RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRCH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000186001

Ensembl transcript IDs: ENST00000334859.8, ENST00000414675.6, ENST00000425562.7, ENST00000428136.2, ENST00000433298.5, ENST00000438796.6, ENST00000441090.6, ENST00000443727.1, ENST00000452660.5, ENST00000461674.5, ENST00000466845.1, ENST00000481048.5, ENST00000483442.5, ENST00000493726.1, ENST00000494069.1

Found 879 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGTGCCCACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGGGCAAGTTCCAGGAGAGCCTGGACC +
Preference number: 1 (lower is better)
Translates to: ASAHRPGDPQTADNW*CCCLGGASSRRAWT
Trigger: GGTCCAGGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR CCA 90 bp CAGGCCAGTGCCCACCGTCCTGGGGATCCTCAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGTGGGGCAAGTTCCAGGAGAGCCTGG +
Preference number: 1 (lower is better)
Translates to: QASAHRPGDPQTADN*CCCCLGGASSRRAW
Trigger: CCAGGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR GCA 90 bp AGTGCCCACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCAAGTTCCAGGAGAGCCTGGACCGTC +
Preference number: 1 (lower is better)
Translates to: SAHRPGDPQTADNWC*CCLGGASSRRAWTV
Trigger: GACGGTCCAGGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR CCA 90 bp GTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGAGAGCCTGGACCGTCACTGCAACCT +
Preference number: 1 (lower is better)
Translates to: VLGILKQQITGAAVA*VGQVPGEPGPSLQP
Trigger: AGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR TCA 90 bp AACCGGGTGCGGCCAAAACCAGAAAAGGCACGACGGTTCTCCTCGTaGGCAGCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTT +
Preference number: 1 (lower is better)
Translates to: NRVRPKPEKARRFSS*AAAAKVQSLHNSTL
Trigger: AAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCGTGCCTTTTCTGGTTTTGGCCGCACCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 90 bp CCGCAAACATACAAATATCTAGCTTTGAACAGTGGTTCCACTACATaGAAAACACGTGCAATGGGCCGGGCGCCGGGCGCAGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: PQTYKYLALNSGSTT*KTRAMGRAPGAVAH
Trigger: GTGAGCCACTGCGCCCGGCGCCCGGCCCATTGCACGTGTTTTTCATGTAGTGGAACCACTGTTCAAAGCTAGATATTTGTATGTTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR GCA 90 bp GCGGCCAAAACCAGAAAAGGCACGACGGTTCTCCTCGTGAGCAGCTaGTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: AAKTRKGTTVLLVSS*CKGSVTPQFNTCAE
Trigger: CTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCGTGCCTTTTCTGGTTTTGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 90 bp GCCAAAACCAGAAAAGGCACGACGGTTCTCCTCGTGAGCAGCTGCTaGAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCA +
Preference number: 1 (lower is better)
Translates to: AKTRKGTTVLLVSSC*KGSVTPQFNTCAEA
Trigger: TGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCGTGCCTTTTCTGGTTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CCA 90 bp AGCTCCAGCCCATCTGCTCGTGTGCAGCACATACAGCGTATAGACTaGGCTCAGAAGAGCAGTCTAGGGAATGTGGGTGATCTTCAAACT +
Preference number: 1 (lower is better)
Translates to: SSSPSARVQHIQRID*AQKSSLGNVGDLQT
Trigger: AGTTTGAAGATCACCCACATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACGAGCAGATGGGCTGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 90 bp GGAGTGCTAAACACAGATTATGAGTCTGAAATACTGGGAAACTGCTaGCAGAAAATCTCTGTACGTGGCAAGGGCTCTGCTGGGGGTGGC +
Preference number: 1 (lower is better)
Translates to: GVLNTDYESEILGNC*QKISVRGKGSAGGG
Trigger: GCCACCCCCAGCAGAGCCCTTGCCACGTACAGAGATTTTCTGTCAGCAGTTTCCCAGTATTTCAGACTCATAATCTGTGTTTAGCACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR GCA 90 bp GGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGATGTaGTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAG +
Preference number: 1 (lower is better)
Translates to: GKNNGTACLCLTQKM*FLARETRLLSRKTQ
Trigger: CTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CCA 90 bp ATTATGGCCAATACCTTTGAAACGTCCAGACCGCAAATGCTTATATaGACCTGTGCCTACCGACAAAGCGGGGATTCAGGATCTCAGGAC +
Preference number: 1 (lower is better)
Translates to: IMANTFETSRPQMLI*TCAYRQSGDSGSQD
Trigger: GTCCTGAGATCCTGAATCCCCGCTTTGTCGGTAGGCACAGGTCCATATAAGCATTTGCGGTCTGGACGTTTCAAAGGTATTGGCCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 90 bp TCCCATTTCATATGGAAGAAAACCAAACCAGTGAGCCCCTCAGGCTaGATTCTACACCCAGATGTTATGCTCCTCCCTCAGGCTGAATTC +
Preference number: 1 (lower is better)
Translates to: SHFIWKKTKPVSPSG*ILHPDVMLLPQAEF
Trigger: GAATTCAGCCTGAGGGAGGAGCATAACATCTGGGTGTAGAATTCAGCCTGAGGGGCTCACTGGTTTGGTTTTCTTCCATATGAAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CCA 90 bp TACTATGCTCTGTGTTCTAGCAGAATACAAAGGCCCCTCTTTCCATaGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAGTGC +
Preference number: 1 (lower is better)
Translates to: YYALCSSRIQRPLFP*VVSRPGYYKRTLEC
Trigger: GCACTCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGCCTTTGTATTCTGCTAGAACACAGAGCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR TCA 90 bp CTAAGTGCTACGCATTCTGAAAGAGCTAGACAATATTCACTGCCTTaGGCACAGAACAGGGACTGCTGCCCTAATACTTCTCCTGCTACT +
Preference number: 1 (lower is better)
Translates to: LSATHSERARQYSLP*AQNRDCCPNTSPAT
Trigger: AGTAGCAGGAGAAGTATTAGGGCAGCAGTCCCTGTTCTGTGCTCAAGGCAGTGAATATTGTCTAGCTCTTTCAGAATGCGTAGCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 90 bp AGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATaGTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACA +
Preference number: 1 (lower is better)
Translates to: SRPVVLRPGKNNGTA*LCLTQKMCFLARET
Trigger: TGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR TCA 90 bp CTCAGGCTGAATTCTACACCCAGATGTTATGCTCCTCCCTCAGGCTaGATTCTAAACCGGATATTATGCTCCTCACAATCTCTCTTCACA +
Preference number: 1 (lower is better)
Translates to: LRLNSTPRCYAPPSG*ILNRILCSSQSLFT
Trigger: TGTGAAGAGAGATTGTGAGGAGCATAATATCCGGTTTAGAATTCAGCCTGAGGGAGGAGCATAACATCTGGGTGTAGAATTCAGCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CCA 90 bp GCTTCAGGTCAGGGGAGCTGTGACAAGGTCATCTTCATCTTACACTaGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTTTCCAA +
Preference number: 1 (lower is better)
Translates to: ASGQGSCDKVIFILH*SQAKLNVKPNCAFQ
Trigger: TTGGAAAGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGATGACCTTGTCACAGCTCCCCTGACCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR GCA 90 bp TTATTAAAATTATGGCCAATACCTTTGAAACGTCCAGACCGCAAATaGTTATATGGACCTGTGCCTACCGACAAAGCGGGGATTCAGGAT +
Preference number: 1 (lower is better)
Translates to: LLKLWPIPLKRPDRK*LYGPVPTDKAGIQD
Trigger: ATCCTGAATCCCCGCTTTGTCGGTAGGCACAGGTCCATATAAGCATTTGCGGTCTGGACGTTTCAAAGGTATTGGCCATAATTTTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 90 bp CAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACACTGTTTaGTTGAGGAAGTTAAACGCTTCCTTAATGTGTGCATCGTTAATT +
Preference number: 1 (lower is better)
Translates to: QEHVDYQHVRSVDTV*LRKLNASLMCASLI
Trigger: AATTAACGATGCACACATTAAGGAAGCGTTTAACTTCCTCAAGCAAACAGTGTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 90 bp AGCATATATCTATACATACAACAGAGGGAAAACAATACCGCAGGGTaGAAGCAACATCCTTTATCCCTGATGAATAAAAGGTCAATACAG +
Preference number: 1 (lower is better)
Translates to: SIYLYIQQRENNTAG*KQHPLSLMNKRSIQ
Trigger: CTGTATTGACCTTTTATTCATCAGGGATAAAGGATGTTGCTTTCACCCTGCGGTATTGTTTTCCCTCTGTTGTATGTATAGATATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 90 bp GTGTATAGAGGGCTTGTTGTTTATTATAATGTCCAGATAACAGGATaGCATAGAACTATCTTCTATGATGGTATGACTGCAGTTGAAGGG +
Preference number: 1 (lower is better)
Translates to: VYRGLVVYYNVQITG*HRTIFYDGMTAVEG
Trigger: CCCTTCAACTGCAGTCATACCATCATAGAAGATAGTTCTATGTCATCCTGTTATCTGGACATTATAATAAACAACAAGCCCTCTATACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CAA 90 bp AAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACCGTCCTGGGGATCCTCAAACAGCAG +
Preference number: 2 (lower is better)
Translates to: KQTAGSSNHGVLFLV*ARPVPTVLGILKQQ
Trigger: CTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR CAA 90 bp TGTTTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: CLSRQLAAAITVSCS*FWPGQCPPSWGSSN
Trigger: GTTTGAGGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR TCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCAGGCAGGTGGATCACTTaGAGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: QPTATFGFQVEAILVPQPGRWIT*SQEFET
Trigger: GGTCTCAAACTCCTGACTTCAAGTGATCCACCTGCC...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LCLTQKMCFLARETRLLSGAAVA*VGQVPG
Trigger: TCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACC...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR TCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAAGGCGGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGRRRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCCGCCT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCACCATGTTGGCCAGGCTaGCTTGCGTATGTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: QPTATFGFQVEAILVPQPPCWPG*LAYVKN
Trigger: GTTTTTAACATACGCAAGCCAGCCTGGCCAACATGG...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCACAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: QPTATFGFQVEAILVPQPQTADN*CCCCLG
Trigger: ACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTG...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATACCAAGCACAGGAATaGGGCAGAAAGTCACCGGAG +
Preference number: 2 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGYQAQE*GRKSPE
Trigger: CTCCGGTGACTTTCTGCCTCATTCCTGTGCTTGGTA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAAAAATTAGCCAGGCATaGTGGCGGGCACCTGTTGTC +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGKISQA*WRAPVV
Trigger: GACAACAGGTGCCCGCCACCATGCCTGGCTAATTTT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATATGGGTTAGCTCTTTaGGGGCCAGCAGGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGYGLAL*GPAGRK
Trigger: TTTTCTCCCTGCTGGCCCTCAAAGAGCTAACCCATA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR GCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATCGTCCAGACCGCAAATaGTTATATGGACCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNRPDRK*LYGPVP
Trigger: AGGCACAGGTCCATATAAGCATTTGCGGTCTGGACG...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR GCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCAGCGCCCTAGGACCTaGGCGGCCGGTGTTCACACT +
Preference number: 2 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDQRPRT*AAGVHT
Trigger: AGTGTGAACACCGGCCGCGCAGGTCCTAGGGCGCTG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAGAAAAACACGTGCAATaGGCCGGGCGCCGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLEKHVQ*AGRRAQ
Trigger: CTGCGCCCGGCGCCCGGCCCATTGCACGTGTTTTTC...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGATTACTATGCAAAATCTaGGCCAGGCCCGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGLLCKI*ARPDGS
Trigger: TGAGCCATCGGGCCTGGCCCAGATTTTGCATAGTAA...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGCAGTGCCCACCGTCCTaGGGATCCTCAAACAGCAGA +
Preference number: 2 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKQCPPS*GSSNSR
Trigger: TCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTG...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR CCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCCCTCACCTCCCAGCTaGACTAGAGGGAGTGCCGTG +
Preference number: 2 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDPSPPS*TRGSAV
Trigger: CACGGCACTCCCTCTAGTCCAGCTGGGAGGTGAGGG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAGGGAGGGAGGCTCAGTaGGACCAAGTGCGCTATCAG +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLGREAQ*DQVRYQ
Trigger: CTGATAGCGCACTTGGTCTCACTGAGCCTCCCTCCC...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR GCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGACTCAGTGAGACCAAGTaGGCTATCAGCTTCAGAATT +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGLSETK*AISFRI
Trigger: AATTCTGAAGCTGATAGCGCACTTGGTCTCACTGAG...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGATTTACCTCCTTTATaGGTTAGCTCTTTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGDLPPL*VSSLRA
Trigger: GGCCCTCAAAGAGCTAACCCATAAAGGAGGTAAATC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CAA 90 bp AGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTaGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGC +
Preference number: 2 (lower is better)
Translates to: RPVVLRPGKNNGTAC*CLTQKMCFLARETR
Trigger: GCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAAATTCAACACTTGTGCTaGGGCACGGAAAAATGGCCA +
Preference number: 2 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKIQHLC*GTEKWP
Trigger: TGGCCATTTTTCCGTGCCTCAGCACAAGTGTTGAAT...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAAGCCAAGTTAGGTGCTaGGTTTTCAGTAAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGSQVRC*VFSKRS
Trigger: ACTTCTCTTACTGAAAACCCAGCACCTAACTTGGCT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAAGGCGGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLRRRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCCGCCT...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAAGCTCTTCAGAAAAGTaGTCTACTACTATGCTCTGT +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGSSSEK*STTMLC
Trigger: ACAGAGCATAGTAGTAGATCACTTTTCTGAAGAGCT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR GCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAACCCAGCTAGGAAGATaGTGTAAGTGCTTAAATTCA +
Preference number: 2 (lower is better)
Translates to: APLSMGRFQTWLLQENTGTQLGR*CKCLNS
Trigger: TGAATTTAAGCACTTACAGCATCTTCCTAGCTGGGT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTCGACGGTTCTCCTCGTaGGCAGCTGCTGCAAAGGTT +
Preference number: 2 (lower is better)
Translates to: VSALIVNSLLTCENSCPIRRFSS*AAAAKV
Trigger: AACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCG...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTGTGCTTTCTGGCACGTaGAACACGCCTGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAVLSGT*NTPALQ
Trigger: CTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCAC...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAGGCAGGTGGATCACTTaGAGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLGRWIT*SQEFET
Trigger: GGTCTCAAACTCCTGACTTCAAGTGATCCACCTGCC...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCACAGGCCAGGAGAATaGACGGATGACCAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDHRPGE*TDDQEK
Trigger: TTTCTCCTGGTCATCCGTCCATTCTCCTGGCCTGTG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAATCCTGTTCCTTGTTTTaGCCAGGCCAGTGCCCACCG +
Preference number: 2 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKSCSLF*PGQCPP
Trigger: CGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGA...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACCTCGTGAGCAGCTGCTaGAAAGGTTCAGTCACTCCA +
Preference number: 2 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYLVSSC*KGSVTP
Trigger: TGGAGTGACTGAACCTTTGCAGCAGCTGCTCACGAG...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACCTCCTCGTGAGCAGCTaGTGCAAAGGTTCAGTCACT +
Preference number: 2 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYLLVSS*CKGSVT
Trigger: AGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAG...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR GCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKADNWC*CCLGGA
Trigger: TGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGC...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR CCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTATTACTATGCAAAATCTaGGCCAGGCCCGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLLLCKI*ARPDGS
Trigger: TGAGCCATCGGGCCTGGCCCAGATTTTGCATAGTAA...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTGTGAGCCCCTCAGGCTaGATTCTACACCCAGATGTT +
Preference number: 2 (lower is better)
Translates to: VSALIVNSLLTCENSCPIVSPSG*ILHPDV
Trigger: AACATCTGGGTGTAGAATTCAGCCTGAGGGGCTCAC...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAGGGAACGGTCCCTTCTaGGAACACACAAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKGNGPF*EHTRAL
Trigger: CAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCC...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR-3UTR TCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTGGGAACGGTCCCTTCTaGGAACACACAAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFGNGPF*EHTRAL
Trigger: CAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCC...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACGCACAGAACAGGGACTaGTGCCCTAATACTTCTCCT +
Preference number: 2 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYAQNRD*CPNTSP
Trigger: AGGAGAAGTATTAGGGCAGCAGTCCCTGTTCTGTGC...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CAA 90 bp GCTGAGGCACGGAAAAATGGCCAGATGGGAGTTGTATTGTGTGACTaGGAAATAAAGCTCTACATGTCATATTCGAAGTACAAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: AEARKNGQMGVVLCD*EIKLYMSYSKYKFR
Trigger: TCTGAACTTGTACTTCGAATATGACATGTAGAGCTTTATTTCCAAGTCACACAATACAACTCCCATCTGGCCATTTTTCCGTGCCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CAA 90 bp AACACTTGTGCTGAGGCACGGAAAAATGGCCAGATGGGAGTTGTATaGTGTGACTTGGAAATAAAGCTCTACATGTCATATTCGAAGTAC +
Preference number: 2 (lower is better)
Translates to: NTCAEARKNGQMGVV*CDLEIKLYMSYSKY
Trigger: GTACTTCGAATATGACATGTAGAGCTTTATTTCCAAGTCACACAATACAACTCCCATCTGGCCATTTTTCCGTGCCTCAGCACAAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACACAGAATGCTGGGAGTaGACCTCAGTCACACATAAC +
Preference number: 2 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYTECWE*TSVTHN
Trigger: GTTATGTGTGACTGAGGTTCACTCCCAGCATTCTGT...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR GCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACAGAACAGGGACTGCTaGCCTAATACTTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRQNRDC*PNTSPA
Trigger: AGCAGGAGAAGTATTAGGGCAGCAGTCCCTGTTCTG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR GCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTGGCACAGCATGCTTGTaGCTAACACAGAAGATGTGC +
Preference number: 2 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFGTACL*LTQKMC
Trigger: GCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCC...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR GCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTAATGTGGGTGAAAAATaGAGGGGGCCATTACCCTCC +
Preference number: 2 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFNVGEK*RGPLPS
Trigger: GGAGGGTAATGGCCCCCTGCATTTTTCACCCACATT...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR GCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTATTCACTGTTTTACTATaGAAAATCTGGGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLFTVLL*KIWARP
Trigger: GGGCCTGGCCCAGATTTTGCATAGTAAAACAGTGAA...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR GCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTACACCCAGATGTTATaGTCCTCCCTCAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: VSALIVNSLLTCENSCPIYTQML*SSLRLN
Trigger: ATTCAGCCTGAGGGAGGAGCATAACATCTGGGTGTA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTCCGCAAATGCTTATATaGACCTGTGCCTACCGACAA +
Preference number: 2 (lower is better)
Translates to: VSALIVNSLLTCENSCPIPQMLI*TCAYRQ
Trigger: TTGTCGGTAGGCACAGGTCCATATAAGCATTTGCGG...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTTCCTCCACCCATCATTaGGTATATAAAGGCGCTTGT +
Preference number: 2 (lower is better)
Translates to: IFILHWSQAKLNVKPNCASSTHH*VYKGAC
Trigger: ACAAGCGCCTTTATATACTCAATGATGGGTGGAGGA...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CAA 90 bp CCTCACAATCTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTaGTTAACAGAGTTCAGAAGGTTCCTGAATATTCAGAAACACCAC +
Preference number: 2 (lower is better)
Translates to: PHNLSSHLSSSFIPI*LTEFRRFLNIQKHH
Trigger: GTGGTGTTTCTGAATATTCAGGAACCTTCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAGATTGTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAAAGAGAAGTTTCATCTaGGAAAACCAATGGTGTCTT +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLKRSFI*ENQWCL
Trigger: AAGACACCATTGGTTTTCTCAGATGAAACTTCTCTT...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR TCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAGTCCAGATAACAGGATaGCATAGAACTATCTTCTAT +
Preference number: 2 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLVQITG*HRTIFY
Trigger: ATAGAAGATAGTTCTATGTCATCCTGTTATCTGGAC...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CAA 90 bp GAACATGTTGATTACCAACATGTGAGAAGTGTTGACACTGTTTGCTaGAGGAAGTTAAACGCTTCCTTAATGTGTGCATCGTTAATTTGT +
Preference number: 2 (lower is better)
Translates to: EHVDYQHVRSVDTVC*RKLNASLMCASLIC
Trigger: ACAAATTAACGATGCACACATTAAGGAAGCGTTTAACTTCCTCAAGCAAACAGTGTCAACACTTCTCACATGTTGGTAATCAACATGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTTTTTTGTTTTGCCTTTaGCAGAACAGTCCAACTCCT +
Preference number: 2 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAFLFCL*QNSPTP
Trigger: AGGAGTTGGACTGTTCTGTCAAAGGCAAAACAAAAA...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CAA 90 bp ATCATCACAGTGTTGAGTGTTTCAGCATTAATAGTGAACAGTCTTTaGACCTGTGAAAATAGCTGTCCCATTTCATATGGAAGAAAACCA +
Preference number: 2 (lower is better)
Translates to: IITVLSVSALIVNSL*TCENSCPISYGRKP
Trigger: TGGTTTTCTTCCATATGAAATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAACACTCAACACTGTGATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTGGGAGTTGTATTGTGTaGCTTGGAAATAAAGCTCTA +
Preference number: 2 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVGSCIV*LGNKAL
Trigger: TAGAGCTTTATTTCCAAGTCACACAATACAACTCCC...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CCA 72 bp GCCCACCGTCCTGGGGATCCTCAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGTGGGGCAAGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: AHRPGDPQTADN*CCCCLGGASSR
Trigger: CCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR GCA 72 bp CGTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCAAGTTCCAGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: RPGDPQTADNWC*CCLGGASSRRA
Trigger: GGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR GCA 72 bp CACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGGGCAAGTTCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: HRPGDPQTADNW*CCCLGGASSRR
Trigger: TCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR CCA 72 bp TGCTGTTGCTTGGGTGGGGCAAGTTCCAGGAGAGCCTaGACCGTCACTGCAACCTGGCTCAAACCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: CCCLGGASSRRA*TVTATWLKPFS
Trigger: AGAGAAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR CAA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 3 (lower is better)
Translates to: LCLTQKMCFLARETRLLSVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR CCA 72 bp ATCCTCAAACAGCAGATAACTGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGAGAGCCTGGACCGTCA +
Preference number: 3 (lower is better)
Translates to: ILKQQITGAAVA*VGQVPGEPGPS
Trigger: TGACGGTCCAGGCTCTCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
3UTR-3UTR CAA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 3 (lower is better)
Translates to: LTQKMCFLARETRLLSRKVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR-3UTR CAA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSTVSCS*FWPGQC
Trigger: GCACTGGCCTGGCCAAAACAAGGAACAGGACACCGT...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR TCA 72 bp ACAATCTCAGCCCACTGCAACCTTCGGCTTCCAGGTTaGAGCGATTCTTGTGCCTCAGCCACCCAAGTAGCT +
