RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPXN (Homo sapiens)

Ensembl gene IDs: ENSG00000110031

Ensembl transcript IDs: ENST00000395074.7, ENST00000528489.1, ENST00000528954.5, ENST00000529915.1, ENST00000530561.5

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGATGCACAATGGCCCTTGGGCACTGTGGCAATGCCAAGGTCCTaGAATTCCTGCTCCAGACCCCCAAGCATTGAGTCCAGGGAGGCC +
Preference number: 1 (lower is better)
Translates to: QDAQWPLGTVAMPRS*NSCSRPPSIESREA
Trigger: GGCCTCCCTGGACTCAATGCTTGGGGGTCTGGAGCAGGAATTGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 90 bp TCACCTTCCCAGCAATCGGTTTCTGGCAGGATGCACAATGGCCCTTaGGCACTGTGGCAATGCCAAGGTCCTGCAATTCCTGCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: SPSQQSVSGRMHNGP*ALWQCQGPAIPAPD
Trigger: GTCTGGAGCAGGAATTGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGGGAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 90 bp GCATGGATCACCTTCCCAGCAATCGGTTTCTGGCAGGATGCACAATaGCCCTTGGGCACTGTGGCAATGCCAAGGTCCTGCAATTCCTGC +
Preference number: 1 (lower is better)
Translates to: AWITFPAIGFWQDAQ*PLGTVAMPRSCNSC
Trigger: GCAGGAATTGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGGGAAGGTGATCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 90 bp ATGGCAGAGCGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATaGACGTCCATCCAGTTCAAAGAAGGAGCCAGTAGAAAAACTGGT +
Preference number: 1 (lower is better)
Translates to: MAERSPAVMVMELTE*TSIQFKEGASRKTG
Trigger: ACCAGTTTTTCTACTGGCTCCTTCTTTGAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACGCTCTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 90 bp TTCGACAACTGTGTCAGGCAGAAAGCACACACAAAGTGCTCAGGATaGAACTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGC +
Preference number: 1 (lower is better)
Translates to: FDNCVRQKAHTKCSG*NLYPMALIQRPVMG
Trigger: GCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGACACAGTTGTCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR TCA 90 bp ATGGGCTTGGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTTaGTCTCCCTTGCTGTGTCTCAGCTTGCTCACTGGTCTCCTCTGT +
Preference number: 1 (lower is better)
Translates to: MGLGLLILPTVRAIL*SPLLCLSLLTGLLC
Trigger: ACAGAGGAGACCAGTGAGCAAGCTGAGACACAGCAAGGGAGATCAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 90 bp AGTCGTTGGGGCAGTAGGCCAAGCCACTCCGCTCAAAGAAGGGACTaGAGCCAATCTCTTCTTTGCAATGAGTACAGACAAAATGCTCAG +
Preference number: 1 (lower is better)
Translates to: SRWGSRPSHSAQRRD*SQSLLCNEYRQNAQ
Trigger: CTGAGCATTTTGTCTGTACTCATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCTACTGCCCCAACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR TCA 90 bp CCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATaGGTACAGACAAAATGCTCAGGATGCCATGATTGCCCTAGAGCA +
Preference number: 1 (lower is better)
Translates to: PLRSKKGLEPISSLQ*VQTKCSGCHDCPRA
Trigger: TGCTCTAGGGCAATCATGGCATCCTGAGCATTTTGTCTGTACTCATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 90 bp CTCTCCTCTCTTGGTTTAAATTTTATAAGGAATCTGAAGAGGCTATaGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGT +
Preference number: 1 (lower is better)
Translates to: LSSLGLNFIRNLKRL*ISWHYSGKSLLKQG
Trigger: ACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGATTCCTTATAAAATTTAAACCAAGAGAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CAA 90 bp ATCACCTTCCCAGCAATCGGTTTCTGGCAGGATGCACAATGGCCCTaGGGCACTGTGGCAATGCCAAGGTCCTGCAATTCCTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: ITFPAIGFWQDAQWP*GTVAMPRSCNSCSR
Trigger: TCTGGAGCAGGAATTGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGGGAAGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGAAGAAGTGCTCTGGGTaGCAGGTCTGGTTCATTGCT +
Preference number: 2 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMKKCSG*QVWFIA
Trigger: AGCAATGAACCAGACCTGGCACCCAGAGCACTTCTT...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp CGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATGGACGTCCATCCAGTTCGTCAGAGCCATACTTTaGTCTCCCTTGCTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: RSPAVMVMELTEWTSIQFVRAIL*SPLLCL
Trigger: GAGACACAGCAAGGGAGATCAAAGTATGGCTCTGAC...GAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp CGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATGGACGTCCATCCAGTTCCTGGTAAGTGCTTCTTaGCAGCATCTGCTCTCACTG +
Preference number: 2 (lower is better)
Translates to: RSPAVMVMELTEWTSIQFLVSAS*QHLLSL
Trigger: CAGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAG...GAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp CGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATGGACGTCCATCCAGTTCCTCATGAAAGCCTTCTaGACCAAACACCTCTCCGCA +
Preference number: 2 (lower is better)
Translates to: RSPAVMVMELTEWTSIQFLMKAF*TKHLSA
Trigger: TGCGGAGAGGTGTTTGGTGCAGAAGGCTTTCATGAG...GAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGTTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAC +
Preference number: 2 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMFLSFS*KPSAPN
Trigger: GTTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp AAGCAGTCCCCACAAACAAAGCACTCTGGGTGCCAGACAGTGTCCATGGCTGAATGCTGTGTCTCAGCTTaGTCACTGGTCTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: KQSPQTKHSGCQTVSMAECCVSA*SLVSSV
Trigger: GACAGAGGAGACCAGTGAGCAAGCTGAGACACAGCA...TTCAGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGTGGGGACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp GAAATCCTTTCGGCAATATGGCTTCTTGTCCTTCTCATGAAAGCCTTCTGCACCCAGACCCCCAAGCATTaGGTCCAGGGAGGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: EILSAIWLLVLLMKAFCTQTPKH*VQGGLV
Trigger: CACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTG...GGTGCAGAAGGCTTTCATGAGAAGGACAAGAAGCCATATTGCCGAAAGGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CCA 90 bp GTCAGGCAGAAAGCACACACAAAGTGCTCAGGATGGAACTTGTACCCCATGGCAGCACTTTATCCAGGATaGGAGCAGCGCAGTAAGCAC +
Preference number: 2 (lower is better)
Translates to: VRQKAHTKCSGWNLYPMAALYPG*EQRSKH
Trigger: GTGCTTACTGCGCTGCTCCCATCCTGGATAAAGTGC...TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CAA 90 bp TATGGGCTTGGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTaGATCTCCCTTGCTGTGTCTCAGCTTGCTCACTGGTCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: YGLGTSHPSYCQSHT*ISLAVSQLAHWSPL
Trigger: CAGAGGAGACCAGTGAGCAAGCTGAGACACAGCAAGGGAGATCAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGTACACTGAAGGAAGATaGAAAGAGCTAAAAGTGGTA +
Preference number: 2 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMYTEGR*KELKVV
Trigger: TACCACTTTTAGCTCTTTGCATCTTCCTTCAGTGTA...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp AAGCAGTCCCCACAAACAAAGCACTCTGGGTGCCAGACAGTGTCCATGGCTGAAACAAAATGCTCAGGATaGCATGATTGCCCTAGAGCA +
Preference number: 2 (lower is better)
Translates to: KQSPQTKHSGCQTVSMAETKCSG*HDCPRA
Trigger: TGCTCTAGGGCAATCATGGCATCCTGAGCATTTTGT...TTCAGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGTGGGGACTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CCA 90 bp GTCAGGCAGAAAGCACACACAAAGTGCTCAGGATGGAACTTGTACCCCATGGCAACAAACAAAGCACTCTaGGTGCCAGACAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: VRQKAHTKCSGWNLYPMATNKAL*VPDSVH
Trigger: ATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGT...TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGTGATTGTAAGACAGTaGGCCACAGGGAAATGGGAA +
Preference number: 2 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGVIVRQ*ATGKWE
Trigger: TTCCCATTTCCCTGTGGCTCACTGTCTTACAATCAC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR GCA 90 bp ATCCTTTCGGCAATATGGCTTCTTGTCCTTCTCATGAAAGCCTTCTGCACCAAATCAGGATGCCATGATTaGCCTAGAGCATGGATCACC +
Preference number: 2 (lower is better)
Translates to: ILSAIWLLVLLMKAFCTKSGCHD*PRAWIT
Trigger: GGTGATCCATGCTCTAGGGCAATCATGGCATCCTGA...TTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAAGCCATATTGCCGAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CCA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAGTAGTTTTCCAACACTaGGCGATTGCAGCCACCACA +
Preference number: 2 (lower is better)
Translates to: SEEAMDQLALQWEELIEAVVFQH*AIAATT
Trigger: TGTGGTGGCTGCAATCGCCCAGTGTTGGAAAACTAC...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAGTGATTGTAAGACAGTaGGCCACAGGGAAATGGGAA +
Preference number: 2 (lower is better)
Translates to: SEEAMDQLALQWEELIEAVIVRQ*ATGKWE
Trigger: TTCCCATTTCCCTGTGGCTCACTGTCTTACAATCAC...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp CTTCTTTGCAATGAGTACAGACAAAATGCTCAGGATGCCATGATTGCCCTAGAGCTTCTTGCCAGCATCTaGTCTCACTGCAACCACTTT +
Preference number: 2 (lower is better)
Translates to: LLCNEYRQNAQDAMIALELLASI*SHCNHF
Trigger: AAAGTGGTTGCAGTGAGAGCAGATGCTGGCAAGAAG...CTCTAGGGCAATCATGGCATCCTGAGCATTTTGTCTGTACTCATTGCAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp CTTCTTTGCAATGAGTACAGACAAAATGCTCAGGATGCCATGATTGCCCTAGAGTGCTTGTCTGGTAAGTaGTTCTTGCCAGCATCTGCT +
Preference number: 2 (lower is better)
Translates to: LLCNEYRQNAQDAMIALECLSGK*FLPASA
Trigger: AGCAGATGCTGGCAAGAAGCACTTACCAGACAAGCA...CTCTAGGGCAATCATGGCATCCTGAGCATTTTGTCTGTACTCATTGCAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAATGCACAATGGCCCTTaGGCACTGTGGCAATGCCAA +
Preference number: 2 (lower is better)
Translates to: DQIREDMSRAITRGENGEMHNGP*ALWQCQ
Trigger: TTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCAT...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CAA 90 bp ATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTaGACAATAGGTCTTGTCATTCTGCTCCCTGAAAATGCCCTTCGA +
Preference number: 2 (lower is better)
Translates to: MDQLALQWEELIEAR*TIGLVILLPENALR
Trigger: TCGAAGGGCATTTTCAGGGAGCAGAATGACAAGACCTATTGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp GCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTTGACATACTTTGATCTCCCTTaGTGTGTCTCAGCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: AMDQLALQWEELIEARLTYFDLP*CVSACS
Trigger: TGAGCAAGCTGAGACACAGCAAGGGAGATCAAAGTA...TGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR GCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGCAATGCCAAGGTCCTaGAATTCCTGCTCCAGACCC +
Preference number: 2 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYAMPRS*NSCSRP
Trigger: GGGTCTGGAGCAGGAATTGCAGGACCTTGGCATTGC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGATCTCAATATGGGCTTaGGACTTCTCATCCTTCCTA +
Preference number: 2 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMISIWA*DFSSFL
Trigger: TAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGAT...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACTAACTCCAAGTGCTTaGTTGGAGAAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: DQIREDMSRAITRGENGELTPSA*LEKRGR
Trigger: TCTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGACAGTGTCCATGGCTaGAAGGTAGTTTTCCAACAC +
Preference number: 2 (lower is better)
