACACGCTCACCGCCTCCCTGCGCGCCGCGGAAC +
Preference number: 6 (lower is better)
Translates to: RTHIHSPPFGQL*TRSPPPCAPRN
Trigger: GTTCCGCGGCGCGCAGGGAGGCGGTGAGCGTGTGCAGAGCTGCCCGAACGGAGGACTATGTATGTGTGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp TGCACGGGGAGGAAGCAGCACGGAGGGAACCGGTCCTTCTCACGATaGGCTTCGAAGCCCACCGGACCGCGGGCAGCAAAGAGAGCGTTC +
Preference number: 6 (lower is better)
Translates to: CTGRKQHGGNRSFSR*ASKPTGPRAAKRAF
Trigger: GAACGCTCTCTTTGCTGCCCGCGGTCCGGTGGGCTTCGAAGCCAATCGTGAGAAGGACCGGTTCCCTCCGTGCTGCTTCCTCCCCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp GGAAGCAGCACGGAGGGAACCGGTCCTTCTCACGATTaGCTTCGAAGCCCACCGGACCGCGGGCAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: GSSTEGTGPSHD*LRSPPDRGQQR
Trigger: TCTTTGCTGCCCGCGGTCCGGTGGGCTTCGAAGCCAATCGTGAGAAGGACCGGTTCCCTCCGTGCTGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp AGGAAGCAGCACGGAGGGAACCGGTCCTTCTCACGATaGGCTTCGAAGCCCACCGGACCGCGGGCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: RKQHGGNRSFSR*ASKPTGPRAAK
Trigger: CTTTGCTGCCCGCGGTCCGGTGGGCTTCGAAGCCAATCGTGAGAAGGACCGGTTCCCTCCGTGCTGCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp TGCCTGCAGGTACAATCCCGGCAAGGTGGCTCCAGGTaGCTTTCACAGTCGTACGCGGGTCTCGCTCGTCAC +
Preference number: 6 (lower is better)
Translates to: CLQVQSRQGGSR*LSQSYAGLARH
Trigger: GTGACGAGCGAGACCCGCGTACGACTGTGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000553926.1
ENST00000554120.5
ENST00000555279.5
CDS CCA 72 bp CAGCAGCCGCTCCAAATCCAGCCAGGAAAATGGGTCTaGGCGTCCTCAGAGCTCTGCAAGAACCCGGGCATG +
Preference number: 6 (lower is better)
Translates to: QQPLQIQPGKWV*ASSELCKNPGM
Trigger: CATGCCCGGGTTCTTGCAGAGCTCTGAGGACGCCCAGACCCATTTTCCTGGCTGGATTTGGAGCGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp ACAGCCCAGCAGCCGCTCCAAATCCAGCCAGGAAAATaGGTCTGGGCGTCCTCAGAGCTCTGCAAGAACCCG +
Preference number: 6 (lower is better)
Translates to: TAQQPLQIQPGK*VWASSELCKNP
Trigger: CGGGTTCTTGCAGAGCTCTGAGGACGCCCAGACCCATTTTCCTGGCTGGATTTGGAGCGGCTGCTGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS TCA 72 bp AAGAGCTTCTGGAGCCTGAAGAGTTCCTCACGGCTGTaGAGGAGTCGGCACTCTGCCTGGCTGCTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: KSFWSLKSSSRL*RSRHSAWLLQK
Trigger: CTTCTGCAGCAGCCAGGCAGAGTGCCGACTCCTTCACAGCCGTGAGGAACTCTTCAGGCTCCAGAAGCTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CCA 72 bp GAAGACTTTCTGCCTGCAGGTACAATCCCGGCAAGGTaGCTCCAGGTGGCTTTCACAGTCGTACGCGGGTCT +
Preference number: 6 (lower is better)
Translates to: EDFLPAGTIPAR*LQVAFTVVRGS
Trigger: AGACCCGCGTACGACTGTGAAAGCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000553926.1
ENST00000554120.5
ENST00000555279.5
CDS TCA 72 bp TCTGGGCGTCCTCAGAGCTCTGCAAGAACCCGGGCATaGAGGGGCATCGCCGAGTTAACACATTTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SGRPQSSARTRA*RGIAELTHLLL
