RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101577

Ensembl transcript IDs: ENST00000261596.8, ENST00000581568.1, ENST00000584915.1, ENST00000677752.1

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGGTTTATGGGACTGGGCTCAGTGGCTCTGGTGCATGGGCCCTaGAGGGGCGGGGGTCCTGCCCAACTTGGCCCACTGGAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: ARFMGLGSVALVHGP*RGGGPAQLGPLEQL
Trigger: CAGCTGCTCCAGTGGGCCAAGTTGGGCAGGACCCCCGCCCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp AAAGAGGGCCAGGTTTATGGGACTGGGCTCAGTGGCTCTGGTGCATaGGCCCTGCAGGGGCGGGGGTCCTGCCCAACTTGGCCCACTGGA +
Preference number: 1 (lower is better)
Translates to: KEGQVYGTGLSGSGA*ALQGRGSCPTWPTG
Trigger: TCCAGTGGGCCAAGTTGGGCAGGACCCCCGCCCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGGCCCTCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 90 bp TCCTCCCTTCTCCTTCCAGGAGCTGAGCTGCAGACCTGCCGAGCCTaGGCAGCTGGCCTGGGAAGGCAAAGGAGGATGGCGGGACCAGCT +
Preference number: 1 (lower is better)
Translates to: SSLLLPGAELQTCRA*AAGLGRQRRMAGPA
Trigger: AGCTGGTCCCGCCATCCTCCTTTGCCTTCCCAGGCCAGCTGCTCAGGCTCGGCAGGTCTGCAGCTCAGCTCCTGGAAGGAGAAGGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp ATGGCGGGACCAGCTCCAGAAGCACCCGTCCCCGCTGGGGAAGGCTaGTATCTGAGGTCAGCAGAAGAGCCAGCTGCCTTCCCTTGCTGT +
Preference number: 1 (lower is better)
Translates to: MAGPAPEAPVPAGEG*YLRSAEEPAAFPCC
Trigger: ACAGCAAGGGAAGGCAGCTGGCTCTTCTGCTGACCTCAGATACCAGCCTTCCCCAGCGGGGACGGGTGCTTCTGGAGCTGGTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 90 bp CTTCAGCCAGCATCACTGACTGGGCCCGCAGCAGTTCAGGGACCCTaGCATCTGAAGACAGCCCTGGTTACAGAAGCCACCTCAACTGCC +
Preference number: 1 (lower is better)
Translates to: LQPASLTGPAAVQGP*HLKTALVTEATSTA
Trigger: GGCAGTTGAGGTGGCTTCTGTAACCAGGGCTGTCTTCAGATGTCAGGGTCCCTGAACTGCTGCGGGCCCAGTCAGTGATGCTGGCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 90 bp ACGAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTaGTCAGGAACCACCACGTCCTGTGTTCTCGCCAATGGAGACCAA +
Preference number: 1 (lower is better)
Translates to: TRPPRAPSLYLQIPL*SGTTTSCVLANGDQ
Trigger: TTGGTCTCCATTGGCGAGAACACAGGACGTGGTGGTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 90 bp ATGAAGAGTTGGCCACGAGACCACCCCGAGCGCCAAGCCTGTATCTaGAGATCCCTCTCTGCTCAGGAACCACCACGTCCTGTGTTCTCG +
Preference number: 1 (lower is better)
Translates to: MKSWPRDHPERQACI*RSLSAQEPPRPVFS
Trigger: CGAGAACACAGGACGTGGTGGTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTCGTGGCCAACTCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp GATCCCTCTCTGCTCAGGAACCACCACGTCCTGTGTTCTCGCCAATaGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTC +
Preference number: 1 (lower is better)
Translates to: DPSLLRNHHVLCSRQ*RPRPGVGSGLLTVL
Trigger: GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAGGACGTGGTGGTTCCTGAGCAGAGAGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 90 bp CGGGCCCGATTACAGGGTGTGATCCCAAAAGCCAAAGTCACACACTaGTGGCCAGTGCCTTTAAGCAAGCTTCACTGTGCTTCCCTGACA +
Preference number: 1 (lower is better)
Translates to: RARLQGVIPKAKVTH*WPVPLSKLHCASLT
Trigger: TGTCAGGGAAGCACAGTGAAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCACACCCTGTAATCGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp CCACCACGTCCTGTGTTCTCGCCAATGGAGACCAAGACCTGGGGTTaGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCT +
Preference number: 1 (lower is better)
Translates to: PPRPVFSPMETKTWG*FWAPDSSLDVKSAA
Trigger: AGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAGGACGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp CGTCCTGTGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTaGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCA +
Preference number: 1 (lower is better)
Translates to: RPVFSPMETKTWGWF*APDSSLDVKSAALS
Trigger: TGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp CAGGAACCACCACGTCCTGTGTTCTCGCCAATGGAGACCAAGACCTaGGGTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGT +
Preference number: 1 (lower is better)
Translates to: QEPPRPVFSPMETKT*GWFWAPDSSLDVKS
Trigger: ACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAGGACGTGGTGGTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp CATCTGAAGACAGCCCTGGTTACAGAAGCCACCTCAACTGCCCAGTaGAAACTGGAACACTTCACTGTGTGCAGTGTTTTGGTCCACTCT +
Preference number: 1 (lower is better)
Translates to: HLKTALVTEATSTAQ*KLEHFTVCSVLVHS
Trigger: AGAGTGGACCAAAACACTGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGTGGCTTCTGTAACCAGGGCTGTCTTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp GCCCGATTACAGGGTGTGATCCCAAAAGCCAAAGTCACACACTGCTaGCCAGTGCCTTTAAGCAAGCTTCACTGTGCTTCCCTGACAAAT +
Preference number: 1 (lower is better)
Translates to: ARLQGVIPKAKVTHC*PVPLSKLHCASLTN
Trigger: ATTTGTCAGGGAAGCACAGTGAAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCACACCCTGTAATCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 90 bp GCTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTaGGCTCATTACAACCGCATCAGTAAATGGAGCTACCATGTATAT +
Preference number: 1 (lower is better)
Translates to: AYGTPFPGAISSDTM*AHYNRISKWSYHVY
Trigger: ATATACATGGTAGCTCCATTTACTGATGCGGTTGTAATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 90 bp CTTCAGCACACAGACAGCAAAGCAAATACGAGACTTAGACTGAACTaGAAAGAGGGAAAGGGCCATTTCACCAATGGAGTAACTGAGAGA +
Preference number: 1 (lower is better)
Translates to: LQHTDSKANTRLRLN*KEGKGHFTNGVTER
Trigger: TCTCTCAGTTACTCCATTGGTGAAATGGCCCTTTCCCTCTTTGCAGTTCAGTCTAAGTCTCGTATTTGCTTTGCTGTCTGTGTGCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp AGGGGATTTCAACATTGTCTCTGCATCCGACAAGCACTAGGAAAATaGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAA +
Preference number: 1 (lower is better)
Translates to: RGFQHCLCIRQALGK*LKSVRDFQLSNLEK
Trigger: TTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCATTTTCCTAGTGCTTGTCGGATGCAGAGACAATGTTGAAATCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 90 bp AGAGGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTaGTGTACTAGAATTCACAAACTGGGAAGAACTTCATATAAACAG +
Preference number: 1 (lower is better)
Translates to: RGHTDGIYEIRWLHG*CTRIHKLGRTSYKQ
Trigger: CTGTTTATATGAAGTTCTTCCCAGTTTGTGAATTCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp TTTAAACAAGGAAAAAGACTCACATTAATTAGCCTATGTACCCACTaGATCAATCTGCAGCAACAAAGTCTAGTGCTAGCAGACACAGGG +
Preference number: 1 (lower is better)
Translates to: FKQGKRLTLISLCTH*INLQQQSLVLADTG
Trigger: CCCTGTGTCTGCTAGCACTAGACTTTGTTGCTGCAGATTGATCCAGTGGGTACATAGGCTAATTAATGTGAGTCTTTTTCCTTGTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 90 bp ATAAATAAACTCATTAAACAATTAGTCCTTATCAACTATTTAAGCTaGGGGAAGCTTTGCATGGGAGAAGGCTCATGTGGTCCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: INKLIKQLVLINYLS*GKLCMGEGSCGPFS
Trigger: AGAGAAGGGACCACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCTTAAATAGTTGATAAGGACTAATTGTTTAATGAGTTTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACCTGGTGCATGGGCCCTaGAGGGGCGGGGGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNLVHGP*RGGGPA
Trigger: GGCAGGACCCCCGCCCCTGCAGGGCCCATGCACCAG...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTCTGGTGCATGGGCCCTaGAGGGGCGGGGGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCLVHGP*RGGGPA
Trigger: GGCAGGACCCCCGCCCCTGCAGGGCCCATGCACCAG...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCCGAGCCTGAGCAGCTaGCCTGGGAAGGCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIPSLSS*PGKAKE
Trigger: CTCCTTTGCCTTCCCAGGCCAGCTGCTCAGGCTCGG...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CAA 90 bp GGAAGGCTGGTATCTGAGGTCAGCAGAAGAGCCAGCTGCCTTCCCTaGCTGTGGGGAGGGGGACCAAGCCCTGCCCACCCACTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: GRLVSEVSRRASCLP*LWGGGPSPAHPLRC
Trigger: GCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCTCCCCACAGCAAGGGAAGGCAGCTGGCTCTTCTGCTGACCTCAGATACCAGCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACCAGACCTGCCGAGCCTaGGCAGCTGGCCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNQTCRA*AAGLGR
Trigger: CCTTCCCAGGCCAGCTGCTCAGGCTCGGCAGGTCTG...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACCAGGGGCGGGGGTCCTaGCCAACTTGGCCCACTGGA +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNQGRGS*PTWPTG
Trigger: TCCAGTGGGCCAAGTTGGGCAGGACCCCCGCCCCTG...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTCAGACCTGCCGAGCCTaGGCAGCTGGCCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIQTCRA*AAGLGR
Trigger: CCTTCCCAGGCCAGCTGCTCAGGCTCGGCAGGTCTG...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGGCCAGCATCACTGACTaGGCCCGCAGCAGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: RGCSGPALPSHPISFVPRASITD*ARSSSG
Trigger: CCCTGAACTGCTGCGGGCCCAGTCAGTGATGCTGGC...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGTGGCTCTGGTGCATaGGCCCTGCAGGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSSGSGA*ALQGRG
Trigger: CCCCCGCCCCTGCAGGGCCCATGCACCAGAGCCACT...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTGGGCTCAGTGGCTCTaGTGCATGGGCCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNWAQWL*CMGPAG
Trigger: CCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTCTCCTTCCAGGAGCTaGGCTGCAGACCTGCCGAGC +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNSPSRS*AADLPS
Trigger: GCTCGGCAGGTCTGCAGCTCAGCTCCTGGAAGGAGA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAGGGGGACCAAGCCCTaGCCACCCACTGAGGTGCCG +
Preference number: 2 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLRGTKP*PPTEVP
Trigger: CGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCCAGGGGCGGGGGTCCTaGCCAACTTGGCCCACTGGA +
Preference number: 2 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLQGRGS*PTWPTG
Trigger: TCCAGTGGGCCAAGTTGGGCAGGACCCCCGCCCCTG...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGGCTCAGTGGCTCTGGTaGATGGGCCCTGCAGGGGCG +
Preference number: 2 (lower is better)
Translates to: QPPICISEASLKAELLGAAQWLW*MGPAGA
Trigger: CGCCCCTGCAGGGCCCATGCACCAGAGCCACTGAGC...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCCGAGCCTGAGCAGCTaGCCTGGGAAGGCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPPSLSS*PGKAKE
Trigger: CTCCTTTGCCTTCCCAGGCCAGCTGCTCAGGCTCGG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCGGGTCCTGCCCAACTTaGCCCACTGGAGCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPGSCPT*PTGAAD
Trigger: GTCAGCTGCTCCAGTGGGCCAAGTTGGGCAGGACCC...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTGGGACTGGGCTCAGTaGCTCTGGTGCATGGGCCCT +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNWDWAQ*LWCMGP
Trigger: AGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTTCCAAGACCCCTCTTTaGCGCTGCTTCCACGGGCCC +
Preference number: 2 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCSKTPL*RCFHGP
Trigger: GGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGA...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTAGGGGGACCAAGCCCTaGCCACCCACTGAGGTGCCG +
Preference number: 2 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVRGTKP*PPTEVP
Trigger: CGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCT...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTGCCAGCATCACTGACTaGGCCCGCAGCAGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCASITD*ARSSSG
Trigger: CCCTGAACTGCTGCGGGCCCAGTCAGTGATGCTGGC...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGCCAGGTTTATGGGACTaGGCTCAGTGGCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: RGCSGPALPSHPISFVPRPGLWD*AQWLWC
Trigger: GCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGG...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGTCTCCTTCCAGGAGCTaGGCTGCAGACCTGCCGAGC +
Preference number: 2 (lower is better)
Translates to: QPPICISEASLKAELLGASPSRS*AADLPS
Trigger: GCTCGGCAGGTCTGCAGCTCAGCTCCTGGAAGGAGA...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGCCCACTGGAGCAGCTaGCCCCTTCAGTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSAHWSS*PLQCSR
Trigger: CCTGCTACACTGAAGGGGTCAGCTGCTCCAGTGGGC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCAGAAGCCACCTCAACTaGCCAGTGGAAACTGGAACA +
Preference number: 2 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIRSHLN*PVETGT
Trigger: TGTTCCAGTTTCCACTGGGCAGTTGAGGTGGCTTCT...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAAGCTGGGGGAAGCTTTaGATGGGAGAAGGCTCATGT +
Preference number: 2 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRSWGKL*MGEGSC
Trigger: ACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCT...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTGGGACTGGGCTCAGTaGCTCTGGTGCATGGGCCCT +
Preference number: 2 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIWDWAQ*LWCMGP
Trigger: AGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTGCCCACTGGAGCAGCTaGCCCCTTCAGTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVAHWSS*PLQCSR
Trigger: CCTGCTACACTGAAGGGGTCAGCTGCTCCAGTGGGC...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGTTCCAGGAGCTGAGCTaGAGACCTGCCGAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: QPPICISEASLKAELLGAFQELS*RPAEPE
Trigger: CTCAGGCTCGGCAGGTCTGCAGCTCAGCTCCTGGAA...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAAGCAGGAAACATGTGTaGGACCCACAAAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRSRKHV*DPQRRD
Trigger: ATCCCTCCTTTGTGGGTCGCACACATGTTTCCTGCT...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGGCAGTTCAGGGACCCTaGCATCTGAAGACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: QPPICISEASLKAELLGAAVQGP*HLKTAL
Trigger: CAGGGCTGTCTTCAGATGTCAGGGTCCCTGAACTGC...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCAGATGAGAGGAGGATaGTCTGTGGGGATCTTTCCC +
Preference number: 2 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPQMRGG*SVGIFP
Trigger: GGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGCACACCTTTCCCTGGTaGCATCTCTTCAGACACGAT +
Preference number: 2 (lower is better)
Translates to: RGCSGPALPSHPISFVPRHTFPW*HLFRHD
Trigger: ATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTG...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCCCCGCTGGGGAAGGCTaGTATCTGAGGTCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIPAGEG*YLRSAE
Trigger: TTCTGCTGACCTCAGATACCAGCCTTCCCCAGCGGG...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAAGCACCCGTCCCCGCTaGGGAAGGCTGGTATCTGAG +
Preference number: 2 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLSTRPR*GRLVSE
Trigger: CTCAGATACCAGCCTTCCCCAGCGGGGACGGGTGCT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAAGTGGCTCTGGTGCATaGGCCCTGCAGGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQSGSGA*ALQGRG
Trigger: CCCCCGCCCCTGCAGGGCCCATGCACCAGAGCCACT...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGGCAGTTCAGGGACCCTaGCATCTGAAGACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQAVQGP*HLKTAL
Trigger: CAGGGCTGTCTTCAGATGTCAGGGTCCCTGAACTGC...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCCCGATTACAGGGTGTaGTCCCAAAAGCCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPPDYRV*SQKPKS