Translates to: DQIREDMSRAITRGENGEDSVHG*KVVFQH
Trigger: GTGTTGGAAAACTACCTTTCAGCCATGGACACTGTC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACTAACTCCAAGTGCTTaGTTGGAGAAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGLTPSA*LEKRGR
Trigger: TCTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGATCTCAGCTTGCTCACTaGTCTCCTCTGTCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: PKKTSVGMNYASGKYICRSQLAH*SPLSCL
Trigger: TAAGCAGGACAGAGGAGACCAGTGAGCAAGCTGAGA...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTCTAACTCCAAGTGCTTaGTTGGAGAAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: KPKKTSVGMNYASGKYICLTPSA*LEKRGR
Trigger: TCTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAG...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAAAATTAGAGAAGATATaGGTAGGGCCATCACTAGAG +
Preference number: 2 (lower is better)
Translates to: DQIREDMSRAITRGENGEKLEKI*VGPSLE
Trigger: CTCTAGTGATGGCCCTACTCATATCTTCTCTAATTT...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACACTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGC +
Preference number: 2 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYTWVRT*LRNPFG
Trigger: GCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAGT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACAAATTAGAGAAGATATaGGTAGGGCCATCACTAGAG +
Preference number: 2 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYKLEKI*VGPSLE
Trigger: CTCTAGTGATGGCCCTACTCATATCTTCTCTAATTT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGGAAATGGGAAAACGTaGAAAGAAACAAGTATCAGG +
Preference number: 2 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYGNGKT*KETSIR
Trigger: CCTGATACTTGTTTCTTTTCACGTTTTCCCATTTCC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
3UTR CAA 90 bp TCTTGGTTTAAATTTTATAAGGAATCTGAAGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTTGACAATA +
Preference number: 2 (lower is better)
Translates to: SWFKFYKESEEAMDQ*ALQWEELIEARLTI
Trigger: TATTGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGATTCCTTATAAAATTTAAACCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR GCA 72 bp GGCAGGATGCACAATGGCCCTTGGGCACTGTGGCAATaGCAAGGTCCTGCAATTCCTGCTCCAGACCCCCAA +
Preference number: 3 (lower is better)
Translates to: GRMHNGPWALWQ*QGPAIPAPDPQ
Trigger: TTGGGGGTCTGGAGCAGGAATTGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 72 bp CCTAGAGCATGGATCACCTTCCCAGCAATCGGTTTCTaGCAGGATGCACAATGGCCCTTGGGCACTGTGGCA +
Preference number: 3 (lower is better)
Translates to: PRAWITFPAIGF*QDAQWPLGTVA
Trigger: TGCCACAGTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGGGAAGGTGATCCATGCTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 72 bp CGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATaGACGTCCATCCAGTTCAAAGAAGGAGCCAGTAGA +
Preference number: 3 (lower is better)
Translates to: RSPAVMVMELTE*TSIQFKEGASR
Trigger: TCTACTGGCTCCTTCTTTGAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 72 bp GGCAGTAGGCCAAGCCACTCCGCTCAAAGAAGGGACTaGAGCCAATCTCTTCTTTGCAATGAGTACAGACAA +
Preference number: 3 (lower is better)
Translates to: GSRPSHSAQRRD*SQSLLCNEYRQ
Trigger: TTGTCTGTACTCATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCTACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CCA 72 bp TGTGTCAGGCAGAAAGCACACACAAAGTGCTCAGGATaGAACTTGTACCCCATGGCACTGATACAACGGCCA +
Preference number: 3 (lower is better)
Translates to: CVRQKAHTKCSG*NLYPMALIQRP
Trigger: TGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR TCA 72 bp GGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTTaGTCTCCCTTGCTGTGTCTCAGCTTGCTCACTGGT +
Preference number: 3 (lower is better)
Translates to: GLLILPTVRAIL*SPLLCLSLLTG
Trigger: ACCAGTGAGCAAGCTGAGACACAGCAAGGGAGATCAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp AAAGTGCTCAGGATGGAACTTGTACCCCATGGCACTGATACAACGGCCAGTGATTGTCAGAGCCATACTTaGATCTCCCTTGCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: KVLRMELVPHGTDTTASDCQSHT*ISLAVS
Trigger: AGACACAGCAAGGGAGATCAAAGTATGGCTCTGACA...ATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp CTGGTTCATTGCTGTCAGCACTTTATCCAGGATGGGAGCAGCGCAGTAAGCACATATCTCAATATGGGCTaGGGACTTCTCATCCTTCCT +
Preference number: 3 (lower is better)
Translates to: LVHCCQHFIQDGSSAVSTYLNMG*GLLILP
Trigger: AGGAAGGATGAGAAGTCCCAAGCCCATATTGAGATA...TGTGCTTACTGCGCTGCTCCCATCCTGGATAAAGTGCTGACAGCAATGAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR GCA 72 bp TTCGACAACTGTGTCAGGCAGAAAGCACACACAAAGTaGTCAGGATGGAACTTGTACCCCATGGCACTGATA +
Preference number: 3 (lower is better)
Translates to: FDNCVRQKAHTK*SGWNLYPMALI
Trigger: TATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGACACAGTTGTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAATCCAACACTGGGCGATaGCAGCCACCACACTTGGGT +
Preference number: 3 (lower is better)
Translates to: DQIREDMSRAITRGENGESNTGR*QPPHLG
Trigger: ACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGGA...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp GCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTTGACATCTGGTAAGTGCTTCTaGCCAGCATCTGCTCTCACT +
Preference number: 3 (lower is better)
Translates to: AMDQLALQWEELIEARLTSGKCF*PASALT
Trigger: AGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAGA...TGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAGCCAGGTCTGGTTCATaGCTGTCAGCACTTTATCCA +
Preference number: 3 (lower is better)
Translates to: SEEAMDQLALQWEELIEAARSGS*LSALYP
Trigger: TGGATAAAGTGCTGACAGCAATGAACCAGACCTGGC...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp GCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTTGACATCTAACTCCAAGTGCTaGATTGGAGAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: AMDQLALQWEELIEARLTSNSKC*IGEERE
Trigger: CTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAGA...TGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACTCTTTAACAGTCCTTTaGGCCGGGCGCAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYSLTVL*AGRSGS
Trigger: TGAGCCACTGCGCCCGGCCAAAAGGACTGTTAAAGA...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAGATGCACAATGGCCCTaGGGCACTGTGGCAATGCCA +
Preference number: 3 (lower is better)
Translates to: PQASLFINDVSTQSCPVKDAQWP*GTVAMP
Trigger: TGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATC...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYEAMDQ*ALQWEE
Trigger: CTCTTCCCACTGTAATGCCAACTGATCCATAGCCTC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR-3UTR CAA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACTCTAACTCCAAGTGCTaGATTGGAGAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYSNSKC*IGEERE
Trigger: CTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAGA...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR CAA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAATCTAACTCCAAGTGCTaGATTGGAGAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PQASLFINDVSTQSCPVKSNSKC*IGEERE
Trigger: CTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAGA...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
3UTR-3UTR CAA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTCTAACTCCAAGTGCTaGATTGGAGAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: KPKKTSVGMNYASGKYICSNSKC*IGEERE
Trigger: CTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAGA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR CCA 72 bp AATTTTATAAGGAATCTGAAGAGGCTATGGATCAGTTaGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: NFIRNLKRLWIS*HYSGKSLLKQG
Trigger: ACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGATTCCTTATAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp GTCAGGCAGAAAGCACACACAAAGTGCTCAGGATGGAACTTGTACCCCATGGCAGGCTGCCCACACCCATaGCAGAGCGTTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VRQKAHTKCSGWNLYPMAGCPHP*QSVPRR
Trigger: CCGCCGGGGAACGCTCTGCCATGGGTGTGGGCAGCC...TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGGCAATGCCAAGGTCCTaGAATTCCTGCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMAMPRS*NSCSRP
Trigger: GGGTCTGGAGCAGGAATTGCAGGACCTTGGCATTGC...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGCCAGCAATCGGTTTCTaGCAGGATGCACAATGGCCC +
Preference number: 4 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMPAIGF*QDAQWP
Trigger: GGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGG...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CAA 72 bp CCAGCAATCGGTTTCTGGCAGGATGCACAATGGCCCTaGGGCACTGTGGCAATGCCAAGGTCCTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: PAIGFWQDAQWP*GTVAMPRSCNS
Trigger: GGAATTGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGGTAGTTTTCCAACACTaGGCGATTGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMVVFQH*AIAATT
Trigger: TGTGGTGGCTGCAATCGCCCAGTGTTGGAAAACTAC...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCACAGTCAGGTGAGCCATaGGCTCATCCAACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGQATPLKEGTGANLFFAQSGEP*AHPTEQ
Trigger: CTGCTCAGTTGGATGAGCTCATGGCTCACCTGACTG...TGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCGGCCAGTGATGGGCTaGCCACACCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGRPVMG*PHPWQS
Trigger: GCTCTGCCATGGGTGTGGGCAGCCCATCACTGGCCG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CTTGTACCCCATGGCACTGATACAACGGCCAGTGATGGGCTGCCCACACCCATGAGGCTATGGATCAGTTaGCATTACAGTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LVPHGTDTTASDGLPTPMRLWIS*HYSGKS
Trigger: GCTCTTCCCACTGTAATGCCAACTGATCCATAGCCT...CATGGGTGTGGGCAGCCCATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp AAGCAGTCCCCACAAACAAAGCACTCTGGGTGCCAGACAGTGTCCATGGCTGAACAACTGAGCAGCTGCTaGCGTTTTAGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KQSPQTKHSGCQTVSMAEQLSSC*RFRRWW
Trigger: CCACCACCTTCTAAAACGTCAGCAGCTGCTCAGTTG...TTCAGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGTGGGGACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp AGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATTTGTCTCACAGGCCGTaGGGAACAGCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: RPSHSAQRRDWSQSLLCNLSHRP*GTALAC
Trigger: ACATGCCAAAGCTGTTCCTCACGGCCTGTGAGACAA...ATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp ATCTGCTCTCACTGCAACCACTTTAGAGGTGTTCTAGAGGCTAGAACAAAGAGGCAGACCCCCAAGCATTaGGTCCAGGGAGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ICSHCNHFRGVLEARTKRQTPKH*VQGGLV
Trigger: CACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTG...CCTCTTTGTTCTAGCCTCTAGAACACCTCTAAAGTGGTTGCAGTGAGAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp AAGCAGTCCCCACAAACAAAGCACTCTGGGTGCCAGACAGTGTCCATGGCTGAATCAGGATGCCATGATTaGCCTAGAGCATGGATCACC +
Preference number: 4 (lower is better)
Translates to: KQSPQTKHSGCQTVSMAESGCHD*PRAWIT