Trigger: CAGAAGCAAATGTGTTAACTCGGCGATGCCCCTTCATGCCCGGGTTCTTGCAGAGCTCTGAGGACGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 72 bp CTAAGGGAAAAGACGGTCGTAGGAAGACTTTCTGCCTaGAGGTACAATCCCGGCAAGGTGGCTCCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: LREKTVVGRLSA*RYNPGKVAPGG
Trigger: GCCACCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACGACCGTCTTTTCCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000553926.1
ENST00000554120.5
ENST00000555279.5
CDS GCA 72 bp GCCTCTAAGGGAAAAGACGGTCGTAGGAAGACTTTCTaGCTGCAGGTACAATCCCGGCAAGGTGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ASKGKDGRRKTF*LQVQSRQGGSR
Trigger: CCTGGAGCCACCTTGCCGGGATTGTACCTGCAGGCAGAAAGTCTTCCTACGACCGTCTTTTCCCTTAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000553926.1
ENST00000554120.5
ENST00000555279.5
CDS CCA 72 bp CGTACACACGCGCGCGCACACACACACGCAGCTAGCTaGAAAGCGGCTTACAAAACACTAGAGACATGCCAA +
Preference number: 6 (lower is better)
Translates to: RTHARAHTHAAS*KAAYKTLETCQ
Trigger: TTGGCATGTCTCTAGTGTTTTGTAAGCCGCTTTCCAGCTAGCTGCGTGTGTGTGTGCGCGCGCGTGTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp CAACACTGGGCATTCTCTTCGTGTCCCACAGCTTGTTaGGACACGGACTGGGGCAGCGTTACACTACAGCCT +
Preference number: 6 (lower is better)
Translates to: QHWAFSSCPTAC*DTDWGSVTLQP
Trigger: AGGCTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACAAGCTGTGGGACACGAAGAGAATGCCCAGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp ACCCGAATCCACGTAATTCAAGAGCTGGTGACATTTTaGTGGGGAGGAGGGAGCCGAGAAAGGGCTGAGGAA +
Preference number: 6 (lower is better)
Translates to: TRIHVIQELVTF*WGGGSRERAEE
Trigger: TTCCTCAGCCCTTTCTCGGCTCCCTCCTCCCCACCAAAATGTCACCAGCTCTTGAATTACGTGGATTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp AACACTGGGCATTCTCTTCGTGTCCCACAGCTTGTTTaGACACGGACTGGGGCAGCGTTACACTACAGCCTT +
Preference number: 6 (lower is better)
Translates to: NTGHSLRVPQLV*TRTGAALHYSL
Trigger: AAGGCTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACAAGCTGTGGGACACGAAGAGAATGCCCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp GGCATGAAGGGGCATCGCCGAGTTAACACATTTGCTTCTGGGCAGTaGGATAAAAGACAGTCAAATGCATCAGATAGGCGCGCGCGTACA +
Preference number: 6 (lower is better)
Translates to: GMKGHRRVNTFASGQ*DKRQSNASDRRART
Trigger: TGTACGCGCGCGCCTATCTGATGCATTTGACTGTCTTTTATCCAACTGCCCAGAAGCAAATGTGTTAACTCGGCGATGCCCCTTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp ACTGGTAGCTTTACAACACTGGGCATTCTCTTCGTGTCCCACAGCTaGTTTGGACACGGACTGGGGCAGCGTTACACTACAGCCTTGTAT +
Preference number: 6 (lower is better)
Translates to: TGSFTTLGILFVSHS*FGHGLGQRYTTALY