Trigger: TGACTTTGGCTTTTGGGATCACACCCTGTAATCGGG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTACTCAACCGCCTATCTaGATTTCGGAGGCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCTQPPI*ISEASL
Trigger: TAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGT...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTCTGCAGATCCCTCTCTaGTCAGGAACCACCACGTCC +
Preference number: 2 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTLQIPL*SGTTTS
Trigger: GGACGTGGTGGTTCCTGAGCAGAGAGGGATCTGCAG...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACCTGCCCAGTGGAAACTaGAACACTTCACTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNLPSGN*NTSLCA
Trigger: TGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAG...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGCCAGGTTTATGGGACTaGGCTCAGTGGCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQPGLWD*AQWLWC
Trigger: GCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGG...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACAAGCACTAGGAAAATaGCTGAAATCAGTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRQALGK*LKSVRD
Trigger: GTCCCTGACTGATTTCAGCCATTTTCCTAGTGCTTG...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTCAGTGTAGCAGGAAATaGGGCGACCAGAGAAGAAAC +
Preference number: 2 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIQCSRK*GDQRRN
Trigger: GTTTCTTCTCTGGTCGCCTCATTTCCTGCTACACTG...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTCTTCAGACACGATGTaGGCTCATTACAACCGCATC +
Preference number: 2 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNSSDTM*AHYNRI
Trigger: GATGCGGTTGTAATGAGCTCACATCGTGTCTGAAGA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTGCTCAGTGGCTCTGGTaGATGGGCCCTGCAGGGGCG +
Preference number: 2 (lower is better)
Translates to: LQLTILRVCVQTHSRASLAQWLW*MGPAGA
Trigger: CGCCCCTGCAGGGCCCATGCACCAGAGCCACTGAGC...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTAGCACCCGTCCCCGCTaGGGAAGGCTGGTATCTGAG +
Preference number: 2 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLSTRPR*GRLVSE
Trigger: CTCAGATACCAGCCTTCCCCAGCGGGGACGGGTGCT...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTGGGTCCTGCCCAACTTaGCCCACTGGAGCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLGSCPT*PTGAAD
Trigger: GTCAGCTGCTCCAGTGGGCCAAGTTGGGCAGGACCC...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGATGGGCTCAGTGGCTCTaGTGCATGGGCCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRWAQWL*CMGPAG
Trigger: CCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCA...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAGCACCCGTGTCCCCATaGGGTCTCACAGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRAPVSP*GLTGLG
Trigger: GCCTAGCCCTGTGAGACCCCATGGGGACACGGGTGC...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCACCTGGGGTTGGTTCTaGGCTCCTGACAGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: EPSPVTEDSARVMLQLTITWGWF*APDSSL
Trigger: AAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGT...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGAGCCTATGTACCCACTaGATCAATCTGCAGCAACAA +
Preference number: 2 (lower is better)
Translates to: RGCSGPALPSHPISFVPRSLCTH*INLQQQ
Trigger: TTGTTGCTGCAGATTGATCCAGTGGGTACATAGGCT...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CAA 90 bp GCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTaGTCCCTCGGTTGTTCTGTGACTTTGAGCAGCTTTCATTTTAGG +
Preference number: 2 (lower is better)
Translates to: AGAVPGQRFPVIQSP*SLGCSVTLSSFHFR
Trigger: CCTAAAATGAAAGCTGCTCAAAGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAAGGGACCCTGACATCTaGAGACAGCCCTGGTTACAG +
Preference number: 2 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLRDPDI*RQPWLQ
Trigger: CTGTAACCAGGGCTGTCTTCAGATGTCAGGGTCCCT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCCCCGATTACAGGGTGTaGTCCCAAAAGCCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIPDYRV*SQKPKS
Trigger: TGACTTTGGCTTTTGGGATCACACCCTGTAATCGGG...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTGCCAAAGTCACACACTaGTGGCCAGTGCCTTTAAGC +
Preference number: 2 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTAKVTH*WPVPLS
Trigger: GCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGC...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTTTCAACATTGTCTCTaGATCCGACAAGCACTAGGA +
Preference number: 2 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPFQHCL*IRQALG
Trigger: TCCTAGTGCTTGTCGGATGCAGAGACAATGTTGAAA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTGAAGGCAAAGGAGGATaGCGGGACCAGCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIEGKGG*RDQLQK
Trigger: CTTCTGGAGCTGGTCCCGCCATCCTCCTTTGCCTTC...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGCTGCCCAGTGGAAACTaGAACACTTCACTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQLPSGN*NTSLCA
Trigger: TGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAG...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGACCTCAACTGCCCAGTaGAAACTGGAACACTTCACT +
Preference number: 2 (lower is better)
Translates to: QPPICISEASLKAELLGATSTAQ*KLEHFT
Trigger: AGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCACCTCAACTGCCCAGTaGAAACTGGAACACTTCACT +
Preference number: 2 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLTSTAQ*KLEHFT
Trigger: AGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAAGCAGAAGAGCCAGCTaGCTTCCCTTGCTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQSRRAS*LPLLWG
Trigger: TCCCCACAGCAAGGGAAGGCAGCTGGCTCTTCTGCT...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAAGAAGCCACCTCAACTaGCCAGTGGAAACTGGAACA +
Preference number: 2 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLRSHLN*PVETGT
Trigger: TGTTCCAGTTTCCACTGGGCAGTTGAGGTGGCTTCT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTCAACTCTCCAATCTaGAAAAATAACCACCCCTAT +
Preference number: 2 (lower is better)
Translates to: RGCSGPALPSHPISFVPRFNSPI*KNNHPY
Trigger: ATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAA...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGAGCAGAAGAGCCAGCTaGCTTCCCTTGCTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: VLLVRTKKLRARGVVTDESRRAS*LPLLWG
Trigger: TCCCCACAGCAAGGGAAGGCAGCTGGCTCTTCTGCT...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTAGAGGGCCAGGTTTATaGGACTGGGCTCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: LQLTILRVCVQTHSRASLRGPGL*DWAQWL
Trigger: GAGCCACTGAGCCCAGTCCCATAAACCTGGCCCTCT...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CAA 90 bp TGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCTaGATGTTAAGAGTGCAGCTCTGTCAACACTCAGCATACCAAAAG +
Preference number: 2 (lower is better)
Translates to: WRPRPGVGSGLLTVL*MLRVQLCQHSAYQK
Trigger: CTTTTGGTATGCTGAGTGTTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCCCGCTGGGGAAGGCTaGTATCTGAGGTCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPPAGEG*YLRSAE
Trigger: TTCTGCTGACCTCAGATACCAGCCTTCCCCAGCGGG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCAACCGCATCAGTAAATaGAGCTACCATGTATATTTT +
Preference number: 2 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPNRISK*SYHVYF
Trigger: AAAATATACATGGTAGCTCCATTTACTGATGCGGTT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAATGGCACACCTTTCCCTaGTGCCATCTCTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQWHTFP*CHLFRH
Trigger: GTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCA...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTACCAAGACCTGGGGTTaGTTCTGGGCTCCTGACAGT +
Preference number: 2 (lower is better)
Translates to: LQLTILRVCVQTHSRASLTKTWG*FWAPDS
Trigger: ACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGT...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATTTCTTCCTTTAAAATaGTGCAATGGAAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLFLPLK*CNGRRP
Trigger: GGGCCTCCTTCCATTGCATCATTTTAAAGGAAGAAA...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACAGTGTAGCAGGAAATaGGGCGACCAGAGAAGAAAC +
Preference number: 2 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQQCSRK*GDQRRN
Trigger: GTTTCTTCTCTGGTCGCCTCATTTCCTGCTACACTG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTACAACGGCAGGGGCATaGAGAGTTGGCCACGAGACC +
Preference number: 2 (lower is better)
Translates to: QGLSTLQSGKITTPISLSTTAGA*RVGHET
Trigger: GGTCTCGTGGCCAACTCTTCATGCCCCTGCCGTTGT...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTAGAGGGCCAGGTTTATaGGACTGGGCTCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: QGLSTLQSGKITTPISLSRGPGL*DWAQWL
Trigger: GAGCCACTGAGCCCAGTCCCATAAACCTGGCCCTCT...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCAACCGCATCAGTAAATaGAGCTACCATGTATATTTT +
Preference number: 2 (lower is better)
Translates to: EPSPVTEDSARVMLQLTINRISK*SYHVYF
Trigger: AAAATATACATGGTAGCTCCATTTACTGATGCGGTT...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCAGCAGGAAACATGTGTaGGACCCACAAAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPSRKHV*DPQRRD
Trigger: ATCCCTCCTTTGTGGGTCGCACACATGTTTCCTGCT...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTAAGCAAGCTTCACTGTaGTTCCCTGACAAATCTGAA +
Preference number: 2 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIKQASL*FPDKSE
Trigger: TTCAGATTTGTCAGGGAAGCACAGTGAAGCTTGCTT...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAAAGCAAGCTTCACTGTaGTTCCCTGACAAATCTGAA +
Preference number: 2 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRKQASL*FPDKSE
Trigger: TTCAGATTTGTCAGGGAAGCACAGTGAAGCTTGCTT...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTTGGCACACCTTTCCCTaGTGCCATCTCTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: QGLSTLQSGKITTPISLSWHTFP*CHLFRH
Trigger: GTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCA...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGAACACTTCACTGTGTaGAGTGTTTTGGTCCACTCT +
Preference number: 2 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPEHFTV*SVLVHS
Trigger: AGAGTGGACCAAAACACTGCACACAGTGAAGTGTTC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR TCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGAGGGACCCTGACATCTaGAGACAGCCCTGGTTACAG +
Preference number: 2 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMRDPDI*RQPWLQ
Trigger: CTGTAACCAGGGCTGTCTTCAGATGTCAGGGTCCCT...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCTCTGGAGCAGCTTATaGCACACCTTTCCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMLWSSL*HTFPWC
Trigger: GCACCAGGGAAAGGTGTGCCATAAGCTGCTCCAGAG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGAGCTGGGGGAAGCTTTaGATGGGAGAAGGCTCATGT +
Preference number: 2 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMSWGKL*MGEGSC
Trigger: ACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCT...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR GCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCCGGAAGTCTGTTTTTaGCAACTTGTAAAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMPEVCF*QLVKSE
Trigger: TTCACTTTTTACAAGTTGGCAAAAACAGACTTCCGG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CAA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAGGGGCATGAAGAGTaGGCCACGAGACCACCCCGA +
Preference number: 3 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIQGHEE*ATRPPR
Trigger: TCGGGGTGGTCTCGTGGCCAACTCTTCATGCCCCTG...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp CCAGCTCCAGAAGCACCCGTCCCCGCTGGGGAAGGCTaGTATCTGAGGTCAGCAGAAGAGCCAGCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: PAPEAPVPAGEG*YLRSAEEPAAF
Trigger: GAAGGCAGCTGGCTCTTCTGCTGACCTCAGATACCAGCCTTCCCCAGCGGGGACGGGTGCTTCTGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CAA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCTCCAAGACCCCTCTTaGACGCTGCTTCCACGGGCC +
Preference number: 3 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPLQDPS*TLLPRA
Trigger: GGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp GGGATCTTTCCCCAAAGAGGGCCAGGTTTATGGGACTaGGCTCAGTGGCTCTGGTGCATGGGCCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GIFPQRGPGLWD*AQWLWCMGPAG
Trigger: CCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGGCCCTCTTTGGGGAAAGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 72 bp GCATCACTGACTGGGCCCGCAGCAGTTCAGGGACCCTaGCATCTGAAGACAGCCCTGGTTACAGAAGCCACC +
Preference number: 3 (lower is better)
Translates to: ASLTGPAAVQGP*HLKTALVTEAT
Trigger: GGTGGCTTCTGTAACCAGGGCTGTCTTCAGATGTCAGGGTCCCTGAACTGCTGCGGGCCCAGTCAGTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp CCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTaGTCAGGAACCACCACGTCCTGTGTTCTCGCCAAT +
Preference number: 3 (lower is better)
Translates to: PRAPSLYLQIPL*SGTTTSCVLAN
Trigger: ATTGGCGAGAACACAGGACGTGGTGGTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp TCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATaGGACTGGGCTCAGTGGCTCTGGTGCATGGGCCCT +
Preference number: 3 (lower is better)
Translates to: SVGIFPQRGPGL*DWAQWLWCMGP
Trigger: AGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CAA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTCTCCAAGACCCCTCTTaGACGCTGCTTCCACGGGCC +
Preference number: 3 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTLQDPS*TLLPRA
Trigger: GGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAG...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp CAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTaGATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTG +
Preference number: 3 (lower is better)
Translates to: QRSSQDPTQPPI*ISEASLKAELL
Trigger: CAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp ACACAACACAGTACCCAAAAACGGAGGCAGCCTGCATaGTCCAGGTCTACACGAGCACCTCACAGCCTGACA +
Preference number: 3 (lower is better)
Translates to: TQHSTQKRRQPA*SRSTRAPHSLT
Trigger: TGTCAGGCTGTGAGGTGCTCGTGTAGACCTGGAGCATGCAGGCTGCCTCCGTTTTTGGGTACTGTGTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp CCACGTCCTGTGTTCTCGCCAATGGAGACCAAGACCTaGGGTTGGTTCTGGGCTCCTGACAGTTCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: PRPVFSPMETKT*GWFWAPDSSLD
Trigger: ATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAGGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp CAAAACACAACACAGTACCCAAAAACGGAGGCAGCCTaGATGCTCCAGGTCTACACGAGCACCTCACAGCCT +
Preference number: 3 (lower is better)
Translates to: QNTTQYPKTEAA*MLQVYTSTSQP
Trigger: AGGCTGTGAGGTGCTCGTGTAGACCTGGAGCATGCAGGCTGCCTCCGTTTTTGGGTACTGTGTTGTGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp TCTGAAGACAGCCCTGGTTACAGAAGCCACCTCAACTaGCCAGTGGAAACTGGAACACTTCACTGTGTGCAG +
Preference number: 3 (lower is better)
Translates to: SEDSPGYRSHLN*PVETGTLHCVQ
Trigger: CTGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGTGGCTTCTGTAACCAGGGCTGTCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp CAGGGTGTGATCCCAAAAGCCAAAGTCACACACTGCTaGCCAGTGCCTTTAAGCAAGCTTCACTGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: QGVIPKAKVTHC*PVPLSKLHCAS
Trigger: GGAAGCACAGTGAAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCACACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp CCTGTGTTCTCGCCAATGGAGACCAAGACCTGGGGTTaGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAG +
Preference number: 3 (lower is better)
Translates to: PVFSPMETKTWG*FWAPDSSLDVK
Trigger: CTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp TTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTaGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCA +
Preference number: 3 (lower is better)
Translates to: FSPMETKTWGWF*APDSSLDVKSA
Trigger: TGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp TTACAGGGTGTGATCCCAAAAGCCAAAGTCACACACTaGTGGCCAGTGCCTTTAAGCAAGCTTCACTGTGCT +
Preference number: 3 (lower is better)
Translates to: LQGVIPKAKVTH*WPVPLSKLHCA
Trigger: AGCACAGTGAAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCACACCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp TGGTTACAGAAGCCACCTCAACTGCCCAGTGGAAACTaGAACACTTCACTGTGTGCAGTGTTTTGGTCCACT +
Preference number: 3 (lower is better)
Translates to: WLQKPPQLPSGN*NTSLCAVFWST
Trigger: AGTGGACCAAAACACTGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGTGGCTTCTGTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 72 bp ACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTaGGCTCATTACAACCGCATCAGTAAATGGAGCTAC +
Preference number: 3 (lower is better)
Translates to: TPFPGAISSDTM*AHYNRISKWSY
Trigger: GTAGCTCCATTTACTGATGCGGTTGTAATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 72 bp AGCACACAGACAGCAAAGCAAATACGAGACTTAGACTaGACTGCAAAGAGGGAAAGGGCCATTTCACCAATG +
Preference number: 3 (lower is better)
Translates to: STQTAKQIRDLD*TAKRERAISPM
Trigger: CATTGGTGAAATGGCCCTTTCCCTCTTTGCAGTTCAGTCTAAGTCTCGTATTTGCTTTGCTGTCTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR TCA 72 bp TTCTCTGGGAACATGAGCCTTCCTAGGTTTTGCCACTaGGAACTGTGTTTAGGGGATTTCAACATTGTCTCT +
Preference number: 3 (lower is better)
Translates to: FSGNMSLPRFCH*ELCLGDFNIVS
Trigger: AGAGACAATGTTGAAATCCCCTAAACACAGTTCTCAGTGGCAAAACCTAGGAAGGCTCATGTTCCCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR-3UTR CAA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTCTCCTGACAGTTCTCTaGATGTTAAGAGTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: QGLSTLQSGKITTPISLSLLTVL*MLRVQL
Trigger: GAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAG...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR GCA 72 bp CTGAGAACTGTGTTTAGGGGATTTCAACATTGTCTCTaGATCCGACAAGCACTAGGAAAATGGCTGAAATCA +
Preference number: 3 (lower is better)
Translates to: LRTVFRGFQHCL*IRQALGKWLKS
Trigger: TGATTTCAGCCATTTTCCTAGTGCTTGTCGGATGCAGAGACAATGTTGAAATCCCCTAAACACAGTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp CTCATTAAACAATTAGTCCTTATCAACTATTTAAGCTaGGGGAAGCTTTGCATGGGAGAAGGCTCATGTGGT +
Preference number: 3 (lower is better)
Translates to: LIKQLVLINYLS*GKLCMGEGSCG
Trigger: ACCACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCTTAAATAGTTGATAAGGACTAATTGTTTAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CCA 72 bp GGAAAAAGACTCACATTAATTAGCCTATGTACCCACTaGATCAATCTGCAGCAACAAAGTCTAGTGCTAGCA +
Preference number: 3 (lower is better)
Translates to: GKRLTLISLCTH*INLQQQSLVLA
Trigger: TGCTAGCACTAGACTTTGTTGCTGCAGATTGATCCAGTGGGTACATAGGCTAATTAATGTGAGTCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCTGGTGCATGGGCCCTaGAGGGGCGGGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVILVHGP*RGGGPA
Trigger: GGCAGGACCCCCGCCCCTGCAGGGCCCATGCACCAG...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACAGGGGCGGGGGTCCTaGCCAACTTGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRQGRGS*PTWPTG
Trigger: TCCAGTGGGCCAAGTTGGGCAGGACCCCCGCCCCTG...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCTCGGTGCCGCTATCTaGAGCTGCGCTTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVILGAAI*SCASHG
Trigger: TCCGTGGGAAGCGCAGCTGCAGATAGCGGCACCGAG...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGCACCCGTGTCCCCATaGGGTCTCACAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRAPVSP*GLTGLG
Trigger: GCCTAGCCCTGTGAGACCCCATGGGGACACGGGTGC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGATGGGACTGGGCTCAGTaGCTCTGGTGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRWDWAQ*LWCMGP
Trigger: AGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCA...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGATCCCCTGCACTGTGTaGCCGGCTCTGCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRIPCTV*PALPLL
Trigger: GAGAAGCGGCAGAGCCGGCCACACAGTGCAGGGGAT...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCGGGAAGAGCCGATGTTaGACGGCTATCACACGTGGC +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIGKSRC*TAITRG
Trigger: GCCACGTGTGATAGCCGTCCAACATCGGCTCTTCCC...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCACCGGCCGGCTCCTTaGAGCTGGATGGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPHRPAP*SWMAGH
Trigger: GTGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGTG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCCAGACCTGCCGAGCCTaGGCAGCTGGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLQTCRA*AAGLGR
Trigger: CCTTCCCAGGCCAGCTGCTCAGGCTCGGCAGGTCTG...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAACATTCTCGGCCGGCCTaGCACCGGCCGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKHSRPA*HRPAPW
Trigger: CCAAGGAGCCGGCCGGTGCCAGGCCGGCCGAGAATG...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACGAAGTTGTGCTGCCGTaGCTCAGGGGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNEVVLP*LRGSVG
Trigger: CCCCACAGAGCCCCTGAGCCACGGCAGCACAACTTC...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCATGGAGACCAAGACCTaGGGTTGGTTCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIMETKT*GWFWAP
Trigger: AGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCAT...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCGTCCATGGCAGAATCTaGGAGGCACTCGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPVHGRI*EALGAA
Trigger: AGCGGCACCGAGTGCCTCTCAGATTCTGCCATGGAC...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTTCTCCTTCCAGGAGCTaGGCTGCAGACCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCSPSRS*AADLPS
Trigger: GCTCGGCAGGTCTGCAGCTCAGCTCCTGGAAGGAGA...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTGCCCACTGGAGCAGCTaGCCCCTTCAGTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIAHWSS*PLQCSR
Trigger: CCTGCTACACTGAAGGGGTCAGCTGCTCCAGTGGGC...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGGCCCACTGGAGCAGCTaGCCCCTTCAGTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLAHWSS*PLQCSR
Trigger: CCTGCTACACTGAAGGGGTCAGCTGCTCCAGTGGGC...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCACAACGGCAGGGGCATaGAGAGTTGGCCACGAGACC +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPTTAGA*RVGHET
Trigger: GGTCTCGTGGCCAACTCTTCATGCCCCTGCCGTTGT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGTCACTGGCTGGCGGTaGCTCAGATTTTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRVTGWR*LRFSLL
Trigger: AAGGAGGGAAAATCTGAGGCACCGCCAGCCAGTGAC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGAGGGGGACCAAGCCCTaGCCACCCACTGAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQRGTKP*PPTEVP
Trigger: CGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCT...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAAGGGGGACCAAGCCCTaGCCACCCACTGAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKRGTKP*PPTEVP
Trigger: CGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCT...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTTCCAGGAGCTGAGCTaGAGACCTGCCGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPFQELS*RPAEPE
Trigger: CTCAGGCTCGGCAGGTCTGCAGCTCAGCTCCTGGAA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCAGGGGCGGGGGTCCTaGCCAACTTGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVQGRGS*PTWPTG
Trigger: TCCAGTGGGCCAAGTTGGGCAGGACCCCCGCCCCTG...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTCTCCTTGGAGCTGGATaGCAGGTCACTGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCLLGAG*QVTGWR
Trigger: CCGCCAGCCAGTGACCTGCCATCCAGCTCCAAGGAG...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTCCGGCTCCTTGGAGCTaGATGGCAGGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCPAPWS*MAGHWL
Trigger: CAGCCAGTGACCTGCCATCCAGCTCCAAGGAGCCGG...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTAGCACCCGTCCCCGCTaGGGAAGGCTGGTATCTGAG +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPISTRPR*GRLVSE
Trigger: CTCAGATACCAGCCTTCCCCAGCGGGGACGGGTGCT...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAAGTGGCTCTGGTGCATaGGCCCTGCAGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLSGSGA*ALQGRG
Trigger: CCCCCGCCCCTGCAGGGCCCATGCACCAGAGCCACT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGTGGGCTCAGTGGCTCTaGTGCATGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAWAQWL*CMGPAG
Trigger: CCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCA...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTTGGGACTGGGCTCAGTaGCTCTGGTGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIWDWAQ*LWCMGP
Trigger: AGGGCCCATGCACCAGAGCCACTGAGCCCAGTCCCA...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTCTGGAGCAGCTTATaGCACACCTTTCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRLWSSL*HTFPWC
Trigger: GCACCAGGGAAAGGTGTGCCATAAGCTGCTCCAGAG...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTGTGAGACTCTGATCTaGGCAGGCTCTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRCETLI*AGSPQV
Trigger: AACCTGCGGAGAGCCTGCTCAGATCAGAGTCTCACA...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTCCAAGACCCCTCTTTaGCGCTGCTTCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTISKTPL*RCFHGP
Trigger: GGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGCGGCCTGAGGATGACTaGCCTCCAACAACTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRRPEDD*PPTTED
Trigger: ATCCTCAGTTGTTGGAGGGCAGTCATCCTCAGGCCG...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCCTCGGTGCCGCTATCTaGAGCTGCGCTTCCCACGGA +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSLGAAI*SCASHG
Trigger: TCCGTGGGAAGCGCAGCTGCAGATAGCGGCACCGAG...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCCTGAGAGGCACTCGGTaGCGCTATCTGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTILRGTR*RYLQLR
Trigger: GCGCAGCTGCAGATAGCGGCACCGAGTGCCTCTCAG...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTGGGTCATGTCGGCCATaGCGATGGCACGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVGSCRP*RWHEPS
Trigger: GCTCGGCTCGTGCCATCGGCATGGCCGACATGACCC...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAGCTCAGTGGCTCTGGTaGATGGGCCCTGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLAQWLW*MGPAGA
Trigger: CGCCCCTGCAGGGCCCATGCACCAGAGCCACTGAGC...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGCCGCTAAGGCTGCGTTaGGAAGGTGGTCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRPLRLR*EGGQHL
Trigger: TAGATGCTGACCACCTTCCCAACGCAGCCTTAGCGG...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGTCTTTGCCCAGCTGTaGGAGAATCTGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRVFAQL*ENLSQS
Trigger: GCTTTGGGACAGATTCTCCCACAGCTGGGCAAAGAC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTTGGGCTCAGTGGCTCTaGTGCATGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTWAQWL*CMGPAG
Trigger: CCCTGCAGGGCCCATGCACCAGAGCCACTGAGCCCA...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCAGAGGGCCAGGTTTATaGGACTGGGCTCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPRGPGL*DWAQWL
Trigger: GAGCCACTGAGCCCAGTCCCATAAACCTGGCCCTCT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CAA 72 bp GTAGAGGTTCCACTACAACGGCAGGGGCATGAAGAGTaGGCCACGAGACCACCCCGAGCGCCAAGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VEVPLQRQGHEE*ATRPPRAPSLY
Trigger: ATACAGGCTTGGCGCTCGGGGTGGTCTCGTGGCCAACTCTTCATGCCCCTGCCGTTGTAGTGGAACCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCACGTCCACTCCATGTaGGACTCTGATCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPHVHSM*DSDLSR
Trigger: CCTGCTCAGATCAGAGTCTCACATGGAGTGGACGTG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTTCTTCGAGCTCCTGTaGTCCCTCGTCACTCGAGGA +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNFFELL*SLVTRG
Trigger: TCCTCGAGTGACGAGGGATCACAGGAGCTCGAAGAA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTTCTTCGAGCTCCTGTaGTCCCTCGTCACTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPFFELL*SLVTRG
Trigger: TCCTCGAGTGACGAGGGATCACAGGAGCTCGAAGAA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCGGATGGGGTCCACTGTaGTGGATTCTTCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPGWGPL*WILRAP
Trigger: AGGAGCTCGAAGAATCCATCACAGTGGACCCCATCC...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCGAGAGACTTCTTATATaGAGTTGTGCTGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIERLLI*SCAAVA
Trigger: AGCCACGGCAGCACAACTTCATATAAGAAGTCTCTC...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAGCGACAGGTGCCTTaGTACTGGGTTGTAATACTA +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIQRQVP*YWVVIL
Trigger: TAGTATTACAACCCAGTATCAAGGCACCTGTCGCTG...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACGCAGCAGATGCGGCCTaGTCTTCCTTCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNAADAA*SSFLLS
Trigger: GGACAGTAAGAAGGAAGAGCAGGCCGCATCTGCTGC...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTTCAGACTCGGGCCACTaGCTGGAACCGGGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTSDSGH*LEPGSD
Trigger: ATCGGAGCCCGGTTCCAGGCAGTGGCCCGAGTCTGA...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACAGAAGGGGGAACACATaGTCCACGAGCTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNRRGNT*STSSLS
Trigger: GCTGAGTGAGCTCGTGGAGCATGTGTTCCCCCTTCT...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCGCCCACCCACTGAGGTaGCGCCTCAAGACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIAHPLR*RLKTGH
Trigger: ATGACCTGTCTTGAGGCGGCACCTCAGTGGGTGGGC...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCTTCCAGGAGCTGAGCTaGAGACCTGCCGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSFQELS*RPAEPE
Trigger: CTCAGGCTCGGCAGGTCTGCAGCTCAGCTCCTGGAA...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACTGGTGCATGGGCCCTaGAGGGGCGGGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQLVHGP*RGGGPA
Trigger: GGCAGGACCCCCGCCCCTGCAGGGCCCATGCACCAG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCAGAGCCCAATCTGCCTaGCATCTCCCTGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSRAQSA*HLPEPS
Trigger: TGACGGCTCAGGGAGATGGCAGGCAGATTGGGCTCT...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCAAAACGGAGGCAGCCTaGATGCTCCAGGTCTACACG +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPKTEAA*MLQVYT
Trigger: CGTGTAGACCTGGAGCATGCAGGCTGCCTCCGTTTT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCGATCCTCGTGCTGCCTaGGCCCCCTTGTCATCATCG +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIDPRAA*APLSSS
Trigger: CGATGATGACAAGGGGGCCCAGGCAGCACGAGGATC...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTACTCGGGCCACTGCCTaGAACCGGGCTCCGATTCAC +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTTRATA*NRAPIH