Trigger: GGTGATCCATGCTCTAGGGCAATCATGGCATCCTGA...TTCAGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGTGGGGACTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp AGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATATGCACAATGGCCCTTaGGCACTGTGGCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: RPSHSAQRRDWSQSLLCNMHNGP*ALWQCQ
Trigger: TTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCAT...ATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp AGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATGCAGAAGAAGTGCTCTaGGTGCCAGGTCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RPSHSAQRRDWSQSLLCNAEEVL*VPGLVH
Trigger: ATGAACCAGACCTGGCACCCAGAGCACTTCTTCTGC...ATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGCGGTTTCTGGCAGGATaGACAATGGCCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMRFLAG*TMALGH
Trigger: GTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCG...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp AAGCAGTCCCCACAAACAAAGCACTCTGGGTGCCAGACAGTGTCCATGGCTGAACCAGGTCTGGTTCATTaGTGTCAGCACTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: KQSPQTKHSGCQTVSMAEPGLVH*CQHFIQ
Trigger: CTGGATAAAGTGCTGACAGCAATGAACCAGACCTGG...TTCAGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGTGGGGACTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTCAGGCAGAAAGCACACACAAAGTGCTCAGGATGGAACTTGTACCCCATGGCAAAGAAGTGCTCTGGGTaGCAGGTCTGGTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: VRQKAHTKCSGWNLYPMAKKCSG*QVWFIA
Trigger: AGCAATGAACCAGACCTGGCACCCAGAGCACTTCTT...TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGCCAACACTGGGCGATTaGAGCCACCACACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMPTLGD*SHHTWV
Trigger: CACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGG...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCGGCTGCCCACACCCATaGCAGAGCGTTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIGCPHP*QSVPRR
Trigger: CCGCCGGGGAACGCTCTGCCATGGGTGTGGGCAGCC...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
3UTR CAA 72 bp GGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTaGATCTCCCTTGCTGTGTCTCAGCTTGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: GTSHPSYCQSHT*ISLAVSQLAHW
Trigger: CCAGTGAGCAAGCTGAGACACAGCAAGGGAGATCAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCAGTCAGGTGAGCCATaGGCTCATCCAACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGQSGEP*AHPTEQ
Trigger: CTGCTCAGTTGGATGAGCTCATGGCTCACCTGACTG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp AAAGTGCTCAGGATGGAACTTGTACCCCATGGCACTGATACAACGGCCAGTGATGTCCTACATCCAAGATaGTCTTGTCTCACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: KVLRMELVPHGTDTTASDVLHPR*SCLTGR
Trigger: ACGGCCTGTGAGACAAGAGCATCTTGGATGTAGGAC...ATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCAATGCCAAGGTCCTaGAATTCCTGCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGAMPRS*NSCSRP
Trigger: GGGTCTGGAGCAGGAATTGCAGGACCTTGGCATTGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCACGGTTTCTGGCAGGATaGACAATGGCCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SEEAMDQLALQWEELIEARFLAG*TMALGH
Trigger: GTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCG...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCACCAACACTGGGCGATTaGAGCCACCACACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SEEAMDQLALQWEELIEAPTLGD*SHHTWV
Trigger: CACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGG...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACGGCCAGTGATGGGCTaGCCACACCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGRPVMG*PHPWQS
Trigger: GCTCTGCCATGGGTGTGGGCAGCCCATCACTGGCCG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGHCPEG*SVPVPP
Trigger: TGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGCCAGCAATCGGTTTCTaGCAGGATGCACAATGGCCC +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMPAIGF*QDAQWP
Trigger: GGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGG...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAACTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: VGQATPLKEGTGANLFFATWVRT*LRNPFG
Trigger: GCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAGT...TGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAGGCTGCCCACACCCATaGCAGAGCGTTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKGCPHP*QSVPRR
Trigger: CCGCCGGGGAACGCTCTGCCATGGGTGTGGGCAGCC...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAAGTGCTCAGGATGGAACTTGTACCCCATGGCACTGATACAACGGCCAGTGATAACTCCGTCTCTACTTaGCCTGCATCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KVLRMELVPHGTDTTASDNSVST*PASQSG
Trigger: ACCTGACTGAGATGCAGGCCAAGTAGAGACGGAGTT...ATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTTGTCTCACAGGCCGTaGGGAACAGCTTTGGCATGT +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMLSHRP*GTALAC
Trigger: ACATGCCAAAGCTGTTCCTCACGGCCTGTGAGACAA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395074.7
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCAACTGAGCAGCTGCTaGCGTTTTAGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGQLSSC*RFRRWW
Trigger: CCACCACCTTCTAAAACGTCAGCAGCTGCTCAGTTG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAAGTGCTCAGGATGGAACTTGTACCCCATGGCACTGATACAACGGCCAGTGATATGAGCTCATCCAACTaGGCAGCTGCTGACGTTTTA +
Preference number: 4 (lower is better)
Translates to: KVLRMELVPHGTDTTASDMSSSN*AAADVL
Trigger: TAAAACGTCAGCAGCTGCTCAGTTGGATGAGCTCAT...ATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACAGACCCCCAAGCATTaGGTCCAGGGAGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEQTPKH*VQGGLV
Trigger: CACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATTTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: RPSHSAQRRDWSQSLLCNFLSFS*KPSAPN
Trigger: GTTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...ATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCAGCATCTGCTCTCACTaGAACCTTGGCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGSICSH*NLGLHL
Trigger: GAGATGCAGGCCAAGGTTGCAGTGAGAGCAGATGCT...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR GCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGACAAAGCACTCTGGGTaGCAGACAGTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMTKHSG*QTVSMA
Trigger: AGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGT...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACGGCCAGTGATGGGCTaGCCACACCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRRPVMG*PHPWQS
Trigger: GCTCTGCCATGGGTGTGGGCAGCCCATCACTGGCCG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCTGCTGTGTCTCAGCTTaGTCACTGGTCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGCCVSA*SLVSSV
Trigger: GACAGAGGAGACCAGTGAGCAAGCTGAGACACAGCA...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp AAAGTGCTCAGGATGGAACTTGTACCCCATGGCACTGATACAACGGCCAGTGATCTTCTTGCCAGCATCTaGTCTCACTGCAACCACTTT +
Preference number: 4 (lower is better)
Translates to: KVLRMELVPHGTDTTASDLLASI*SHCNHF
Trigger: AAAGTGGTTGCAGTGAGAGCAGATGCTGGCAAGAAG...ATCACTGGCCGTTGTATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGGCCCTTGGGCACTGTaGCAATGCCAAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEGPWAL*QCQGPA
Trigger: TGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGATGCACAATGGCCCTTaGGCACTGTGGCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMMHNGP*ALWQCQ
Trigger: TTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCAT...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGCACAATGGCCCTTaGGCACTGTGGCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGMHNGP*ALWQCQ
Trigger: TTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCAT...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCACTTTATCCAGGATaGGAGCAGCGCAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGALYPG*EQRSKH
Trigger: GTGCTTACTGCGCTGCTCCCATCCTGGATAAAGTGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GAAATCCTTTCGGCAATATGGCTTCTTGTCCTTCTCATGAAAGCCTTCTGCACCTCTGGGTGCCAGGTCTaGTTCATTGCTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: EILSAIWLLVLLMKAFCTSGCQV*FIAVST
Trigger: AGTGCTGACAGCAATGAACCAGACCTGGCACCCAGA...GGTGCAGAAGGCTTTCATGAGAAGGACAAGAAGCCATATTGCCGAAAGGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCAGAAGAAGTGCTCTaGGTGCCAGGTCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGAEEVL*VPGLVH
Trigger: ATGAACCAGACCTGGCACCCAGAGCACTTCTTCTGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAGCAGTCCCCACAAACAAAGCACTCTGGGTGCCAGACAGTGTCCATGGCTGAACAGTTGGCATTACAGTaGGAAGAGCTTATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KQSPQTKHSGCQTVSMAEQLALQ*EELIEA
Trigger: TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTG...TTCAGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGTGGGGACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCTATTCATCACTGTCCTaGAGGGTGGAGCGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGYSSLS*RVERSS
Trigger: ACTGGAACGCTCCACCCTTCAGGACAGTGATGAATA...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTATTCATCACTGTCCTaGAGGGTGGAGCGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMYSSLS*RVERSS
Trigger: ACTGGAACGCTCCACCCTTCAGGACAGTGATGAATA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCTTTAGAAGGTGGTGGTaGTTCCTTTGGCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGFRRWW*FLWLLG
Trigger: GCCCAAGAGCCAAAGGAATCACCACCACCTTCTAAA...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTTTAGAAGGTGGTGGTaGTTCCTTTGGCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMFRRWW*FLWLLG
Trigger: GCCCAAGAGCCAAAGGAATCACCACCACCTTCTAAA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACAGACCCCCAAGCATTaGGTCCAGGGAGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGQTPKH*VQGGLV
Trigger: CACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACCAACACTGGGCGATTaGAGCCACCACACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEPTLGD*SHHTWV
Trigger: CACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAACGGCCAGTGATGGGCTaGCCACACCCATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKRPVMG*PHPWQS
Trigger: GCTCTGCCATGGGTGTGGGCAGCCCATCACTGGCCG...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGGATTGCCCTAGAGCATaGATCACCTTCCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMDCPRA*ITFPAI
Trigger: GATTGCTGGGAAGGTGATCCATGCTCTAGGGCAATC...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp TCTCAATATGGGCTTGGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTTGTCTCAGCTTGCTCACTaGTCTCCTCTGTCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SQYGLGTSHPSYCQSHTLSQLAH*SPLSCL
Trigger: TAAGCAGGACAGAGGAGACCAGTGAGCAAGCTGAGA...CAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACAGTCAGGTGAGCCATaGGCTCATCCAACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEQSGEP*AHPTEQ
Trigger: CTGCTCAGTTGGATGAGCTCATGGCTCACCTGACTG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACAGACCCCCAAGCATTaGGTCCAGGGAGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRQTPKH*VQGGLV