Preference number: 3 (lower is better)
Translates to: TISAHCNLRLPG*SDSCASATQVA
Trigger: AGCTACTTGGGTGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTGAGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR GCA 72 bp AATGGCACAGCATGCTTGTGCCTAACACAGAAGATGTaGTTTCTGGCACGTGAAACACGCCTGCTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: NGTACLCLTQKM*FLARETRLLSR
Trigger: CCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CCA 72 bp CCATCTGCTCGTGTGCAGCACATACAGCGTATAGACTaGGCTCAGAAGAGCAGTCTAGGGAATGTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: PSARVQHIQRID*AQKSSLGNVGD
Trigger: ATCACCCACATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACGAGCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 72 bp ACCAGAAAAGGCACGACGGTTCTCCTCGTGAGCAGCTaGTGCAAAGGTTCAGTCACTCCACAATTCAACACT +
Preference number: 3 (lower is better)
Translates to: TRKGTTVLLVSS*CKGSVTPQFNT
Trigger: AGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCGTGCCTTTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 72 bp AGAAAAGGCACGACGGTTCTCCTCGTGAGCAGCTGCTaGAAAGGTTCAGTCACTCCACAATTCAACACTTGT +
Preference number: 3 (lower is better)
Translates to: RKGTTVLLVSSC*KGSVTPQFNTC
Trigger: ACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCGTGCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 72 bp TTATGGCCAATACCTTTGAAACGTCCAGACCGCAAATaGTTATATGGACCTGTGCCTACCGACAAAGCGGGG +
Preference number: 3 (lower is better)
Translates to: LWPIPLKRPDRK*LYGPVPTDKAG
Trigger: CCCCGCTTTGTCGGTAGGCACAGGTCCATATAAGCATTTGCGGTCTGGACGTTTCAAAGGTATTGGCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAGAACACACAAGAGCTTaGTTTAAGCAGACAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LTQKMCFLARETRLLSRKEHTRA*FKQTAG
Trigger: GCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTC...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR TCA 72 bp GGCAACTCCGCCAGCTCTTCAGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGGTCTCTCAAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: GNSASSSGKCTR*FLLTLRSLKAS
Trigger: GGAGGCCTTGAGAGACCTTAATGTAAGAAGAAATCACCTAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
3UTR CCA 72 bp AATACCTTTGAAACGTCCAGACCGCAAATGCTTATATaGACCTGTGCCTACCGACAAAGCGGGGATTCAGGA +
Preference number: 3 (lower is better)
Translates to: NTFETSRPQMLI*TCAYRQSGDSG
Trigger: TCCTGAATCCCCGCTTTGTCGGTAGGCACAGGTCCATATAAGCATTTGCGGTCTGGACGTTTCAAAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CCA 72 bp ACAAAGGCCCCTCTTTCCATGGGTCGTTTCCAGACCTaGCTATTACAAGAGAACACTGGAGTGCTAAACACA +
Preference number: 3 (lower is better)
Translates to: TKAPLSMGRFQT*LLQENTGVLNT
Trigger: TGTGTTTAGCACTCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGCCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CAA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLTVSCS*FWPGQC
Trigger: GCACTGGCCTGGCCAAAACAAGGAACAGGACACCGT...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CAA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 3 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR GCA 72 bp GTGCTACGCATTCTGAAAGAGCTAGACAATATTCACTaGCTTGAGCACAGAACAGGGACTGCTGCCCTAATA +
Preference number: 3 (lower is better)
Translates to: VLRILKELDNIH*LEHRTGTAALI
Trigger: TATTAGGGCAGCAGTCCCTGTTCTGTGCTCAAGGCAGTGAATATTGTCTAGCTCTTTCAGAATGCGTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CCA 72 bp CTGTGTTCTAGCAGAATACAAAGGCCCCTCTTTCCATaGGTCGTTTCCAGACCTGGCTATTACAAGAGAACA +
Preference number: 3 (lower is better)
Translates to: LCSSRIQRPLFP*VVSRPGYYKRT
Trigger: TGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGCCTTTGTATTCTGCTAGAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGTTGTATTGTGTGACTaGGAAATAAAGCTCTACATG +
Preference number: 3 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGVVLCD*EIKLYM
Trigger: CATGTAGAGCTTTATTTCCAAGTCACACAATACAAC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFTVSCS*FWPGQC
Trigger: GCACTGGCCTGGCCAAAACAAGGAACAGGACACCGT...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR TCA 72 bp CAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTaGGGCACGGAAAAATGGCCAGATGGGAGTTGTATT +
Preference number: 3 (lower is better)
Translates to: QRFSHSTIQHLC*GTEKWPDGSCI
Trigger: AATACAACTCCCATCTGGCCATTTTTCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACTTATGGGTTAGCTCTTaGAGGGCCAGCAGGGAGAAA +
Preference number: 3 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDLWVSS*RASREK
Trigger: TTTCTCCCTGCTGGCCCTCAAAGAGCTAACCCATAA...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 72 bp AACACAGATTATGAGTCTGAAATACTGGGAAACTGCTaGCAGAAAATCTCTGTACGTGGCAAGGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: NTDYESEILGNC*QKISVRGKGSA
Trigger: AGCAGAGCCCTTGCCACGTACAGAGATTTTCTGTCAGCAGTTTCCCAGTATTTCAGACTCATAATCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CAA 90 bp AGAAGTCTAACCGTATCAAAGGCAACTCCGCCAGCTCTTCAGGCAAATGTACTACTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 3 (lower is better)
Translates to: RSLTVSKATPPALQANVLLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...TAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTTTGATACGGTTAGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
3UTR CCA 72 bp CAGGGGAGCTGTGACAAGGTCATCTTCATCTTACACTaGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGT +
Preference number: 3 (lower is better)
Translates to: QGSCDKVIFILH*SQAKLNVKPNC
Trigger: ACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGATGACCTTGTCACAGCTCCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR-3UTR CAA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACATGGCCAGATGGGAGTaGTATTGTGTGACTTGGAAA +
Preference number: 3 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDMARWE*YCVTWK
Trigger: TTTCCAAGTCACACAATACAACTCCCATCTGGCCAT...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 72 bp GGCACGGAAAAATGGCCAGATGGGAGTTGTATTGTGTaGCTTGGAAATAAAGCTCTACATGTCATATTCGAA +
Preference number: 3 (lower is better)
Translates to: GTEKWPDGSCIV*LGNKALHVIFE
Trigger: TTCGAATATGACATGTAGAGCTTTATTTCCAAGTCACACAATACAACTCCCATCTGGCCATTTTTCCGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR TCA 72 bp CTATACATACAACAGAGGGAAAACAATACCGCAGGGTaGAAGCAACATCCTTTATCCCTGATGAATAAAAGG +
Preference number: 3 (lower is better)
Translates to: LYIQQRENNTAG*KQHPLSLMNKR
Trigger: CCTTTTATTCATCAGGGATAAAGGATGTTGCTTTCACCCTGCGGTATTGTTTTCCCTCTGTTGTATGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR GCA 72 bp GTTGATTACCAACATGTGAGAAGTGTTGACACTGTTTaGTTGAGGAAGTTAAACGCTTCCTTAATGTGTGCA +
Preference number: 3 (lower is better)
Translates to: VDYQHVRSVDTV*LRKLNASLMCA
Trigger: TGCACACATTAAGGAAGCGTTTAACTTCCTCAAGCAAACAGTGTCAACACTTCTCACATGTTGGTAATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCTTTGTAGAAATACTTaGAGTGCAACTGCAAGTCTA +
Preference number: 3 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDLCRNT*SATASL
Trigger: TAGACTTGCAGTTGCACTCAAAGTATTTCTACAAAG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACAGATGGGAGTTGTATaGTGTGACTTGGAAATAAAG +
Preference number: 3 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRQMGVV*CDLEIK
Trigger: CTTTATTTCCAAGTCACACAATACAACTCCCATCTG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTCCTTTATCCCAATTTaGTTAACAGAGTTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: VSALIVNSLLTCENSCPISFIPI*LTEFRR
Trigger: CCTTCTGAACTCTGTTAACAAAATTGGGATAAAGGA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR-3UTR CAA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTTATCAGCTTCAGAATTaGGAAACTCTGTATAGAGAG +
Preference number: 3 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFYQLQN*ETLYRE
Trigger: CTCTCTATACAGAGTTTCCAAATTCTGAAGCTGATA...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR TCA 72 bp GGGCTTGTTGTTTATTATAATGTCCAGATAACAGGATaGCATAGAACTATCTTCTATGATGGTATGACTGCA +
Preference number: 3 (lower is better)
Translates to: GLVVYYNVQITG*HRTIFYDGMTA
Trigger: TGCAGTCATACCATCATAGAAGATAGTTCTATGTCATCCTGTTATCTGGACATTATAATAAACAACAAGCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR TCA 72 bp AATGTAAAGGATTTAATATCCTGGTATTTAACAGCCTaGATTATTCCAGGGAACTACTATGTAAGCTTAGGC +
Preference number: 3 (lower is better)
Translates to: NVKDLISWYLTA*IIPGNYYVSLG
Trigger: GCCTAAGCTTACATAGTAGTTCCCTGGAATAATTCAGGCTGTTAAATACCAGGATATTAAATCCTTTACATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGVLGSR*HSDQAR
Trigger: GCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTAC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGAKTRA*PGAWAA
Trigger: TGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGCRAAS*ASLRVR
Trigger: GCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCTGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTCRAAS*ASLRVR
Trigger: GCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCA...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRVLGSR*HSDQAR
Trigger: GCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTAC...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAVLGSR*HSDQAR
Trigger: GCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTAC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGACTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGLPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGLPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCCTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTLPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHAKTRA*PGAWAA
Trigger: TGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGC...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPACPGA*AAVNTR
Trigger: CCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGC...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAACPGA*AAVNTR
Trigger: CCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCCCGTCAGGTCGTGGTTaGCCGCTCCCCGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTPSGRG*PLPGET
Trigger: AGTTTCCCCGGGGAGCGGCCAACCACGACCTGACGG...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCACAGGTCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTTGPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGACCTGT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGACAGGTCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWTGPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGACCTGT...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRCRAAS*ASLRVR
Trigger: GCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTGGCTCCTGTGCGGTGTaGGCCCTTGGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRGSCAV*ALGPFS
Trigger: GGAAAAGGGCCCAAGGGCTCACACCGCACAGGAGCC...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTTTTGGCCAGGCCAGTaGCCACCGTCCTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGFWPGQ*PPSWGS
Trigger: GGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGTTTTGGCCAGGCCAGTaGCCACCGTCCTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGFWPGQ*PPSWGS
Trigger: GGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAA...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQACPGA*AAVNTR
Trigger: CCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCGTCAGGTCGTGGTTaGCCGCTCCCCGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRPSGRG*PLPGET
Trigger: AGTTTCCCCGGGGAGCGGCCAACCACGACCTGACGG...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGCTGGGTCTGGTCCCTTaGGCTGTCTCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWLGLVP*AVSPRP
Trigger: AGGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAG...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTGTCATCCCAGCACTCTaGGAGGCCGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRVIPAL*EAGHSG
Trigger: GCCACTGTGCCCGGCCTCCCAGAGTGCTGGGATGAC...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTTTTGGCCAGGCCAGTaGCCACCGTCCTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRFWPGQ*PPSWGS
Trigger: GGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGACGTGGCAAGGGCTCTaGTGGGGGTGGCTCTCAACC +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLTWQGL*WGWLST
Trigger: GGTTGAGAGCCACCCCCAGCAGAGCCCTTGCCACGT...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGTCATCCCAGCACTCTaGGAGGCCGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASVIPAL*EAGHSG
Trigger: GCCACTGTGCCCGGCCTCCCAGAGTGCTGGGATGAC...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCAGAAAAACACGTGCAATaGGCCGGGCGCCGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QPTATFGFQVEAILVPQPEKHVQ*AGRRAQ
Trigger: CTGCGCCCGGCGCCCGGCCCATTGCACGTGTTTTTC...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CAA 72 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCS*FWPGQCPPSWG
Trigger: TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRELGPQ*TPGRLP
Trigger: AGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTC...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGTGCTTTCTGGCACGTaGAACACGCCTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGVLSGT*NTPALQ
Trigger: CTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCAC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTTGCCCAGGCTGGAGTaGAGTGGTGCAGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALPRLE*SGAAMA
Trigger: AGCCATGGCTGCACCACTGCACTCCAGCCTGGGCAA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAGTTCCAGGAGAGCCTaGACCGTCACTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGSSRRA*TVTATW
Trigger: CCAGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACT...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGAGTTCCAGGAGAGCCTaGACCGTCACTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGSSRRA*TVTATW
Trigger: CCAGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACT...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATCAGTGCCCACCGTCCTaGGGATCCTCAAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDQCPPS*GSSNSR
Trigger: TCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTG...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCAGTGCCCACCGTCCTaGGGATCCTCAAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGQCPPS*GSSNSR
Trigger: TCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTG...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGCAGTGCCCACCGTCCTaGGGATCCTCAAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWQCPPS*GSSNSR
Trigger: TCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTG...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTCCTGTTCCTTGTTTTaGCCAGGCCAGTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGSCSLF*PGQCPP
Trigger: CGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp ACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTGCTGTTGCTTGGGTGGAAAAACACGTGCAATaGGCCGGGCGCCGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TVLGILKQQITGAAVAWVEKHVQ*AGRRAQ
Trigger: CTGCGCCCGGCGCCCGGCCCATTGCACGTGTTTTTC...CACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTGCGGTGTGAGCCCTTaGGCCCTTTTCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRCGVSP*ALFLHP
Trigger: TGGGTGGAGGAAAAGGGCCCAAGGGCTCACACCGCA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAGGCCCCTCTTTCCATaGGTCGTTTCCAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTRPLFP*VVSRPG
Trigger: GCCAGGTCTGGAAACGACCCATGGAAAGAGGGGCCT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATGGAAGGTGCCCACCCTaGGAGGCCAGCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNGRCPP*EASSSP
Trigger: TGGGCTGGAGCTGGCCTCTCAGGGTGGGCACCTTCC...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGVLGSR*HSDQAR
Trigger: GCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTAC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTA +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGGLLFL*GAAVYV
Trigger: TACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCC...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGAACTGGTGCTGCTGTTaGTTGGGTGGGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGNWCCC*LGGASS
Trigger: GGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTT...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWADNWC*CCLGGA
Trigger: TGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGC...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGADNWC*CCLGGA
Trigger: TGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCTTGCCCAGGCTGGGGTaGAATGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASALPRLG*NGTILA
Trigger: AGCCAAGATCGTGCCATTGCACCCCAGCCTGGGCAA...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGCTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWLRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGCAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDCAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGCAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTTCCAGGAGAGCCTaGACCGTCACTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQASSRRA*TVTATW
Trigger: CCAGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACT...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPGAAVA*VGQVPG
Trigger: TCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACC...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTCCTGTTCCTTGTTTTaGCCAGGCCAGTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRSCSLF*PGQCPP
Trigger: CGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTCCTGTTCCTTGTTTTaGCCAGGCCAGTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHSCSLF*PGQCPP
Trigger: CGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGA...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATACTGGTGAACCCTCATaGGAGATTCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDTGEPS*EIRRCS
Trigger: TGAACAGCGGCGAATCTCTCATGAGGGTTCACCAGT...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGCACTTGATTCAACCCTaGCAGCGACATGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWHLIQP*QRHAQG
Trigger: GCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTG...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDCWFLP*HLLGKG
Trigger: TCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACA...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGCWFLP*HLLGKG
Trigger: TCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGCTGGTGAGGGAACATaGATGCTTGGGACAGATCGA +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGAGEGT*MLGTDR
Trigger: TCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGCTGGTGAGGGAACATaGATGCTTGGGACAGATCGA +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTAGEGT*MLGTDR
Trigger: TCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGC...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACAGGCGGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHRRRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCCGCCT...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCCTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LCLTQKMCFLARETRLLSLPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTA +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAGLLFL*GAAVYV
Trigger: TACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGAGCCTGGACCGTCACTaGAACCTGGCTCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWSLDRH*NLAQTF
Trigger: AAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCT...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHADNWC*CCLGGA
Trigger: TGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGC...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGTADNW*CCCLGG
Trigger: CCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGT...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGACAGCGCCCTAGGACCTaGGCGGCCGGTGTTCACACT +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGQRPRT*AAGVHT
Trigger: AGTGTGAACACCGGCCGCGCAGGTCCTAGGGCGCTG...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGACACGTGAAACACGCCTaGTCTCCAGGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGHVKHA*SPGKHS
Trigger: GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTG...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCCGTCAGGTCGTGGTTaGCCGCTCCCCGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLPSGRG*PLPGET
Trigger: AGTTTCCCCGGGGAGCGGCCAACCACGACCTGACGG...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCCTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTLPRFS*YWLSLR
Trigger: ACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAG...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGCTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGLPRFS*YWLSLR
Trigger: ACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAG...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTAAGGCTGTCTGGGTCTaGTCCCTTGGGCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASKAVWV*SLGLSH
Trigger: GTGAGACAGCCCAAGGGACCAGACCCAGACAGCCTT...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASALRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASGAAVA*VGQVPG
Trigger: TCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACC...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCACAGTGCCCACCGTCCTaGGGATCCTCAAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QPTATFGFQVEAILVPQPQCPPS*GSSNSR
Trigger: TCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTG...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAAAAATTAGCCAGGCATaGTGGCGGGCACCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGKISQA*WRAPVV
Trigger: GACAACAGGTGCCCGCCACCATGCCTGGCTAATTTT...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAAAATTAGCCAGGCATaGTGGCGGGCACCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTKISQA*WRAPVV
Trigger: GACAACAGGTGCCCGCCACCATGCCTGGCTAATTTT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTTTTGTTGCCCAGGCTaGGGTGCAATGGCACGATCT +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDFCCPG*GAMARS
Trigger: AGATCGTGCCATTGCACCCCAGCCTGGGCAACAAAA...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGTCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGCACTGTCCACACTATTaGAGCCTGAATCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGHCPHY*SLNQGL
Trigger: GAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTG...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCTTCCAGGTCTGTGTGTaGCAGCTGATTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTFQVCV*QLIVTC
Trigger: GCAAGTCACAATCAGCTGTCACACACAGACCTGGAA...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHCWFLP*HLLGKG
Trigger: TCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACA...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGAAGGGGTGAAGCATaGCCTTTGTTGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLGRGEA*PLLVSA
Trigger: GGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCC...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTACGCTGAGGTTTAGCTaGAGGATGTCGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRTLRFS*RMSEGE
Trigger: TTCCCCTTCCGACATCCTTCAGCTAAACCTCAGCGT...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR TCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGAACGGTCCCTTCTaGGAACACACAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPGNGPF*EHTRAL