Trigger: GTGAATCGGAGCCCGGTTCCAGGCAGTGGCCCGAGT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGTGGATGGCAGGTCACTaGCTGGCGGTGCCTCAGATT +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLWMAGH*LAVPQI
Trigger: AATCTGAGGCACCGCCAGCCAGTGACCTGCCATCCA...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTCCGGCTCCTTGGAGCTaGATGGCAGGTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTPAPWS*MAGHWL
Trigger: CAGCCAGTGACCTGCCATCCAGCTCCAAGGAGCCGG...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTCGGAGAACAAGCTGCTaGGGGACAGCATCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTRRTSC*GTASGG
Trigger: GCCCCCTGATGCTGTCCCCCAGCAGCTTGTTCTCCG...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTCCCGCTGGGGAAGGCTaGTATCTGAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIPAGEG*YLRSAE
Trigger: TTCTGCTGACCTCAGATACCAGCCTTCCCCAGCGGG...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTGCCAGCATCACTGACTaGGCCCGCAGCAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTASITD*ARSSSG
Trigger: CCCTGAACTGCTGCGGGCCCAGTCAGTGATGCTGGC...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCAGGGGCATGAAGAGTTaGCCACGAGACCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIRGMKS*PRDHPE
Trigger: CTCGGGGTGGTCTCGTGGCCAACTCTTCATGCCCCT...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTGCCCTCCAACAACTaGGGATGCTGCAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVLPSNN*GCCRRT
Trigger: GGTCCTCCTGCAGCATCCTCAGTTGTTGGAGGGCAG...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR TCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCCACGTCCACTCCATGTaGGACTCTGATCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSHVHSM*DSDLSR
Trigger: CCTGCTCAGATCAGAGTCTCACATGGAGTGGACGTG...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTTTCTCCATTTTCACTaGGGCCCCCGCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNFLHFH*GPRKGR
Trigger: TCTCCCTTTGCGGGGGCCTCAGTGAAAATGGAGAAA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTGGATGGGGTCCACTGTaGTGGATTCTTCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIGWGPL*WILRAP
Trigger: AGGAGCTCGAAGAATCCATCACAGTGGACCCCATCC...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGAGAGACTTCTTATATaGAGTTGTGCTGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRERLLI*SCAAVA
Trigger: AGCCACGGCAGCACAACTTCATATAAGAAGTCTCTC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGAGGGACCCTGACATCTaGAGACAGCCCTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLRDPDI*RQPWLQ
Trigger: CTGTAACCAGGGCTGTCTTCAGATGTCAGGGTCCCT...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCGCAGTTCAGGGACCCTaGCATCTGAAGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLAVQGP*HLKTAL
Trigger: CAGGGCTGTCTTCAGATGTCAGGGTCCCTGAACTGC...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTACAACGGCAGGGGCATaGAGAGTTGGCCACGAGACC +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTTTAGA*RVGHET
Trigger: GGTCTCGTGGCCAACTCTTCATGCCCCTGCCGTTGT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCAAGATAGCGCGAGGGTaGTGCTTCAACTCACCATCC +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPKIARG*CFNSPS
Trigger: GGATGGTGAGTTGAAGCATCACCCTCGCGCTATCTT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGTGCAGGCCCCACAGTTGCAGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCATACGAGACTTAGACTaGACTGCAAAGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CAGPTVAGAVPGQRFPVIIRDLD*TAKRER
Trigger: CCTTTCCCTCTTTGCAGTTCAGTCTAAGTCTCGTAT...GATGACTGGGAAGCGCTGGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCACAGTGACAATCACCTaGCCAGCCAGCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSTVTIT*PASCPT
Trigger: TGTGGGACAGCTGGCTGGGCAGGTGATTGTCACTGT...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGAGCAGAAGAGCCAGCTaGCTTCCCTTGCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGASRRAS*LPLLWG
Trigger: TCCCCACAGCAAGGGAAGGCAGCTGGCTCTTCTGCT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCACTCAACCGCCTATCTaGATTTCGGAGGCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPTQPPI*ISEASL
Trigger: TAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACGCCAAAGTCACACACTaGTGGCCAGTGCCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNAKVTH*WPVPLS
Trigger: GCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGC...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAGAGCCCAATCTGCCTaGCATCTCCCTGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLRAQSA*HLPEPS
Trigger: TGACGGCTCAGGGAGATGGCAGGCAGATTGGGCTCT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTTGTGGAAGGGCTGTGTaGAGGCCCCACAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVCGRAV*RPHSCR
Trigger: CCTGCAACTGTGGGGCCTGCACACAGCCCTTCCACA...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAGATCCTCGTGCTGCCTaGGCCCCCTTGTCATCATCG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKDPRAA*APLSSS
Trigger: CGATGATGACAAGGGGGCCCAGGCAGCACGAGGATC...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTGACCTTGGTGGACTCTaGGAATCCGCCCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTDLGGL*ESAPRP
Trigger: TGGACGTGGGGCGGATTCCCAGAGTCCACCAAGGTC...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGCCGCTAAGGCTGCGTTaGGAAGGTGGTCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLPLRLR*EGGQHL
Trigger: TAGATGCTGACCACCTTCCCAACGCAGCCTTAGCGG...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCGTCAGGCAAGTCCATaGCAGAATCTGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPRQASP*QNLRGT
Trigger: AGTGCCTCTCAGATTCTGCCATGGACTTGCCTGACG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTGGCAGGTCACTGGCTaGCGGTGCCTCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIWQVTG*RCLRFS
Trigger: GGAAAATCTGAGGCACCGCCAGCCAGTGACCTGCCA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACAGTTCCACAGGTAAATaGTCCCTGCACAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNSSTGK*SLHSDR
Trigger: CCTGTCGCTGTGCAGGGACCATTTACCTGTGGAACT...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGAAGGCAAAGGAGGATaGCGGGACCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSEGKGG*RDQLQK
Trigger: CTTCTGGAGCTGGTCCCGCCATCCTCCTTTGCCTTC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCGAAGGCAAAGGAGGATaGCGGGACCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIEGKGG*RDQLQK
Trigger: CTTCTGGAGCTGGTCCCGCCATCCTCCTTTGCCTTC...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGCTGCCCAGTGGAAACTaGAACACTTCACTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRLPSGN*NTSLCA
Trigger: TGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAG...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAAGTGGCTCTGGTGCATaGGCCCTGCAGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRSGSGA*ALQGRG
Trigger: CCCCCGCCCCTGCAGGGCCCATGCACCAGAGCCACT...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCACCTGGGGTTGGTTCTaGGCTCCTGACAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPTWGWF*APDSSL
Trigger: AAGAGAACTGTCAGGAGCCCAGAACCAACCCCAGGT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTCTGCAGTGCCAACTGTaGAAGGGCTGTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTLQCQL*KGCVQA
Trigger: GGCCTGCACACAGCCCTTCCACAGTTGGCACTGCAG...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCAGAGTTCCTTCACAGTaGCAATCACCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSRVPSQ*QSPAQP
Trigger: TGGCTGGGCAGGTGATTGTCACTGTGAAGGAACTCT...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCGCTGCTGTACCACGATaGCATCAATGCACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSAAVPR*HQCTQR
Trigger: TCTCTGGGTGCATTGATGTCATCGTGGTACAGCAGC...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCTCACCCAACTTCATGTaGAGATCCACTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSSPNFM*RSTALP
Trigger: CGGCAGTGCAGTGGATCTTCACATGAAGTTGGGTGA...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTTTCACCTCCAGCTCTaGATCACTCTTAGGACACGC +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPFHLQL*ITLRTR
Trigger: GCGTGTCCTAAGAGTGATTCAGAGCTGGAGGTGAAA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAGTCCATGGCAGAATCTaGGAGGCACTCGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLVHGRI*EALGAA
Trigger: AGCGGCACCGAGTGCCTCTCAGATTCTGCCATGGAC...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGAGTAGCAGAAGGAGCTaGACTCCGGGCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGASSRRS*TPGREK
Trigger: CTTTTCCCTGCCCGGAGTTCAGCTCCTTCTGCTACT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAGGGACCCTGACATCTaGAGACAGCCCTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLRDPDI*RQPWLQ
Trigger: CTGTAACCAGGGCTGTCTTCAGATGTCAGGGTCCCT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTCCTTCTCTGGGAACATaGGCCTTCCTAGGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIPSLGT*AFLGFA
Trigger: GGCAAAACCTAGGAAGGCTCATGTTCCCAGAGAAGG...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCTGTGTGGCCGGCTCTaGCGCTTCTCCCCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELILCGRL*RFSPAS
Trigger: TGAAGCGGGGGAGAAGCGGCAGAGCCGGCCACACAG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR GCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTAGGTTCGAGAAGCTCTaGCACAGATGTTGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIRFEKL*HRCWVA
Trigger: AGCGACCCAACATCTGTGGCAGAGCTTCTCGAACCT...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGTCACTGGCTGGCGGTaGCTCAGATTTTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSVTGWR*LRFSLL
Trigger: AAGGAGGGAAAATCTGAGGCACCGCCAGCCAGTGAC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACCACACCTTTCCCTGGTaGCATCTCTTCAGACACGAT +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNHTFPW*HLFRHD
Trigger: ATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTG...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTACGGAGGCAGCCTGCATaGTCCAGGTCTACACGAGCA +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLRRQPA*SRSTRA
Trigger: TGCTCGTGTAGACCTGGAGCATGCAGGCTGCCTCCG...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAGACCTTGGTGGACTCTaGGAATCCGCCCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLDLGGL*ESAPRP
Trigger: TGGACGTGGGGCGGATTCCCAGAGTCCACCAAGGTC...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCGTGTACCCAGGGCTCTaGGTTTGGGCTTCACTATGG +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIVYPGL*VWASLW
Trigger: CCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACAC...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTTCAGTTTTGCGATCTaGTCTGAGGAGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNFSFAI*SEERRR
Trigger: TCTCCGCCTCTCCTCAGACCAGATCGCAAAACTGAA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGAGCTTTGCTATACCCTaGTGGGTCCAGTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLSFAIP*WVQSLP
Trigger: GGGCAAAGACTGGACCCACCAGGGTATAGCAAAGCT...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGATGGAGACCAAGACCTaGGGTTGGTTCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAMETKT*GWFWAP
Trigger: AGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCAT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTATCGTTCTCTTTTGCTaGCCTTGGTGGACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCIVLFC*PWWTLG
Trigger: TCCCAGAGTCCACCAAGGTCAGCAAAAGAGAACGAT...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGAACACCTTTCTTCTTTaGCGGCGAGTCTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRNTFLL*RRVYFS
Trigger: GCTAAAGTAGACTCGCCGTCAAAGAAGAAAGGTGTT...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTTTCTCCATTTTCACTaGGGCCCCCGCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIFLHFH*GPRKGR
Trigger: TCTCCCTTTGCGGGGGCCTCAGTGAAAATGGAGAAA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCAGCGACAGGTGCCTTaGTACTGGGTTGTAATACTA +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPQRQVP*YWVVIL
Trigger: TAGTATTACAACCCAGTATCAAGGCACCTGTCGCTG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGAAGATAGCGCGAGGGTaGTGCTTCAACTCACCATCC +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAKIARG*CFNSPS
Trigger: GGATGGTGAGTTGAAGCATCACCCTCGCGCTATCTT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCGTGAACACTGATAGCTaGCATCCTGCTGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSVNTDS*HPAAVP
Trigger: TGGTACAGCAGCAGGATGGCAGCTATCAGTGTTCAC...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGATCACATGTGTCTTCTaGAGCAGCAGATGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAITCVF*SSRCGL
Trigger: CAGGCCGCATCTGCTGCTGCAGAAGACACATGTGAT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGGTTCGAGAAGCTCTaGCACAGATGTTGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSRFEKL*HRCWVA
Trigger: AGCGACCCAACATCTGTGGCAGAGCTTCTCGAACCT...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTATATGAAGTTGTGCTaGCGTGGCTCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIYMKLC*RGSGAL
Trigger: CAGAGCCCCTGAGCCACGGCAGCACAACTTCATATA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTTCTTATATGAAGTTGTaGTGCCGTGGCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPISYMKL*CRGSGA
Trigger: AGCCCCTGAGCCACGGCAGCACAACTTCATATAAGA...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAACAGGTAAATGGTCCCTaGACAGCGACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKQVNGP*TATGAL
Trigger: CAAGGCACCTGTCGCTGTGCAGGGACCATTTACCTG...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGGAACACTTCACTGTGTaGAGTGTTTTGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPREHFTV*SVLVHS
Trigger: AGAGTGGACCAAAACACTGCACACAGTGAAGTGTTC...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTAGAAGCCACCTCAACTaGCCAGTGGAAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIRSHLN*PVETGT
Trigger: TGTTCCAGTTTCCACTGGGCAGTTGAGGTGGCTTCT...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCCAGATGAGAGGAGGATaGTCTGTGGGGATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSQMRGG*SVGIFP
Trigger: GGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAGCTGGGGGAAGCTTTaGATGGGAGAAGGCTCATGT +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLSWGKL*MGEGSC
Trigger: ACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTTTTAAAGGGTTGGCCTaGACCTGCAGTGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIFKGLA*TCSANC
Trigger: ACAGTTGGCACTGCAGGTGCAGGCCAACCCTTTAAA...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTACTCGGGCCACTGCCTaGAACCGGGCTCCGATTCAC +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLTRATA*NRAPIH
Trigger: GTGAATCGGAGCCCGGTTCCAGGCAGTGGCCCGAGT...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTGCTTCCCACGGACTGTaGGGACTGGGAGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIASHGL*GLGARE
Trigger: CTCTCTGGCTCCCAGTCCCCACAGTCCGTGGGAAGC...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTCATTTGGGCCATCGTaGAGCTTCAGTTTTGCGATC +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPSFGPS*SFSFAI
Trigger: GATCGCAAAACTGAAGCTCCACGATGGCCCAAATGA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGTCTTTGCCCAGCTGTaGGAGAATCTGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSVFAQL*ENLSQS