Trigger: CACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGGACAGTGTCCATGGCTaGAAGGTAGTTTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMDSVHG*KVVFQH
Trigger: GTGTTGGAAAACTACCTTTCAGCCATGGACACTGTC...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGACAGTGTCCATGGCTaGAAGGTAGTTTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGDSVHG*KVVFQH
Trigger: GTGTTGGAAAACTACCTTTCAGCCATGGACACTGTC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTGTCATTCTGCTCCCTaGAAATGCCCTTCGACAACT +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMCHSAP*KCPSTT
Trigger: AGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTTGACACTGGTAAGTGCTTCTTaGCAGCATCTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: AMDQLALQWEELIEARLTLVSAS*QHLLSL
Trigger: CAGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAG...TGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCTGCTTGTCTGGTAAGTaGTTCTTGCCAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGCLSGK*FLPASA
Trigger: AGCAGATGCTGGCAAGAAGCACTTACCAGACAAGCA...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCCAGGTCTGGTTCATTaGTGTCAGCACTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGPGLVH*CQHFIQ
Trigger: CTGGATAAAGTGCTGACAGCAATGAACCAGACCTGG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGCCAGGTCTGGTTCATTaGTGTCAGCACTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMPGLVH*CQHFIQ
Trigger: CTGGATAAAGTGCTGACAGCAATGAACCAGACCTGG...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CTTCTTTGCAATGAGTACAGACAAAATGCTCAGGATGCCATGATTGCCCTAGAGCTCATGAAAGCCTTCTaGACCAAACACCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LLCNEYRQNAQDAMIALELMKAF*TKHLSA
Trigger: TGCGGAGAGGTGTTTGGTGCAGAAGGCTTTCATGAG...CTCTAGGGCAATCATGGCATCCTGAGCATTTTGTCTGTACTCATTGCAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGCAGGGGAAGAGGAGCTaGGTTGGAATATTCATCACT +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMQGKRS*VGIFIT
Trigger: AGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTG...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ACAATAGGTCTTGTCATTCTGCTCCCTGAAAATGCCCTTCGACAACTGTGTCAGCAGGGGAAGAGGAGCTaGGTTGGAATATTCATCACT +
Preference number: 4 (lower is better)
Translates to: TIGLVILLPENALRQLCQQGKRS*VGIFIT
Trigger: AGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTG...CTGACACAGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACAAGACCTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGGCCCTTGGGCACTGTaGCAATGCCAAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYGPWAL*QCQGPA
Trigger: TGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCTCAAAGAAGGGACTaGAGCCAATCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGAQRRD*SQSLLC
Trigger: GCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGGCTCAAAGAAGGGACTaGAGCCAATCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMAQRRD*SQSLLC
Trigger: GCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGC...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAGTTGGTGGTAGTCGTTaGGGCAGTAGGCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGVGGSR*GSRPSH
Trigger: GTGGCTTGGCCTACTGCCCCAACGACTACCACCAAC...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCATGCAGCCACCACACTTaGGTGAGAACATGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: SEEAMDQLALQWEELIEACSHHT*VRTWLR
Trigger: TCTTAGCCATGTTCTCACCCAAGTGTGGTGGCTGCA...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCCAGACAGTGTCCATaGCTGAAAGGTAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGARQCP*LKGSFP
Trigger: TGGAAAACTACCTTTCAGCCATGGACACTGTCTGGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGACAAAGTGCTCAGGATaGAACTTGTACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMTKCSG*NLYPMA
Trigger: TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGT...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCACAAAGTGCTCAGGATaGAACTTGTACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGTKCSG*NLYPMA
Trigger: TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGT...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCAGGCTATGGATCAGTTaGCATTACAGTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGRLWIS*HYSGKS
Trigger: GCTCTTCCCACTGTAATGCCAACTGATCCATAGCCT...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAATCCTTTCTGGAATGCTaGTCCAGGGGAAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGESFLEC*SRGRGA
Trigger: AGCTCCTCTTCCCCTGGATCAGCATTCCAGAAAGGA...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGTGGGAAGAGCTTATTaGAGCAAGGTTGACAATAGG +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGVGRAY*SKVDNR
Trigger: CCTATTGTCAACCTTGCTTCAATAAGCTCTTCCCAC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACTTCTTGCCAGCATCTaGTCTCACTGCAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGELLASI*SHCNLG
Trigger: GCCAAGGTTGCAGTGAGAGCAGATGCTGGCAAGAAG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR GCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCCGGTTTCTGGCAGGATaGACAATGGCCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIRFLAG*TMALGH
Trigger: GTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCG...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACGGTTTCTGGCAGGATaGACAATGGCCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRRFLAG*TMALGH
Trigger: GTGCCCAAGGGCCATTGTGCATCCTGCCAGAAACCG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp AGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATTACACTGAAGGAAGATaGAAAGAGCTAAAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RPSHSAQRRDWSQSLLCNYTEGR*KELKVV
Trigger: TACCACTTTTAGCTCTTTGCATCTTCCTTCAGTGTA...ATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCTACTTTGATCTCCCTTaGTGTGTCTCAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGYFDLP*CVSACS
Trigger: TGAGCAAGCTGAGACACAGCAAGGGAGATCAAAGTA...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACTCTCACTGCAACCTTaGCCTGCATCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGELSLQP*PASQSG
Trigger: ACCTGACTGAGATGCAGGCCAAGGTTGCAGTGAGAG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGGCCCTTGGGCACTGTaGCAATGCCAAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICGPWAL*QCQGPA
Trigger: TGCAGGACCTTGGCATTGCCACAGTGCCCAAGGGCC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCGTTGGTGGTAGTCGTTaGGGCAGTAGGCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIVGGSR*GSRPSH
Trigger: GTGGCTTGGCCTACTGCCCCAACGACTACCACCAAC...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGCACTTTATCCAGGATaGGAGCAGCGCAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEALYPG*EQRSKH
Trigger: GTGCTTACTGCGCTGCTCCCATCCTGGATAAAGTGC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGGAGCTCACAGAATaGACGTCCATCCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGMELTE*TSIQFK
Trigger: TTTGAACTGGATGGACGTCCATTCTGTGAGCTCCAT...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp TCTCAATATGGGCTTGGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTTGATGGAGCTCACAGAATaGACGTCCATCCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SQYGLGTSHPSYCQSHTLMELTE*TSIQFK
Trigger: TTTGAACTGGATGGACGTCCATTCTGTGAGCTCCAT...CAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGATCCTTTCTGGAATGCTaGTCCAGGGGAAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGSFLEC*SRGRGA
Trigger: AGCTCCTCTTCCCCTGGATCAGCATTCCAGAAAGGA...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp TCTCAATATGGGCTTGGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTTGGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAA +
Preference number: 4 (lower is better)
Translates to: SQYGLGTSHPSYCQSHTLGLVLS*IERISE
Trigger: TTCGGAGATCCTTTCTATTCAGGATAACACAAGTCC...CAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACAACTGAGCAGCTGCTaGCGTTTTAGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGQLSSC*RFRRWW
Trigger: CCACCACCTTCTAAAACGTCAGCAGCTGCTCAGTTG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACCAGTCAGGTGAGCCATaGGCTCATCCAACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYQSGEP*AHPTEQ
Trigger: CTGCTCAGTTGGATGAGCTCATGGCTCACCTGACTG...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAACACCTCTCCGCAGTaGGAGCAGAAGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGNTSPQ*EQKKCS
Trigger: AGAGCACTTCTTCTGCTCTCACTGCGGAGAGGTGTT...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGGTTGACAGTGGGAAGAGCTTATTaGAGCAAGGTTGACAATAGG +
Preference number: 4 (lower is better)
Translates to: AMDQLALQWEELIEARLTVGRAY*SKVDNR
Trigger: CCTATTGTCAACCTTGCTTCAATAAGCTCTTCCCAC...TGTCAACCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGTCCTACATCCAAGATaGTCTTGTCTCACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEVLHPR*SCLTGR
Trigger: ACGGCCTGTGAGACAAGAGCATCTTGGATGTAGGAC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395074.7
ENST00000530561.5
CDS-3UTR GCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACTGGTAAGTGCTTCTTaGCAGCATCTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGELVSAS*QHLLSL
Trigger: CAGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp ATCCTTTCGGCAATATGGCTTCTTGTCCTTCTCATGAAAGCCTTCTGCACCAAAACAAAATGCTCAGGATaGCATGATTGCCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: ILSAIWLLVLLMKAFCTKTKCSG*HDCPRA
Trigger: TGCTCTAGGGCAATCATGGCATCCTGAGCATTTTGT...TTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAAGCCATATTGCCGAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAACCAACACTGGGCGATTaGAGCCACCACACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKPTLGD*SHHTWV
Trigger: CACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGG...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRHCPEG*SVPVPP
Trigger: TGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACTCTCACTGCAACCTTaGCCTGCATCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGLSLQP*PASQSG
Trigger: ACCTGACTGAGATGCAGGCCAAGGTTGCAGTGAGAG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAATGCACAATGGCCCTTaGGCACTGTGGCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGMHNGP*ALWQCQ
Trigger: TTGGCATTGCCACAGTGCCCAAGGGCCATTGTGCAT...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCCCAGCAATCGGTTTCTaGCAGGATGCACAATGGCCC +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIPAIGF*QDAQWP
Trigger: GGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGG...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACCAGCAATCGGTTTCTaGCAGGATGCACAATGGCCC +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRPAIGF*QDAQWP
Trigger: GGGCCATTGTGCATCCTGCCAGAAACCGATTGCTGG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGATTGCCCTAGAGCATaGATCACCTTCCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEDCPRA*ITFPAI