Trigger: ATACAAGGCTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACAAGCTGTGGGACACGAAGAGAATGCCCAGTGTTGTAAAGCTACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp TTTACAACACTGGGCATTCTCTTCGTGTCCCACAGCTaGTTTGGACACGGACTGGGGCAGCGTTACACTACA +
Preference number: 6 (lower is better)
Translates to: FTTLGILFVSHS*FGHGLGQRYTT
Trigger: TGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACAAGCTGTGGGACACGAAGAGAATGCCCAGTGTTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS TCA 72 bp GCCCTTTGTCCCTCCAGGACTCTCATCTCATGTGTATaGCGAGTAATGAGAGGAGGCTCACACAAAAACTCT +
Preference number: 6 (lower is better)
Translates to: ALCPSRTLISCV*RVMRGGSHKNS
Trigger: AGAGTTTTTGTGTGAGCCTCCTCTCATTACTCGTCATACACATGAGATGAGAGTCCTGGAGGGACAAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CCA 72 bp GGCATCGCCGAGTTAACACATTTGCTTCTGGGCAGTTaGATAAAAGACAGTCAAATGCATCAGATAGGCGCG +
Preference number: 6 (lower is better)
Translates to: GIAELTHLLLGS*IKDSQMHQIGA
Trigger: CGCGCCTATCTGATGCATTTGACTGTCTTTTATCCAACTGCCCAGAAGCAAATGTGTTAACTCGGCGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp TCTCCAAAGCTGATTTCAGAGGACGGTGTCAAAAGATaGGTGCTCGGCTGCTACATATCTTCTCAACACCTG +
Preference number: 6 (lower is better)
Translates to: SPKLISEDGVKR*VLGCYISSQHL
Trigger: CAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCTTTTGACACCGTCCTCTGAAATCAGCTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
ENST00000555279.5
CDS CAA 72 bp GGGCATCGCCGAGTTAACACATTTGCTTCTGGGCAGTaGGATAAAAGACAGTCAAATGCATCAGATAGGCGC +
Preference number: 6 (lower is better)
Translates to: GHRRVNTFASGQ*DKRQSNASDRR
Trigger: GCGCCTATCTGATGCATTTGACTGTCTTTTATCCAACTGCCCAGAAGCAAATGTGTTAACTCGGCGATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp CACGGACTGGGGCAGCGTTACACTACAGCCTTGTATTaGAGCCCCGTTAGTTTGGGAATAAACATTGCTAAC +
Preference number: 6 (lower is better)
Translates to: HGLGQRYTTALY*SPVSLGINIAN
Trigger: GTTAGCAATGTTTATTCCCAAACTAACGGGGCTCAAATACAAGGCTGTAGTGTAACGCTGCCCCAGTCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp CTGGGGCAGCGTTACACTACAGCCTTGTATTTGAGCCCCGTTAGTTaGGGAATAAACATTGCTAACCTTGGTGACCTTGTGTTGCCCATT +
Preference number: 6 (lower is better)
Translates to: LGQRYTTALYLSPVS*GINIANLGDLVLPI
Trigger: AATGGGCAACACAAGGTCACCAAGGTTAGCAATGTTTATTCCCAAACTAACGGGGCTCAAATACAAGGCTGTAGTGTAACGCTGCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp TTGTTTGGACACGGACTGGGGCAGCGTTACACTACAGCCTTGTATTaGAGCCCCGTTAGTTTGGGAATAAACATTGCTAACCTTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LFGHGLGQRYTTALY*SPVSLGINIANLGD
Trigger: GTCACCAAGGTTAGCAATGTTTATTCCCAAACTAACGGGGCTCAAATACAAGGCTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp CACAGCTTGTTTGGACACGGACTGGGGCAGCGTTACACTACAGCCTaGTATTTGAGCCCCGTTAGTTTGGGAATAAACATTGCTAACCTT +
Preference number: 6 (lower is better)
Translates to: HSLFGHGLGQRYTTA*YLSPVSLGINIANL