Trigger: GCTTTGGGACAGATTCTCCCACAGCTGGGCAAAGAC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTGCCAGCATCACTGACTaGGCCCGCAGCAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLASITD*ARSSSG
Trigger: CCCTGAACTGCTGCGGGCCCAGTCAGTGATGCTGGC...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCTGGCACACCTTTCCCTaGTGCCATCTCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSWHTFP*CHLFRH
Trigger: GTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCA...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCTGGCACACCTTTCCCTaGTGCCATCTCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLWHTFP*CHLFRH
Trigger: GTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCA...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTACCAAGACCTGGGGTTaGTTCTGGGCTCCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTTKTWG*FWAPDS
Trigger: ACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCCCGAACGTGAAAAGGTaGACACTGATAGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSPNVKR*TLIAAI
Trigger: GATGGCAGCTATCAGTGTTCACCTTTTCACGTTCGG...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGTTTCACCTCCAGCTCTaGATCACTCTTAGGACACGC +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAFHLQL*ITLRTR
Trigger: GCGTGTCCTAAGAGTGATTCAGAGCTGGAGGTGAAA...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCATCGTTCTCTTTTGCTaGCCTTGGTGGACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIIVLFC*PWWTLG
Trigger: TCCCAGAGTCCACCAAGGTCAGCAAAAGAGAACGAT...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGATCCAAGACCCCTCTTTaGCGCTGCTTCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRSKTPL*RCFHGP
Trigger: GGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGA...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTCCTAGGTTTTGCCACTaGGAACTGTGTTTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCPRFCH*ELCLGD
Trigger: ATCCCCTAAACACAGTTCTCAGTGGCAAAACCTAGG...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAGCCGCTATCTGCAGCTaGGCTTCCCACGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRAAICS*ASHGLW
Trigger: CCACAGTCCGTGGGAAGCGCAGCTGCAGATAGCGGC...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAATATATGAAGTTGTGCTaGCGTGGCTCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKYMKLC*RGSGAL
Trigger: CAGAGCCCCTGAGCCACGGCAGCACAACTTCATATA...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCGGAATGGTAGAGCTTTaGTATACCCTGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLGMVEL*YTLVGP
Trigger: TGGACCCACCAGGGTATAGCAAAGCTCTACCATTCC...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTAGGCGGAGAACAAGCTaGTGGGGGACAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLRRRTS*WGTASG
Trigger: CCCTGATGCTGTCCCCCAGCAGCTTGTTCTCCGCCT...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGCAGATGAGAGGAGGATaGTCTGTGGGGATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQQMRGG*SVGIFP
Trigger: GGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTACTCAACCGCCTATCTaGATTTCGGAGGCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTTQPPI*ISEASL
Trigger: TAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTTGTCCCAAGGCAAGATaGTTTCCAAAGGCCCACACC +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVCPKAR*FPKAHT
Trigger: GGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACA...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGAGCTGGGGGAAGCTTTaGATGGGAGAAGGCTCATGT +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQSWGKL*MGEGSC
Trigger: ACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCT...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCCTGTCTGGGGATAGGTaGTCTCTAAAGGGGACCAAT +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSLSGDR*SLKGTN
Trigger: ATTGGTCCCCTTTAGAGACCACCTATCCCCAGACAG...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTGCTGCGTTGGGAAGGTaGTCAGCATCTAACATAGAT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIAALGR*SASNID
Trigger: ATCTATGTTAGATGCTGACCACCTTCCCAACGCAGC...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTCCCTCCTTGGATTCTaGCAGCTGTTTGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTISLLGF*QLFGHA
Trigger: AGCATGACCAAACAGCTGCCAGAATCCAAGGAGGGA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGCACCGGCCGGCTCCTTaGAGCTGGATGGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEHRPAP*SWMAGH
Trigger: GTGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGTG...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAGAAGTTGTGCTGCCGTaGCTCAGGGGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTREVVLP*LRGSVG
Trigger: CCCCACAGAGCCCCTGAGCCACGGCAGCACAACTTC...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTTCATTTGGGCCATCGTaGAGCTTCAGTTTTGCGATC +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCSFGPS*SFSFAI
Trigger: GATCGCAAAACTGAAGCTCCACGATGGCCCAAATGA...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCAAACACAACATCATTTaGGCCATCGTGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPKHNII*AIVELQ
Trigger: CTGAAGCTCCACGATGGCCCAAATGATGTTGTGTTT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTAGCTTTGCTATACCCTaGTGGGTCCAGTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTSFAIP*WVQSLP
Trigger: GGGCAAAGACTGGACCCACCAGGGTATAGCAAAGCT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCTCTATCACTTCTCTGTaGAAGGCGGAGAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSSITSL*KAENKL
Trigger: CAGCTTGTTCTCCGCCTTCCACAGAGAAGTGATAGA...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGACCGAGCCTGAGCAGCTaGCCTGGGAAGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRPSLSS*PGKAKE
Trigger: CTCCTTTGCCTTCCCAGGCCAGCTGCTCAGGCTCGG...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACCTCAACTGCCCAGTaGAAACTGGAACACTTCACT +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPITSTAQ*KLEHFT
Trigger: AGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGT...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAGGGTCCTGCCCAACTTaGCCCACTGGAGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRGSCPT*PTGAAD
Trigger: GTCAGCTGCTCCAGTGGGCCAAGTTGGGCAGGACCC...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCTGCAGTGCCAACTGTaGAAGGGCTGTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELILQCQL*KGCVQA
Trigger: GGCCTGCACACAGCCCTTCCACAGTTGGCACTGCAG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGGAATTACCCGAAAATaGGTATTTTCTGATGGTGTA +
Preference number: 4 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRGITRK*VFSDGV
Trigger: TACACCATCAGAAAATACTCATTTTCGGGTAATTCC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCCCTTGGGGTTCACGGTaGATATTCTACAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLPWGSR*IFYSLE
Trigger: TTCCAGACTGTAGAATATTCACCGTGAACCCCAAGG...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGCCTTGGGGTTCACGGTaGATATTCTACAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAPWGSR*IFYSLE
Trigger: TTCCAGACTGTAGAATATTCACCGTGAACCCCAAGG...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCAGACCTGCCGAGCCTaGGCAGCTGGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTQTCRA*AAGLGR
Trigger: CCTTCCCAGGCCAGCTGCTCAGGCTCGGCAGGTCTG...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTGCAGTTCAGGGACCCTaGCATCTGAAGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIAVQGP*HLKTAL
Trigger: CAGGGCTGTCTTCAGATGTCAGGGTCCCTGAACTGC...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGGTGAACACTGATAGCTaGCATCCTGCTGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQVNTDS*HPAAVP
Trigger: TGGTACAGCAGCAGGATGGCAGCTATCAGTGTTCAC...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCATGTGAAGATCCACTaGACTGCCGTTGATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPHVKIH*TAVDFY
Trigger: ATAGAAATCAACGGCAGTGCAGTGGATCTTCACATG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATTCTGCAGCAGCAGATaGGGCCTGCTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLFCSSR*GLLFLL
Trigger: AAGAAGGAAGAGCAGGCCGCATCTGCTGCTGCAGAA...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTGCCGCTATCTGCAGCTaGGCTTCCCACGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLAAICS*ASHGLW
Trigger: CCACAGTCCGTGGGAAGCGCAGCTGCAGATAGCGGC...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAAGGCGGAGAACAAGCTaGTGGGGGACAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQRRRTS*WGTASG
Trigger: CCCTGATGCTGTCCCCCAGCAGCTTGTTCTCCGCCT...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAGGAAAAGCGGAATTCTaGTCCTTACTGAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKGKAEF*SLLRRG
Trigger: CCCCCTTCTCAGTAAGGAGCAGAATTCCGCTTTTCC...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTGGAAAAGCGGAATTCTaGTCCTTACTGAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVGKAEF*SLLRRG
Trigger: CCCCCTTCTCAGTAAGGAGCAGAATTCCGCTTTTCC...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAGCCCACCCACTGAGGTaGCGCCTCAAGACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQAHPLR*RLKTGH
Trigger: ATGACCTGTCTTGAGGCGGCACCTCAGTGGGTGGGC...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCTGCAGATCCCTCTCTaGTCAGGAACCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELILQIPL*SGTTTS
Trigger: GGACGTGGTGGTTCCTGAGCAGAGAGGGATCTGCAG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACGGAGGCAGCCTGCATaGTCCAGGTCTACACGAGCA +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQRRQPA*SRSTRA
Trigger: TGCTCGTGTAGACCTGGAGCATGCAGGCTGCCTCCG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGATGTGGAAGGGCTGTGTaGAGGCCCCACAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRCGRAV*RPHSCR
Trigger: CCTGCAACTGTGGGGCCTGCACACAGCCCTTCCACA...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCCAACTACAATGTAATTaGAGGGAAGAGCCGATGTTG +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPQLQCN*REEPML
Trigger: CAACATCGGCTCTTCCCTCCAATTACATTGTAGTTG...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGGTTTGGGCTTCACTATaGTACAGACAGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLVWASL*YRQCLP
Trigger: TGGAAGACACTGTCTGTACCATAGTGAAGCCCAAAC...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGGCTTCCCACGGACTGTaGGGACTGGGAGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEASHGL*GLGARE
Trigger: CTCTCTGGCTCCCAGTCCCCACAGTCCGTGGGAAGC...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTTAGGCAAGCTCTTCTaGAATACTTGCAAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPLGKLF*NTCKLR
Trigger: CCTTAGCTTGCAAGTATTCCAGAAGAGCTTGCCTAA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGGCGACCAGATTTCTTTaGCATCTTGTCTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLATRFL*HLVFHP
Trigger: TGGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGC...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTGCGACCAGATTTCTTTaGCATCTTGTCTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIATRFL*HLVFHP
Trigger: TGGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGC...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGTTCAGTTTTGCGATCTaGTCTGAGGAGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQFSFAI*SEERRR
Trigger: TCTCCGCCTCTCCTCAGACCAGATCGCAAAACTGAA...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGAAACACAACATCATTTaGGCCATCGTGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLKHNII*AIVELQ
Trigger: CTGAAGCTCCACGATGGCCCAAATGATGTTGTGTTT...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCCCGCTGGGGAAGGCTaGTATCTGAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIPAGEG*YLRSAE
Trigger: TTCTGCTGACCTCAGATACCAGCCTTCCCCAGCGGG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTAGCACCCGTCCCCGCTaGGGAAGGCTGGTATCTGAG +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLSTRPR*GRLVSE
Trigger: CTCAGATACCAGCCTTCCCCAGCGGGGACGGGTGCT...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGCCGAGCCTGAGCAGCTaGCCTGGGAAGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEPSLSS*PGKAKE
Trigger: CTCCTTTGCCTTCCCAGGCCAGCTGCTCAGGCTCGG...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACATCAACTATTTAAGCTaGGGGAAGCTTTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNINYLS*GKLCMG
Trigger: TCCCATGCAAAGCTTCCCCCAGCTTAAATAGTTGAT...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGTCCCACATAATTCATaGTTTGAGACCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSVPHNS*FETTGA
Trigger: AGCCCCTGTGGTCTCAAACCATGAATTATGTGGGAC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677752.1
CDS-3UTR TCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTCCACTGCACTGCCGTTaGTTTCTATATCAATCACTT +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCPLHCR*FLYQSL
Trigger: AAGTGATTGATATAGAAATCAACGGCAGTGCAGTGG...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAGTAGCTGTCCTAGGATaGTGGTCAGATCGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKVAVLG*WSDRSL
Trigger: AAGAGAACGATCTGACCATCATCCTAGGACAGCTAC...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTGTAGCTGTCCTAGGATaGTGGTCAGATCGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVVAVLG*WSDRSL
Trigger: AAGAGAACGATCTGACCATCATCCTAGGACAGCTAC...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTTGTAGCCATTCTCATTaGTGGAATGGTAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCCSHSH*WNGRAL
Trigger: CAAAGCTCTACCATTCCATCAATGAGAATGGCTACA...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCCAGCCTGTGATACGATaGCTTGTTTCCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIQPVIR*LVSFGS
Trigger: AGAACCAAAGGAAACAAGTCATCGTATCACAGGCTG...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTTTTCTTCCTTTAAAATaGTGCAATGGAAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIFLPLK*CNGRRP
Trigger: GGGCCTCCTTCCATTGCATCATTTTAAAGGAAGAAA...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCATACGAGACTTAGACTaGACTGCAAAGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSIRDLD*TAKRER
Trigger: CCTTTCCCTCTTTGCAGTTCAGTCTAAGTCTCGTAT...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTACAGTGACAATCACCTaGCCAGCCAGCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELITVTIT*PASCPT
Trigger: TGTGGGACAGCTGGCTGGGCAGGTGATTGTCACTGT...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTAGAAGGGGGAACACATaGTCCACGAGCTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIRRGNT*STSSLS
Trigger: GCTGAGTGAGCTCGTGGAGCATGTGTTCCCCCTTCT...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAAGCAGAAGAGCCAGCTaGCTTCCCTTGCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRSRRAS*LPLLWG
Trigger: TCCCCACAGCAAGGGAAGGCAGCTGGCTCTTCTGCT...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCAAGCAAGCTTCACTGTaGTTCCCTGACAAATCTGAA +
Preference number: 4 (lower is better)
Translates to: PLFDAASTGPITGCDPKSKQASL*FPDKSE
Trigger: TTCAGATTTGTCAGGGAAGCACAGTGAAGCTTGCTT...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACTGCAGATCCCTCTCTaGTCAGGAACCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQLQIPL*SGTTTS
Trigger: GGACGTGGTGGTTCCTGAGCAGAGAGGGATCTGCAG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAGACTTAGACTGAACTaGAAAGAGGGAAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLRLRLN*KEGKGH