Trigger: CAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCC...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGGCTCCTGTGCGGTGTaGGCCCTTGGGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAGSCAV*ALGPFS
Trigger: GGAAAAGGGCCCAAGGGCTCACACCGCACAGGAGCC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAGGTCAGGGGAGCTGTaGCAAGGTCATCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTRSGEL*QGHLHL
Trigger: AAGATGAAGATGACCTTGTCACAGCTCCCCTGACCT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATAGATGGAGGAAGGGGTaGAGCATGACCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDRWRKG*SMTCFC
Trigger: ACAGAAACAGGTCATGCTTCACCCCTTCCTCCATCT...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433298.5
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTTCTGCCCTGACACCTaGTCGGAAAAGGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGFCPDT*SEKEAF
Trigger: GAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTCTGCCCTGACACCTaGTCGGAAAAGGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGFCPDT*SEKEAF
Trigger: GAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCACCTTTGTTGGTTTCTaGCCTGACACCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTTFVGF*PDTCSE
Trigger: TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGACCTTTGTTGGTTTCTaGCCTGACACCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGTFVGF*PDTCSE
Trigger: TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGT...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACAGCCTGGACCGTCACTaGAACCTGGCTCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHSLDRH*NLAQTF
Trigger: AAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCT...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQATADNW*CCCLGG
Trigger: CCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGT...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHTADNW*CCCLGG
Trigger: CCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGT...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCTTTTGGCCAGGCCAGTaGCCACCGTCCTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: LCLTQKMCFLARETRLLSFWPGQ*PPSWGS
Trigger: GGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAA...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGAGAAAGTCACCGGAGTaGAATCTTTCAGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLRKSPE*NLSASG
Trigger: CCCGCTCGCTGAAAGATTGCACTCCGGTGACTTTCT...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR GCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCACGTGAAACACGCCTaGTCTCCAGGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAHVKHA*SPGKHS
Trigger: GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCTGAGATTATGCCACTaGACTCTAGCCTGGGCGACT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALRLCH*TLAWAT
Trigger: AGTCGCCCAGGCTAGAGTGCAGTGGCATAATCTCAG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGCTGAGATTATGCCACTaGACTCTAGCCTGGGCGACT +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLLRLCH*TLAWAT
Trigger: AGTCGCCCAGGCTAGAGTGCAGTGGCATAATCTCAG...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGAATTTCGCTTTTGTTaGCCAGGCTGGGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTEFRFC*PGWGAM
Trigger: CATTGCACCCCAGCCTGGGCAACAAAAGCGAAATTC...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCACGTGGCAAGGGCTCTaGTGGGGGTGGCTCTCAACC +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLTWQGL*WGWLST
Trigger: GGTTGAGAGCCACCCCCAGCAGAGCCCTTGCCACGT...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRLPRFS*YWLSLR
Trigger: ACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAG...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGACTGGGTCTGGTCCCTTaGGCTGTCTCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: APLSMGRFQTWLLQENTGLGLVP*AVSPRP
Trigger: AGGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAG...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTCTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASLRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTCAGTGCCCACCGTCCTaGGGATCCTCAAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPIIEYIKALVVERDGARQCPPS*GSSNSR
Trigger: TCTGCTGTTTGAGGATCCCCAGGACGGTGGGCACTG...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGAAGGTTTCACCATGTTaGCCAGGCTGGCTTGCGTAT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWKVSPC*PGWLAY
Trigger: ATACGCAAGCCAGCCTGGCCAACATGGTGAAACCTT...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSELGPQ*TPGRLP
Trigger: AGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTC...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGELGPQ*TPGRLP
Trigger: AGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGTGTACCGGCAATGTTaGCAGTTGGTTCCGACTAAT +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGVYRQC*QLVPTN
Trigger: ATTAGTCGGAACCAACTGTCAACATTGCCGGTACAC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTCCATAAGGGCGACTTaGGTACAGTTCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWSIRAT*VQFFMA
Trigger: TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGA...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTCCATAAGGGCGACTTaGGTACAGTTCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDSIRAT*VQFFMA
Trigger: TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGA...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGCACACTATTGAAGCCTaGATCAAGGGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWHTIEA*IKGSIR
Trigger: CCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTG...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTCACTGTCCACACTATTaGAGCCTGAATCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPHCPHY*SLNQGL
Trigger: GAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTG...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTGTCCACACTATTaGAGCCTGAATCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAHCPHY*SLNQGL
Trigger: GAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTG...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCACTGTCCACACTATTaGAGCCTGAATCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRHCPHY*SLNQGL
Trigger: GAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTG...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASALSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTCACTTGATTCAACCCTaGCAGCGACATGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASHLIQP*QRHAQG
Trigger: GCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTG...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQCWFLP*HLLGKG
Trigger: TCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGGAAGGGGTGAAGCATaGCCTTTGTTGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQGRGEA*PLLVSA
Trigger: GGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGGAAGGGGTGAAGCATaGCCTTTGTTGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASGRGEA*PLLVSA
Trigger: GGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCC...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGATGGAGGAAGGGGTaGAGCATGACCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQARWRKG*SMTFVG
Trigger: ACCAACAAAGGTCATGCTTCACCCCTTCCTCCATCT...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTTTAGGTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGFRYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTACCTAAA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTTGAAGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALKSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACTTCAA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCTTGAAGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASALKSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACTTCAA...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCGGCGGGAGGATCAGTTaGGCCCAGGAGTTTCAGACC +
Preference number: 4 (lower is better)
Translates to: LCLTQKMCFLARETRLLSGGRIS*AQEFQT
Trigger: GGTCTGAAACTCCTGGGCTCAACTGATCCTCCCGCC...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACGGCGGGAGGATCAGTTaGGCCCAGGAGTTTCAGACC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHGGRIS*AQEFQT
Trigger: GGTCTGAAACTCCTGGGCTCAACTGATCCTCCCGCC...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAAACTAGCTGAAACTTaGGTAAAGGCTCCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTKLAET*VKAPVR
Trigger: CCGCACAGGAGCCTTTACTCAAGTTTCAGCTAGTTT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKAKTRA*PGAWAA
Trigger: TGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGC...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATCCATCTAGGAGCGGGTaGTGTTTTTGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDPSRSG*CFCGLC
Trigger: ACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGG...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTTCTGCCCTGACACCTaGTCGGAAAAGGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRFCPDT*SEKEAF
Trigger: GAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACGAATTTCGCTTTTGTTaGCCAGGCTGGGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHEFRFC*PGWGAM
Trigger: CATTGCACCCCAGCCTGGGCAACAAAAGCGAAATTC...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTTGCCCAGGCTGGAGTaGAGTGGTGCAGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLLPRLE*SGAAMA
Trigger: AGCCATGGCTGCACCACTGCACTCCAGCCTGGGCAA...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAGTACAGTTCTTCATaGCAGGAGCCAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGEYSSS*QEPKPN
Trigger: GTTGGGTTTTGGCTCCTGCCATGAAGAACTGTACTC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGAGTACAGTTCTTCATaGCAGGAGCCAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGEYSSS*QEPKPN
Trigger: GTTGGGTTTTGGCTCCTGCCATGAAGAACTGTACTC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTTGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: PPIIEYIKALVVERDGARCAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCCAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTQTADN*CCCCLG
Trigger: ACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTG...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCCTGGGCCAGGCCCGATaGCTCACTCCAGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLLGQAR*LTPVIP
Trigger: TGGGATTACTGGAGTGAGCCATCGGGCCTGGCCCAG...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTTACTATGCAAAATCTaGGCCAGGCCCGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALLCKI*ARPDGS
Trigger: TGAGCCATCGGGCCTGGCCCAGATTTTGCATAGTAA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTCCAGCTCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCPAPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGAGCTGG...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441090.6
3UTR CAA 72 bp CACAATCTCAGCCCACTGCAACCTTCGGCTTCCAGGTaGAAGCGATTCTTGTGCCTCAGCCACCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HNLSPLQPSASR*KRFLCLSHPSS
Trigger: GCTACTTGGGTGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTGAGATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCGTGTACCGGCAATGTTaGCAGTTGGTTCCGACTAAT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAVYRQC*QLVPTN
Trigger: ATTAGTCGGAACCAACTGTCAACATTGCCGGTACAC...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTCCATAAGGGCGACTTaGGTACAGTTCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHSIRAT*VQFFMA
Trigger: TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGA...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTGTAGGTTCATTCCCTaGCCATCTCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWCRFIP*PSLITT
Trigger: AGTGGTGATAAGAGATGGTCAGGGAATGAACCTACA...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTTCCAGGTCTGTGTGTaGCAGCTGATTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQFQVCV*QLIVTC
Trigger: GCAAGTCACAATCAGCTGTCACACACAGACCTGGAA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCCRAAS*ASLRVR
Trigger: GCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCA...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp ATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCAAGTGCAGCACAGCCCACTTaGTTCAACCCTGACAGCGAC +
Preference number: 4 (lower is better)
Translates to: MCFLARETRLLSRKTQPSAAQPT*FNPDSD
Trigger: GTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGC...ACTTGGCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAGGCAGGAGAATCGCTTaGGCCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRGRRIA*AREAEV
Trigger: AACCTCCGCCTCCCGGGCTCAAGCGATTCTCCTGCC...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGGCAGGAGAATCGCTTaGGCCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCGRRIA*AREAEV
Trigger: AACCTCCGCCTCCCGGGCTCAAGCGATTCTCCTGCC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGGGAGGGAGGCTCAGTaGGACCAAGTGCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAGREAQ*DQVRYQ
Trigger: CTGATAGCGCACTTGGTCTCACTGAGCCTCCCTCCC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAAACTAGCTGAAACTTaGGTAAAGGCTCCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAKLAET*VKAPVR
Trigger: CCGCACAGGAGCCTTTACTCAAGTTTCAGCTAGTTT...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGAAGTCTAACCGTATCAAAGGCAACTCCGCCAGCTCTTCAGGCAAATGTACTACTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RSLTVSKATPPALQANVLLPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...TAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTTTGATACGGTTAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR GCA 90 bp AAGGCAACTCCGCCAGCTCTTCAGGCAAATGTACTAGGTGATTTCTTCTTACATGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: KATPPALQANVLGDFFLHAKTRA*PGAWAA
Trigger: TGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGC...ATGTAAGAAGAAATCACCTAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGLLLPN*RGSLGT
Trigger: AGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGASLWI*LVLIFS
Trigger: GGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGC...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWASLWI*LVLIFS
Trigger: GGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGC...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTTCTGCCCTGACACCTaGTCGGAAAAGGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQFCPDT*SEKEAF
Trigger: GAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGGCACAGCATGCTTGTaGCTAACACAGAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQGTACL*LTQKMC
Trigger: GCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATAACAATGGCACAGCATaGTTGTGCCTAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDNNGTA*LCLTQK
Trigger: CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTT...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGATACATGAAAAACACGTaGAATGGGCCGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: APLSMGRFQTWLLQENTGYMKNT*NGPGAG
Trigger: CCCGGCGCCCGGCCCATTGCACGTGTTTTTCATGTA...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTCACTGTTTTACTATaGAAAATCTGGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGFTVLL*KIWARP
Trigger: GGGCCTGGCCCAGATTTTGCATAGTAAAACAGTGAA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCTGTATGTGCTGTAACTaGAATGTGTCTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASACMCCN*NVSAGP
Trigger: TGGGCCTGCAGACACATTGCAGTTACAGCACATACA...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGAGTACAGTTCTTCATaGCAGGAGCCAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAEYSSS*QEPKPN
Trigger: GTTGGGTTTTGGCTCCTGCCATGAAGAACTGTACTC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGRFSWY*LSLRSL
Trigger: AAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCG...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTEVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDEVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAAGTTCCAGGAGAGCCTaGACCGTCACTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: APLSMGRFQTWLLQENTGSSRRA*TVTATW
Trigger: CCAGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLGAAVA*VGQVPG
Trigger: TCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACC...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAQTADN*CCCCLG
Trigger: ACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp ATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCAAGTTCCTGTTCCTTGTTTTaGCCAGGCCAGTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: MCFLARETRLLSRKTQPSSCSLF*PGQCPP
Trigger: CGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGA...ACTTGGCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGTCGTTTCCAGACCTaGCTATTACAAGAGAACACT +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGGRFQT*LLQENT
Trigger: AGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCAGGCCCCTCTTTCCATaGGTCGTTTCCAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSRPLFP*VVSRPG
Trigger: GCCAGGTCTGGAAACGACCCATGGAAAGAGGGGCCT...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGCACACTATTGAAGCCTaGATCAAGGGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQHTIEA*IKGSIR
Trigger: CCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTG...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTCACACTATTGAAGCCTaGATCAAGGGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASHTIEA*IKGSIR
Trigger: CCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTG...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTCGAAGAGGCAGATCTaGAAATTCATCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWSKRQI*KFICRF
Trigger: GAACCTACAGATGAATTTTCAGATCTGCCTCTTCGA...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTGATGCTTTTTGTTTaGCAAAGTCCAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWVMLFV*QSPGQH
Trigger: ATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCAC...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAGTGCTTTCTGGCACGTaGAACACGCCTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKVLSGT*NTPALQ
Trigger: CTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCAC...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCAAGTGGTTCCACTACATaGAAAACACGTGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: QPTATFGFQVEAILVPQPSGSTT*KTRAMG
Trigger: GCCCATTGCACGTGTTTTTCATGTAGTGGAACCACT...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GAAACCAGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCGGGAGGGAGGCTCAGTaGGACCAAGTGCGCTATCAG +
Preference number: 4 (lower is better)
Translates to: ETSRPVVLRPGKNNGTACGREAQ*DQVRYQ
Trigger: CTGATAGCGCACTTGGTCTCACTGAGCCTCCCTCCC...GCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAAATCCTGTCCTTTGCTaGATTTCATTTCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGNPVLC*ISFLVA
Trigger: TGCCACCAGAAATGAAATTCAGCAAAGGACAGGATT...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTTTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRLLLPN*RGSLGT
Trigger: AGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAA...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHLLLPN*RGSLGT
Trigger: AGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAA...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAAACTGGTGCTGCTGTTaGTTGGGTGGGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPNWCCC*LGGASS
Trigger: GGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGAACTGGTGCTGCTGTTaGTTGGGTGGGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLNWCCC*LGGASS
Trigger: GGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTT...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCAACTGGTGCTGCTGTTaGTTGGGTGGGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLNWCCC*LGGASS
Trigger: GGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTT...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPADNWC*CCLGGA
Trigger: TGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGC...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAGCAGATAACTGGTGCTaGTGTTGCTTGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: APLSMGRFQTWLLQENTGADNWC*CCLGGA
Trigger: TGCCCCACCCAAGCAACAGCAGCACCAGTTATCTGC...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCACAGCCAAGTTAGGTaGTGGGTTTTCAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAHSQVR*WVFSKR
Trigger: TCTCTTACTGAAAACCCAGCACCTAACTTGGCTGTG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGTATGTGCTGTAACTaGAATGTGTCTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQCMCCN*NVSAGP
Trigger: TGGGCCTGCAGACACATTGCAGTTACAGCACATACA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQARFSWY*LSLRSL
Trigger: AAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLEVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAEVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTCGTTTCCAGACCTaGCTATTACAAGAGAACACT +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPGRFQT*LLQENT
Trigger: AGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACC...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AAGGCAACTCCGCCAGCTCTTCAGGCAAATGTACTAGGTGATTTCTTCTTACATCACATCCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KATPPALQANVLGDFFLHHIPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGGATGTG...ATGTAAGAAGAAATCACCTAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR TCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGWEGIV*ISLQLT
Trigger: TGTGAGCTGCAATGAAATTCAAACTATACCTTCCCA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTTCGAAGAGGCAGATCTaGAAATTCATCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPSKRQI*KFICRF
Trigger: GAACCTACAGATGAATTTTCAGATCTGCCTCTTCGA...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACTCGAAGAGGCAGATCTaGAAATTCATCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHSKRQI*KFICRF
Trigger: GAACCTACAGATGAATTTTCAGATCTGCCTCTTCGA...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGTCGAAGAGGCAGATCTaGAAATTCATCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLSKRQI*KFICRF
Trigger: GAACCTACAGATGAATTTTCAGATCTGCCTCTTCGA...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTATACGCCATAAACTGTaGACTAAGGCTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PPIIEYIKALVVERDGARIRHKL*TKAVWV
Trigger: GACCCAGACAGCCTTAGTTCACAGTTTATGGCGTAT...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAACTGGTGAACCCTCATaGGAGATTCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPTGEPS*EIRRCS
Trigger: TGAACAGCGGCGAATCTCTCATGAGGGTTCACCAGT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGACACTTGATTCAACCCTaGCAGCGACATGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGHLIQP*QRHAQG
Trigger: GCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTG...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGACACTTGATTCAACCCTaGCAGCGACATGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: APLSMGRFQTWLLQENTGHLIQP*QRHAQG
Trigger: GCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTG...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGCTGGTGAGGGAACATaGATGCTTGGGACAGATCGA +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPAGEGT*MLGTDR
Trigger: TCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGC...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGCTGGTGAGGGAACATaGATGCTTGGGACAGATCGA +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGAGEGT*MLGTDR
Trigger: TCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATACGCTGAGGTTTAGCTaGAGGATGTCGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNTLRFS*RMSEGE
Trigger: TTCCCCTTCCGACATCCTTCAGCTAAACCTCAGCGT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGAAAACTGGATTCTTCTaGGTGTGCCCCAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQKTGFF*VCPKRK