Trigger: GATTGCTGGGAAGGTGATCCATGCTCTAGGGCAATC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGTTGGTGGTAGTCGTTaGGGCAGTAGGCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICVGGSR*GSRPSH
Trigger: GTGGCTTGGCCTACTGCCCCAACGACTACCACCAAC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGATCTGGGTGCCAGGTCTaGTTCATTGCTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGSGCQV*FIAVST
Trigger: AGTGCTGACAGCAATGAACCAGACCTGGCACCCAGA...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATCCTTTCGGCAATATaGCTTCTTGTCCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGILSAI*LLVLLM
Trigger: CATGAGAAGGACAAGAAGCCATATTGCCGAAAGGAT...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGATCCTTTCGGCAATATaGCTTCTTGTCCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMILSAI*LLVLLM
Trigger: CATGAGAAGGACAAGAAGCCATATTGCCGAAAGGAT...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAACCAAGGCAAGTCTaGGCAGTTACGCAGACACCC +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGKPRQV*AVTQTP
Trigger: GGGTGTCTGCGTAACTGCCCAGACTTGCCTTGGTTT...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS-3UTR TCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCAGCTTTGGCATGTGCTaGAGAAGAGGACCGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYISFGMC*RRGPQR
Trigger: CCTTTGCGGTCCTCTTCTTCAGCACATGCCAAAGCT...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395074.7
CDS-3UTR TCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACAACTGAGCAGCTGCTaGCGTTTTAGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRQLSSC*RFRRWW
Trigger: CCACCACCTTCTAAAACGTCAGCAGCTGCTCAGTTG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAAACACCTCTCCGCAGTaGGAGCAGAAGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRNTSPQ*EQKKCS
Trigger: AGAGCACTTCTTCTGCTCTCACTGCGGAGAGGTGTT...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGGAAATGGGAAAACGTaGAAAGAAACAAGTATCAGG +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGGNGKT*KETSIR
Trigger: CCTGATACTTGTTTCTTTTCACGTTTTCCCATTTCC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCTAAAAGTGGTATCATaGTTCCACAGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGLKVVS*FHSSDC
Trigger: ACAATCACTGCTGTGGAATCATGATACCACTTTTAG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCAGCATCTGCTCTCACTaGAACCTTGGCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYISICSH*NLGLHL
Trigger: GAGATGCAGGCCAAGGTTGCAGTGAGAGCAGATGCT...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR GCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACTGGTAAGTGCTTCTTaGCAGCATCTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGLVSAS*QHLLSL
Trigger: CAGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAATGCTTGTCTGGTAAGTaGTTCTTGCCAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGECLSGK*FLPASA
Trigger: AGCAGATGCTGGCAAGAAGCACTTACCAGACAAGCA...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGCAATGCCAAGGTCCTaGAATTCCTGCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICAMPRS*NSCSRP
Trigger: GGGTCTGGAGCAGGAATTGCAGGACCTTGGCATTGC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCACAAAGCACTCTGGGTaGCAGACAGTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYITKHSG*QTVSMA
Trigger: AGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGT...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACACAAAGCACTCTGGGTaGCAGACAGTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYTKHSG*QTVSMA
Trigger: AGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAACAAAGCACTCTGGGTaGCAGACAGTGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRTKHSG*QTVSMA
Trigger: AGCCATGGACACTGTCTGGCACCCAGAGTGCTTTGT...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACGTGAGGAACAGCTTTaGCATGTGCTGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGREEQL*HVLKKR
Trigger: CCTCTTCTTCAGCACATGCCAAAGCTGTTCCTCACG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395074.7
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTCACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICHCPEG*SVPVPP
Trigger: TGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTG...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACTCTCACTGCAACCTTaGCCTGCATCTCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRLSLQP*PASQSG
Trigger: ACCTGACTGAGATGCAGGCCAAGGTTGCAGTGAGAG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAGCACTTTATCCAGGATaGGAGCAGCGCAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRALYPG*EQRSKH
Trigger: GTGCTTACTGCGCTGCTCCCATCCTGGATAAAGTGC...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGATCTGGGTGCCAGGTCTaGTTCATTGCTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRSGCQV*FIAVST
Trigger: AGTGCTGACAGCAATGAACCAGACCTGGCACCCAGA...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAGTAGTTTTCCAACACTaGGCGATTGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGVVFQH*AIAATT
Trigger: TGTGGTGGCTGCAATCGCCCAGTGTTGGAAAACTAC...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGCCAGACAGTGTCCATaGCTGAAAGGTAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEARQCP*LKGSFP
Trigger: TGGAAAACTACCTTTCAGCCATGGACACTGTCTGGC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAACAAACAAAGCACTCTaGGTGCCAGACAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGETNKAL*VPDSVH
Trigger: ATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGT...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATCTGAAGAGGCTATaGATCAGTTGGCATTACAGT +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMNLKRL*ISWHYS
Trigger: ACTGTAATGCCAACTGATCCATAGCCTCTTCAGATT...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATCTGCTCTCACTGCAACCACTTTAGAGGTGTTCTAGAGGCTAGAACAAAGAGGAATCTGAAGAGGCTATaGATCAGTTGGCATTACAGT +
Preference number: 4 (lower is better)
Translates to: ICSHCNHFRGVLEARTKRNLKRL*ISWHYS
Trigger: ACTGTAATGCCAACTGATCCATAGCCTCTTCAGATT...CCTCTTTGTTCTAGCCTCTAGAACACCTCTAAAGTGGTTGCAGTGAGAGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAAAACCAAGGCAAGTCTaGGCAGTTACGCAGACACCC +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRKPRQV*AVTQTP
Trigger: GGGTGTCTGCGTAACTGCCCAGACTTGCCTTGGTTT...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGATGTAGACATGAACGCTaGCTAGCCAGTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRCRHER*LASPRG
Trigger: TCCTCTGGGACTGGCTAGCCAGCGTTCATGTCTACA...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCGATTCCTTTGGCTCTTaGGCTTCACGGCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIDSFGS*ASRQGT
Trigger: AGTCCCTTGCCGTGAAGCCCAAGAGCCAAAGGAATC...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528489.1
3UTR CAA 72 bp CTAGAACAAAGAGGCAGATTTTATCTCAATATGGGCTaGGGACTTCTCATCCTTCCTACTGTCAGAGCCATA +
Preference number: 4 (lower is better)
Translates to: LEQRGRFYLNMG*GLLILPTVRAI
Trigger: TATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGATAAAATCTGCCTCTTTGTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTCCTTTCTGGAATGCTaGTCCAGGGGAAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICSFLEC*SRGRGA
Trigger: AGCTCCTCTTCCCCTGGATCAGCATTCCAGAAAGGA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTTTAGAAGGTGGTGGTaGTTCCTTTGGCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIFRRWW*FLWLLG
Trigger: GCCCAAGAGCCAAAGGAATCACCACCACCTTCTAAA...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAATGAGCTCATCCAACTaGGCAGCTGCTGACGTTTTA +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGMSSSN*AAADVL
Trigger: TAAAACGTCAGCAGCTGCTCAGTTGGATGAGCTCAT...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAACACCTCTCCGCAGTaGGAGCAGAAGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICNTSPQ*EQKKCS
Trigger: AGAGCACTTCTTCTGCTCTCACTGCGGAGAGGTGTT...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAATTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEFLSFS*KPSAPN
Trigger: GTTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGTGGGAAGAGCTTATTaGAGCAAGGTTGACAATAGG +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEVGRAY*SKVDNR
Trigger: CCTATTGTCAACCTTGCTTCAATAAGCTCTTCCCAC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CTTCTTTGCAATGAGTACAGACAAAATGCTCAGGATGCCATGATTGCCCTAGAGGGAAATGGGAAAACGTaGAAAGAAACAAGTATCAGG +
Preference number: 4 (lower is better)
Translates to: LLCNEYRQNAQDAMIALEGNGKT*KETSIR
Trigger: CCTGATACTTGTTTCTTTTCACGTTTTCCCATTTCC...CTCTAGGGCAATCATGGCATCCTGAGCATTTTGTCTGTACTCATTGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAGTGATTGTAAGACAGTaGGCCACAGGGAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGVIVRQ*ATGKWE
Trigger: TTCCCATTTCCCTGTGGCTCACTGTCTTACAATCAC...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCGTCAGAGCCATACTTTaGTCTCCCTTGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIVRAIL*SPLLCL
Trigger: GAGACACAGCAAGGGAGATCAAAGTATGGCTCTGAC...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR GCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCCTGGTAAGTGCTTCTTaGCAGCATCTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYILVSAS*QHLLSL
Trigger: CAGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAG...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAAAGAAGTGCTCTGGGTaGCAGGTCTGGTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRKKCSG*QVWFIA
Trigger: AGCAATGAACCAGACCTGGCACCCAGAGCACTTCTT...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACCTCATGAAAGCCTTCTaGACCAAACACCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYLMKAF*TKHLSA
Trigger: TGCGGAGAGGTGTTTGGTGCAGAAGGCTTTCATGAG...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCCTCATGAAAGCCTTCTaGACCAAACACCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYILMKAF*TKHLSA
Trigger: TGCGGAGAGGTGTTTGGTGCAGAAGGCTTTCATGAG...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTACACTGAAGGAAGATaGAAAGAGCTAAAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMYTEGR*KELKVV
Trigger: TACCACTTTTAGCTCTTTGCATCTTCCTTCAGTGTA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAATCTGGGTGCCAGGTCTaGTTCATTGCTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKSGCQV*FIAVST
Trigger: AGTGCTGACAGCAATGAACCAGACCTGGCACCCAGA...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGCAGAAGAAGTGCTCTaGGTGCCAGGTCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICAEEVL*VPGLVH
Trigger: ATGAACCAGACCTGGCACCCAGAGCACTTCTTCTGC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGCAGCCACCACACTTaGGTGAGAACATGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYICSHHT*VRTWLR
Trigger: TCTTAGCCATGTTCTCACCCAAGTGTGGTGGCTGCA...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAGTAGTTTTCCAACACTaGGCGATTGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRVVFQH*AIAATT
Trigger: TGTGGTGGCTGCAATCGCCCAGTGTTGGAAAACTAC...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTGTAGACATGAACGCTaGCTAGCCAGTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICCRHER*LASPRG