Trigger: ATGGCCCTTTCCCTCTTTGCAGTTCAGTCTAAGTCT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGATGGCAGGTCACTGGCTaGCGGTGCCTCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRWQVTG*RCLRFS
Trigger: GGAAAATCTGAGGCACCGCCAGCCAGTGACCTGCCA...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCTCCTTGGAGCTGGATaGCAGGTCACTGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPLLGAG*QVTGWR
Trigger: CCGCCAGCCAGTGACCTGCCATCCAGCTCCAAGGAG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCGGAGAACAAGCTGCTaGGGGACAGCATCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPRRTSC*GTASGG
Trigger: GCCCCCTGATGCTGTCCCCCAGCAGCTTGTTCTCCG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAGGCATAGACATCATTTaGACGGTTTCCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKGIDII*TVSKGS
Trigger: GCTGCCTTTGGAAACCGTCCAAATGATGTCTATGCC...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAAAAGTCACACACTGCTaGCCAGTGCCTTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKKVTHC*PVPLSK
Trigger: CTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTT...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTAAAGTCACACACTGCTaGCCAGTGCCTTTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTKVTHC*PVPLSK
Trigger: CTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGCCACTGCACTGCCGTTaGTTTCTATATCAATCACTT +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAPLHCR*FLYQSL
Trigger: AAGTGATTGATATAGAAATCAACGGCAGTGCAGTGG...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATTTCAAGGAAGCATTTaGAGATCCTCGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLFQGSI*RSSCCL
Trigger: CAGGCAGCACGAGGATCTTCAAATGCTTCCTTGAAA...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAAGTAGCAGAAGGAGCTaGACTCCGGGCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQSSRRS*TPGREK
Trigger: CTTTTCCCTGCCCGGAGTTCAGCTCCTTCTGCTACT...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTCTCCTTCCAGGAGCTaGGCTGCAGACCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTSPSRS*AADLPS
Trigger: GCTCGGCAGGTCTGCAGCTCAGCTCCTGGAAGGAGA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCTTTCTTCCTTTAAAATaGTGCAATGGAAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLFLPLK*CNGRRP
Trigger: GGGCCTCCTTCCATTGCATCATTTTAAAGGAAGAAA...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATCTTCAGACACGATGTaGGCTCATTACAACCGCATC +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLSSDTM*AHYNRI
Trigger: GATGCGGTTGTAATGAGCTCACATCGTGTCTGAAGA...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCCTTCTCTGGGAACATaGGCCTTCCTAGGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIPSLGT*AFLGFA
Trigger: GGCAAAACCTAGGAAGGCTCATGTTCCCAGAGAAGG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTGTCTCCATCCCCTaGACTGTGTGGCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTPVSIP*TVWPAL
Trigger: CAGAGCCGGCCACACAGTGCAGGGGATGGAGACAGG...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCCATGTGAAGATCCACTaGACTGCCGTTGATTTCTAT +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSHVKIH*TAVDFY
Trigger: ATAGAAATCAACGGCAGTGCAGTGGATCTTCACATG...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCCTCTTCTGGAATACTTaGAAGCTAAGGATCATGGGA +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLLFWNT*KLRIMG
Trigger: TCCCATGATCCTTAGCTTGCAAGTATTCCAGAAGAG...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGGCAGCTGTTTGGTCATaGTTTCTCTCTTTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQAAVWS*FLSFAK
Trigger: TTTGGCGAAAGAGAGAAAGCATGACCAAACAGCTGC...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACAGGTAAATGGTCCCTaGACAGCGACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQQVNGP*TATGAL
Trigger: CAAGGCACCTGTCGCTGTGCAGGGACCATTTACCTG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTGGGTCATGTCGGCCATaGCGATGGCACGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QGLSTLQSGKITTPISLSGSCRP*RWHEPS
Trigger: GCTCGGCTCGTGCCATCGGCATGGCCGACATGACCC...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAAGCAAGCTTCACTGTaGTTCCCTGACAAATCTGAA +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLKQASL*FPDKSE
Trigger: TTCAGATTTGTCAGGGAAGCACAGTGAAGCTTGCTT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCTTTCAACATTGTCTCTaGATCCGACAAGCACTAGGA +
Preference number: 4 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLFQHCL*IRQALG
Trigger: TCCTAGTGCTTGTCGGATGCAGAGACAATGTTGAAA...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACGTCCCACATAATTCATaGTTTGAGACACAATCAACT +
Preference number: 4 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNVPHNS*FETQST
Trigger: AGTTGATTGTGTCTCAAACCATGAATTATGTGGGAC...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CCA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCAGACAGTGTCTTCCATaGAAGCATCCTTCTCAACTT +
Preference number: 4 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIRQCLP*KHPSQL
Trigger: AAGTTGAGAAGGATGCTTCCATGGAAGACACTGTCT...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAGTGTACCCAGGGCTCTaGGTTTGGGCTTCACTATGG +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQVYPGL*VWASLW
Trigger: CCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACAC...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGATTCTGGCAGCTGTTTaGTCATGCTTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAILAAV*SCFLSF
Trigger: GAAAGAGAGAAAGCATGACCAAACAGCTGCCAGAAT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGAACCGCATCAGTAAATaGAGCTACCATGTATATTTT +
Preference number: 4 (lower is better)
Translates to: RGCSGPALPSHPISFVPRNRISK*SYHVYF
Trigger: AAAATATACATGGTAGCTCCATTTACTGATGCGGTT...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTAGCCTATGTACCCACTaGATCAATCTGCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTSLCTH*INLQQQ
Trigger: TTGTTGCTGCAGATTGATCCAGTGGGTACATAGGCT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAAGAGTTCCTTCACAGTaGCAATCACCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRRVPSQ*QSPAQP
Trigger: TGGCTGGGCAGGTGATTGTCACTGTGAAGGAACTCT...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCTCCATGTGAGACTCTaGTCTGAGCAGGCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPLHVRL*SEQALR
Trigger: GCGGAGAGCCTGCTCAGATCAGAGTCTCACATGGAG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAATCACATGTGTCTTCTaGAGCAGCAGATGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQITCVF*SSRCGL
Trigger: CAGGCCGCATCTGCTGCTGCAGAAGACACATGTGAT...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTGGAATGGTAGAGCTTTaGTATACCCTGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIGMVEL*YTLVGP
Trigger: TGGACCCACCAGGGTATAGCAAAGCTCTACCATTCC...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAAGACTTAGACTGAACTaGAAAGAGGGAAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLRLRLN*KEGKGH
Trigger: ATGGCCCTTTCCCTCTTTGCAGTTCAGTCTAAGTCT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTTTTTTCTTCTCTGGCTaGGTACGGCCTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLFFFSG*VRPEDD
Trigger: GTCATCCTCAGGCCGTACCCAGCCAGAGAAGAAAAA...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACTCTGCCACAGATGTTaGGTCGCTCATCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQLCHRC*VAHLCT
Trigger: GGTACACAGATGAGCGACCCAACATCTGTGGCAGAG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTTCCCTCCTTGGATTCTaGCAGCTGTTTGGTCATGCT +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLSLLGF*QLFGHA
Trigger: AGCATGACCAAACAGCTGCCAGAATCCAAGGAGGGA...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCATTCTCGGCCGGCCTaGCACCGGCCGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMHSRPA*HRPAPW
Trigger: CCAAGGAGCCGGCCGGTGCCAGGCCGGCCGAGAATG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGACCAAGACCTGGGGTTaGTTCTGGGCTCCTGACAGT +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDETKTWG*FWAPDS
Trigger: ACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGT...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CAA 72 bp CGCGAGGGTGATGCTTCAACTCACCATCCTAAGGGTTaGTGTACAAACACACTCGAGGGCATCTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: REGDASTHHPKG*CTNTLEGISFT
Trigger: TGTGAAAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAGCATCACCCTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACCGAACGTGAAAAGGTaGACACTGATAGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQPNVKR*TLIAAI
Trigger: GATGGCAGCTATCAGTGTTCACCTTTTCACGTTCGG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGACAGTGTAGCAGGAAATaGGGCGACCAGAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRQCSRK*GDQRRN
Trigger: GTTTCTTCTCTGGTCGCCTCATTTCCTGCTACACTG...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACCCGATTACAGGGTGTaGTCCCAAAAGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQPDYRV*SQKPKS
Trigger: TGACTTTGGCTTTTGGGATCACACCCTGTAATCGGG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTCCTAGGTTTTGCCACTaGGAACTGTGTTTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLPRFCH*ELCLGD
Trigger: ATCCCCTAAACACAGTTCTCAGTGGCAAAACCTAGG...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAATCTTATATGAAGTTGTaGTGCCGTGGCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQSYMKL*CRGSGA
Trigger: AGCCCCTGAGCCACGGCAGCACAACTTCATATAAGA...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGATTTAAAGGGTTGGCCTaGACCTGCAGTGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRFKGLA*TCSANC
Trigger: ACAGTTGGCACTGCAGGTGCAGGCCAACCCTTTAAA...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGCCGGAAGTCTGTTTTTaGCAACTTGTAAAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: QPPICISEASLKAELLGAPEVCF*QLVKSE
Trigger: TTCACTTTTTACAAGTTGGCAAAAACAGACTTCCGG...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGACTGTCTGGGGATAGGTaGTCTCTAAAGGGGACCAAT +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRLSGDR*SLKGTN
Trigger: ATTGGTCCCCTTTAGAGACCACCTATCCCCAGACAG...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAAGACAGTGTCTTCCATaGAAGCATCCTTCTCAACTT +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLRQCLP*KHPSQL
Trigger: AAGTTGAGAAGGATGCTTCCATGGAAGACACTGTCT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTCGTCAGGCAAGTCCATaGCAGAATCTGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLRQASP*QNLRGT
Trigger: AGTGCCTCTCAGATTCTGCCATGGACTTGCCTGACG...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATTAGGCAAGCTCTTCTaGAATACTTGCAAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLLGKLF*NTCKLR
Trigger: CCTTAGCTTGCAAGTATTCCAGAAGAGCTTGCCTAA...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAATTCTGGCAGCTGTTTaGTCATGCTTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLILAAV*SCFLSF
Trigger: GAAAGAGAGAAAGCATGACCAAACAGCTGCCAGAAT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTGGATGGCAGGTCACTaGCTGGCGGTGCCTCAGATT +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTWMAGH*LAVPQI
Trigger: AATCTGAGGCACCGCCAGCCAGTGACCTGCCATCCA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTACCTCAACTGCCCAGTaGAAACTGGAACACTTCACT +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELITSTAQ*KLEHFT
Trigger: AGTGAAGTGTTCCAGTTTCCACTGGGCAGTTGAGGT...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGAACCGCATCAGTAAATaGAGCTACCATGTATATTTT +
Preference number: 4 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLNRISK*SYHVYF
Trigger: AAAATATACATGGTAGCTCCATTTACTGATGCGGTT...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTCTGTGTTCTCGCCAATaGAGACCAAGACCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLLCSRQ*RPRPGV
Trigger: AACCCCAGGTCTTGGTCTCCATTGGCGAGAACACAG...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGATTTCAAGGAAGCATTTaGAGATCCTCGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRFQGSI*RSSCCL
Trigger: CAGGCAGCACGAGGATCTTCAAATGCTTCCTTGAAA...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTCAGTGTAGCAGGAAATaGGGCGACCAGAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLQCSRK*GDQRRN
Trigger: GTTTCTTCTCTGGTCGCCTCATTTCCTGCTACACTG...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAAGTCCAGGGTTTTCTaGAAATTCGTGATAAGTAAT +
Preference number: 4 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSKSRVF*KFVISN
Trigger: ATTACTTATCACGAATTTGCAGAAAACCCTGGACTT...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTAGCAGGAAACATGTGTaGGACCCACAAAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLSRKHV*DPQRRD
Trigger: ATCCCTCCTTTGTGGGTCGCACACATGTTTCCTGCT...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCTGTCCCAAGGCAAGATaGTTTCCAAAGGCCCACACC +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPCPKAR*FPKAHT
Trigger: GGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACA...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGCCAAAGTCACACACTaGTGGCCAGTGCCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPAKVTH*WPVPLS
Trigger: GCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTGACGGCTATCACACGTaGCTTCACACTGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLDGYHT*LHTVLF
Trigger: AAAAAGAACAGTGTGAAGCCACGTGTGATAGCCGTC...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAATATTCTTTAAAGGGTTaGCCTGCACCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQYSLKG*PAPAVP
Trigger: TGGCACTGCAGGTGCAGGCCAACCCTTTAAAGAATA...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTTGTGAGACTCTGATCTaGGCAGGCTCTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QGLSTLQSGKITTPISLSCETLI*AGSPQV
Trigger: AACCTGCGGAGAGCCTGCTCAGATCAGAGTCTCACA...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGAATTCTGCTCCTTACTaGGAAGGGGGAACACATGCT +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDENSAPY*EGGTHA
Trigger: AGCATGTGTTCCCCCTTCTCAGTAAGGAGCAGAATT...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCCCGATTACAGGGTGTaGTCCCAAAAGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPPDYRV*SQKPKS
Trigger: TGACTTTGGCTTTTGGGATCACACCCTGTAATCGGG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCTGAGAGGCACTCGGTaGCGCTATCTGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMLRGTR*RYLQLR
Trigger: GCGCAGCTGCAGATAGCGGCACCGAGTGCCTCTCAG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp AATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCACACCAGGCAGCAAGCAGAAGTCCAGGGTTTTCTaGAAATTCGTGATAAGTAAT +
Preference number: 4 (lower is better)
Translates to: NPVPRQDAFQRPTPGSKQKSRVF*KFVISN
Trigger: ATTACTTATCACGAATTTGCAGAAAACCCTGGACTT...CTGCTTGCTGCCTGGTGTGGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCTCTTCTGGAATACTTaGAAGCTAAGGATCATGGGA +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELILFWNT*KLRIMG
Trigger: TCCCATGATCCTTAGCTTGCAAGTATTCCAGAAGAG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCAGTTCCACAGGTAAATaGTCCCTGCACAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTSSTGK*SLHSDR
Trigger: CCTGTCGCTGTGCAGGGACCATTTACCTGTGGAACT...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCTGCCCAGTGGAAACTaGAACACTTCACTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPLPSGN*NTSLCA