Trigger: AAGGTTAGCAATGTTTATTCCCAAACTAACGGGGCTCAAATACAAGGCTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAACAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp GTGACAGAATCGGGAGGACGGCTAGCTAACTGCAAGGCAGTTGAGTaGTTCCTGTTAGTGTTTTGGGATTCAACATTTGTGACGGCTTCA +
Preference number: 6 (lower is better)
Translates to: VTESGGRLANCKAVE*FLLVFWDSTFVTAS
Trigger: TGAAGCCGTCACAAATGTTGAATCCCAAAACACTAACAGGAACAACTCAACTGCCTTGCAGTTAGCTAGCCGTCCTCCCGATTCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp TTTGGACACGGACTGGGGCAGCGTTACACTACAGCCTaGTATTTGAGCCCCGTTAGTTTGGGAATAAACATT +
Preference number: 6 (lower is better)
Translates to: FGHGLGQRYTTA*YLSPVSLGINI
Trigger: AATGTTTATTCCCAAACTAACGGGGCTCAAATACAAGGCTGTAGTGTAACGCTGCCCCAGTCCGTGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 72 bp ATTTCAGAGGACGGTGTCAAAAGATGGGTGCTCGGCTaGTACATATCTTCTCAACACCTGGATGAATGGTTA +
Preference number: 6 (lower is better)
Translates to: ISEDGVKRWVLG*YISSQHLDEWL
Trigger: TAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATCTTTTGACACCGTCCTCTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
ENST00000555279.5
CDS CCA 72 bp GATGGGTGCTCGGCTGCTACATATCTTCTCAACACCTaGATGAATGGTTACAGGGATTCTTTTGGATATGTG +
Preference number: 6 (lower is better)
Translates to: DGCSAATYLLNT*MNGYRDSFGYV
Trigger: CACATATCCAAAAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CCA 72 bp GATGGGTGCTCGGCTGCTACATATCTTCTCAACACCTaGATGAATGGTTACAGGGATTCTTTACTGAGATCT +
Preference number: 6 (lower is better)
Translates to: DGCSAATYLLNT*MNGYRDSLLRS
Trigger: AGATCTCAGTAAAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAGCACCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555279.5
CDS CAA 72 bp GGGAGCCGAGAAAGGGCTGAGGAAGAGTCGGGGATTTaGTTAAGCAGTTTAATAAGCAATCCTCATTACCTT +
Preference number: 6 (lower is better)
Translates to: GSRERAEEESGI*LSSLISNPHYL
Trigger: AAGGTAATGAGGATTGCTTATTAAACTGCTTAACAAAATCCCCGACTCTTCCTCAGCCCTTTCTCGGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 90 bp TGGGGAGGAGGGAGCCGAGAAAGGGCTGAGGAAGAGTCGGGGATTTaGTTAAGCAGTTTAATAAGCAATCCTCATTACCTTATTTGTTTT +
Preference number: 6 (lower is better)
Translates to: WGGGSRERAEEESGI*LSSLISNPHYLICF
Trigger: AAAACAAATAAGGTAATGAGGATTGCTTATTAAACTGCTTAACAAAATCCCCGACTCTTCCTCAGCCCTTTCTCGGCTCCCTCCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS GCA 72 bp CTCTGGACAGACGCCTCAACCACAACAATTCACAATTaGAATGCAAGGGGTTTCCACCAAAACTTAATGCAA +
Preference number: 6 (lower is better)
Translates to: LWTDASTTTIHN*NARGFHQNLMQ
Trigger: TTGCATTAAGTTTTGGTGGAAACCCCTTGCATTGCAATTGTGAATTGTTGTGGTTGAGGCGTCTGTCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CCA 72 bp CTCGGCTGCTACATATCTTCTCAACACCTGGATGAATaGTTACAGGGATTCTTTTGGATATGTGAGGCATCT +