Trigger: TCCTCTGGGACTGGCTAGCCAGCGTTCATGTCTACA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTTTAGAAGGTGGTGGTaGTTCCTTTGGCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICFRRWW*FLWLLG
Trigger: GCCCAAGAGCCAAAGGAATCACCACCACCTTCTAAA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACTGTCATTCTGCTCCCTaGAAATGCCCTTCGACAACT +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYCHSAP*KCPSTT
Trigger: AGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACA...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACCTAACTCCAAGTGCTTaGTTGGAGAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYLTPSA*LEKRGR
Trigger: TCTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAG...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCCTAACTCCAAGTGCTTaGTTGGAGAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYILTPSA*LEKRGR
Trigger: TCTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAG...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAGTGATTGTAAGACAGTaGGCCACAGGGAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRVIVRQ*ATGKWE
Trigger: TTCCCATTTCCCTGTGGCTCACTGTCTTACAATCAC...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGATGCTTGTCTGGTAAGTaGTTCTTGCCAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRCLSGK*FLPASA
Trigger: AGCAGATGCTGGCAAGAAGCACTTACCAGACAAGCA...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTCAGGATGCCATGATTaGCCTAGAGCATGGATCACC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICSGCHD*PRAWIT
Trigger: GGTGATCCATGCTCTAGGGCAATCATGGCATCCTGA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAATCAGGATGCCATGATTaGCCTAGAGCATGGATCACC +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKSGCHD*PRAWIT
Trigger: GGTGATCCATGCTCTAGGGCAATCATGGCATCCTGA...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAAAGAAGTGCTCTGGGTaGCAGGTCTGGTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKKKCSG*QVWFIA
Trigger: AGCAATGAACCAGACCTGGCACCCAGAGCACTTCTT...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAACTCATGAAAGCCTTCTaGACCAAACACCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKLMKAF*TKHLSA
Trigger: TGCGGAGAGGTGTTTGGTGCAGAAGGCTTTCATGAG...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACAGGGGAAGAGGAGCTaGGTTGGAATATTCATCACT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRQGKRS*VGIFIT
Trigger: AGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACCAGGGGAAGAGGAGCTaGGTTGGAATATTCATCACT +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYQGKRS*VGIFIT
Trigger: AGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTG...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGATTGCCCTAGAGCATaGATCACCTTCCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICDCPRA*ITFPAI
Trigger: GATTGCTGGGAAGGTGATCCATGCTCTAGGGCAATC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAATCCTTTCGGCAATATaGCTTCTTGTCCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEILSAI*LLVLLM
Trigger: CATGAGAAGGACAAGAAGCCATATTGCCGAAAGGAT...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAATGCAGCCACCACACTTaGGTGAGAACATGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKCSHHT*VRTWLR
Trigger: TCTTAGCCATGTTCTCACCCAAGTGTGGTGGCTGCA...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTGCAGCCACCACACTTaGGTGAGAACATGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICCSHHT*VRTWLR
Trigger: TCTTAGCCATGTTCTCACCCAAGTGTGGTGGCTGCA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAGTAGTTTTCCAACACTaGGCGATTGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKVVFQH*AIAATT
Trigger: TGTGGTGGCTGCAATCGCCCAGTGTTGGAAAACTAC...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGCCAGACAGTGTCCATaGCTGAAAGGTAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYARQCP*LKGSFP
Trigger: TGGAAAACTACCTTTCAGCCATGGACACTGTCTGGC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACACAAACAAAGCACTCTaGGTGCCAGACAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYTNKAL*VPDSVH
Trigger: ATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACACAAAGTGCTCAGGATaGAACTTGTACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYTKCSG*NLYPMA
Trigger: TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACAGTTGGCATTACAGTaGGAAGAGCTTATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEQLALQ*EELIEA
Trigger: TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAATCTCAATATGGGCTTaGGACTTCTCATCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGEISIWA*DFSSFL
Trigger: TAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGAT...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAA +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGGLVLS*IERISE
Trigger: TTCGGAGATCCTTTCTATTCAGGATAACACAAGTCC...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAATGAGCTCATCCAACTaGGCAGCTGCTGACGTTTTA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKMSSSN*AAADVL
Trigger: TAAAACGTCAGCAGCTGCTCAGTTGGATGAGCTCAT...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTATGAGCTCATCCAACTaGGCAGCTGCTGACGTTTTA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICMSSSN*AAADVL
Trigger: TAAAACGTCAGCAGCTGCTCAGTTGGATGAGCTCAT...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACTTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYFLSFS*KPSAPN
Trigger: GTTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGACAGTGTCCATGGCTaGAAGGTAGTTTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICDSVHG*KVVFQH
Trigger: GTGTTGGAAAACTACCTTTCAGCCATGGACACTGTC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTGTCATTCTGCTCCCTaGAAATGCCCTTCGACAACT +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICCHSAP*KCPSTT
Trigger: AGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGTGGGAAGAGCTTATTaGAGCAAGGTTGACAATAGG +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYVGRAY*SKVDNR
Trigger: CCTATTGTCAACCTTGCTTCAATAAGCTCTTCCCAC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAACTAACTCCAAGTGCTTaGTTGGAGAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKLTPSA*LEKRGR
Trigger: TCTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAG...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGTGATTGTAAGACAGTaGGCCACAGGGAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICVIVRQ*ATGKWE
Trigger: TTCCCATTTCCCTGTGGCTCACTGTCTTACAATCAC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAACAAAATGCTCAGGATaGCATGATTGCCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRTKCSG*HDCPRA
Trigger: TGCTCTAGGGCAATCATGGCATCCTGAGCATTTTGT...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCACAAAATGCTCAGGATaGCATGATTGCCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: EKPKKTSVGMNYASGKYITKCSG*HDCPRA
Trigger: TGCTCTAGGGCAATCATGGCATCCTGAGCATTTTGT...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAACCAGGTCTGGTTCATTaGTGTCAGCACTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKPGLVH*CQHFIQ
Trigger: CTGGATAAAGTGCTGACAGCAATGAACCAGACCTGG...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGAAGAGGAGCTGGGTTaGAATATTCATCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYEEELG*NIHHCP
Trigger: AGGACAGTGATGAATATTCCAACCCAGCTCCTCTTC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGCTCAAAGAAGGGACTaGAGCCAATCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICAQRRD*SQSLLC
Trigger: GCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAGCTCAAAGAAGGGACTaGAGCCAATCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKAQRRD*SQSLLC
Trigger: GCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGC...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAATCCTTTCGGCAATATaGCTTCTTGTCCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGILSAI*LLVLLM
Trigger: CATGAGAAGGACAAGAAGCCATATTGCCGAAAGGAT...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAACTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRTWVRT*LRNPFG
Trigger: GCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAGT...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAACAAACAAAGCACTCTaGGTGCCAGACAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKTNKAL*VPDSVH
Trigger: ATGGACACTGTCTGGCACCCAGAGTGCTTTGTTTGT...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATGGAGCTCACAGAATaGACGTCCATCCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYMELTE*TSIQFK
Trigger: TTTGAACTGGATGGACGTCCATTCTGTGAGCTCCAT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTACAAAGTGCTCAGGATaGAACTTGTACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICTKCSG*NLYPMA
Trigger: TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGT...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACAGTTGGCATTACAGTaGGAAGAGCTTATTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGQLALQ*EELIEA
Trigger: TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGGCTATGGATCAGTTaGCATTACAGTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICRLWIS*HYSGKS
Trigger: GCTCTTCCCACTGTAATGCCAACTGATCCATAGCCT...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAAATCTGAAGAGGCTATaGATCAGTTGGCATTACAGT +
Preference number: 4 (lower is better)
Translates to: DQIREDMSRAITRGENGENLKRL*ISWHYS
Trigger: ACTGTAATGCCAACTGATCCATAGCCTCTTCAGATT...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAATTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKFLSFS*KPSAPN
Trigger: GTTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACTAAAAGTGGTATCATaGTTCCACAGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGLKVVS*FHSSDC
Trigger: ACAATCACTGCTGTGGAATCATGATACCACTTTTAG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTACAAAATGCTCAGGATaGCATGATTGCCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICTKCSG*HDCPRA
Trigger: TGCTCTAGGGCAATCATGGCATCCTGAGCATTTTGT...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAACTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKTWVRT*LRNPFG
Trigger: GCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAGT...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAATGGAGCTCACAGAATaGACGTCCATCCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKMELTE*TSIQFK
Trigger: TTTGAACTGGATGGACGTCCATTCTGTGAGCTCCAT...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAGATTTTATCTCAATATaGGCTTGGGACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGDFISI*AWDFSS
Trigger: GGATGAGAAGTCCCAAGCCCATATTGAGATAAAATC...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530561.5
3UTR CAA 72 bp AAATTTTATAAGGAATCTGAAGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAGCTTATTGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KFYKESEEAMDQ*ALQWEELIEAR
Trigger: CCTTGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGATTCCTTATAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR TCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAA +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKGLVLS*IERISE