Trigger: CTTTCTCTTGGGGCACACTCAGAAGAATCCAGTTTT...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR TCA 90 bp GGAGAGCCTGGACCGTCACTGCAACCTGGCTCAAACCTTTCTCTTCTAAAATGTAGGCGGAGGTTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GEPGPSLQPGSNLSLLKCRRRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAACCTCCGCCT...ACATTTTAGAAGAGAAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR TCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCATCCTCCACCCATCATTaGGTATATAAAGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: QPTATFGFQVEAILVPQPSSTHH*VYKGAC
Trigger: ACAAGCGCCTTTATATACTCAATGATGGGTGGAGGA...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGGAAGGAAAACTAGCTaGAACTTGAGTAAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQGRKTS*NLSKGS
Trigger: GGAGCCTTTACTCAAGTTTCAGCTAGTTTTCCTTCC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCGGAAGGGGTGAAGCATaGCCTGTTTCTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSGRGEA*PVSVAG
Trigger: ACCTGCAACAGAAACAGGTCATGCTTCACCCCTTCC...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433298.5
CDS-3UTR GCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGVLGSR*HSDQAR
Trigger: GCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTAC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTCTTTAGTAATCTCTaGTACTCGAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGFFSNL*YSKRQI
Trigger: GATCTGCCTCTTCGAGTAGCAGAGATTACTAAAGAA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAAGCCTGGACCGTCACTaGAACCTGGCTCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPSLDRH*NLAQTF
Trigger: AAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCAGCCTGGACCGTCACTaGAACCTGGCTCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSSLDRH*NLAQTF
Trigger: AAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCT...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLTADNW*CCCLGG
Trigger: CCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGT...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAACAGCAGATAACTGGTaGTGCTGTTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPTADNW*CCCLGG
Trigger: CCCACCCAAGCAACAGCAGCACCAGTTATCTGCTGT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGCTTATATGGACCTGTaGCTACCGACAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGAYMDL*LPTKRG
Trigger: TCCCCGCTTTGTCGGTAGGCACAGGTCCATATAAGC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTCTAACACAGAAGATGTaGTTTCTGGCACGTGAAACA +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPLTQKM*FLARET
Trigger: TGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGGAAGATGCTGTAAGTaGTTAAATTCAGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTGRCCK*LNSATE
Trigger: TTCTGTGGCTGAATTTAAGCACTTACAGCATCTTCC...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAAGATGCTGTAAGTaGTTAAATTCAGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWGRCCK*LNSATE
Trigger: TTCTGTGGCTGAATTTAAGCACTTACAGCATCTTCC...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp ATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCAAGTACAATCTCAGCCCACTaGAACCTTCGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MCFLARETRLLSRKTQPSTISAH*NLRLPG
Trigger: ACCTGGAAGCCGAAGGTTGCAGTGGGCTGAGATTGT...ACTTGGCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAACAATCTCAGCCCACTaGAACCTTCGGCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPTISAH*NLRLPG
Trigger: ACCTGGAAGCCGAAGGTTGCAGTGGGCTGAGATTGT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGACPGA*AAVNTR
Trigger: CCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDACPGA*AAVNTR
Trigger: CCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGC...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCACGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QPTATFGFQVEAILVPQPRFSWY*LSLRSL
Trigger: AAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCG...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAAAAGGCTGTCTGGGTCTaGTCCCTTGGGCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKKAVWV*SLGLSH
Trigger: GTGAGACAGCCCAAGGGACCAGACCCAGACAGCCTT...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATT +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASRTASL*ICLVLI
Trigger: AATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCT...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAACTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKLRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATCACAGGCCAGGAGAATaGACGGATGACCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNHRPGE*TDDQEK
Trigger: TTTCTCCTGGTCATCCGTCCATTCTCCTGGCCTGTG...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGTTTTGTTGCCCAGGCTaGGGTGCAATGGCACGATCT +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLFCCPG*GAMARS
Trigger: AGATCGTGCCATTGCACCCCAGCCTGGGCAACAAAA...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTTTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASFYRNF*KAISRQ
Trigger: CTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAA...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGGKCTR*FLLTLR
Trigger: CCTTAATGTAAGAAGAAATCACCTAGTACATTTGCC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGCTGGAACCCTGTTTTaGTGTAAATATCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGAGTLF*CKYLLI
Trigger: TATGAGAAGATATTTACATCAAAACAGGGTTCCAGC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGCTGGAACCCTGTTTTaGTGTAAATATCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDAGTLF*CKYLLI
Trigger: TATGAGAAGATATTTACATCAAAACAGGGTTCCAGC...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGCTGGAACCCTGTTTTaGTGTAAATATCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGAGTLF*CKYLLI
Trigger: TATGAGAAGATATTTACATCAAAACAGGGTTCCAGC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCTGGAACCCTGTTTTaGTGTAAATATCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWAGTLF*CKYLLI
Trigger: TATGAGAAGATATTTACATCAAAACAGGGTTCCAGC...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACTTCCAGGTCTGTGTGTaGCAGCTGATTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHFQVCV*QLIVTC
Trigger: GCAAGTCACAATCAGCTGTCACACACAGACCTGGAA...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGCRAAS*ASLRVR
Trigger: GCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGTGATGCTTTTTGTTTaGCAAAGTCCAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQVMLFV*QSPGQH
Trigger: ATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCAC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGTGATGCTTTTTGTTTaGCAAAGTCCAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASVMLFV*QSPGQH
Trigger: ATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCAC...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPLSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCCTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLLSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLLSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGGCAGCACAGCCCACTTaGTTCAACCCTGACAGCGAC +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKAAQPT*FNPDSD
Trigger: GTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGC...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAGCAGCACAGCCCACTTaGTTCAACCCTGACAGCGAC +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRAAQPT*FNPDSD
Trigger: GTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGC...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAAGATGGAGGAAGGGGTaGAGCATGACCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGRWRKG*SMTFVG
Trigger: ACCAACAAAGGTCATGCTTCACCCCTTCCTCCATCT...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATTATGGGTTAGCTCTTTaGGGGCCAGCAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNYGLAL*GPAGRK
Trigger: TTTTCTCCCTGCTGGCCCTCAAAGAGCTAACCCATA...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAAGAAAACCAAACCAGTaGGCCCCTCAGGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGRKPNQ*APQAEF
Trigger: GAATTCAGCCTGAGGGGCTCACTGGTTTGGTTTTCT...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGGGAACGGTCCCTTCTaGGAACACACAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAGNGPF*EHTRAL
Trigger: CAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGGCAGGTGGATCACTTaGAGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAGRWIT*SQEFET
Trigger: GGTCTCAAACTCCTGACTTCAAGTGATCCACCTGCC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCAGGTCAGGGGAGCTGTaGCAAGGTCATCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSRSGEL*QGHLHL
Trigger: AAGATGAAGATGACCTTGTCACAGCTCCCCTGACCT...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGAGCTCTTCAGAAAAGTaGTCTACTACTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLSSSEK*STTMLC
Trigger: ACAGAGCATAGTAGTAGATCACTTTTCTGAAGAGCT...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTTCCACATTTCGCCTaGATTTCGCCATTGTTAATT +
Preference number: 4 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGFPHFA*ISPLLI
Trigger: AATTAACAATGGCGAAATGCAGGCGAAATGTGGAAA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTTTCCACATTTCGCCTaGATTTCGCCATTGTTAATT +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGFPHFA*ISPLLI
Trigger: AATTAACAATGGCGAAATGCAGGCGAAATGTGGAAA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAAGCCTGGACCGTCACTaGAACCTGGCTCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLASLDRH*NLAQTF
Trigger: AAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCT...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGTTTTGGCCAGGCCAGTaGCCACCGTCCTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEFWPGQ*PPSWGS
Trigger: GGATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAA...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGACGTCCAGACCGCAAATaGTTATATGGACCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGRPDRK*LYGPVP
Trigger: AGGCACAGGTCCATATAAGCATTTGCGGTCTGGACG...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGTACATGAAAAACACGTaGAATGGGCCGGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKYMKNT*NGPGAG
Trigger: CCCGGCGCCCGGCCCATTGCACGTGTTTTTCATGTA...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCAATGTGGGTGAAAAATaGAGGGGGCCATTACCCTCC +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSNVGEK*RGPLPS
Trigger: GGAGGGTAATGGCCCCCTGCATTTTTCACCCACATT...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACACCCAGCTAGGAAGATaGTGTAAGTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHTQLGR*CKCLNS
Trigger: TGAATTTAAGCACTTACAGCATCTTCCTAGCTGGGT...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACCGTCAGGTCGTGGTTaGCCGCTCCCCGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGPSGRG*PLPGET
Trigger: AGTTTCCCCGGGGAGCGGCCAACCACGACCTGACGG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCCGTCAGGTCGTGGTTaGCCGCTCCCCGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDPSGRG*PLPGET
Trigger: AGTTTCCCCGGGGAGCGGCCAACCACGACCTGACGG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp ATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTGAATCCGTCAGGTCGTGGTTaGCCGCTCCCCGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: IKVSQGLQVTNLGRYSLNPSGRG*PLPGET
Trigger: AGTTTCCCCGGGGAGCGGCCAACCACGACCTGACGG...ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR CCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTAACAGGTCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLTGPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGACCTGT...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACACAGGTCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDTGPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGACCTGT...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGGCAATGTTGACAGTTaGTTCCGACTAATATTTAAG +
Preference number: 4 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTGNVDS*FRLIFK
Trigger: CTTAAATATTAGTCGGAACCAACTGTCAACATTGCC...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASIIRQI*SNLTSL
Trigger: CAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTAT...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQIIRQI*SNLTSL
Trigger: CAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTAT...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGAAGGCTGTCTGGGTCTaGTCCCTTGGGCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKKAVWV*SLGLSH
Trigger: GTGAGACAGCCCAAGGGACCAGACCCAGACAGCCTT...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GAAACCAGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCCTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: ETSRPVVLRPGKNNGTACLRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...GCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAATGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKCAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAAGTTCCAGGAGAGCCTaGACCGTCACTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRSSRRA*TVTATW
Trigger: CCAGGTTGCAGTGACGGTCCAGGCTCTCCTGGAACT...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCTTACTATGCAAAATCTaGGCCAGGCCCGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LCLTQKMCFLARETRLLSLLCKI*ARPDGS
Trigger: TGAGCCATCGGGCCTGGCCCAGATTTTGCATAGTAA...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCCTGCTCTCAAACTCCTaGGCTCAAGTGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLLLSNS*AQVILL
Trigger: CAAGAGGATCACTTGAGCCCAGGAGTTTGAGAGCAG...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTAGGGTATATAAGAGTTaGTGGGTCTGTTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PPIIEYIKALVVERDGARRVYKS*WVCWEL
Trigger: CAGTTCCCAACAGACCCACCAACTCTTATATACCCT...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEELGPQ*TPGRLP
Trigger: AGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTC...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACGTGTACCGGCAATGTTaGCAGTTGGTTCCGACTAAT +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHVYRQC*QLVPTN
Trigger: ATTAGTCGGAACCAACTGTCAACATTGCCGGTACAC...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTTGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASWEGIV*ISLQLT
Trigger: TGTGAGCTGCAATGAAATTCAAACTATACCTTCCCA...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAGKCTR*FLLTLR
Trigger: CCTTAATGTAAGAAGAAATCACCTAGTACATTTGCC...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATATACGCCATAAACTGTaGACTAAGGCTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNIRHKL*TKAVWV
Trigger: GACCCAGACAGCCTTAGTTCACAGTTTATGGCGTAT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACATACGCCATAAACTGTaGACTAAGGCTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHIRHKL*TKAVWV
Trigger: GACCCAGACAGCCTTAGTTCACAGTTTATGGCGTAT...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAAGATGGAGGAAGGGGTaGAGCATGACCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKRWRKG*SMTFVG
Trigger: ACCAACAAAGGTCATGCTTCACCCCTTCCTCCATCT...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCATTTAGGTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPFRYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTACCTAAA...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATTTAGGTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGFRYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTACCTAAA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCTTTAGGTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LCLTQKMCFLARETRLLSFRYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTACCTAAA...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATATTCAACACTTGTGCTaGGGCACGGAAAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNIQHLC*GTEKWP
Trigger: TGGCCATTTTTCCGTGCCTCAGCACAAGTGTTGAAT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATGCTCCTCCCTCAGGCTaGATTCTAAACCGGATATTA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNAPPSG*ILNRIL
Trigger: TAATATCCGGTTTAGAATTCAGCCTGAGGGAGGAGC...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACGTCCAGATAACAGGATaGCATAGAACTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHVQITG*HRTIFY
Trigger: ATAGAAGATAGTTCTATGTCATCCTGTTATCTGGAC...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTCCAGATAACAGGATaGCATAGAACTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLVQITG*HRTIFY
Trigger: ATAGAAGATAGTTCTATGTCATCCTGTTATCTGGAC...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTTTATTACACGCCACTaGAGTGTTGGCTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQAFITRH*SVGFYL
Trigger: CAAATAAAAGCCAACACTTCAGTGGCGTGTAATAAA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGCTCCAAGCACAGGAATaGGGCAGAAAGTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKLQAQE*GRKSPE
Trigger: CTCCGGTGACTTTCTGCCTCATTCCTGTGCTTGGAG...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR GCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLAKTRA*PGAWAA
Trigger: TGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTA +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCGLLFL*GAAVYV
Trigger: TACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCACCATCTAGGAGCGGGTaGTGTTTTTGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPPSRSG*CFCGLC
Trigger: ACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGG...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCCCATCTAGGAGCGGGTaGTGTTTTTGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLPSRSG*CFCGLC
Trigger: ACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGG...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGACCATCTAGGAGCGGGTaGTGTTTTTGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGPSRSG*CFCGLC
Trigger: ACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGG...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp ATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCAAGTCCATCTAGGAGCGGGTaGTGTTTTTGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: MCFLARETRLLSRKTQPSPSRSG*CFCGLC
Trigger: ACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGG...ACTTGGCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGAACTGGTGCTGCTGTTaGTTGGGTGGGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKNWCCC*LGGASS
Trigger: GGAACTTGCCCCACCCAAGCAACAGCAGCACCAGTT...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAACTCCTCGTGAGCAGCTaGTGCAAAGGTTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKLLVSS*CKGSVT
Trigger: AGTGACTGAACCTTTGCAGCAGCTGCTCACGAGGAG...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTTATGCCCAAATGGATaGATTGTAAAGAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGLCPNG*IVKKIQ
Trigger: CTGGATTTTCTTTACAATGCATCCATTTGGGCATAA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCAATGTTGACAGTTaGTTCCGACTAATATTTAAG +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLGNVDS*FRLIFK
Trigger: CTTAAATATTAGTCGGAACCAACTGTCAACATTGCC...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACGAGTACAGTTCTTCATaGCAGGAGCCAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHEYSSS*QEPKPN
Trigger: GTTGGGTTTTGGCTCCTGCCATGAAGAACTGTACTC...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAACTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKLPRFS*YWLSLR
Trigger: ACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAG...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCACAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPQTADN*CCCCLG
Trigger: ACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTG...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTAGCCAAGTTAGGTGCTaGGTTTTCAGTAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PPIIEYIKALVVERDGARSQVRC*VFSKRS
Trigger: ACTTCTCTTACTGAAAACCCAGCACCTAACTTGGCT...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCACCATGTTGGCCAGGCTaGCTTGCGTATGTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPPCWPG*LAYVKN
Trigger: GTTTTTAACATACGCAAGCCAGCCTGGCCAACATGG...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACCCATGTTGGCCAGGCTaGCTTGCGTATGTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHPCWPG*LAYVKN
Trigger: GTTTTTAACATACGCAAGCCAGCCTGGCCAACATGG...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGAAAATCTCTGTACGTaGCAAGGGCTCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCENLCT*QGLCWG
Trigger: CCCCCAGCAGAGCCCTTGCCACGTACAGAGATTTTC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGTGATTGTAGTGGATTGTTATCTAGGGTGATCGTCTGTAGGTGCCTGAGGTTCTCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: GDCSGLLSRVIVCRCLRFSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...GAACCTCAGGCACCTACAGACGATCACCCTAGATAACAATCCACTACAATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPICRAAS*ASLRVR
Trigger: GCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKLSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp ACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTGCTGTTGCTTGGGTGTTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: TVLGILKQQITGAAVAWVFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...CACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR TCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCATTTAGGTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAFRYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTACCTAAA...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATAAAACTGGATTCTTCTaGGTGTGCCCCAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNKTGFF*VCPKRK
Trigger: CTTTCTCTTGGGGCACACTCAGAAGAATCCAGTTTT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATATAACTCAGCCTGCATaGGTTCTACGCTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNITQPA*VLRYLH
Trigger: ATGCAGATAGCGTAGAACTCATGCAGGCTGAGTTAT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAGGGAACGGTCCCTTCTaGGAACACACAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRGNGPF*EHTRAL
Trigger: CAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCC...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGGGGAACGGTCCCTTCTaGGAACACACAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKGNGPF*EHTRAL
Trigger: CAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCC...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGAAGAGAAGTTTCATCTaGGAAAACCAATGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQKRSFI*ENQWCL
Trigger: AAGACACCATTGGTTTTCTCAGATGAAACTTCTCTT...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCAAAGAGAAGTTTCATCTaGGAAAACCAATGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QPTATFGFQVEAILVPQPKRSFI*ENQWCL
Trigger: AAGACACCATTGGTTTTCTCAGATGAAACTTCTCTT...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGGGAAGGAAAACTAGCTaGAACTTGAGTAAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLGRKTS*NLSKGS
Trigger: GGAGCCTTTACTCAAGTTTCAGCTAGTTTTCCTTCC...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTATTTGGAGACTGTACTaGGGCTTAATGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: PPIIEYIKALVVERDGARIWRLY*GLMLTN
Trigger: GTTTGTCAACATTAAGCCTCAGTACAGTCTCCAAAT...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLLPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTCTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPILPTLP*QSTRQP
Trigger: CGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAG...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVAKTRA*PGAWAA