Preference number: 6 (lower is better)
Translates to: LGCYISSQHLDE*LQGFFWICEAS
Trigger: AGATGCCTCACATATCCAAAAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CAA 72 bp TCTCTGGACAGACGCCTCAACCACAACAATTCACAATaGCAATGCAAGGGGTTTCCACCAAAACTTAATGCA +
Preference number: 6 (lower is better)
Translates to: SLDRRLNHNNSQ*QCKGFPPKLNA
Trigger: TGCATTAAGTTTTGGTGGAAACCCCTTGCATTGCAATTGTGAATTGTTGTGGTTGAGGCGTCTGTCCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS TCA 72 bp GGTAGTGGTAGAGGAGTCCTGACTCGAACAAGTTTCTaGAGATTGAATCACATTGTCACTGGTAGCTTTACA +
Preference number: 6 (lower is better)
Translates to: GSGRGVLTRTSF*RLNHIVTGSFT
Trigger: TGTAAAGCTACCAGTGACAATGTGATTCAATCTTCAGAAACTTGTTCGAGTCAGGACTCCTCTACCACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CCA 72 bp CCCCTCCATAATTATGTTCTGTGCTATTACCAACAGTaGTCACAAGTCCCTCACTACACAAAATCACCTACT +
Preference number: 6 (lower is better)
Translates to: PLHNYVLCYYQQ*SQVPHYTKSPT
Trigger: AGTAGGTGATTTTGTGTAGTGAGGGACTTGTGACCACTGTTGGTAATAGCACAGAACATAATTATGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS TCA 72 bp GTAAAGTGGAGTCAGTTCCTGATTAGTGTCTGGGGTTaGCTCAATAACTCTATCTCCTGTAACAATCTCTTC +
Preference number: 6 (lower is better)
Translates to: VKWSQFLISVWG*LNNSISCNNLF
Trigger: GAAGAGATTGTTACAGGAGATAGAGTTATTGAGTCAACCCCAGACACTAATCAGGAACTGACTCCACTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS GCA 72 bp AGGGAGCTTAATTATATGAAGATCCACTATTTGTGTTaGTTCCCCAGCAGGATTGGAAGCAATGCAGGTAAA +
Preference number: 6 (lower is better)
Translates to: RELNYMKIHYLC*FPSRIGSNAGK
Trigger: TTTACCTGCATTGCTTCCAATCCTGCTGGGGAAGCAACACAAATAGTGGATCTTCATATAATTAAGCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CAA 90 bp AGCCATCATCTTTACTGTTACCAAGAACAAGGGAGGTTAACTACCTaGCATTCTAGTCCCAACCATTATCTAAGAGATAGCTGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: SHHLYCYQEQGRLTT*HSSPNHYLRDSCFW
Trigger: CCAGAAACAGCTATCTCTTAGATAATGGTTGGGACTAGAATGCAAGGTAGTTAACCTCCCTTGTTCTTGGTAACAGTAAAGATGATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS CAA 90 bp GGTAGCTTCTGCAATTTATTTGATGTCACATCTAACCGAGTCATCTaGTGCAAATGGGAGAAGGTCCCCTTAGGAATGTTATCAATCATA +
Preference number: 6 (lower is better)
Translates to: GSFCNLFDVTSNRVI*CKWEKVPLGMLSII
Trigger: TATGATTGATAACATTCCTAAGGGGACCTTCTCCCATTTGCACAAGATGACTCGGTTAGATGTGACATCAAATAAATTGCAGAAGCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CAA 90 bp CCCGTTAGTTTGGGAATAAACATTGCTAACCTTGGTGACCTTGTGTaGCCCATTATTGTTGCAAACCTTATACCGGATCATCAGAATAAT +
Preference number: 6 (lower is better)
Translates to: PVSLGINIANLGDLV*PIIVANLIPDHQNN
Trigger: ATTATTCTGATGATCCGGTATAAGGTTTGCAACAATAATGGGCAACACAAGGTCACCAAGGTTAGCAATGTTTATTCCCAAACTAACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS TCA 72 bp GAGAAGGTCCCCTTAGGAATGTTATCAATCATATTGTaGTCCAAACTAAGGGTATGCAAGCTAACCATCTTC +