Trigger: TTCGGAGATCCTTTCTATTCAGGATAACACAAGTCC...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAA +
Preference number: 4 (lower is better)
Translates to: KPKKTSVGMNYASGKYICGLVLS*IERISE
Trigger: TTCGGAGATCCTTTCTATTCAGGATAACACAAGTCC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACTAAAAGTGGTATCATaGTTCCACAGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRLKVVS*FHSSDC
Trigger: ACAATCACTGCTGTGGAATCATGATACCACTTTTAG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CCA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACAATCTGAAGAGGCTATaGATCAGTTGGCATTACAGT +
Preference number: 4 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYNLKRL*ISWHYS
Trigger: ACTGTAATGCCAACTGATCCATAGCCTCTTCAGATT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR TCA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAAAAATTAGAGAAGATATaGGTAGGGCCATCACTAGAG +
Preference number: 4 (lower is better)
Translates to: PQASLFINDVSTQSCPVKKLEKI*VGPSLE
Trigger: CTCTAGTGATGGCCCTACTCATATCTTCTCTAATTT...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR GCA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGATACACTGAAGGAAGATaGAAAGAGCTAAAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: PKKTSVGMNYASGKYICRYTEGR*KELKVV
Trigger: TACCACTTTTAGCTCTTTGCATCTTCCTTCAGTGTA...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS CCA 90 bp AGCCAGTCCCAGAGGAGGTGTCATCTGACCAAACCAAGGCAAGTCTaGGCAGTTACGCAGACACCCCGAGAAAGGTACGCCAACGCCCAG +
Preference number: 5 (lower is better)
Translates to: SQSQRRCHLTKPRQV*AVTQTPRERYANAQ
Trigger: CTGGGCGTTGGCGTACCTTTCTCGGGGTGTCTGCGTAACTGCCCAGACTTGCCTTGGTTTGGTCAGATGACACCTCCTCTGGGACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CAA 90 bp CGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATGGACGTCCATCCAGTTCTCCAACACTGGGCGATaGCAGCCACCACACTTGGGT +
Preference number: 5 (lower is better)
Translates to: RSPAVMVMELTEWTSIQFSNTGR*QPPHLG
Trigger: ACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGGA...GAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS TCA 90 bp TGTAGACATGAACGCTGGCTAGCCAGTCCCAGAGGAGGTGTCATCTaGCCAAACCAAGGCAAGTCTGGGCAGTTACGCAGACACCCCGAG +
Preference number: 5 (lower is better)
Translates to: CRHERWLASPRGGVI*PNQGKSGQLRRHPE
Trigger: CTCGGGGTGTCTGCGTAACTGCCCAGACTTGCCTTGGTTTGGTCAGATGACACCTCCTCTGGGACTGGCTAGCCAGCGTTCATGTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CAA 90 bp CGTTCCCCGGCGGTGATGGTAATGGAGCTCACAGAATGGACGTCCATCCAGTTCGCCAGGTCTGGTTCATaGCTGTCAGCACTTTATCCA +
Preference number: 5 (lower is better)
Translates to: RSPAVMVMELTEWTSIQFARSGS*LSALYP
Trigger: TGGATAAAGTGCTGACAGCAATGAACCAGACCTGGC...GAACTGGATGGACGTCCATTCTGTGAGCTCCATTACCATCACCGCCGGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS TCA 90 bp GATGCTCTTGTCTCACAGGCCGTGAGGAACAGCTTTGGCATGTGCTaGAGAAGAGGACCGCAAAGGAACTGGATGAGACAGCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: DALVSQAVRNSFGMC*RRGPQRNWMRQHKA
Trigger: TGCCTTATGCTGTCTCATCCAGTTCCTTTGCGGTCCTCTTCTTCAGCACATGCCAAAGCTGTTCCTCACGGCCTGTGAGACAAGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529915.1
CDS CCA 90 bp GGGGAAGAGGAGCTGGGTTGGAATATTCATCACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCAATAAGGCATCGGAAGACGAGATCA +
Preference number: 5 (lower is better)
Translates to: GEEELGWNIHHCPEG*SVPVPPIRHRKTRS
Trigger: TGATCTCGTCTTCCGATGCCTTATTGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTCCTCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528954.5
CDS-3UTR CAA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCCCAGACCCCCAAGCATaGAGTCCAGGGAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGPDPQA*SPGRPC
Trigger: ACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTGG...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS CCA 90 bp AAGGTTAGTCTCCTTTCTGGAATGCTGATCCAGGGGAAGAGGAGCTaGGTTGGAATATTCATCACTGTCCTGAAGGGTGGAGCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KVSLLSGMLIQGKRS*VGIFITVLKGGAFQ
Trigger: CTGGAACGCTCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTGGATCAGCATTCCAGAAAGGAGACTAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000529915.1
ENST00000530561.5
CDS CCA 90 bp CTACATCCAAGATGCTCTTGTCTCACAGGCCGTGAGGAACAGCTTTaGCATGTGCTGAAGAAGAGGACCGCAAAGGAACTGGATGAGACA +
Preference number: 5 (lower is better)
Translates to: LHPRCSCLTGREEQL*HVLKKRTAKELDET
Trigger: TGTCTCATCCAGTTCCTTTGCGGTCCTCTTCTTCAGCACATGCCAAAGCTGTTCCTCACGGCCTGTGAGACAAGAGCATCTTGGATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529915.1
CDS-3UTR CAA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCTCTCACTGCAACCTaGGCCTGCATCTCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGALTAT*ACISVR
Trigger: CCTGACTGAGATGCAGGCCAAGGTTGCAGTGAGAGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CAA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGGATGCACAATGGCCCTaGGGCACTGTGGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMDAQWP*GTVAMP
Trigger: TGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATC...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGATGCACAATGGCCCTaGGGCACTGTGGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGDAQWP*GTVAMP
Trigger: TGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp ACAATAGGTCTTGTCATTCTGCTCCCTGAAAATGCCCTTCGACAACTGTGTCAGGATGCACAATGGCCCTaGGGCACTGTGGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: TIGLVILLPENALRQLCQDAQWP*GTVAMP
Trigger: TGGCATTGCCACAGTGCCCAAGGGCCATTGTGCATC...CTGACACAGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACAAGACCTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp GTCAGGCAGAAAGCACACACAAAGTGCTCAGGATGGAACTTGTACCCCATGGCAGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VRQKAHTKCSGWNLYPMAEAMDQ*ALQWEE
Trigger: CTCTTCCCACTGTAATGCCAACTGATCCATAGCCTC...TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS CCA 90 bp GGGGAAGAGGAGCTGGGTTGGAATATTCATCACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCAATAAGGCATCTAACTCTTCCATTG +
Preference number: 5 (lower is better)
Translates to: GEEELGWNIHHCPEG*SVPVPPIRHLTLPL
Trigger: CAATGGAAGAGTTAGATGCCTTATTGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTCCTCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000529915.1
ENST00000530561.5
CDS-3UTR CAA 90 bp GTCAGGCAGAAAGCACACACAAAGTGCTCAGGATGGAACTTGTACCCCATGGCATTGAGCTCCTGGATATaGGTAGTATACACGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VRQKAHTKCSGWNLYPMALSSWI*VVYTSC
Trigger: GCAGCTCGTGTATACTACCAATATCCAGGAGCTCAA...TGCCATGGGGTACAAGTTCCATCCTGAGCACTTTGTGTGTGCTTTCTGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTCTTTAACAGTCCTTTaGGCCGGGCGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMSLTVL*AGRSGS
Trigger: TGAGCCACTGCGCCCGGCCAAAAGGACTGTTAAAGA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp AGGCCAAGCCACTCCGCTCAAAGAAGGGACTGGAGCCAATCTCTTCTTTGCAATTGTCAGAGCCATACTTaGATCTCCCTTGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: RPSHSAQRRDWSQSLLCNCQSHT*ISLAVS
Trigger: AGACACAGCAAGGGAGATCAAAGTATGGCTCTGACA...ATTGCAAAGAAGAGATTGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCTTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS TCA 90 bp AGGATCTCCGAAGTCTCATCAAGGTTAGTCTCCTTTCTGGAATGCTaGTCCAGGGGAAGAGGAGCTGGGTTGGAATATTCATCACTGTCC +
Preference number: 5 (lower is better)
Translates to: RISEVSSRLVSFLEC*SRGRGAGLEYSSLS
Trigger: GGACAGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTGGATCAGCATTCCAGAAAGGAGACTAACCTTGATGAGACTTCGGAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000529915.1
ENST00000530561.5
CDS TCA 90 bp GAGCGTTCCAGTTCCTCCAATAAGGCATCTCTAGGAGCTCACAGGTaGGTGACTCACACACCGGAAGACGAGATCAATAATGTAGACATG +
Preference number: 5 (lower is better)
Translates to: ERSSSSNKASLGAHR*VTHTPEDEINNVDM
Trigger: CATGTCTACATTATTGATCTCGTCTTCCGGTGTGTGAGTCACTCACCTGTGAGCTCCTAGAGATGCCTTATTGGAGGAACTGGAACGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528489.1
CDS GCA 90 bp TCCTCCAATAAGGCATCTAACTCTTCCATTGTCCTACATCCAAGATaGTCTTGTCTCACAGGCCGTGAGGAACAGCTTTGGCATGTGCTG +
Preference number: 5 (lower is better)
Translates to: SSNKASNSSIVLHPR*SCLTGREEQLWHVL
Trigger: CAGCACATGCCAAAGCTGTTCCTCACGGCCTGTGAGACAAGAGCATCTTGGATGTAGGACAATGGAAGAGTTAGATGCCTTATTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000529915.1
ENST00000530561.5
CDS-3UTR CAA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAACCAGACCCCCAAGCATaGAGTCCAGGGAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: DQIREDMSRAITRGENGEPDPQA*SPGRPC
Trigger: ACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTGG...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGCTCTCACTGCAACCTaGGCCTGCATCTCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: DQIREDMSRAITRGENGEALTAT*ACISVR
Trigger: CCTGACTGAGATGCAGGCCAAGGTTGCAGTGAGAGC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CAA 90 bp TCTCAATATGGGCTTGGGACTTCTCATCCTTCCTACTGTCAGAGCCATACTTTGTCTGGTAAGTGCTTCTaGCCAGCATCTGCTCTCACT +
Preference number: 5 (lower is better)
Translates to: SQYGLGTSHPSYCQSHTLSGKCF*PASALT
Trigger: AGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAGA...CAAAGTATGGCTCTGACAGTAGGAAGGATGAGAAGTCCCAAGCCCATATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGCCAGGTCTGGTTCATaGCTGTCAGCACTTTATCCA +
Preference number: 5 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGARSGS*LSALYP
Trigger: TGGATAAAGTGCTGACAGCAATGAACCAGACCTGGC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCTGCTCAGGATGGAACTaGTACCCCATGGCACTGATA +
Preference number: 5 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGCSGWN*YPMALI
Trigger: TATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCA...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTGCTCAGGATGGAACTaGTACCCCATGGCACTGATA +
Preference number: 5 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMCSGWN*YPMALI
Trigger: TATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp ACAATAGGTCTTGTCATTCTGCTCCCTGAAAATGCCCTTCGACAACTGTGTCAGTGCTCAGGATGGAACTaGTACCCCATGGCACTGATA +
Preference number: 5 (lower is better)
Translates to: TIGLVILLPENALRQLCQCSGWN*YPMALI
Trigger: TATCAGTGCCATGGGGTACAAGTTCCATCCTGAGCA...CTGACACAGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACAAGACCTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp GTAGGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VGPSLEVKMEKPKKTSVGEAMDQ*ALQWEE
Trigger: CTCTTCCCACTGTAATGCCAACTGATCCATAGCCTC...GCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGACCATCAGACCAGCAATaGGCTCGACGCTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGPSDQQ*ARRLSP
Trigger: CGGGCTCAAGCGTCGAGCCAATTGCTGGTCTGATGG...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528489.1