Trigger: TGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGC...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGASLWI*LVLIFS
Trigger: GGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLASLWI*LVLIFS
Trigger: GGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGC...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCACACAGCCAAGTTAGGTaGTGGGTTTTCAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPHSQVR*WVFSKR
Trigger: TCTCTTACTGAAAACCCAGCACCTAACTTGGCTGTG...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GAAACCAGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCGGCACAGCATGCTTGTaGCTAACACAGAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: ETSRPVVLRPGKNNGTACGTACL*LTQKMC
Trigger: GCACATCTTCTGTGTTAGGCACAAGCATGCTGTGCC...GCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGTTCACTGTTTTACTATaGAAAATCTGGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLFTVLL*KIWARP
Trigger: GGGCCTGGCCCAGATTTTGCATAGTAAAACAGTGAA...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAACAGGTCCGCCCGGGTaGTGTCCGTCAGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLTGPPG*CPSGRG
Trigger: ACCACGACCTGACGGACACCACCCGGGCGGACCTGT...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATCGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNRFSWY*LSLRSL
Trigger: AAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCG...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTCTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCLPRFS*YWLSLR
Trigger: ACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAG...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATT +
Preference number: 4 (lower is better)
Translates to: LCLTQKMCFLARETRLLSRTASL*ICLVLI
Trigger: AATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCT...GGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WQQQSRCPVPCFGQASAHICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...GTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCTTCTCTTCTAAAATGTaGAGAGGCAAACATAATTGC +
Preference number: 4 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAFSSKM*RGKHNC
Trigger: GCAATTATGTTTGCCTCTCCACATTTTAGAAGAGAA...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAACAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKQTADN*CCCCLG
Trigger: ACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTG...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCACAAACAGCAGATAACTaGTGCTGCTGTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAQTADN*CCCCLG
Trigger: ACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTG...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATATACAGCGTATAGACTaGGCTCAGAAGAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNIQRID*AQKSSL
Trigger: TAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTAT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACCCCTCACCTCCCAGCTaGACTAGAGGGAGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYPSPPS*TRGSAV
Trigger: CACGGCACTCCCTCTAGTCCAGCTGGGAGGTGAGGG...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACTGGGCCAGGCCCGATaGCTCACTCCAGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLLGQAR*LTPVIP
Trigger: TGGGATTACTGGAGTGAGCCATCGGGCCTGGCCCAG...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGGCAATGGCACGATCTTaGCTCACCACAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEAMARS*LTTTSA
Trigger: GGCGGAGGTTGTGGTGAGCCAAGATCGTGCCATTGC...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCAGGGTATATAAGAGTTaGTGGGTCTGTTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSRVYKS*WVCWEL
Trigger: CAGTTCCCAACAGACCCACCAACTCTTATATACCCT...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTATCTTCATCTTACACTaGAGTCAAGCAAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPIFILH*SQAKLN
Trigger: ATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTATTACAAGAGAACACTaGAGTGCTAAACACAGATTA +
Preference number: 4 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRITREH*SAKHRL
Trigger: TAATCTGTGTTTAGCACTCCAGTGTTCTCTTGTAAT...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTTGTCAATGTGTAAAGTaGCGTACAGGCAATTTAAAA +
Preference number: 4 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPCQCVK*RTGNLK
Trigger: TTTTAAATTGCCTGTACGCCACTTTACACATTGACA...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGTGTCAATGTGTAAAGTaGCGTACAGGCAATTTAAAA +
Preference number: 4 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLCQCVK*RTGNLK
Trigger: TTTTAAATTGCCTGTACGCCACTTTACACATTGACA...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAAGTGTACCGGCAATGTTaGCAGTTGGTTCCGACTAAT +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKVYRQC*QLVPTN
Trigger: ATTAGTCGGAACCAACTGTCAACATTGCCGGTACAC...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATGTGATGCTTTTTGTTTaGCAAAGTCCAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNVMLFV*QSPGQH
Trigger: ATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCAC...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGCAGCACAGCCCACTTaGTTCAACCCTGACAGCGAC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGAAQPT*FNPDSD
Trigger: GTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTAGATGGAGGAAGGGGTaGAGCATGACCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCRWRKG*SMTFVG
Trigger: ACCAACAAAGGTCATGCTTCACCCCTTCCTCCATCT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GAAACCAGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCAGTGGTTCCACTACATaGAAAACACGTGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: ETSRPVVLRPGKNNGTACSGSTT*KTRAMG
Trigger: GCCCATTGCACGTGTTTTTCATGTAGTGGAACCACT...GCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACGTTTTACAAAGGCAGTaGACACCAAAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHVLQRQ*TPKDIT
Trigger: GGTGATATCCTTTGGTGTTCACTGCCTTTGTAAAAC...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAATACTGGGAAACTGCTaGCAGAAAATCTCTGTACGT +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPILGNC*QKISVR
Trigger: ACGTACAGAGATTTTCTGTCAGCAGTTTCCCAGTAT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAATTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKLLLPN*RGSLGT
Trigger: AGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAA...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAACCTTTGTTGGTTTCTaGCCTGACACCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRTFVGF*PDTCSE
Trigger: TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGT...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCTAACACAGAAGATGTaGTTTCTGGCACGTGAAACA +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSLTQKM*FLARET
Trigger: TGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAACTCAGTGAGACCAAGTaGGCTATCAGCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKLSETK*AISFRI
Trigger: AATTCTGAAGCTGATAGCGCACTTGGTCTCACTGAG...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGAGAGCCTGGACCGTCACTGCAACCTGGCTCAAACCTTTCTCTTCTAAAATGTCGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GEPGPSLQPGSNLSLLKCRFSWY*LSLRSL
Trigger: AAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCG...ACATTTTAGAAGAGAAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACTGGGTCTGGTCCCTTaGGCTGTCTCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLLGLVP*AVSPRP
Trigger: AGGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTCTGGGTCTGGTCCCTTaGGCTGTCTCACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPILGLVP*AVSPRP
Trigger: AGGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAG...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATT +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLARTASL*ICLVLI
Trigger: AATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCT...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGTGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQECAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTTCTCTTCTAAAATGTaGAGAGGCAAACATAATTGC +
Preference number: 4 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQFSSKM*RGKHNC
Trigger: GCAATTATGTTTGCCTCTCCACATTTTAGAAGAGAA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGAGCCAAGTTAGGTGCTaGGTTTTCAGTAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: ACLCLTQKMCFLARETRLSQVRC*VFSKRS
Trigger: ACTTCTCTTACTGAAAACCCAGCACCTAACTTGGCT...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTAAGGTTTCACCATGTTaGCCAGGCTGGCTTGCGTAT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCKVSPC*PGWLAY
Trigger: ATACGCAAGCCAGCCTGGCCAACATGGTGAAACCTT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGGAAAATCTCTGTACGTaGCAAGGGCTCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEENLCT*QGLCWG
Trigger: CCCCCAGCAGAGCCCTTGCCACGTACAGAGATTTTC...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp ACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTGCTGTTGCTTGGGTGATGAGTCTGAAATACTaGGAAACTGCTGACAGAAAA +
Preference number: 4 (lower is better)
Translates to: TVLGILKQQITGAAVAWVMSLKY*ETADRK
Trigger: TTTTCTGTCAGCAGTTTCCCAGTATTTCAGACTCAT...CACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLELGPQ*TPGRLP
Trigger: AGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACTGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHWEGIV*ISLQLT
Trigger: TGTGAGCTGCAATGAAATTCAAACTATACCTTCCCA...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGCACACTATTGAAGCCTaGATCAAGGGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKHTIEA*IKGSIR
Trigger: CCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTG...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp ATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCAAGTTTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: MCFLARETRLLSRKTQPSFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...ACTTGGCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGGCTGGTGAGGGAACATaGATGCTTGGGACAGATCGA +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEAGEGT*MLGTDR
Trigger: TCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGC...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACCGACGGTTCTCCTCGTaGGCAGCTGCTGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYRRFSS*AAAAKV
Trigger: AACCTTTGCAGCAGCTGCTCACGAGGAGAACCGTCG...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATTGGTATTTAACAGCCTaGATTATTCCAGGGAACTAC +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNWYLTA*IIPGNY
Trigger: GTAGTTCCCTGGAATAATTCAGGCTGTTAAATACCA...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAGTTTTACAAAGGCAGTaGACACCAAAGGATATCACC +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKVLQRQ*TPKDIT
Trigger: GGTGATATCCTTTGGTGTTCACTGCCTTTGTAAAAC...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCATCATTAGTCACTGCTaGGCTGTAGAAAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: CLCLTQKMCFLARETRLLIISHC*AVESKR
Trigger: TCTCTTACTTTCTACAGCTCAGCAGTGACTAATGAT...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATTTCTTTAGTAATCTCTaGTACTCGAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNFFSNL*YSKRQI
Trigger: GATCTGCCTCTTCGAGTAGCAGAGATTACTAAAGAA...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCATTCTTTAGTAATCTCTaGTACTCGAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPFFSNL*YSKRQI
Trigger: GATCTGCCTCTTCGAGTAGCAGAGATTACTAAAGAA...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCAGCTCCAGCCCATCTaGTCGTGTGCAGCACATACA +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDQLQPI*SCAAHT
Trigger: TGTATGTGCTGCACACGAGCAGATGGGCTGGAGCTG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATAGTGTTGACACTGTTTaGTTGAGGAAGTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNSVDTV*LRKLNA
Trigger: AGCGTTTAACTTCCTCAAGCAAACAGTGTCAACACT...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GGAGAGCCTGGACCGTCACTGCAACCTGGCTCAAACCTTTCTCTTCTAAAATGTATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GEPGPSLQPGSNLSLLKCIIRQI*SNLTSL
Trigger: CAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTAT...ACATTTTAGAAGAGAAAGGTTTGAGCCAGGTTGCAGTGACGGTCCAGGCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGLRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAAATAACAAACACAATCTaGAAGGTGCCCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKITNTI*KVPTLR
Trigger: TCTCAGGGTGGGCACCTTCCAGATTGTGTTTGTTAT...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTGAAGCCTGTGCTTTCTaGGGCACCCTCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIEACAF*GTLTSQ
Trigger: CTGGGAGGTGAGGGTGCCCCAGAAAGCACAGGCTTC...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAAGCCAAGTTAGGTGCTaGGTTTTCAGTAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLASQVRC*VFSKRS
Trigger: ACTTCTCTTACTGAAAACCCAGCACCTAACTTGGCT...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAATGCGGTGTGAGCCCTTaGGCCCTTTTCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKCGVSP*ALFLHP
Trigger: TGGGTGGAGGAAAAGGGCCCAAGGGCTCACACCGCA...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GAAACCAGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: ETSRPVVLRPGKNNGTACFYRNF*KAISRQ
Trigger: CTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAA...GCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCTGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGATGTAGGTTCATTCCCTaGCCATCTCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRCRFIP*PSLITT
Trigger: AGTGGTGATAAGAGATGGTCAGGGAATGAACCTACA...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAACTGGTGAACCCTCATaGGAGATTCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGTGEPS*EIRRCS
Trigger: TGAACAGCGGCGAATCTCTCATGAGGGTTCACCAGT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAGCTGGAACCCTGTTTTaGTGTAAATATCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGAGTLF*CKYLLI
Trigger: TATGAGAAGATATTTACATCAAAACAGGGTTCCAGC...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTGCAGCACAGCCCACTTaGTTCAACCCTGACAGCGAC +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIAAQPT*FNPDSD
Trigger: GTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGC...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGCWFLP*HLLGKG
Trigger: TCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGGAAGGGGTGAAGCATaGCCTTTGTTGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGGRGEA*PLLVSA
Trigger: GGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGAGATGGAGGAAGGGGTaGAGCATGACCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQERWRKG*SMTFVG
Trigger: ACCAACAAAGGTCATGCTTCACCCCTTCCTCCATCT...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAAAGAGAAGTTTCATCTaGGAAAACCAATGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: APLSMGRFQTWLLQENTGKRSFI*ENQWCL
Trigger: AAGACACCATTGGTTTTCTCAGATGAAACTTCTCTT...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCTTTATTACACGCCACTaGAGTGTTGGCTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSFITRH*SVGFYL
Trigger: CAAATAAAAGCCAACACTTCAGTGGCGTGTAATAAA...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTA +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYGLLFL*GAAVYV
Trigger: TACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCC...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGACCTTTGTTGGTTTCTaGCCTGACACCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQETFVGF*PDTCSE
Trigger: TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGT...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAAACAATGGCACAGCATaGTTGTGCCTAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRNNGTA*LCLTQK
Trigger: CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTT...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACGGCAATGTTGACAGTTaGTTCCGACTAATATTTAAG +
Preference number: 4 (lower is better)
Translates to: HRRCAFWHVKHACSPGKHGNVDS*FRLIFK
Trigger: CTTAAATATTAGTCGGAACCAACTGTCAACATTGCC...GTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGLPRFS*YWLSLR
Trigger: ACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAAAGGCTGTCTGGGTCTaGTCCCTTGGGCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLKAVWV*SLGLSH
Trigger: GTGAGACAGCCCAAGGGACCAGACCCAGACAGCCTT...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACCTGAGACCTTCTGGATaGGAAGGGGCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYLRPSG*EGALTI
Trigger: GATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAG...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCEVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKGAAVA*VGQVPG
Trigger: TCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACC...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTGGTGCTGCTGTTGCTTaGGTGGGGCAAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFGAAVA*VGQVPG
Trigger: TCCTGGAACTTGCCCCACCCAAGCAACAGCAGCACC...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGAAGAGACAGACAAAACTaGATTCTTCTGAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRRDRQN*ILLSVP
Trigger: GGGCACACTCAGAAGAATCCAGTTTTGTCTGTCTCT...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR CCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTGCAATGGCACGATCTTaGCTCACCACAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAAMARS*LTTTSA
Trigger: GGCGGAGGTTGTGGTGAGCCAAGATCGTGCCATTGC...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAATGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKWEGIV*ISLQLT
Trigger: TGTGAGCTGCAATGAAATTCAAACTATACCTTCCCA...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACTCGTCTGTAGGTGCCTaGGGTTCCGATAACAAACAG +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDSSVGA*GSDNKQ
Trigger: CTGTTTGTTATCGGAACCTCAGGCACCTACAGACGA...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACACTGTCCACACTATTaGAGCCTGAATCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGHCPHY*SLNQGL
Trigger: GAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATTCCAGGTCTGTGTGTaGCAGCTGATTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGFQVCV*QLIVTC
Trigger: GCAAGTCACAATCAGCTGTCACACACAGACCTGGAA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGTGATGCTTTTTGTTTaGCAAAGTCCAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCVMLFV*QSPGQH
Trigger: ATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCAC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR TCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACGGAAGGGGTGAAGCATaGCCTTTGTTGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYGRGEA*PLLVSA
Trigger: GGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCC...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAAGATGGAGGAAGGGGTaGAGCATGACCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGRWRKG*SMTFVG
Trigger: ACCAACAAAGGTCATGCTTCACCCCTTCCTCCATCT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACGTGAGCCCCTCAGGCTaGATTCTACACCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYVSPSG*ILHPDV
Trigger: AACATCTGGGTGTAGAATTCAGCCTGAGGGGCTCAC...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTA +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLGLLFL*GAAVYV
Trigger: TACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATTCTGCCCTGACACCTaGTCGGAAAAGGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGFCPDT*SEKEAF
Trigger: GAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACTTCTGCCCTGACACCTaGTCGGAAAAGGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDFCPDT*SEKEAF
Trigger: GAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAA...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAACCTTTGTTGGTTTCTaGCCTGACACCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGTFVGF*PDTCSE
Trigger: TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCATTTCCACATTTCGCCTaGATTTCGCCATTGTTAATT +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAFPHFA*ISPLLI
Trigger: AATTAACAATGGCGAAATGCAGGCGAAATGTGGAAA...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCAGAACAGGGACTGCTaGCCTAATACTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDQNRDC*PNTSPA
Trigger: AGCAGGAGAAGTATTAGGGCAGCAGTCCCTGTTCTG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACGCACAGAACAGGGACTaGTGCCCTAATACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDAQNRD*CPNTSP
Trigger: AGGAGAAGTATTAGGGCAGCAGTCCCTGTTCTGTGC...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAACACTCAGAAGCCTGTaGTTTCTGGGGCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRTLRSL*FLGHPH
Trigger: GTGAGGGTGCCCCAGAAAGCACAGGCTTCTGAGTGT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAAGAGTTCTACGCTATCTaGATTATAATCCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKEFYAI*IIILTV
Trigger: CACAGTCAGGATTATAATGCAGATAGCGTAGAACTC...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACTAACACAGAAGATGTaGTTTCTGGCACGTGAAACA +
Preference number: 4 (lower is better)
Translates to: GIMGTVPSENTQELCLSRLTQKM*FLARET
Trigger: TGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR GCA 90 bp GAAACCAGCAGACCAGTTGTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCACCCAGCTAGGAAGATaGTGTAAGTGCTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: ETSRPVVLRPGKNNGTACTQLGR*CKCLNS
Trigger: TGAATTTAAGCACTTACAGCATCTTCCTAGCTGGGT...GCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCTGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGTAAACCATCTCAACTaGACTGTGTATATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GTVPSENTQELCLSRQLAVNHLN*TVYIER
Trigger: CCTTTCTATATACACAGTGCAGTTGAGATGGTTTAC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCIIRQI*SNLTSL
Trigger: CAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTAT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATGTGCTGAGACCTTCTaGATGGGAAGGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLCAETF*MGRGTH
Trigger: GTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCTTCTCTTCTAAAATGTaGAGAGGCAAACATAATTGC +
Preference number: 4 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSFSSKM*RGKHNC
Trigger: GCAATTATGTTTGCCTCTCCACATTTTAGAAGAGAA...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGTGTACCGGCAATGTTaGCAGTTGGTTCCGACTAAT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGVYRQC*QLVPTN
Trigger: ATTAGTCGGAACCAACTGTCAACATTGCCGGTACAC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp AGAAGTCTAACCGTATCAAAGGCAACTCCGCCAGCTCTTCAGGCAAATGTACTATGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: RSLTVSKATPPALQANVLWEGIV*ISLQLT
Trigger: TGTGAGCTGCAATGAAATTCAAACTATACCTTCCCA...TAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTTTGATACGGTTAGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACACACTATTGAAGCCTaGATCAAGGGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGHTIEA*IKGSIR
Trigger: CCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAATACGCCATAAACTGTaGACTAAGGCTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGIRHKL*TKAVWV
Trigger: GACCCAGACAGCCTTAGTTCACAGTTTATGGCGTAT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACACTTGATTCAACCCTaGCAGCGACATGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLHLIQP*QRHAQG
Trigger: GCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPICWFLP*HLLGKG
Trigger: TCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTGGAAGGGGTGAAGCATaGCCTTTGTTGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAGRGEA*PLLVSA