Trigger: TGCACACAGTGAAGTGTTCCAGTTTCCACTGGGCAG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAACAAGCACTAGGAAAATaGCTGAAATCAGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQQALGK*LKSVRD
Trigger: GTCCCTGACTGATTTCAGCCATTTTCCTAGTGCTTG...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTTGTACCAAATGGCAATaGATTTTCAGCACAAACTTA +
Preference number: 4 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTCTKWQ*IFSTNL
Trigger: TAAGTTTGTGCTGAAAATCCATTGCCATTTGGTACA...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGTATTCTTTAAAGGGTTaGCCTGCACCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEYSLKG*PAPAVP
Trigger: TGGCACTGCAGGTGCAGGCCAACCCTTTAAAGAATA...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
3UTR CAA 72 bp ATTAGTCCTTATCAACTATTTAAGCTGGGGGAAGCTTaGCATGGGAGAAGGCTCATGTGGTCCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ISPYQLFKLGEA*HGRRLMWSLLW
Trigger: CCAGAGAAGGGACCACATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCTTAAATAGTTGATAAGGACTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTGCTGCTGTACCACGATaGCATCAATGCACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QGLSTLQSGKITTPISLSAAVPR*HQCTQR
Trigger: TCTCTGGGTGCATTGATGTCATCGTGGTACAGCAGC...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGAACACCTTTCTTCTTTaGCGGCGAGTCTACTTTAGC +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDENTFLL*RRVYFS
Trigger: GCTAAAGTAGACTCGCCGTCAAAGAAGAAAGGTGTT...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCAATTCTGCTCCTTACTaGGAAGGGGGAACACATGCT +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPNSAPY*EGGTHA
Trigger: AGCATGTGTTCCCCCTTCTCAGTAAGGAGCAGAATT...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTTTCTGCAGCAGCAGATaGGGCCTGCTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QGLSTLQSGKITTPISLSFCSSR*GLLFLL
Trigger: AAGAAGGAAGAGCAGGCCGCATCTGCTGCTGCAGAA...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTGCAGCTGTTTGGTCATaGTTTCTCTCTTTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLAAVWS*FLSFAK
Trigger: TTTGGCGAAAGAGAGAAAGCATGACCAAACAGCTGC...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGGAACACTTCACTGTGTaGAGTGTTTTGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEEHFTV*SVLVHS
Trigger: AGAGTGGACCAAAACACTGCACACAGTGAAGTGTTC...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGCTGCGTTGGGAAGGTaGTCAGCATCTAACATAGAT +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPAALGR*SASNID
Trigger: ATCTATGTTAGATGCTGACCACCTTCCCAACGCAGC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTCCAAAGCATCCGACTTaGTTATTGTCCCATCAATAT +
Preference number: 4 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLPKHPT*LLSHQY
Trigger: ATATTGATGGGACAATAACCAAGTCGGATGCTTTGG...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCCAAAGCATCCGACTTaGTTATTGTCCCATCAATAT +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIPKHPT*LLSHQY
Trigger: ATATTGATGGGACAATAACCAAGTCGGATGCTTTGG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCTCCATGTGAGACTCTaGTCTGAGCAGGCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMLHVRL*SEQALR
Trigger: GCGGAGAGCCTGCTCAGATCAGAGTCTCACATGGAG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTGGAATTACCCGAAAATaGGTATTTTCTGATGGTGTA +
Preference number: 4 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIGITRK*VFSDGV
Trigger: TACACCATCAGAAAATACTCATTTTCGGGTAATTCC...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CTTCAACTCACCATCCTAAGGGTTTGTGTACAAACACACTCGAGGGCATCTCTTTGTAGCCATTCTCATTaGTGGAATGGTAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LQLTILRVCVQTHSRASLCSHSH*WNGRAL
Trigger: CAAAGCTCTACCATTCCATCAATGAGAATGGCTACA...AAGAGATGCCCTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTGAGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCCAGCCTGTGATACGATaGCTTGTTTCCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPQPVIR*LVSFGS
Trigger: AGAACCAAAGGAAACAAGTCATCGTATCACAGGCTG...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTCTTCAGACACGATGTaGGCTCATTACAACCGCATC +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTSSDTM*AHYNRI
Trigger: GATGCGGTTGTAATGAGCTCACATCGTGTCTGAAGA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGTTTGGGCTTCACTATaGTACAGACAGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPVWASL*YRQCLP
Trigger: TGGAAGACACTGTCTGTACCATAGTGAAGCCCAAAC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCCAGGTTTATGGGACTaGGCTCAGTGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMPGLWD*AQWLWC
Trigger: GCACCAGAGCCACTGAGCCCAGTCCCATAAACCTGG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGATCAACTATTTAAGCTaGGGGAAGCTTTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEINYLS*GKLCMG
Trigger: TCCCATGCAAAGCTTCCCCCAGCTTAAATAGTTGAT...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGGCAGCAGATGCGGCCTaGTCTTCCTTCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMAADAA*SSFLLS
Trigger: GGACAGTAAGAAGGAAGAGCAGGCCGCATCTGCTGC...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGAAAACGGAGGCAGCCTaGATGCTCCAGGTCTACACG +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMKTEAA*MLQVYT
Trigger: CGTGTAGACCTGGAGCATGCAGGCTGCCTCCGTTTT...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGTCACCCAACTTCATGTaGAGATCCACTGCACTGCCG +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMSPNFM*RSTALP
Trigger: CGGCAGTGCAGTGGATCTTCACATGAAGTTGGGTGA...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTGAGATGTCTGAACTCTaGGATGGTGTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QGLSTLQSGKITTPISLSEMSEL*DGVSSP
Trigger: TGGAGATGAAACACCATCTCAGAGTTCAGACATCTC...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTTTCAACATTGTCTCTaGATCCGACAAGCACTAGGA +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTFQHCL*IRQALG
Trigger: TCCTAGTGCTTGTCGGATGCAGAGACAATGTTGAAA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCTCTGCCACAGATGTTaGGTCGCTCATCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMLCHRC*VAHLCT
Trigger: GGTACACAGATGAGCGACCCAACATCTGTGGCAGAG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp CAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCCTATTTCTCTATCTCAAGCACTAGGAAAATaGCTGAAATCAGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QGLSTLQSGKITTPISLSQALGK*LKSVRD
Trigger: GTCCCTGACTGATTTCAGCCATTTTCCTAGTGCTTG...AGATAGAGAAATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR GCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCACACCTTTCCCTGGTaGCATCTCTTCAGACACGAT +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMHTFPW*HLFRHD
Trigger: ATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCTTCAACTCTCCAATCTaGAAAAATAACCACCCCTAT +
Preference number: 4 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPFNSPI*KNNHPY
Trigger: ATAGGGGTGGTTATTTTTCCAGATTGGAGAGTTGAA...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR TCA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGGAGATGTCTGAACTCTaGGATGGTGTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMEMSEL*DGVSSP
Trigger: TGGAGATGAAACACCATCTCAGAGTTCAGACATCTC...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CCA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTGTACCAAATGGCAATaGATTTTCAGCACAAACTTA +
Preference number: 4 (lower is better)
Translates to: MAEISQGLSTLQSGKITTCTKWQ*IFSTNL
Trigger: TAAGTTTGTGCTGAAAATCCATTGCCATTTGGTACA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 90 bp CCCTTGCTGTGGGGAGGGGGACCAAGCCCTGCCCACCCACTGAGGTaGCGCCTCAAGACAGGTCATCCAGGTCCACTTCAGGGATCGGGT +
Preference number: 5 (lower is better)
Translates to: PLLWGGGPSPAHPLR*RLKTGHPGPLQGSG
Trigger: ACCCGATCCCTGAAGTGGACCTGGATGACCTGTCTTGAGGCGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCTCCCCACAGCAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 90 bp AAGAGCCAGCTGCCTTCCCTTGCTGTGGGGAGGGGGACCAAGCCCTaGCCACCCACTGAGGTGCCGCCTCAAGACAGGTCATCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KSQLPSLAVGRGTKP*PPTEVPPQDRSSRS
Trigger: GGACCTGGATGACCTGTCTTGAGGCGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCTCCCCACAGCAAGGGAAGGCAGCTGGCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 90 bp TCGGTGCCGCTATCTGCAGCTGCGCTTCCCACGGACTGTGGGGACTaGGAGCCAGAGAGTGTGTCAGACTCGGGCCACTGCCTGGAACCG +
Preference number: 5 (lower is better)
Translates to: SVPLSAAALPTDCGD*EPESVSDSGHCLEP
Trigger: CGGTTCCAGGCAGTGGCCCGAGTCTGACACACTCTCTGGCTCCCAGTCCCCACAGTCCGTGGGAAGCGCAGCTGCAGATAGCGGCACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 90 bp GAGGCACTCGGTGCCGCTATCTGCAGCTGCGCTTCCCACGGACTGTaGGGACTGGGAGCCAGAGAGTGTGTCAGACTCGGGCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: EALGAAICSCASHGL*GLGARECVRLGPLP
Trigger: AGGCAGTGGCCCGAGTCTGACACACTCTCTGGCTCCCAGTCCCCACAGTCCGTGGGAAGCGCAGCTGCAGATAGCGGCACCGAGTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 90 bp GTCATTCTCGGCCGGCCTGGCACCGGCCGGCTCCTTGGAGCTGGATaGCAGGTCACTGGCTGGCGGTGCCTCAGATTTTCCCTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: VILGRPGTGRLLGAG*QVTGWRCLRFSLLG
Trigger: TCCAAGGAGGGAAAATCTGAGGCACCGCCAGCCAGTGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGTGCCAGGCCGGCCGAGAATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGGTGCAGGCCCCACAGTaGCAGGGGCTGTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLVQAPQ*QGLFRA
Trigger: GGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCAC...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTGCACCGGCCGGCTCCTaGGAGCTGGATGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIAPAGS*ELDGRS
Trigger: TGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGTGC...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp CCCGCAAAGGGAGAGGGTAACGTCAGGCAAGTCCATGGCAGAATCTaGGAGGCACTCGGTGCCGCTATCTGCAGCTGCGCTTCCCACGGA +
Preference number: 5 (lower is better)
Translates to: PAKGEGNVRQVHGRI*EALGAAICSCASHG
Trigger: TCCGTGGGAAGCGCAGCTGCAGATAGCGGCACCGAGTGCCTCTCAGATTCTGCCATGGACTTGCCTGACGTTACCCTCTCCCTTTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp CTCTGTGGGGATGGGGTCCACTGTGATGGATTCTTCGAGCTCCTGTaGTCCCTCGTCACTCGAGGAGTCATTCTCGGCCGGCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LCGDGVHCDGFFELL*SLVTRGVILGRPGT
Trigger: GGTGCCAGGCCGGCCGAGAATGACTCCTCGAGTGACGAGGGATCACAGGAGCTCGAAGAATCCATCACAGTGGACCCCATCCCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGCTGCCTGGGCCCCCTaGTCATCATCGGAGCTCACG +
Preference number: 5 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSAAWAP*SSSELT
Trigger: CGTGAGCTCCGATGATGACAAGGGGGCCCAGGCAGC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCCTCCAAGACCCCTCTTaGACGCTGCTTCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: PLFDAASTGPITGCDPKSLQDPS*TLLPRA
Trigger: GGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAG...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 90 bp ACCGGCCGGCTCCTTGGAGCTGGATGGCAGGTCACTGGCTGGCGGTaGCTCAGATTTTCCCTCCTTGGATTCTGGCAGCTGTTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: TGRLLGAGWQVTGWR*LRFSLLGFWQLFGH
Trigger: ATGACCAAACAGCTGCCAGAATCCAAGGAGGGAAAATCTGAGGCACCGCCAGCCAGTGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCACTTTAGCTGCCGGTTaGGATTCTGAGGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPTLAAG*DSEGAS
Trigger: GGAGGCGCCCTCAGAATCCAAACCGGCAGCTAAAGT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGCCCAGGGCTCTGGGTTaGGGCTTCACTATGGTACAG +
Preference number: 5 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLPRALG*GFTMVQ
Trigger: CTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGG...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CCCCTCTTTGACGCTGCTTCCACGGGCCCGATTACAGGGTGTGATCCCAAAAGCCCCAGGGCTCTGGGTTaGGGCTTCACTATGGTACAG +
Preference number: 5 (lower is better)
Translates to: PLFDAASTGPITGCDPKSPRALG*GFTMVQ
Trigger: CTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGG...GCTTTTGGGATCACACCCTGTAATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGTCATCCAATCTCCTTaGTCCCTCGGTTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRVIQSP*SLGCSV
Trigger: CACAGAACAACCGAGGGACAAAGGAGATTGGATGAC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTGTGCAGGCCCCACAGTaGCAGGGGCTGTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLVQAPQ*QGLFRA
Trigger: GGCCCGGAACAGCCCCTGCAACTGTGGGGCCTGCAC...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp AGGGGCTGTTCCGGGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGCACATAATTCATGGTTaGAGACCACAGGGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RGCSGPALPSHPISFVPRHIIHG*RPQGLR
Trigger: GCGGAGCCCCTGTGGTCTCAAACCATGAATTATGTG...CCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677752.1
CDS-3UTR CAA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTCTCTTTTGCTGACCTaGGTGGACTCTGGGAATCCG +
Preference number: 5 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNSLLLT*VDSGNP
Trigger: CGGATTCCCAGAGTCCACCAAGGTCAGCAAAAGAGA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGGCTCTGCCACAGATGTaGGGTCGCTCATCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLALPQM*GRSSVY
Trigger: GTACACAGATGAGCGACCCAACATCTGTGGCAGAGC...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGTCCGCTAAGGCTGCGTaGGGAAGGTGGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: QPPICISEASLKAELLGASAKAA*GRWSAS
Trigger: AGATGCTGACCACCTTCCCAACGCAGCCTTAGCGGA...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCACTTTAGCTGCCGGTTaGGATTCTGAGGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLTLAAG*DSEGAS
Trigger: GGAGGCGCCCTCAGAATCCAAACCGGCAGCTAAAGT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGAGCTCTTCTGGAATACTaGCAAGCTAAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRALLEY*QAKDHG
Trigger: CCCATGATCCTTAGCTTGCAAGTATTCCAGAAGAGC...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGGACAGAGGGACCAGCTACCCTCAACACAGGGCCAGGAGAGCCGGGTCCTAGATCAGATTTTCCCTCCTaGGATTCTGGCAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GTEGPATLNTGPGEPGPRSDFPS*DSGSCL
Trigger: CAAACAGCTGCCAGAATCCAAGGAGGGAAAATCTGA...TCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAGGGTAGCTGGTCCCTCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTGGCAAGATTGTGCCCTaGTCATTGACCCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCGKIVP*SLTQCR
Trigger: CCTGCACTGGGTCAATGACAAGGGCACAATCTTGCC...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGCTCCATAGGAGCTCCAAGACCCCTCTTTGACGCTGCTTCCACGGGCCCGATTAAGCTGGGGGAAGCTTaGCATGGGAGAAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: CSIGAPRPLFDAASTGPIKLGEA*HGRRLM
Trigger: CATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCTT...AATCGGGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAGCTCCTATGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp ACTCTGGGAATCCGCCCCACGTCCACTCCATGTGAGACTCTGATCTaGGCAGGCTCTCCGCAGGTTTCACCTCCAGCTCTGAATCACTCT +
Preference number: 5 (lower is better)
Translates to: TLGIRPTSTPCETLI*AGSPQVSPPALNHS