CDS-3UTR CAA 90 bp GACCAAATTAGAGAAGATATGAGTAGGGCCATCACTAGAGGTGAAAATGGAGAAGTGGTGGTGATTCCTTaGGCTCTTGGGCTTCACGGC +
Preference number: 5 (lower is better)
Translates to: DQIREDMSRAITRGENGEVVVIP*ALGLHG
Trigger: GCCGTGAAGCCCAAGAGCCAAAGGAATCACCACCAC...TTCTCCATTTTCACCTCTAGTGATGGCCCTACTCATATCTTCTCTAATTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528489.1
CDS TCA 90 bp TTGGTAGTATACACGAGCTGCGCCGGCAAGGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAAGTCTCATCAAGGTTAGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LVVYTSCAGKGLVLS*IERISEVSSRLVSF
Trigger: AAAGGAGACTAACCTTGATGAGACTTCGGAGATCCTTTCTATTCAGGATAACACAAGTCCCTTGCCGGCGCAGCTCGTGTATACTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000529915.1
ENST00000530561.5
CDS-3UTR CAA 90 bp GGGCCATCACTAGAGGTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGTTGAGCTCCTGGATATaGGTAGTATACACGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPSLEVKMEKPKKTSVGMLSSWI*VVYTSC
Trigger: GCAGCTCGTGTATACTACCAATATCCAGGAGCTCAA...CATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCACCTCTAGTGATGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAGCTCTCACTGCAACCTaGGCCTGCATCTCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGALTAT*ACISVR
Trigger: CCTGACTGAGATGCAGGCCAAGGTTGCAGTGAGAGC...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
CDS-3UTR CAA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACCCAGACCCCCAAGCATaGAGTCCAGGGAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYPDPQA*SPGRPC
Trigger: ACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTGG...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGATCCAACACTGGGCGATaGCAGCCACCACACTTGGGT +
Preference number: 5 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGSNTGR*QPPHLG
Trigger: ACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGGA...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS TCA 90 bp ATTCCTTTGGCTCTTGGGCTTCACGGCAAGGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAAGTCTCATCAAGGTTAGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: IPLALGLHGKGLVLS*IERISEVSSRLVSF
Trigger: AAAGGAGACTAACCTTGATGAGACTTCGGAGATCCTTTCTATTCAGGATAACACAAGTCCCTTGCCGTGAAGCCCAAGAGCCAAAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528489.1
CDS-3UTR CAA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTCCAGACCCCCAAGCATaGAGTCCAGGGAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: KPKKTSVGMNYASGKYICPDPQA*SPGRPC
Trigger: ACAAGGCCTCCCTGGACTCAATGCTTGGGGGTCTGG...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGATCCAACACTGGGCGATaGCAGCCACCACACTTGGGT +
Preference number: 5 (lower is better)
Translates to: PKKTSVGMNYASGKYICRSNTGR*QPPHLG
Trigger: ACCCAAGTGTGGTGGCTGCAATCGCCCAGTGTTGGA...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp TCTGAAGAGGCTATGGATCAGTTGGCATTACAGTGGGAAGAGCTTATTGAAGCATCTAACTCCAAGTGCTaGATTGGAGAAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SEEAMDQLALQWEELIEASNSKC*IGEERE
Trigger: CTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAGA...TGCTTCAATAAGCTCTTCCCACTGTAATGCCAACTGATCCATAGCCTCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp ACAATAGGTCTTGTCATTCTGCTCCCTGAAAATGCCCTTCGACAACTGTGTCAGTATCTCAATATGGGCTaGGGACTTCTCATCCTTCCT +
Preference number: 5 (lower is better)
Translates to: TIGLVILLPENALRQLCQYLNMG*GLLILP
Trigger: AGGAAGGATGAGAAGTCCCAAGCCCATATTGAGATA...CTGACACAGTTGTCGAAGGGCATTTTCAGGGAGCAGAATGACAAGACCTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACAAACTCCGTCTCTACTaGGCCTGCATCTCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYKLRLY*ACISVR
Trigger: CCTGACTGAGATGCAGGCCAAGTAGAGACGGAGTTT...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530561.5
CDS-3UTR CAA 90 bp ATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACGGAAGAGGAGCTGGGTaGGAATATTCATCACTGTCC +
Preference number: 5 (lower is better)
Translates to: MEKPKKTSVGMNYASGKYGRGAG*EYSSLS
Trigger: GGACAGTGATGAATATTCCAACCCAGCTCCTCTTCC...GTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAGGAAGAGGAGCTGGGTaGGAATATTCATCACTGTCC +
Preference number: 5 (lower is better)
Translates to: PKKTSVGMNYASGKYICRGRGAG*EYSSLS
Trigger: GGACAGTGATGAATATTCCAACCCAGCTCCTCTTCC...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAGCCAGGTCTGGTTCATaGCTGTCAGCACTTTATCCA +
Preference number: 5 (lower is better)
Translates to: PKKTSVGMNYASGKYICRARSGS*LSALYP
Trigger: TGGATAAAGTGCTGACAGCAATGAACCAGACCTGGC...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGAGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PKKTSVGMNYASGKYICREAMDQ*ALQWEE
Trigger: CTCTTCCCACTGTAATGCCAACTGATCCATAGCCTC...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCGAGGCTATGGATCAGTaGGCATTACAGTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: EKPKKTSVGMNYASGKYIEAMDQ*ALQWEE
Trigger: CTCTTCCCACTGTAATGCCAACTGATCCATAGCCTC...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GTGAAAATGGAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGATCTAACTCCAAGTGCTaGATTGGAGAAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VKMEKPKKTSVGMNYASGSNSKC*IGEERE
Trigger: CTCCCTCTCTTCTCCAATCAAGCACTTGGAGTTAGA...TCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTCCATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGGAAGAGGAGCTGGGTaGGAATATTCATCACTGTCC +
Preference number: 5 (lower is better)
Translates to: KPKKTSVGMNYASGKYICGRGAG*EYSSLS
Trigger: GGACAGTGATGAATATTCCAACCCAGCTCCTCTTCC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp GAGAAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTTGAGCTCCTGGATATaGGTAGTATACACGAGCTGC +
Preference number: 5 (lower is better)
Translates to: EKPKKTSVGMNYASGKYILSSWI*VVYTSC
Trigger: GCAGCTCGTGTATACTACCAATATCCAGGAGCTCAA...GATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp CCACAAGCCAGTTTATTTATCAATGATGTCAGTACTCAAAGTTGTCCAGTTAAATCTGGTAAGTGCTTCTaGCCAGCATCTGCTCTCACT +
Preference number: 5 (lower is better)
Translates to: PQASLFINDVSTQSCPVKSGKCF*PASALT
Trigger: AGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAGA...TTTAACTGGACAACTTTGAGTACTGACATCATTGATAAATAAACTGGCTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTTCTGGTAAGTGCTTCTaGCCAGCATCTGCTCTCACT +
Preference number: 5 (lower is better)
Translates to: KPKKTSVGMNYASGKYICSGKCF*PASALT
Trigger: AGTGAGAGCAGATGCTGGCAAGAAGCACTTACCAGA...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTGCCAGGTCTGGTTCATaGCTGTCAGCACTTTATCCA +
Preference number: 5 (lower is better)
Translates to: KPKKTSVGMNYASGKYICARSGS*LSALYP
Trigger: TGGATAAAGTGCTGACAGCAATGAACCAGACCTGGC...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000530561.5
CDS-3UTR CAA 90 bp CCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTAGACATCTAACTCTTCCATaGTCCTACATCCAAGATGCT +
Preference number: 5 (lower is better)
Translates to: PKKTSVGMNYASGKYICRHLTLP*SYIQDA
Trigger: AGCATCTTGGATGTAGGACAATGGAAGAGTTAGATG...TCTACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395074.7
ENST00000530561.5
CDS-3UTR CAA 90 bp AAACCTAAGAAAACCAGTGTTGGCATGAATTATGCAAGTGGAAAATACATCTGTCATCTAACTCTTCCATaGTCCTACATCCAAGATGCT +
Preference number: 5 (lower is better)
Translates to: KPKKTSVGMNYASGKYICHLTLP*SYIQDA
Trigger: AGCATCTTGGATGTAGGACAATGGAAGAGTTAGATG...ACAGATGTATTTTCCACTTGCATAATTCATGCCAACACTGGTTTTCTTAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395074.7
ENST00000530561.5
CDS CCA 72 bp CAGAGGAGGTGTCATCTGACCAAACCAAGGCAAGTCTaGGCAGTTACGCAGACACCCCGAGAAAGGTACGCC +
Preference number: 6 (lower is better)
Translates to: QRRCHLTKPRQV*AVTQTPRERYA
Trigger: GGCGTACCTTTCTCGGGGTGTCTGCGTAACTGCCCAGACTTGCCTTGGTTTGGTCAGATGACACCTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528489.1
ENST00000528954.5
CDS TCA 72 bp GTCTCACAGGCCGTGAGGAACAGCTTTGGCATGTGCTaGAGAAGAGGACCGCAAAGGAACTGGATGAGACAG +
Preference number: 6 (lower is better)
Translates to: VSQAVRNSFGMC*RRGPQRNWMRQ
Trigger: CTGTCTCATCCAGTTCCTTTGCGGTCCTCTTCTTCAGCACATGCCAAAGCTGTTCCTCACGGCCTGTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529915.1
CDS TCA 72 bp GGAAGAGGAGCTGGGTTGGAATATTCATCACTGTCCTaGAGGGTGGAGCGTTCCAGTTCCTCCAATAAGGCA +
Preference number: 6 (lower is better)
Translates to: GRGAGLEYSSLS*RVERSSSSNKA
Trigger: TGCCTTATTGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTCCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000529915.1
ENST00000530561.5
CDS CCA 72 bp CTCCTTTCTGGAATGCTGATCCAGGGGAAGAGGAGCTaGGTTGGAATATTCATCACTGTCCTGAAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: LLSGMLIQGKRS*VGIFITVLKGG
Trigger: TCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTCCTCTTCCCCTGGATCAGCATTCCAGAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395074.7
ENST00000528489.1
ENST00000528954.5
ENST00000529915.1
ENST00000530561.5
CDS CCA 72 bp GAGCTGGGTTGGAATATTCATCACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCAATAAGGCATCGGAAG +
Preference number: 6 (lower is better)
Translates to: ELGWNIHHCPEG*SVPVPPIRHRK
Trigger: CTTCCGATGCCTTATTGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528954.5
CDS TCA 72 bp TACACGAGCTGCGCCGGCAAGGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAAGTCTCATCAAGGTTA +
Preference number: 6 (lower is better)
Translates to: YTSCAGKGLVLS*IERISEVSSRL
Trigger: TAACCTTGATGAGACTTCGGAGATCCTTTCTATTCAGGATAACACAAGTCCCTTGCCGGCGCAGCTCGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395074.7
ENST00000528954.5
ENST00000529915.1
ENST00000530561.5
CDS GCA 72 bp AAGGCATCTAACTCTTCCATTGTCCTACATCCAAGATaGTCTTGTCTCACAGGCCGTGAGGAACAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: KASNSSIVLHPR*SCLTGREEQLW
Trigger: CCAAAGCTGTTCCTCACGGCCTGTGAGACAAGAGCATCTTGGATGTAGGACAATGGAAGAGTTAGATGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000529915.1
ENST00000530561.5
CDS CCA 72 bp GAGCTGGGTTGGAATATTCATCACTGTCCTGAAGGGTaGAGCGTTCCAGTTCCTCCAATAAGGCATCTAACT +
Preference number: 6 (lower is better)
Translates to: ELGWNIHHCPEG*SVPVPPIRHLT
Trigger: AGTTAGATGCCTTATTGGAGGAACTGGAACGCTCCACCCTTCAGGACAGTGATGAATATTCCAACCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395074.7
ENST00000529915.1
ENST00000530561.5
CDS TCA 72 bp AGTTCCTCCAATAAGGCATCTCTAGGAGCTCACAGGTaGGTGACTCACACACCGGAAGACGAGATCAATAAT +
Preference number: 6 (lower is better)
Translates to: SSSNKASLGAHR*VTHTPEDEINN
Trigger: ATTATTGATCTCGTCTTCCGGTGTGTGAGTCACTCACCTGTGAGCTCCTAGAGATGCCTTATTGGAGGAACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528489.1
CDS TCA 72 bp GCTCTTGGGCTTCACGGCAAGGGACTTGTGTTATCCTaGATAGAAAGGATCTCCGAAGTCTCATCAAGGTTA +
Preference number: 6 (lower is better)
Translates to: ALGLHGKGLVLS*IERISEVSSRL
Trigger: TAACCTTGATGAGACTTCGGAGATCCTTTCTATTCAGGATAACACAAGTCCCTTGCCGTGAAGCCCAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528489.1