Trigger: GGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCC...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGCTGGTGAGGGAACATaGATGCTTGGGACAGATCGA +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLAGEGT*MLGTDR
Trigger: TCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAACTTACTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGTYYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTAGTAAGT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTATTTAGGTACAGCTGGTaGGGGAACATGAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLFRYSW*GNMNAW
Trigger: CCAAGCATTCATGTTCCCTCACCAGCTGTACCTAAA...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCAATTCCCCAAAGTCTaGAAGGCACCTACTGACACA +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDQFPKV*KAPTDT
Trigger: TGTGTCAGTAGGTGCCTTTCAGACTTTGGGGAATTG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAATTGATTACCAACATGTaGGAAGTGTTGACACTGTTT +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKLITNM*EVLTLF
Trigger: AAACAGTGTCAACACTTCTCACATGTTGGTAATCAA...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAATTTCCACATTTCGCCTaGATTTCGCCATTGTTAATT +
Preference number: 4 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKFPHFA*ISPLLI
Trigger: AATTAACAATGGCGAAATGCAGGCGAAATGTGGAAA...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTAGAAAGTCACCGGAGTaGAATCTTTCAGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIRKSPE*NLSASG
Trigger: CCCGCTCGCTGAAAGATTGCACTCCGGTGACTTTCT...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACTACACCCAGATGTTATaGTCCTCCCTCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDYTQML*SSLRLN
Trigger: ATTCAGCCTGAGGGAGGAGCATAACATCTGGGTGTA...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAACCTGCCCAGTGTTTTaGTGTCGGAAGAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRTCPVF*CRKRRA
Trigger: AGCACGTCTCTTCCGACAGCAAAACACTGGGCAGGT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTCACGTGAAACACGCCTaGTCTCCAGGAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAHVKHA*SPGKHS
Trigger: GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTG...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTCAGTGAGACCAAGTaGGCTATCAGCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQELSETK*AISFRI
Trigger: AATTCTGAAGCTGATAGCGCACTTGGTCTCACTGAG...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAGGGAACATGAATGCTTaGGACAGATCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRGNMNA*DRSRSH
Trigger: GTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCC...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAATTCTCTTCTAAAATGTaGAGAGGCAAACATAATTGC +
Preference number: 4 (lower is better)
Translates to: LTQKMCFLARETRLLSRKFSSKM*RGKHNC
Trigger: GCAATTATGTTTGCCTCTCCACATTTTAGAAGAGAA...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
3UTR CAA 72 bp GCTGAGGCACGGAAAAATGGCCAGATGGGAGTTGTATaGTGTGACTTGGAAATAAAGCTCTACATGTCATAT +
Preference number: 4 (lower is better)
Translates to: AEARKNGQMGVV*CDLEIKLYMSY
Trigger: ATATGACATGTAGAGCTTTATTTCCAAGTCACACAATACAACTCCCATCTGGCCATTTTTCCGTGCCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGTTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEFYRNF*KAISRQ
Trigger: CTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAA...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACACTGTCCACACTATTaGAGCCTGAATCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRHCPHY*SLNQGL
Trigger: GAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATGTAGGTTCATTCCCTaGCCATCTCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGCRFIP*PSLITT
Trigger: AGTGGTGATAAGAGATGGTCAGGGAATGAACCTACA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTACTGGTGAACCCTCATaGGAGATTCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVTGEPS*EIRRCS
Trigger: TGAACAGCGGCGAATCTCTCATGAGGGTTCACCAGT...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLLSSVC*DLLDGK
Trigger: CTTCCCATCCAGAAGGTCTCAGCACACTGATGATAG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGATCGAGGTCGCACATaGTTGGCCAAATGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLDRGRT*LAKWQR
Trigger: TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACAATATTCACTGCCTTaGGCACAGAACAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRQYSLP*AQNRDC
Trigger: GCAGTCCCTGTTCTGTGCTCAAGGCAGTGAATATTG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGAATCCTGTCCTTTGCTaGATTTCATTTCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQENPVLC*ISFLVA
Trigger: TGCCACCAGAAATGAAATTCAGCAAAGGACAGGATT...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGLLLPN*RGSLGT
Trigger: AGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGASLWI*LVLIFS
Trigger: GGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAACCTTTGTTGGTTTCTaGCCTGACACCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRTFVGF*PDTCSE
Trigger: TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTC +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLVREHE*LGQIEV
Trigger: GACCTCGATCTGTCCCAAGCATTCATGTTCCCTCAC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGTTTCCACATTTCGCCTaGATTTCGCCATTGTTAATT +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKFPHFA*ISPLLI
Trigger: AATTAACAATGGCGAAATGCAGGCGAAATGTGGAAA...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTAATGTGGGTGAAAAATaGAGGGGGCCATTACCCTCC +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCANVGEK*RGPLPS
Trigger: GGAGGGTAATGGCCCCCTGCATTTTTCACCCACATT...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGRFSWY*LSLRSL
Trigger: AAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGEVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAACTGCTCTCAAACTCCTaGGCTCAAGTGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKLLSNS*AQVILL
Trigger: CAAGAGGATCACTTGAGCCCAGGAGTTTGAGAGCAG...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
3UTR CAA 72 bp GATTACCAACATGTGAGAAGTGTTGACACTGTTTGCTaGAGGAAGTTAAACGCTTCCTTAATGTGTGCATCG +
Preference number: 4 (lower is better)
Translates to: DYQHVRSVDTVC*RKLNASLMCAS
Trigger: CGATGCACACATTAAGGAAGCGTTTAACTTCCTCAAGCAAACAGTGTCAACACTTCTCACATGTTGGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGFYRNF*KAISRQ
Trigger: CTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATCCATAAGGGCGACTTaGGTACAGTTCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLSIRAT*VQFFMA
Trigger: TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACACACTATTGAAGCCTaGATCAAGGGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRHTIEA*IKGSIR
Trigger: CCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATCGAAGAGGCAGATCTaGAAATTCATCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGSKRQI*KFICRF
Trigger: GAACCTACAGATGAATTTTCAGATCTGCCTCTTCGA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTTTCCAGGTCTGTGTGTaGCAGCTGATTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVFQVCV*QLIVTC
Trigger: GCAAGTCACAATCAGCTGTCACACACAGACCTGGAA...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGTGATGCTTTTTGTTTaGCAAAGTCCAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGVMLFV*QSPGQH
Trigger: ATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCAC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAACAGAATGCTGGGAGTaGACCTCAGTCACACATAAC +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRTECWE*TSVTHN
Trigger: GTTATGTGTGACTGAGGTTCACTCCCAGCATTCTGT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGTTTTTGTTTTGCCTTTaGCAGAACAGTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEFLFCL*QNSPTP
Trigger: AGGAGTTGGACTGTTCTGTCAAAGGCAAAACAAAAA...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGAGCTCTTCAGAAAAGTaGTCTACTACTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQESSSEK*STTMLC
Trigger: ACAGAGCATAGTAGTAGATCACTTTTCTGAAGAGCT...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGTTCTTTAGTAATCTCTaGTACTCGAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEFFSNL*YSKRQI
Trigger: GATCTGCCTCTTCGAGTAGCAGAGATTACTAAAGAA...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACTTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYLLLPN*RGSLGT
Trigger: AGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAA...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACCATCTAGGAGCGGGTaGTGTTTTTGTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLPSRSG*CFCGLC
Trigger: ACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACCTAGACAATATTCACTaGCTTGAGCACAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYLDNIH*LEHRTG
Trigger: CCCTGTTCTGTGCTCAAGGCAGTGAATATTGTCTAG...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGTTATGCCCAAATGGATaGATTGTAAAGAAAATCCAG +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKLCPNG*IVKKIQ
Trigger: CTGGATTTTCTTTACAATGCATCCATTTGGGCATAA...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDIIRQI*SNLTSL
Trigger: CAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTAT...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGAGTACAGTTCTTCATaGCAGGAGCCAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLEYSSS*QEPKPN
Trigger: GTTGGGTTTTGGCTCCTGCCATGAAGAACTGTACTC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CCA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACCGCAAATGCTTATATaGACCTGTGCCTACCGACAA +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRPQMLI*TCAYRQ
Trigger: TTGTCGGTAGGCACAGGTCCATATAAGCATTTGCGG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTATCTTCATCTTACACTaGAGTCAAGCAAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: FLLGIMGTVPSENTQELCIFILH*SQAKLN
Trigger: ATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGWEGIV*ISLQLT
Trigger: TGTGAGCTGCAATGAAATTCAAACTATACCTTCCCA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTTCCATAAGGGCGACTTaGGTACAGTTCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVSIRAT*VQFFMA
Trigger: TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGA...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTTGTAGGTTCATTCCCTaGCCATCTCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFCRFIP*PSLITT
Trigger: AGTGGTGATAAGAGATGGTCAGGGAATGAACCTACA...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGATGTAGGTTCATTCCCTaGCCATCTCTTATCACCACT +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRCRFIP*PSLITT
Trigger: AGTGGTGATAAGAGATGGTCAGGGAATGAACCTACA...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACTCGAAGAGGCAGATCTaGAAATTCATCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYSKRQI*KFICRF
Trigger: GAACCTACAGATGAATTTTCAGATCTGCCTCTTCGA...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTATGGCCAATACCTTTaGAACGTCCAGACCGCAAAT +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIYGQYL*NVQTAN
Trigger: ATTTGCGGTCTGGACGTTTCAAAGGTATTGGCCATA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTAAACTCAGTGTATCCTaGGCTCTTGAGAAACTTCCC +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIKLSVS*ALEKLP
Trigger: GGGAAGTTTCTCAAGAGCTCAGGATACACTGAGTTT...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKASLWI*LVLIFS
Trigger: GGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGC...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGTTTCCACATTTCGCCTaGATTTCGCCATTGTTAATT +
Preference number: 4 (lower is better)
Translates to: KIFLLGIMGTVPSENTQEFPHFA*ISPLLI
Trigger: AATTAACAATGGCGAAATGCAGGCGAAATGTGGAAA...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR GCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTCACAGCCAAGTTAGGTaGTGGGTTTTCAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAHSQVR*WVFSKR
Trigger: TCTCTTACTGAAAACCCAGCACCTAACTTGGCTGTG...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTGAGTACAGTTCTTCATaGCAGGAGCCAAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVEYSSS*QEPKPN
Trigger: GTTGGGTTTTGGCTCCTGCCATGAAGAACTGTACTC...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATT +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLRTASL*ICLVLI
Trigger: AATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCT...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATT +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIRTASL*ICLVLI
Trigger: AATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCT...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAGAGGTCGCACATGATTaGCCAAATGGCAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFREVAHD*PNGKEQ
Trigger: TTGTTCTTTGCCATTTGGCCAATCATGTGCGACCTC...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTAGAGACAGACAAAACTaGATTCTTCTGAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIRDRQN*ILLSVP
Trigger: GGGCACACTCAGAAGAATCCAGTTTTGTCTGTCTCT...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACTTCCACGCTACCAGATaGCTCAAGAGTAAAAGATAC +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYFHATR*LKSKRY
Trigger: GTATCTTTTACTCTTGAGCCATCTGGTAGCGTGGAA...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428136.2
3UTR CAA 72 bp CGGAAAAATGGCCAGATGGGAGTTGTATTGTGTGACTaGGAAATAAAGCTCTACATGTCATATTCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RKNGQMGVVLCD*EIKLYMSYSKY
Trigger: GTACTTCGAATATGACATGTAGAGCTTTATTTCCAAGTCACACAATACAACTCCCATCTGGCCATTTTTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp ATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTGAATGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: IKVSQGLQVTNLGRYSLNGKCTR*FLLTLR
Trigger: CCTTAATGTAAGAAGAAATCACCTAGTACATTTGCC...ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR TCA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGCTGGAACCCTGTTTTaGTGTAAATATCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGAGTLF*CKYLLI
Trigger: TATGAGAAGATATTTACATCAAAACAGGGTTCCAGC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTAACAATACCGCAGGGTaGAAGCAACATCCTTTATCC +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVNNTAG*KQHPLS
Trigger: GGATAAAGGATGTTGCTTTCACCCTGCGGTATTGTT...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTATACTGGGAAACTGCTaGCAGAAAATCTCTGTACGT +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAILGNC*QKISVR
Trigger: ACGTACAGAGATTTTCTGTCAGCAGTTTCCCAGTAT...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACAAACATAACTCAGCCTaGATGAGTTCTACGCTATCT +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYKHNSA*MSSTLS
Trigger: AGATAGCGTAGAACTCATGCAGGCTGAGTTATGTTT...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLIIRQI*SNLTSL
Trigger: CAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTAT...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTGATTTACCTCCTTTATaGGTTAGCTCTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVDLPPL*VSSLRA
Trigger: GGCCCTCAAAGAGCTAACCCATAAAGGAGGTAAATC...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTTTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVFYRNF*KAISRQ
Trigger: CTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAA...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTTCTTCTCTCTGTCTTaGATTCTGTCCTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: VSALIVNSLLTCENSCPIFFSLS*ILSCYG
Trigger: TCCATAACAGGACAGAATTCAAGACAGAGAGAAGAA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTACATGTGAGAAGTGTTaGCACTGTTTGCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVTCEKC*HCLLEE
Trigger: TTCCTCAAGCAAACAGTGTCAACACTTCTCACATGT...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTATTTGGAGACTGTACTaGGGCTTAATGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAIWRLY*GLMLTN
Trigger: GTTTGTCAACATTAAGCCTCAGTACAGTCTCCAAAT...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAATCATTAGTCACTGCTaGGCTGTAGAAAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKIISHC*AVESKR
Trigger: TCTCTTACTTTCTACAGCTCAGCAGTGACTAATGAT...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATTCTTTAGTAATCTCTaGTACTCGAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLFFSNL*YSKRQI
Trigger: GATCTGCCTCTTCGAGTAGCAGAGATTACTAAAGAA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR GCA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAATTCTTTAGTAATCTCTaGTACTCGAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKFFSNL*YSKRQI
Trigger: GATCTGCCTCTTCGAGTAGCAGAGATTACTAAAGAA...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACTAAACCGGATATTATaGTCCTCACAATCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRLNRIL*SSQSLF
Trigger: GAAGAGAGATTGTGAGGAGCATAATATCCGGTTTAG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACGGCAATGTTGACAGTTaGTTCCGACTAATATTTAAG +
Preference number: 4 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYGNVDS*FRLIFK
Trigger: CTTAAATATTAGTCGGAACCAACTGTCAACATTGCC...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLGKCTR*FLLTLR
Trigger: CCTTAATGTAAGAAGAAATCACCTAGTACATTTGCC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR TCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAGKCTR*FLLTLR
Trigger: CCTTAATGTAAGAAGAAATCACCTAGTACATTTGCC...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR GCA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACGCTTCCTTAATGTGTaGATCGTTAATTTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRRFLNV*IVNLLG
Trigger: ACCTAACAAATTAACGATGCACACATTAAGGAAGCG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR GCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTGTAAACCATCTCAACTaGACTGTGTATATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFVNHLN*TVYIER
Trigger: CCTTTCTATATACACAGTGCAGTTGAGATGGTTTAC...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGCAATGTTGACAGTTaGTTCCGACTAATATTTAAG +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLGNVDS*FRLIFK
Trigger: CTTAAATATTAGTCGGAACCAACTGTCAACATTGCC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTATGAGTCTGAAATACTaGGAAACTGCTGACAGAAAA +
Preference number: 4 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFMSLKY*ETADRK
Trigger: TTTTCTGTCAGCAGTTTCCCAGTATTTCAGACTCAT...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVGKCTR*FLLTLR
Trigger: CCTTAATGTAAGAAGAAATCACCTAGTACATTTGCC...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR TCA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTATGGAAGGGCCTGTCTaGATTAAAAATCTGAATTAC +
Preference number: 4 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVMEGPV*IKNLNY
Trigger: GTAATTCAGATTTTTAATTCAGACAGGCCCTTCCAT...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CCA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CCA 90 bp TTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACATAAAGACATTTATATGTTTACGCAGTTaGTCTATTAATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LVGLLGTVNIMGSYIKTFICLRS*SINSSS
Trigger: AGAGCTGGAATTAATAGACCAACTGCGTAAACATAT...AAATGTCTTTATGTAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CCA 90 bp ATCTTCATCTTACACTGGAGTCAAGCAAAGCTAAATGTTAAACCGAATTGTGCTATTACAAGAGAACACTaGAGTGCTAAACACAGATTA +
Preference number: 4 (lower is better)
Translates to: IFILHWSQAKLNVKPNCAITREH*SAKHRL
Trigger: TAATCTGTGTTTAGCACTCCAGTGTTCTCTTGTAAT...AGCACAATTCGGTTTAACATTTAGCTTTGCTTGACTCCAGTGTAAGATGAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS CCA 90 bp GCGGCTCCACGAGCCCGGGCCAAAACCAGGGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGGGAGGTTACCTCCCGACGCTACCGT +
Preference number: 5 (lower is better)
Translates to: AAPRARAKTRACPGA*AAVNTREVTSRRYR
Trigger: ACGGTAGCGTCGGGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCGTGGAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS TCA 90 bp GAGCCCGGGCCAAAACCAGGGCCTGCCCCGGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCTCCCGACGCTACCGTGCCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: EPGPKPGPAPELGPQ*TPGRLPPDATVPEY
Trigger: GTACTCTGGCACGGTAGCGTCGGGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS GCA 90 bp TTGGGCCGCAGTGAACACCAGGGAGGTTACCTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCGCTGCCACAGCGACCAAGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: LGRSEHQGGYLPTLP*QSTRQPLPQRPSPR
Trigger: CCGCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS GCA 90 bp TCGATCGAGAGAGCGGCTCCACGAGCCCGGGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCAGTGAACACCAGGGAGGTTACCTCC +
Preference number: 5 (lower is better)
Translates to: SIERAAPRARAKTRA*PGAWAAVNTREVTS
Trigger: GGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCGTGGAGCCGCTCTCTCGATCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS GCA 90 bp GAGGTTACCTCCCGACGCTACCGTGCCAGAGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGCGGCCGCCATTTCCCAGCCGACAAC +
Preference number: 5 (lower is better)
Translates to: EVTSRRYRARVLGSR*HSDQARGRHFPADN
Trigger: GTTGTCGGCTGGGAAATGGCGGCCGCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAGGTAACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGCCTGCCCCGGAGCTaGGGCCGCAGTGAACACCAG +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGGLPRS*GRSEHQ
Trigger: CTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCC...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATTCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGTCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTGGCCTGCCCCGGAGCTaGGGCCGCAGTGAACACCAG +
Preference number: 5 (lower is better)
Translates to: PPIIEYIKALVVERDGARGLPRS*GRSEHQ
Trigger: CTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCC...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp ACCGTCCTGGGGATCCTCAAACAGCAGATAACTGGTGCTGCTGTTGCTTGGGTGTCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: TVLGILKQQITGAAVAWVSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...CACCCAAGCAACAGCAGCACCAGTTATCTGCTGTTTGAGGATCCCCAGGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438796.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTCTGGGTCTGGTCCCTaGGGCTGTCTCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQSGSGP*GCLTSA
Trigger: GGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAGA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCAGTGCGGTGTGAGCCCTaGGGCCCTTTTCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: QPTATFGFQVEAILVPQPVRCEP*GPFPPP
Trigger: GGGTGGAGGAAAAGGGCCCAAGGGCTCACACCGCAC...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATGGCCTGCCCCGGAGCTaGGGCCGCAGTGAACACCAG +
Preference number: 5 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNGLPRS*GRSEHQ
Trigger: CTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCC...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGGGCCTGCCCCGGAGCTaGGGCCGCAGTGAACACCAG +
Preference number: 5 (lower is better)
Translates to: ACLCLTQKMCFLARETRLGLPRS*GRSEHQ
Trigger: CTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCC...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGTVSCS*FWPGQC
Trigger: GCACTGGCCTGGCCAAAACAAGGAACAGGACACCGT...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGTVSCS*FWPGQC
Trigger: GCACTGGCCTGGCCAAAACAAGGAACAGGACACCGT...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTGTGCGGTGTGAGCCCTaGGGCCCTTTTCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: PPIIEYIKALVVERDGARVRCEP*GPFPPP
Trigger: GGGTGGAGGAAAAGGGCCCAAGGGCTCACACCGCAC...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAGTTCCACTCCGCCGTTaGTTACTACCAAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGVPLRR*LLPNCR