Preference number: 6 (lower is better)
Translates to: EKVPLGMLSIIL*SKLRVCKLTIF
Trigger: GAAGATGGTTAGCTTGCATACCCTTAGTTTGGATCACAATATGATTGATAACATTCCTAAGGGGACCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CCA 72 bp CTCGGCTGCTACATATCTTCTCAACACCTGGATGAATaGTTACAGGGATTCTTTACTGAGATCTTTATTTCT +
Preference number: 6 (lower is better)
Translates to: LGCYISSQHLDE*LQGFFTEIFIS
Trigger: AGAAATAAAGATCTCAGTAAAGAATCCCTGTAACCATTCATCCAGGTGTTGAGAAGATATGTAGCAGCCGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555279.5
CDS CAA 72 bp ACACACAAGTCATACATAGTTCCAGCAGCCAGATTATaGACCAGAAAAGTTTTGCTCGTAGGAGGTATCATT +
Preference number: 6 (lower is better)
Translates to: THKSYIVPAARL*TRKVLLVGGII
Trigger: AATGATACCTCCTACGAGCAAAACTTTTCTGGTCAATAATCTGGCTGCTGGAACTATGTATGACTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp TTGCTAACCTTGGTGACCTTGTGTTGCCCATTATTGTaGCAAACCTTATACCGGATCATCAGAATAATGATG +
Preference number: 6 (lower is better)
Translates to: LLTLVTLCCPLL*QTLYRIIRIMM
Trigger: CATCATTATTCTGATGATCCGGTATAAGGTTTGCAACAATAATGGGCAACACAAGGTCACCAAGGTTAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp ACATTGCTAACCTTGGTGACCTTGTGTTGCCCATTATaGTTGCAAACCTTATACCGGATCATCAGAATAATG +
Preference number: 6 (lower is better)
Translates to: TLLTLVTLCCPL*LQTLYRIIRIM
Trigger: CATTATTCTGATGATCCGGTATAAGGTTTGCAACAATAATGGGCAACACAAGGTCACCAAGGTTAGCAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp CTTTACTGTTACCAAGAACAAGGGAGGTTAACTACCTaGCATTCTAGTCCCAACCATTATCTAAGAGATAGC +
Preference number: 6 (lower is better)
Translates to: LYCYQEQGRLTT*HSSPNHYLRDS
Trigger: GCTATCTCTTAGATAATGGTTGGGACTAGAATGCAAGGTAGTTAACCTCCCTTGTTCTTGGTAACAGTAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554171.1
CDS GCA 72 bp AATTTATTTGATGTCACATCTAACCGAGTCATCTTGTaGAAATGGGAGAAGGTCCCCTTAGGAATGTTATCA +
Preference number: 6 (lower is better)
Translates to: NLFDVTSNRVIL*KWEKVPLGMLS
Trigger: TGATAACATTCCTAAGGGGACCTTCTCCCATTTGCACAAGATGACTCGGTTAGATGTGACATCAAATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298119.9
ENST00000554120.5
ENST00000554171.1
CDS CAA 72 bp GTTTTGTATAGCAAACCAGTTCGAAGGGCTGAACTTTaGGCTTCAAATGCTGTGAACCAAAACGTAAATATC +
Preference number: 6 (lower is better)
Translates to: VLYSKPVRRAEL*ASNAVNQNVNI
Trigger: GATATTTACGTTTTGGTTCACAGCATTTGAAGCCAAAAGTTCAGCCCTTCGAACTGGTTTGCTATACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298119.9
CDS CAA 72 bp GAGATGAAAAACCCCTGTCCTTACAGAGCTAACATTTaGGAGGGAGCATTAAAGCCAAACATTAATTTACCT +
Preference number: 6 (lower is better)
Translates to: EMKNPCPYRANI*EGALKPNINLP
Trigger: AGGTAAATTAATGTTTGGCTTTAATGCTCCCTCCAAAATGTTAGCTCTGTAAGGACAGGGGTTTTTCATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554171.1