Trigger: GCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAAC...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGGTTCCACTCCGCCGTTaGTTACTACCAAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: NHGVLFLVLARPVPTVLGVPLRR*LLPNCR
Trigger: GCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAAC...CCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTACTGCCGCGGTTCTCTaGGTACTGGCTTTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRTAAVL*VLAFSS
Trigger: CGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGT...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTGTTCCACTCCGCCGTTaGTTACTACCAAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRVPLRR*LLPNCR
Trigger: GCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAAC...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCTCTGGGTCTGGTCCCTaGGGCTGTCTCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSSGSGP*GCLTSA
Trigger: GGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAGA...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGACGGTGTCCTGTTCCTaGTTTTGGCCAGGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQTVSCS*FWPGQC
Trigger: GCACTGGCCTGGCCAAAACAAGGAACAGGACACCGT...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAGGTTGAAGCGATTCTaGTGCCTCAGCCACCCAAGT +
Preference number: 5 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTRLKRF*CLSHPS
Trigger: ACTTGGGTGGCTGAGGCACAAGAATCGCTTCAACCT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCTCCATAAGGGCGACTaGAGTACAGTTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGLHKGD*STVLHG
Trigger: GCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAG...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGACTCCATAAGGGCGACTaGAGTACAGTTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGLHKGD*STVLHG
Trigger: GCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAG...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGCCACTGTCCACACTATaGAAGCCTGAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGPLSTL*KPESRA
Trigger: AGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGG...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGACAGCTGATTGTGACTaGCTGATAGTGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGTADCD*LIVTGG
Trigger: CCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGT...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGCAAGGTTTCACCATGTaGGCCAGGCTGGCTTGCGTA +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQQGFTM*ARLACV
Trigger: TACGCAAGCCAGCCTGGCCAACATGGTGAAACCTTG...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCAGGTTGAAGCGATTCTaGTGCCTCAGCCACCCAAGT +
Preference number: 5 (lower is better)
Translates to: SWQQQSRCPVPCFGQASARLKRF*CLSHPS
Trigger: ACTTGGGTGGCTGAGGCACAAGAATCGCTTCAACCT...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS GCA 90 bp CTGGTCCCTTGGGCTGTCTCACCTCGGCCTCCTCTTCCTCTGCGGTaGAGCTGTCTATGTAGTCAATCTGATCCAGATCATGTTCCACTC +
Preference number: 5 (lower is better)
Translates to: LVPWAVSPRPPLPLR*SCLCSQSDPDHVPL
Trigger: GAGTGGAACATGATCTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGTGAGACAGCCCAAGGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS GCA 90 bp TGGGTCTGGTCCCTTGGGCTGTCTCACCTCGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTAGTCAATCTGATCCAGATCATGTTC +
Preference number: 5 (lower is better)
Translates to: WVWSLGLSHLGLLFL*GAAVYVVNLIQIMF
Trigger: GAACATGATCTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGTGAGACAGCCCAAGGGACCAGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS GCA 90 bp TCTCCTCCTCATACTGCAGGGCAGCAAGCTGAGCCTCTCTCCGAGTaGGCTCTACTAACTGCTCCCTTCTCTGATGAAGTTCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SPPHTAGQQAEPLSE*ALLTAPFSDEVPGL
Trigger: CAGACCTGGAACTTCATCAGAGAAGGGAGCAGTTAGTAGAGCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCAGTATGAGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000461674.5
ENST00000494069.1
CDS-3UTR CAA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: FLLGIMGTVPSENTQELCSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGCCACTGTCCACACTATaGAAGCCTGAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLPLSTL*KPESRA
Trigger: AGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGG...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCACTGTCCACACTATaGAAGCCTGAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRPLSTL*KPESRA
Trigger: AGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGG...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGSLWIC*VLIFSS
Trigger: GGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGTCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWSLWIC*VLIFSS
Trigger: GGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGA...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGAACACACAAGAGCTTaGTTTAAGCAGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWEHTRA*FKQTAG
Trigger: GCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTC...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGCCACTGTCCACACTATaGAAGCCTGAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQPLSTL*KPESRA
Trigger: AGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGG...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGAACACACAAGAGCTTaGTTTAAGCAGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPEHTRA*FKQTAG
Trigger: GCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTC...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGAACACACAAGAGCTTaGTTTAAGCAGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SWQQQSRCPVPCFGQASAEHTRA*FKQTAG
Trigger: GCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS TCA 90 bp TTCAACCCTGACAGCGACATGCACAAGGCACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAGGGGCACTCACCATCTACGCCATCT +
Preference number: 5 (lower is better)
Translates to: FNPDSDMHKALSSVC*DLLDGKGHSPSTPS
Trigger: AGATGGCGTAGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACACTGATGATAGTGCCTTGTGCATGTCGCTGTCAGGGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000452660.5
ENST00000461674.5
ENST00000481048.5
CDS-3UTR CAA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAGGCCTGCCCCGGAGCTaGGGCCGCAGTGAACACCAG +
Preference number: 5 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGGLPRS*GRSEHQ
Trigger: CTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCC...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp ATTTCTTCTTACATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: ISSYIKVSQGLQVTNLGRSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...CCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAATGTAAGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR CAA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATGTTCCACTCCGCCGTTaGTTACTACCAAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNVPLRR*LLPNCR
Trigger: GCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAAC...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQSLWIC*VLIFSS
Trigger: GGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGTGTGATGCTTTTTGTTaGACAAAGTCCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: QSRCPVPCFGQASAHRPGCDAFC*TKSRTA
Trigger: TGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACA...CCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATGTGATGCTTTTTGTTaGACAAAGTCCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGCDAFC*TKSRTA
Trigger: TGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACA...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGAACACACAAGAGCTTaGTTTAAGCAGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASEHTRA*FKQTAG
Trigger: GCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTC...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAGCAGACCAGTTGTCTaGAGACCAGGTAAAAACAAT +
Preference number: 5 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTSRPVV*RPGKNN
Trigger: ATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATCATGACCTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDHDLFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGGTCATG...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433298.5
CDS TCA 90 bp ACCCTCATGAGAGATTCGCCGCTGTTCAATATACGCCATAAACTGTaGACTAAGGCTGTCTGGGTCTGGTCCCTTGGGCTGTCTCACCTC +
Preference number: 5 (lower is better)
Translates to: TLMRDSPLFNIRHKL*TKAVWVWSLGLSHL
Trigger: GAGGTGAGACAGCCCAAGGGACCAGACCCAGACAGCCTTAGTTCACAGTTTATGGCGTATATTGAACAGCGGCGAATCTCTCATGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS TCA 90 bp AGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACATCCCGCCCGGGTGGTGTCCGTCAG +
Preference number: 5 (lower is better)
Translates to: RSLKASRLPIWEGIV*ISLQLTSRPGGVRQ
Trigger: CTGACGGACACCACCCGGGCGGGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR CAA 90 bp TCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGATCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: SRCPVPCFGQASAHRPGDLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...ATCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACTGCCGCGGTTCTCTaGGTACTGGCTTTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: LTQKMCFLARETRLLSRKTAAVL*VLAFSS
Trigger: CGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGT...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAACTGCCGCGGTTCTCTaGGTACTGGCTTTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: GTVPSENTQELCLSRQLATAAVL*VLAFSS
Trigger: CGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGT...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTGTGATGCTTTTTGTTaGACAAAGTCCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQACDAFC*TKSRTA
Trigger: TGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCTGTGATGCTTTTTGTTaGACAAAGTCCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: SWQQQSRCPVPCFGQASACDAFC*TKSRTA
Trigger: TGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACA...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp TTAAGCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: LSRQLAAAITVSCSLFWPREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...TGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGAAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp TGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: CLCLTQKMCFLARETRLLREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...GAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CAA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGGTCCTGTTCCTTGTTTaGGCCAGGCCAGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKVLFLV*ARPVPT
Trigger: GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGAC...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTCATGTGCAATGGTTGTaGAAAATGCAGATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPHVQWL*KMQIPR
Trigger: CCTAGGAATCTGCATTTTCAACAACCATTGCACATG...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS TCA 90 bp TTAGGTCTGTCATCACTCATGCACAAGGCACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAGGGGCACTCACCATCTACGCCATCT +
Preference number: 5 (lower is better)
Translates to: LGLSSLMHKALSSVC*DLLDGKGHSPSTPS
Trigger: AGATGGCGTAGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACACTGATGATAGTGCCTTGTGCATGAGTGATGACAGACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414675.6
ENST00000433298.5
CDS-3UTR CAA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALGRYS*NFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAA...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: QQSRCPVPCFGQASAHRPLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...AGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATCTGGGTCTGGTCCCTaGGGCTGTCTCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGSGSGP*GCLTSA
Trigger: GGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAGA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp GCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGCATATCTTCTGTTTTTaGAAACTCCCTAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: AITVSCSLFWPGQCPPSWHIFCF*KLPNGY
Trigger: GTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATG...CCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp AGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCGATGAACTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: SWQQQSRCPVPCFGQASADELFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGTTCATC...GGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCGATGAACTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQADELFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGTTCATC...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATTATGGGTTAGCTCTTaGAGGGCCAGCAGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGLWVSS*RASREK
Trigger: TTTCTCCCTGCTGGCCCTCAAAGAGCTAACCCATAA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCAAACATGTGCAATGGTaGTTGAAAATGCAGATTCCT +
Preference number: 5 (lower is better)
Translates to: GSSNHGVLFLVLARPVPTKHVQW*LKMQIP
Trigger: AGGAATCTGCATTTTCAACAACCATTGCACATGTTT...GGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp ATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGGGGAAAACATGTGCAATGGTaGTTGAAAATGCAGATTCCT +
Preference number: 5 (lower is better)
Translates to: ITVSCSLFWPGQCPPSWGKHVQW*LKMQIP
Trigger: AGGAATCTGCATTTTCAACAACCATTGCACATGTTT...TCCCCAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTAGGCGGGAGGATCAGTaGAGCCCAGGAGTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: FLLGIMGTVPSENTQELCRREDQ*SPGVSD
Trigger: GTCTGAAACTCCTGGGCTCAACTGATCCTCCCGCCT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS TCA 90 bp GAGATTTTCCAGAGAAACAAAGTGACATGCTTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAGGTCCGCCCGGGTGGTGTCCGTCAG +
Preference number: 5 (lower is better)
Translates to: EIFQRNKVTCFYRNF*KAISRQVRPGGVRQ
Trigger: CTGACGGACACCACCCGGGCGGACCTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAAGCATGTCACTTTGTTTCTCTGGAAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATCCGTCAGGTCGTGGTaGGCCGCTCCCCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLSVRSW*AAPRGN
Trigger: GTTTCCCCGGGGAGCGGCCAACCACGACCTGACGGA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp CAGCCCACTGCAACCTTCGGCTTCCAGGTTGAAGCGATTCTTGTGCCTCAGCCATTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: QPTATFGFQVEAILVPQPLGRYS*NFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAA...TGGCTGAGGCACAAGAATCGCTTCAACCTGGAAGCCGAAGGTTGCAGTGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTACTGCCGCGGTTCTCTaGGTACTGGCTTTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: FLLGIMGTVPSENTQELCTAAVL*VLAFSS
Trigger: CGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGT...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCATATCTTCTGTTTTTaGAAACTCCCTAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: QQQSRCPVPCFGQASAHRHIFCF*KLPNGY
Trigger: GTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATG...ACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAACAGCTGATTGTGACTaGCTGATAGTGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GTVPSENTQELCLSRQLATADCD*LIVTGG
Trigger: CCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGT...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACAGCTGATTGTGACTaGCTGATAGTGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LTQKMCFLARETRLLSRKTADCD*LIVTGG
Trigger: CCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGT...TTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp ATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCAAGTTCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MCFLARETRLLSRKTQPSSLWIC*VLIFSS
Trigger: GGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGA...ACTTGGCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGGAACACACAAGAGCTTaGTTTAAGCAGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: ACLCLTQKMCFLARETRLEHTRA*FKQTAG
Trigger: GCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTC...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000433298.5
ENST00000438796.6
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGATTTTTGTTTTGCCTTaGACAGAACAGTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQIFVLP*TEQSNS
Trigger: GGAGTTGGACTGTTCTGTCAAAGGCAAAACAAAAAT...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GCAGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCCTGTGTATAGAGGGCTaGTTGTTTATTATAATGTCC +
Preference number: 5 (lower is better)
Translates to: ADSWQQQSRCPVPCFGQALCIEG*LFIIMS
Trigger: GGACATTATAATAAACAACAAGCCCTCTATACACAG...GGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp AGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTGCCCACCGTCCTGTATCAGCTTCAGAATTaGGAAACTCTGTATAGAGAG +
Preference number: 5 (lower is better)
Translates to: SNHGVLFLVLARPVPTVLYQLQN*ETLYRE
Trigger: CTCTCTATACAGAGTTTCCAAATTCTGAAGCTGATA...CAGGACGGTGGGCACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTCAAGGTTTCACCATGTaGGCCAGGCTGGCTTGCGTA +
Preference number: 5 (lower is better)
Translates to: FLLGIMGTVPSENTQELCQGFTM*ARLACV
Trigger: TACGCAAGCCAGCCTGGCCAACATGGTGAAACCTTG...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS GCA 90 bp AAACGACTCACTTTGACAAAGTCCAGGACAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCCTCCTCATACTGCAGGGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: KRLTLTKSRTASLWI*LVLIFSSSYCRAAS
Trigger: GCTTGCTGCCCTGCAGTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAAGTGAGTCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS-3UTR CAA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAACTCCATAAGGGCGACTaGAGTACAGTTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKLHKGD*STVLHG
Trigger: GCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAG...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTTCTGGGTCTGGTCCCTaGGGCTGTCTCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: VSALIVNSLLTCENSCPISGSGP*GCLTSA
Trigger: GGCCGAGGTGAGACAGCCCAAGGGACCAGACCCAGA...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTCATATCTTCTGTTTTTaGAAACTCCCTAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: DSWQQQSRCPVPCFGQASHIFCF*KLPNGY
Trigger: GTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATG...ACTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATTTATGGCCAATACCTTaGAAACGTCCAGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNLWPIP*KRPDRK
Trigger: TTTGCGGTCTGGACGTTTCAAAGGTATTGGCCATAA...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AGACAGCTGGCAGCAGCAATCACGGTGTCCTGTTCCTTGTTTTGGCCAGGCCAGTACAAATATCTAGCTTaGAACAGTGGTTCCACTACA +
Preference number: 5 (lower is better)
Translates to: RQLAAAITVSCSLFWPGQYKYLA*NSGSTT
Trigger: TGTAGTGGAACCACTGTTCAAAGCTAGATATTTGTA...CTGGCCTGGCCAAAACAAGGAACAGGACACCGTGATTGCTGCTGCCAGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CCACCCATCATTGAGTATATAAAGGCGCTTGTGGTGGAGCGAGATGGGGCGCGTATTTTTGTTTTGCCTTaGACAGAACAGTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: PPIIEYIKALVVERDGARIFVLP*TEQSNS
Trigger: GGAGTTGGACTGTTCTGTCAAAGGCAAAACAAAAAT...ACGCGCCCCATCTCGCTCCACCACAAGCGCCTTTATATACTCAATGATGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp AAAATATTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGAGGCGGGAGGATCAGTaGAGCCCAGGAGTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: KIFLLGIMGTVPSENTQERREDQ*SPGVSD
Trigger: GTCTGAAACTCCTGGGCTCAACTGATCCTCCCGCCT...CTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCAGTTGGCCAGGCTGGCTaGCGTATGTTAAAAACAATC +
Preference number: 5 (lower is better)
Translates to: GTVPSENTQELCLSRQLAVGQAG*RMLKTI
Trigger: GATTGTTTTTAACATACGCAAGCCAGCCTGGCCAAC...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS GCA 90 bp TCTGATCCAGATCATGTTCCACTCCGCCGTTTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACTGGCTTTCTCTTCGTAGTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SDPDHVPLRRLLLPN*RGSLGTGFLFVVFV
Trigger: AACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAACATGATCTGGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACTCCATAAGGGCGACTaGAGTACAGTTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GIMGTVPSENTQELCLSRLHKGD*STVLHG
Trigger: GCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAG...TCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GGATCTCAGGACACAGTTCAAAGCAGAAATCTAAGTAACCGGGTGCGGCCAAAATCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSQDTVQSRNLSNRVRPKSLWIC*VLIFSS
Trigger: GGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGA...TTTTGGCCGCACCCGGTTACTTAGATTTCTGCTTTGAACTGTGTCCTGAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATGTGATGCTTTTTGTTaGACAAAGTCCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGCDAFC*TKSRTA
Trigger: TGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCCATGTGCAATGGTTGTaGAAAATGCAGATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSHVQWL*KMQIPR
Trigger: CCTAGGAATCTGCATTTTCAACAACCATTGCACATG...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS TCA 90 bp TTAGCCAGTCAGCAGCTTGAACAGCATCATTCAAACGACTCACTTTaGCAAAGTCCAGGACAGCATCTCTCTGGATCTGCTTGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: LASQQLEQHHSNDSL*QSPGQHLSGSAWSL
Trigger: TAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAAGTGAGTCGTTTGAATGATGCTGTTCAAGCTGCTGACTGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS CCA 90 bp TCATTCAAACGACTCACTTTGACAAAGTCCAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATTTTCTCCTCCTCATACTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SFKRLTLTKSRTASL*ICLVLIFSSSYCRA
Trigger: TGCCCTGCAGTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAAGTGAGTCGTTTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS-3UTR CAA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNLGRYS*NFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAA...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCTCCAGGAAAACACAGCTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: RRCAFWHVKHACSPGKHSLGRYS*NFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAA...GCTGTGTTTTCCTGGAGAGCAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GCATGCTTGTGCCTAACACAGAAGATGTGCTTTCTGGCACGTGAAACACGCCTGCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: ACLCLTQKMCFLARETRLLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...CAGGCGTGTTTCACGTGCCAGAAAGCACATCTTCTGTGTTAGGCACAAGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CGTGTGCAGCACATACAGCGTATAGACTGGGCTCAGAAGAGCAGTCTAGGGAATCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: RVQHIQRIDWAQKSSLGNLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...ATTCCCTAGACTGCTCTTCTGAGCCCAGTCTATACGCTGTATGTGCTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GCCCCTCTTTCCATGGGTCGTTTCCAGACCTGGCTATTACAAGAGAACACTGGAGATGAACTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: APLSMGRFQTWLLQENTGDELFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGTTCATC...TCCAGTGTTCTCTTGTAATAGCCAGGTCTGGAAACGACCCATGGAAAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACAACCTGCCCAGTGTTTaGCTGTCGGAAGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDNLPSV*LSEETC
Trigger: GCACGTCTCTTCCGACAGCAAAACACTGGGCAGGTT...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS CCA 90 bp ACTCCGCCGTTTGTTACTACCAAACTGCCGCGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTTTGTTCTTTAGTAATCTCTGCTACT +
Preference number: 5 (lower is better)
Translates to: TPPFVTTKLPRFSWY*LSLRSLCSLVISAT
Trigger: AGTAGCAGAGATTACTAAAGAACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS CCA 90 bp TGTTCCACTCCGCCGTTTGTTACTACCAAACTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGTAGTCTTTGTTCTTTAGTAATCTCT +
Preference number: 5 (lower is better)
Translates to: CSTPPFVTTKLPRFS*YWLSLRSLCSLVIS
Trigger: AGAGATTACTAAAGAACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGACATATCTTCTGTTTTTaGAAACTCCCTAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGHIFCF*KLPNGY
Trigger: GTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATG...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGREHEC*GQIEVA
Trigger: TGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp GCTGCTGCAAAGGTTCAGTCACTCCACAATTCAACACTTGTGCTGAGGCACGGATCCTTTATCCCAATTTaGTTAACAGAGTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AAAKVQSLHNSTLVLRHGSFIPI*LTEFRR
Trigger: CCTTCTGAACTCTGTTAACAAAATTGGGATAAAGGA...TCCGTGCCTCAGCACAAGTGTTGAATTGTGGAGTGACTGAACCTTTGCAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS GCA 90 bp CTTTTTAGGATTATCAACTTACTACAGCTGGTGAGGGAACATGAATaGTTGGGACAGATCGAGGTCGCACATGATTGGCCAAATGGCAAA +
Preference number: 5 (lower is better)
Translates to: LFRIINLLQLVREHE*LGQIEVAHDWPNGK
Trigger: TTTGCCATTTGGCCAATCATGTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGCTGTAGTAAGTTGATAATCCTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp GGGTATATAAGAGTTGGTGGGTCTGTTGGGAACTGTAAATATAATGGGGTCTTACTCCATAAGGGCGACTaGAGTACAGTTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GYIRVGGSVGNCKYNGVLLHKGD*STVLHG
Trigger: GCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAG...TAAGACCCCATTATATTTACAGTTCCCAACAGACCCACCAACTCTTATATACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACCCACTGTCCACACTATaGAAGCCTGAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDPLSTL*KPESRA
Trigger: AGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGG...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAACTGCCGCGGTTCTCTaGGTACTGGCTTTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLTAAVL*VLAFSS
Trigger: CGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGT...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAACTGCCGCGGTTCTCTaGGTACTGGCTTTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRTAAVL*VLAFSS
Trigger: CGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGTTCCACTCCGCCGTTaGTTACTACCAAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLVPLRR*LLPNCR
Trigger: GCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAAC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCACATATCTTCTGTTTTTaGAAACTCCCTAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: GTVPSENTQELCLSRQLAHIFCF*KLPNGY
Trigger: GTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATG...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS-3UTR CAA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGAACAGCTGATTGTGACTaGCTGATAGTGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGTADCD*LIVTGG
Trigger: CCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGT...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp GTCTTGAGACCAGGTAAAAACAATGGCACAGCATGCTTGTGCCTAACACAGAAGAGCAGACCAGTTGTCTaGAGACCAGGTAAAAACAAT +
Preference number: 5 (lower is better)
Translates to: VLRPGKNNGTACLCLTQKSRPVV*RPGKNN
Trigger: ATTGTTTTTACCTGGTCTCAAGACAACTGGTCTGCT...CTTCTGTGTTAGGCACAAGCATGCTGTGCCATTGTTTTTACCTGGTCTCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp GGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTTTAAGCAGACAGCTGGCATATCAGCTTCAGAATTaGGAAACTCTGTATAGAGAG +
Preference number: 5 (lower is better)
Translates to: GTVPSENTQELCLSRQLAYQLQN*ETLYRE
Trigger: CTCTCTATACAGAGTTTCCAAATTCTGAAGCTGATA...TGCCAGCTGTCTGCTTAAACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS TCA 90 bp ATGAATAGCCAAGGCTTTTTAGGATTATCAACTTACTACAGCTGGTaGGGGAACATGAATGCTTGGGACAGATCGAGGTCGCACATGATT +
Preference number: 5 (lower is better)
Translates to: MNSQGFLGLSTYYSW*GNMNAWDRSRSHMI
Trigger: AATCATGTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGCTGTAGTAAGTTGATAATCCTAAAAAGCCTTGGCTATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp AGACATCTTAAAAATATAACCAACCCAATTCCCCAAAGTCTGAAAGGCACCTACACAGCTGATTGTGACTaGCTGATAGTGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RHLKNITNPIPQSLKGTYTADCD*LIVTGG
Trigger: CCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGT...GTAGGTGCCTTTCAGACTTTGGGGAATTGGGTTGGTTATATTTTTAAGATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp TTCCTGTTAGGAATCATGGGAACGGTCCCTTCTGAGAACACACAAGAGCTTTGTGATGAACTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: FLLGIMGTVPSENTQELCDELFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGTTCATC...ACAAAGCTCTTGTGTGTTCTCAGAAGGGACCGTTCCCATGATTCCTAACAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425562.7
ENST00000438796.6
ENST00000441090.6
CDS TCA 90 bp AGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACATCAAGTTCCATCAAATGTCTAAGG +
Preference number: 5 (lower is better)
Translates to: RSLKASRLPIWEGIV*ISLQLTSSSIKCLR
Trigger: CCTTAGACATTTGATGGAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACTCCATAAGGGCGACTaGAGTACAGTTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLLHKGD*STVLHG
Trigger: GCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACCACTGTCCACACTATaGAAGCCTGAATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLPLSTL*KPESRA
Trigger: AGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp ATTTCTTCTTACATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: ISSYIKVSQGLQVTNLGRLGRYS*NFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAA...CCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAATGTAAGAAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLSLWIC*VLIFSS
Trigger: GGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGATGTGATGCTTTTTGTTaGACAAAGTCCAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGCDAFC*TKSRTA
Trigger: TGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACA...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAAGTTGGCCAGGCTGGCTaGCGTATGTTAAAAACAATC +
Preference number: 5 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKVGQAG*RMLKTI
Trigger: GATTGTTTTTAACATACGCAAGCCAGCCTGGCCAAC...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS-3UTR CAA 90 bp TGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGGACTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: CLSTVLNKCLMNSQGFLGLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...TCCTAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp ATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTGAATCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: IKVSQGLQVTNLGRYSLNLQVTN*GRYSLN
Trigger: ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAG...ATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS-3UTR CAA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAATGGCCAGATGGGAGTaGTATTGTGTGACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRMARWE*YCVTWK
Trigger: TTTCCAAGTCACACAATACAACTCCCATCTGGCCAT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTGTTGACACTGTTTGCTaGAGGAAGTTAAACGCTTCC +
Preference number: 5 (lower is better)
Translates to: VSALIVNSLLTCENSCPIVDTVC*RKLNAS
Trigger: GGAAGCGTTTAACTTCCTCAAGCAAACAGTGTCAAC...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp CTATGTAAGCTTAGGCAGGAACATGTTGATTACCAACATGTGAGAAGTGTTGACGTTGTATTGTGTGACTaGGAAATAAAGCTCTACATG +
Preference number: 5 (lower is better)
Translates to: LCKLRQEHVDYQHVRSVDVVLCD*EIKLYM
Trigger: CATGTAGAGCTTTATTTCCAAGTCACACAATACAAC...GTCAACACTTCTCACATGTTGGTAATCAACATGTTCCTGCCTAAGCTTACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTATTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLLGRYS*NFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAA...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTAGATGAACTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLDELFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGTTCATC...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAGATGAACTGTTTCTGTaGCAGGTGAACTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRDELFL*QVNLIE
Trigger: CTCTATTAAGTTCACCTGCAACAGAAACAGTTCATC...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGAAAACTTCCCCCTAATTaGAATAATTCATGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRKLPPN*NNSWKG
Trigger: GCCCTTCCATGAATTATTCAAATTAGGGGGAAGTTT...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp AAATGTCTGTCCACTGTGCTTAACAAATGTCTGATGAATAGCCAAGGCTTTTTACATATCTTCTGTTTTTaGAAACTCCCTAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: KCLSTVLNKCLMNSQGFLHIFCF*KLPNGY
Trigger: GTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATG...TAAAAAGCCTTGGCTATTCATCAGACATTTGTTAAGCACAGTGGACAGACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS-3UTR CAA 90 bp TGCCCTAATACTTCTCCTGCTACTGTTTCACTATTAAGAAGGTTTGAATATGTTCAGATGGGAGTTGTATaGTGTGACTTGGAAATAAAG +
Preference number: 5 (lower is better)
Translates to: CPNTSPATVSLLRRFEYVQMGVV*CDLEIK
Trigger: CTTTATTTCCAAGTCACACAATACAACTCCCATCTG...AACATATTCAAACCTTCTTAATAGTGAAACAGTAGCAGGAGAAGTATTAGGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GTTTCAGCATTAATAGTGAACAGTCTTTTGACCTGTGAAAATAGCTGTCCCATTATAGTGAACAGTCTTTaGACCTGTGAAAATAGCTGT +
Preference number: 5 (lower is better)
Translates to: VSALIVNSLLTCENSCPIIVNSL*TCENSC
Trigger: ACAGCTATTTTCACAGGTCAAAAGACTGTTCACTAT...AATGGGACAGCTATTTTCACAGGTCAAAAGACTGTTCACTATTAATGCTGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp CTCTCTTCACACTTGAGTTCATCCTTTATCCCAATTTTGTTAACAGAGTTCAGACTTTGTAGAAATACTTaGAGTGCAACTGCAAGTCTA +
Preference number: 5 (lower is better)
Translates to: LSSHLSSSFIPILLTEFRLCRNT*SATASL
Trigger: TAGACTTGCAGTTGCACTCAAAGTATTTCTACAAAG...TCTGAACTCTGTTAACAAAATTGGGATAAAGGATGAACTCAAGTGTGAAGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428136.2
CDS-3UTR CAA 90 bp GGGTTTTCAGTAAGAGAAGTTTCATCTGAGAAAACCAATGGTGTCTTCGTAAAACTGTGTATAGAGGGCTaGTTGTTTATTATAATGTCC +
Preference number: 5 (lower is better)
Translates to: GFSVREVSSEKTNGVFVKLCIEG*LFIIMS
Trigger: GGACATTATAATAAACAACAAGCCCTCTATACACAG...TTTTACGAAGACACCATTGGTTTTCTCAGATGAAACTTCTCTTACTGAAAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425562.7
ENST00000438796.6
CDS GCA 72 bp AGAGCGGCTCCACGAGCCCGGGCCAAAACCAGGGCCTaGCCCGGAGCTTGGGCCGCAGTGAACACCAGGGAG +
Preference number: 6 (lower is better)
Translates to: RAAPRARAKTRA*PGAWAAVNTRE
Trigger: CTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCGTGGAGCCGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS CAA 90 bp AGCGGCTCCACGAGCCCGGGCCAAAACCAGGGCCTGCCCCGGAGCTaGGGCCGCAGTGAACACCAGGGAGGTTACCTCCCGACGCTACCG +
Preference number: 6 (lower is better)
Translates to: SGSTSPGQNQGLPRS*GRSEHQGGYLPTLP
Trigger: CGGTAGCGTCGGGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCGTGGAGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS GCA 72 bp TCCCGACGCTACCGTGCCAGAGTACTCGGCAGCCGCTaGCACAGCGACCAAGCCCGCGGCCGCCATTTCCCA +
Preference number: 6 (lower is better)
Translates to: SRRYRARVLGSR*HSDQARGRHFP
Trigger: TGGGAAATGGCGGCCGCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS CCA 72 bp CGAGCCCGGGCCAAAACCAGGGCCTGCCCCGGAGCTTaGGCCGCAGTGAACACCAGGGAGGTTACCTCCCGA +
Preference number: 6 (lower is better)
Translates to: RARAKTRACPGA*AAVNTREVTSR
Trigger: TCGGGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS TCA 72 bp CCAAAACCAGGGCCTGCCCCGGAGCTTGGGCCGCAGTaGACACCAGGGAGGTTACCTCCCGACGCTACCGTG +
Preference number: 6 (lower is better)
Translates to: PKPGPAPELGPQ*TPGRLPPDATV
Trigger: CACGGTAGCGTCGGGAGGTAACCTCCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS GCA 72 bp AGTGAACACCAGGGAGGTTACCTCCCGACGCTACCGTaGCAGAGTACTCGGCAGCCGCTGCCACAGCGACCA +
Preference number: 6 (lower is better)
Translates to: SEHQGGYLPTLP*QSTRQPLPQRP
Trigger: TGGTCGCTGTGGCAGCGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAGGTAACCTCCCTGGTGTTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000443727.1
CDS GCA 72 bp TCCCTTGGGCTGTCTCACCTCGGCCTCCTCTTCCTCTaGGGTGCAGCTGTCTATGTAGTCAATCTGATCCAG +
Preference number: 6 (lower is better)
Translates to: SLGLSHLGLLFL*GAAVYVVNLIQ
Trigger: CTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGTGAGACAGCCCAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS TCA 72 bp CTTATTTTCTCCTCCTCATACTGCAGGGCAGCAAGCTaGGCCTCTCTCCGAGTGCGCTCTACTAACTGCTCC +
Preference number: 6 (lower is better)
Translates to: LIFSSSYCRAAS*ASLRVRSTNCS
Trigger: GGAGCAGTTAGTAGAGCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCAGTATGAGGAGGAGAAAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000461674.5
ENST00000494069.1
CDS TCA 72 bp GACAGCGACATGCACAAGGCACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAGGGGCACTCACCATCT +
Preference number: 6 (lower is better)
Translates to: DSDMHKALSSVC*DLLDGKGHSPS
Trigger: AGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACACTGATGATAGTGCCTTGTGCATGTCGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000452660.5
ENST00000461674.5
ENST00000481048.5
CDS TCA 72 bp GAAGGGGTGAAGCATGACCTTTGTTGGTTTCTGCCCTaGCACCTGCTCGGAAAAGGAAGCTTTCAGGGCGCT +
Preference number: 6 (lower is better)
Translates to: EGVKHDLCWFLP*HLLGKGSFQGA
Trigger: AGCGCCCTGAAAGCTTCCTTTTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGTCATGCTTCACCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000483442.5
CDS GCA 72 bp TGGGCTGTCTCACCTCGGCCTCCTCTTCCTCTGCGGTaGAGCTGTCTATGTAGTCAATCTGATCCAGATCAT +
Preference number: 6 (lower is better)
Translates to: WAVSPRPPLPLR*SCLCSQSDPDH
Trigger: ATGATCTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGTGAGACAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS GCA 72 bp CATACTGCAGGGCAGCAAGCTGAGCCTCTCTCCGAGTaGGCTCTACTAACTGCTCCCTTCTCTGATGAAGTT +
Preference number: 6 (lower is better)
Translates to: HTAGQQAEPLSE*ALLTAPFSDEV
Trigger: AACTTCATCAGAGAAGGGAGCAGTTAGTAGAGCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000461674.5
ENST00000494069.1
CDS CAA 90 bp AAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCACATCCCGCCCGGGTGGTGTCCGTCA +
Preference number: 6 (lower is better)
Translates to: KVSQGLQVTNLGRYS*NFIAAHIPPGWCPS
Trigger: TGACGGACACCACCCGGGCGGGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS TCA 72 bp AGAGATTCGCCGCTGTTCAATATACGCCATAAACTGTaGACTAAGGCTGTCTGGGTCTGGTCCCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RDSPLFNIRHKL*TKAVWVWSLGL
Trigger: CAGCCCAAGGGACCAGACCCAGACAGCCTTAGTTCACAGTTTATGGCGTATATTGAACAGCGGCGAATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334859.8
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS TCA 72 bp TCATCACTCATGCACAAGGCACTATCATCAGTGTGCTaGGACCTTCTGGATGGGAAGGGGCACTCACCATCT +
Preference number: 6 (lower is better)
Translates to: SSLMHKALSSVC*DLLDGKGHSPS
Trigger: AGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACACTGATGATAGTGCCTTGTGCATGAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414675.6
ENST00000433298.5
CDS GCA 72 bp TTACTGGTGAACCCTCGGCCTCCTCTTCCTCTGCGGTaGAGCTGTCTATGTAGTCAATCTGATCCAGATCAT +
Preference number: 6 (lower is better)
Translates to: LLVNPRPPLPLR*SCLCSQSDPDH
Trigger: ATGATCTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGGTTCACCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414675.6
ENST00000441090.6
CDS CAA 72 bp CAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCACATCCCGCCCGGGTGG +
Preference number: 6 (lower is better)
Translates to: QGLQVTNLGRYS*NFIAAHIPPGW
Trigger: CCACCCGGGCGGGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS TCA 72 bp CAGAGAAACAAAGTGACATGCTTCTATAGGAATTTCTaGAAGGCGATTTCGCGACAGGTCCGCCCGGGTGGT +
Preference number: 6 (lower is better)
Translates to: QRNKVTCFYRNF*KAISRQVRPGG
Trigger: ACCACCCGGGCGGACCTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAAGCATGTCACTTTGTTTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS TCA 72 bp TCCCTGACCATCTCTTATCACCACTGTCCACACTATTaGAGCCTGAATCAAGGGCTCCATAAGGGCGACTTG +
Preference number: 6 (lower is better)
Translates to: SLTISYHHCPHY*SLNQGLHKGDL
Trigger: CAAGTCGCCCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGGTGATAAGAGATGGTCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS TCA 72 bp AAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACATCCCGCCCGGGTGGT +
Preference number: 6 (lower is better)
Translates to: KASRLPIWEGIV*ISLQLTSRPGG
Trigger: ACCACCCGGGCGGGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS GCA 72 bp GATCATGTTCCACTCCGCCGTTTGTTACTACCAAACTaGCGCGGTTCTCTTGGTACTGGCTTTCTCTTCGTA +
Preference number: 6 (lower is better)
Translates to: DHVPLRRLLLPN*RGSLGTGFLFV
Trigger: TACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAACATGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS CAA 72 bp TTGACAAAGTCCAGGACAGCATCTCTCTGGATCTGCTaGGTCCTTATTTTCTCCTCCTCATACTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LTKSRTASLWIC*VLIFSSSYCRA
Trigger: TGCCCTGCAGTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000461674.5
ENST00000494069.1
CDS TCA 72 bp AAGCTGCAGAGAGAGACAGACAAAACTGGATTCTTCTaGGTGTGCCCCAAGAGAAAGGAGCGTTTCAACAGT +
Preference number: 6 (lower is better)
Translates to: KLQRETDKTGFF*VCPKRKERFNS
Trigger: ACTGTTGAAACGCTCCTTTCTCTTGGGGCACACTCAGAAGAATCCAGTTTTGTCTGTCTCTCTCTGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428136.2
ENST00000438796.6
CDS TCA 72 bp CAGCAGCTTGAACAGCATCATTCAAACGACTCACTTTaGCAAAGTCCAGGACAGCATCTCTCTGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: QQLEQHHSNDSL*QSPGQHLSGSA
Trigger: AGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAAGTGAGTCGTTTGAATGATGCTGTTCAAGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS GCA 72 bp TGTTTGACAAAGTCCAGGACAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCCTCCTCATACTGCAGG +
Preference number: 6 (lower is better)
Translates to: CLTKSRTASLWI*LVLIFSSSYCR
Trigger: CCTGCAGTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000461674.5
CDS GCA 72 bp ACTTTGACAAAGTCCAGGACAGCATCTCTCTGGATCTaGTTGGTCCTTATTTTCTCCTCCTCATACTGCAGG +
Preference number: 6 (lower is better)
Translates to: TLTKSRTASLWI*LVLIFSSSYCR
Trigger: CCTGCAGTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS CCA 72 bp CCGCCGTTTGTTACTACCAAACTGCCGCGGTTCTCTTaGTACTGGCTTTCTCTTCGTAGTCTTTGTTCTTTA +
Preference number: 6 (lower is better)
Translates to: PPFVTTKLPRFS*YWLSLRSLCSL
Trigger: TAAAGAACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS CCA 72 bp CGACTCACTTTGACAAAGTCCAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATTTTCTCCTCCTCATAC +
Preference number: 6 (lower is better)
Translates to: RLTLTKSRTASL*ICLVLIFSSSY
Trigger: GTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAAGTGAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS CAA 72 bp ATCAACTTACTACAGCTGGTGAGGGAACATGAATGCTaGGGACAGATCGAGGTCGCACATGATTGGCCAAAT +
Preference number: 6 (lower is better)
Translates to: INLLQLVREHEC*GQIEVAHDWPN
Trigger: ATTTGGCCAATCATGTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGCTGTAGTAAGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334859.8
CDS TCA 72 bp CAGAGTGAGACTCCGTCTTCAGGCAAATGTACTAGGTaGTTTCTTCTTACATTAAGGTCTCTCAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: QSETPSSGKCTR*FLLTLRSLKAS
Trigger: GGAGGCCTTGAGAGACCTTAATGTAAGAAGAAATCACCTAGTACATTTGCCTGAAGACGGAGTCTCACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493726.1
CDS TCA 72 bp TGTTATTTACAAAAGCGAGGAAGCTGGAGAGAGGTCTaGGTAACAGTTTGCATCTGCACGGGCCTTTTATGG +
Preference number: 6 (lower is better)
Translates to: CYLQKRGSWREV*VTVCICTGLLW
Trigger: CCATAAAAGGCCCGTGCAGATGCAAACTGTTACTCAGACCTCTCTCCAGCTTCCTCGCTTTTGTAAATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494069.1
CDS CCA 72 bp GCTTTTTGTTTGACAAAGTCCAGGACAGCATCTCTCTaGATCTGCTTGGTCCTTATTTTCTCCTCCTCATAC +
Preference number: 6 (lower is better)
Translates to: AFCLTKSRTASL*ICLVLIFSSSY
Trigger: GTATGAGGAGGAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAACAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
ENST00000461674.5
CDS CAA 90 bp ATTTCTTCTTACATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAATTTCATTGCAGCTCACATCCCGCCC +
Preference number: 6 (lower is better)
Translates to: ISSYIKVSQGLQVTN*GRYSLNFIAAHIPP
Trigger: GGGCGGGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAATGTAAGAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443727.1
CDS TCA 72 bp AAGACCTTATATCCACCTCCTCCCCAAACTTCCTGGTaGATTACAATAACAAGAGATACCTTAAGAGGCGTG +
Preference number: 6 (lower is better)
Translates to: KTLYPPPPQTSW*ITITRDTLRGV
Trigger: CACGCCTCTTAAGGTATCTCTTGTTATTGTAATTCACCAGGAAGTTTGGGGAGGAGGTGGATATAAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466845.1
CDS CCA 72 bp AAAACCCAACGGTCTCCTATCATAATCCGGCAGATCTaGAGCAATCTTACAAGCTTGTATGTTCAGGTATTT +
Preference number: 6 (lower is better)
Translates to: KTQRSPIIIRQI*SNLTSLYVQVF
Trigger: AAATACCTGAACATACAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTATGATAGGAGACCGTTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS CCA 72 bp TTTGTTACTACCAAACTGCCGCGGTTCTCTTGGTACTaGCTTTCTCTTCGTAGTCTTTGTTCTTTAGTAATC +
Preference number: 6 (lower is better)
Translates to: FVTTKLPRFSWY*LSLRSLCSLVI
Trigger: GATTACTAAAGAACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000441090.6
CDS CAA 72 bp CAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCACATCAAGTTCCATCAA +
Preference number: 6 (lower is better)
Translates to: QGLQVTNLGRYS*NFIAAHIKFHQ
Trigger: TTGATGGAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS CAA 72 bp TACATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAATTTCATTGCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: YIKVSQGLQVTN*GRYSLNFIAAH
Trigger: GTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
ENST00000443727.1
CDS CAA 90 bp AAGGTCTCTCAAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTaGAATTTCATTGCAGCTCACATCAAGTTCCATCAAATGTCTAAG +
Preference number: 6 (lower is better)
Translates to: KVSQGLQVTNLGRYS*NFIAAHIKFHQMSK
Trigger: CTTAGACATTTGATGGAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS TCA 72 bp AAGGCCTCCAGGTTACCAATTTGGGAAGGTATAGTTTaGATTTCATTGCAGCTCACATCAAGTTCCATCAAA +
Preference number: 6 (lower is better)
Translates to: KASRLPIWEGIV*ISLQLTSSSIK
Trigger: TTTGATGGAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6
CDS GCA 72 bp ACCTCAGCTGTTTACTGTGCAAGCAGCCATAGGCAATaGATAAACAAAAGGGACTGGCTATGTAAAAATAAA +
Preference number: 6 (lower is better)
Translates to: TSAVYCASSHRQ*INKRDWLCKNK
Trigger: TTTATTTTTACATAGCCAGTCCCTTTTGTTTATGCATTGCCTATGGCTGCTTGCACAGTAAACAGCTGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466845.1
CDS CAA 90 bp ATTTCTTCTTACATTAAGGTCTCTCAAGGCCTCCAGGTTACCAATTaGGGAAGGTATAGTTTGAATTTCATTGCAGCTCACATCAAGTTC +
Preference number: 6 (lower is better)
Translates to: ISSYIKVSQGLQVTN*GRYSLNFIAAHIKF
Trigger: GAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCTTGAGAGACCTTAATGTAAGAAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334859.8
ENST00000414675.6
ENST00000425562.7
ENST00000428136.2
ENST00000438796.6