Trigger: AGAGTGATTCAGAGCTGGAGGTGAAACCTGCGGAGAGCCTGCTCAGATCAGAGTCTCACATGGAGTGGACGTGGGGCGGATTCCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGGCTCTGCCACAGATGTaGGGTCGCTCATCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: QPPICISEASLKAELLGAALPQM*GRSSVY
Trigger: GTACACAGATGAGCGACCCAACATCTGTGGCAGAGC...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTTCCGCTAAGGCTGCGTaGGGAAGGTGGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTSAKAA*GRWSAS
Trigger: AGATGCTGACCACCTTCCCAACGCAGCCTTAGCGGA...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCAAGCTGGGGGAAGCTTaGCATGGGAGAAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLKLGEA*HGRRLM
Trigger: CATGAGCCTTCTCCCATGCAAAGCTTCCCCCAGCTT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTTATTCTTTAAAGGGTaGGCCTGCACCTGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPLFFKG*ACTCSA
Trigger: GGCACTGCAGGTGCAGGCCAACCCTTTAAAGAATAA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 90 bp CTGAGTACTCTCAAGAGGAGGTTCGAGAAGCTCTGCCACAGATGTTaGGTCGCTCATCTGTGTACCCAGGGCTCTGGGTTTGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LSTLKRRFEKLCHRC*VAHLCTQGSGFGLH
Trigger: GTGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTGTGGCAGAGCTTCTCGAACCTCCTCTTGAGAGTACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACTCAGATCGTTCTCTTTaGCTGACCTTGGTGGACTCT +
Preference number: 5 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNSDRSL*LTLVDS
Trigger: AGAGTCCACCAAGGTCAGCAAAAGAGAACGATCTGA...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCACAGCGACAGGTGCCTaGATACTGGGTTGTAATACT +
Preference number: 5 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPTATGA*ILGCNT
Trigger: AGTATTACAACCCAGTATCAAGGCACCTGTCGCTGT...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTATGGTGGGTCCAGTCTTaGCCCAGCTGTGGGAGAATC +
Preference number: 5 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLWWVQS*PSCGRI
Trigger: GATTCTCCCACAGCTGGGCAAAGACTGGACCCACCA...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAGCCGTCACCCGTCACTGAAGATAGCGCGAGGGTGATGCTTCAACTCACCATCTGGAATGGTAGAGCTTaGCTATACCCTGGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: EPSPVTEDSARVMLQLTIWNGRA*LYPGGS
Trigger: GGACCCACCAGGGTATAGCAAAGCTCTACCATTCCA...GATGGTGAGTTGAAGCATCACCCTCGCGCTATCTTCAGTGACGGGTGACGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCAGGGGCATGAAGAGTaGGCCACGAGACCACCCCGA +
Preference number: 5 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIQGHEE*ATRPPR
Trigger: TCGGGGTGGTCTCGTGGCCAACTCTTCATGCCCCTG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAGACCACCCCGAGCGCCAAGCCTGTATCTGCAGATCCCTCTCTGCTCAGGAACCACCATCCTAAGGGTTaGTGTACAAACACACTCGAG +
Preference number: 5 (lower is better)
Translates to: ETTPSAKPVSADPSLLRNHHPKG*CTNTLE
Trigger: CTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTG...GTTCCTGAGCAGAGAGGGATCTGCAGATACAGGCTTGGCGCTCGGGGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp GAGGCAGAGGTTGCCTCCTACACTGCACTCCAGACTGGGTGGCAGTaGGACCAAGATACCAGGAGGGGACTTGTCATGGTAAACATCTTG +
Preference number: 5 (lower is better)
Translates to: EAEVASYTALQTGWQ*DQDTRRGLVMVNIL
Trigger: CAAGATGTTTACCATGACAAGTCCCCTCCTGGTATCTTGGTCTCACTGCCACCCAGTCTGGAGTGCAGTGTAGGAGGCAACCTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581568.1
CDS CCA 90 bp GCTCTGCCACAGATGTTGGGTCGCTCATCTGTGTACCCAGGGCTCTaGGTTTGGGCTTCACTATGGTACAGACAGTGTCTTCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: ALPQMLGRSSVYPGL*VWASLWYRQCLPWK
Trigger: CTTCCATGGAAGACACTGTCTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTGTGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGGCTGCCTGGGCCCCCTaGTCATCATCGGAGCTCACG +
Preference number: 5 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEAAWAP*SSSELT
Trigger: CGTGAGCTCCGATGATGACAAGGGGGCCCAGGCAGC...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGCTTTCAAGGAAGCATTaGAAGATCCTCGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLLSRKH*KILVLP
Trigger: AGGCAGCACGAGGATCTTCAAATGCTTCCTTGAAAG...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCATCAGGTCCCTGGTGTaGGCTTCTTTTGTGAACACC +
Preference number: 5 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLIRSLV*ASFVNT
Trigger: GGTGTTCACAAAAGAAGCCAACACCAGGGACCTGAT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGCACCGGCCGGCTCCTaGGAGCTGGATGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPAPAGS*ELDGRS
Trigger: TGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGTGC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 90 bp CCCCTTGTCATCATCGGAGCTCACGCCTACATCACATGTGTCTTCTaGAGCAGCAGATGCGGCCTGCTCTTCCTTCTTACTGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PLVIIGAHAYITCVF*SSRCGLLFLLTVLF
Trigger: AAACAGGACAGTAAGAAGGAAGAGCAGGCCGCATCTGCTGCTGCAGAAGACACATGTGATGTAGGCGTGAGCTCCGATGATGACAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCACTTCACTGATGAGGTaGTCCTCACTGGGAATTACC +
Preference number: 5 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLTSLMR*SSLGIT
Trigger: GGTAATTCCCAGTGAGGACAACCTCATCAGTGAAGT...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp ACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCATGTGTGATTTCTTTGGCATCTaGTCTTTCACCCAGGACTCA +
Preference number: 5 (lower is better)
Translates to: TGPGEPGPRLNPLRRPMCDFFGI*SFTQDS
Trigger: TGAGTCCTGGGTGAAAGACAAGATGCCAAAGAAATC...ACACATGGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGAGCGACCAGATTTCTTaGGCATCTTGTCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: QPPICISEASLKAELLGASDQIS*ASCLSP
Trigger: GGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGCT...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp AGCAAGCAGAGGGATTCAGCGCTCTTCCCAGGACCCCACTCAACCGCCTATCTGGATTCTGGCAGCTGTTaGGTCATGCTTTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: SKQRDSALFPGPHSTAYLDSGSC*VMLSLF
Trigger: AAAGAGAGAAAGCATGACCAAACAGCTGCCAGAATC...CAGATAGGCGGTTGAGTGGGGTCCTGGGAAGAGCGCTGAATCCCTCTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAACTTCTTATATGAAGTaGTGCTGCCGTGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKTSYMK*CCRGSG
Trigger: CCCTGAGCCACGGCAGCACAACTTCATATAAGAAGT...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTGTCATCCAATCTCCTTaGTCCCTCGGTTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTVIQSP*SLGCSV
Trigger: CACAGAACAACCGAGGGACAAAGGAGATTGGATGAC...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTTTATTCTTTAAAGGGTaGGCCTGCACCTGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVLFFKG*ACTCSA
Trigger: GGCACTGCAGGTGCAGGCCAACCCTTTAAAGAATAA...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 90 bp GGTCGCTCATCTGTGTACCCAGGGCTCTGGGTTTGGGCTTCACTATaGTACAGACAGTGTCTTCCATGGAAGCATCCTTCTCAACTTCAC +
Preference number: 5 (lower is better)
Translates to: GRSSVYPGLWVWASL*YRQCLPWKHPSQLH
Trigger: GTGAAGTTGAGAAGGATGCTTCCATGGAAGACACTGTCTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAACTTCACTGATGAGGTaGTCCTCACTGGGAATTACC +
Preference number: 5 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKTSLMR*SSLGIT
Trigger: GGTAATTCCCAGTGAGGACAACCTCATCAGTGAAGT...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TTCCCAGGACCCCACTCAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCGATTTCTTTGGCATCTaGTCTTTCACCCAGGACTCA +
Preference number: 5 (lower is better)
Translates to: FPGPHSTAYLHFGGLPKSDFFGI*SFTQDS
Trigger: TGAGTCCTGGGTGAAAGACAAGATGCCAAAGAAATC...GCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTGAGTGGGGTCCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCCCCAAAGCATCCGACTaGGTTATTGTCCCATCAATA +
Preference number: 5 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLPKASD*VIVPSI
Trigger: TATTGATGGGACAATAACCAAGTCGGATGCTTTGGG...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGCCAGCGCTTCCCAGTCATCCAATCTCCTTTGTCCCTCGGTTGTTCTGTGACTAGGCATAGACATCATTaGGACGGTTTCCAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GQRFPVIQSPLSLGCSVTRHRHH*DGFQRQ
Trigger: CTGCCTTTGGAAACCGTCCAAATGATGTCTATGCCT...AGTCACAGAACAACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTCAACACAGGGCCAGGAGAGCCGGGTCCTAGACTGAACCCTCTAAGAAGGCCCTGTATTAATTCACCCTaGGGGTTCACGGTGAATATT +
Preference number: 5 (lower is better)
Translates to: LNTGPGEPGPRLNPLRRPCINSP*GFTVNI
Trigger: AATATTCACCGTGAACCCCAAGGGTGAATTAATACA...GGGCCTTCTTAGAGGGTTCAGTCTAGGACCCGGCTCTCCTGGCCCTGTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGTTCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCACCATCCTAAGGGTTaGTGTACAAACACACTCGAG +
Preference number: 5 (lower is better)
Translates to: CSRQWRPRPGVGSGLLTVHHPKG*CTNTLE
Trigger: CTCGAGTGTGTTTGTACACAAACCCTTAGGATGGTG...AACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTACTTTCAAGGAAGCATTaGAAGATCCTCGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLLSRKH*KILVLP
Trigger: AGGCAGCACGAGGATCTTCAAATGCTTCCTTGAAAG...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAGCTCTTCTGGAATACTaGCAAGCTAAGGATCATGGG +
Preference number: 5 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLALLEY*QAKDHG
Trigger: CCCATGATCCTTAGCTTGCAAGTATTCCAGAAGAGC...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TGCAATGGAAGGAGGCCCCAGCTCACAGCAGGAAACATGTGTGCGACCCACAAAGATTCTGGCAGCTGTTaGGTCATGCTTTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: CNGRRPQLTAGNMCATHKDSGSC*VMLSLF
Trigger: AAAGAGAGAAAGCATGACCAAACAGCTGCCAGAATC...TTTGTGGGTCGCACACATGTTTCCTGCTGTGAGCTGGGGCCTCCTTCCATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAACAGCGACAGGTGCCTaGATACTGGGTTGTAATACT +
Preference number: 5 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLTATGA*ILGCNT
Trigger: AGTATTACAACCCAGTATCAAGGCACCTGTCGCTGT...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp TTTGGATCTCAGGACTCCCAGCTTTCCAAACCGAACGTGAAAAGGTaGACACTGATAGCTGCCATCCTGCTGCTGTACCACGATGACATC +
Preference number: 5 (lower is better)
Translates to: FGSQDSQLSKPNVKR*TLIAAILLLYHDDI
Trigger: GATGTCATCGTGGTACAGCAGCAGGATGGCAGCTATCAGTGTTCACCTTTTCACGTTCGGTTTGGAAAGCTGGGAGTCCTGAGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261596.8
ENST00000584915.1
ENST00000677752.1
CDS-3UTR CAA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAATGGAATGGTAGAGCTTaGCTATACCCTGGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQWNGRA*LYPGGS
Trigger: GGACCCACCAGGGTATAGCAAAGCTCTACCATTCCA...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGGGCAAGATTGTGCCCTaGTCATTGACCCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEGKIVP*SLTQCR
Trigger: CCTGCACTGGGTCAATGACAAGGGCACAATCTTGCC...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 90 bp CTCACGCCTACATCACATGTGTCTTCTGCAGCAGCAGATGCGGCCTaGTCTTCCTTCTTACTGTCCTGTTTGTATTTCTTTCTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: LTPTSHVSSAAADAA*SSFLLSCLYFFLLR
Trigger: ACGAAGGAGAAAGAAATACAAACAGGACAGTAAGAAGGAAGAGCAGGCCGCATCTGCTGCTGCAGAAGACACATGTGATGTAGGCGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCAGGGAAGAGCCGATGTaGGACGGCTATCACACGTGG +
Preference number: 5 (lower is better)
Translates to: MAEISQGLSTLQSGKITTREEPM*DGYHTW
Trigger: CCACGTGTGATAGCCGTCCAACATCGGCTCTTCCCT...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS-3UTR CAA 90 bp CAACCGCCTATCTGCATTTCGGAGGCCTCCCTAAAAGCAGAGTTGTTGGGGGCGTTCTTACTGTCCTGTTaGTATTTCTTTCTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: QPPICISEASLKAELLGAFLLSC*YFFLLR
Trigger: ACGAAGGAGAAAGAAATACAAACAGGACAGTAAGAA...CGCCCCCAACAACTCTGCTTTTAGGGAGGCCTCCGAAATGCAGATAGGCGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp TCTCGCCAATGGAGACCAAGACCTGGGGTTGGTTCTGGGCTCCTGACAGTTCTCTTCTTACTGTCCTGTTaGTATTTCTTTCTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: SRQWRPRPGVGSGLLTVLFLLSC*YFFLLR
Trigger: ACGAAGGAGAAAGAAATACAAACAGGACAGTAAGAA...GAGAACTGTCAGGAGCCCAGAACCAACCCCAGGTCTTGGTCTCCATTGGCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTTCAGATTTTCCCTCCTaGGATTCTGGCAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LMAHLSLVPSLQTRCELISDFPS*DSGSCL
Trigger: CAAACAGCTGCCAGAATCCAAGGAGGGAAAATCTGA...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTGGTGGGTCCAGTCTTaGCCCAGCTGTGGGAGAATC +
Preference number: 5 (lower is better)
Translates to: MAEISQGLSTLQSGKITTWWVQS*PSCGRI
Trigger: GATTCTCCCACAGCTGGGCAAAGACTGGACCCACCA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTAGGCATAGACATCATTaGGACGGTTTCCAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLRHRHH*DGFQRQ
Trigger: CTGCCTTTGGAAACCGTCCAAATGATGTCTATGCCT...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTCTCCTGACAGTTCTCTaGATGTTAAGAGTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LMAHLSLVPSLQTRCELILLTVL*MLRVQL
Trigger: GAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAG...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CAGATGAGAGGAGGATGCTCTGTGGGGATCTTTCCCCAAAGAGGGCCAGGTTTAGGTTGTTCTGTGACTTaGAGCAGCTTTCATTTTAGG +
Preference number: 5 (lower is better)
Translates to: QMRGGCSVGIFPQRGPGLGCSVT*SSFHFR
Trigger: CCTAAAATGAAAGCTGCTCAAAGTCACAGAACAACC...TAAACCTGGCCCTCTTTGGGGAAAGATCCCCACAGAGCATCCTCCTCTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp AAGGCTGCGTTGGGAAGGTGGTCAGCATCTAACATAGATGAAATCTaGGTACTCTCAAGAGGAGGTTCGAGAAGCTCTGCCACAGATGTT +
Preference number: 5 (lower is better)
Translates to: KAALGRWSASNIDEI*VLSRGGSRSSATDV
Trigger: AACATCTGTGGCAGAGCTTCTCGAACCTCCTCTTGAGAGTACTCAGATTTCATCTATGTTAGATGCTGACCACCTTCCCAACGCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGATCAGGTCCCTGGTGTaGGCTTCTTTTGTGAACACC +
Preference number: 5 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEIRSLV*ASFVNT
Trigger: GGTGTTCACAAAAGAAGCCAACACCAGGGACCTGAT...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGAAGCGACCAGATTTCTTaGGCATCTTGTCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRSDQIS*ASCLSP
Trigger: GGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGCT...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GGACACACAGATGGCATCTATGAAATAAGGTGGCTGCATGGCTGCTGTACTAGACCCAAAGCATCCGACTaGGTTATTGTCCCATCAATA +
Preference number: 5 (lower is better)
Translates to: GHTDGIYEIRWLHGCCTRPKASD*VIVPSI
Trigger: TATTGATGGGACAATAACCAAGTCGGATGCTTTGGG...TCTAGTACAGCAGCCATGCAGCCACCTTATTTCATAGATGCCATCTGTGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTTCTTCTGGTGAGGACTAAGAAATTAAGGGCTCGTGGAGTTGTCACAGATGAGGTCTGGAACTCCAACTaGTGTGTAGGCATAGACATC +
Preference number: 5 (lower is better)
Translates to: VLLVRTKKLRARGVVTDEVWNSN*CVGIDI
Trigger: GATGTCTATGCCTACACACAAGTTGGAGTTCCAGAC...CTCATCTGTGACAACTCCACGAGCCCTTAATTTCTTAGTCCTCACCAGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGCTCCAAGACCCCTCTTaGACGCTGCTTCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMLQDPS*TLLPRA
Trigger: GGCCCGTGGAAGCAGCGTCAAAGAGGGGTCTTGGAG...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGTCTGGAACTCCAACTaGTGTGTAGGCATAGACATC +
Preference number: 5 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPVWNSN*CVGIDI
Trigger: GATGTCTATGCCTACACACAAGTTGGAGTTCCAGAC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTGATCCCAAAAGCCAAAGTCACACACTGCTGGCCAGTGCCTTTAAGCAAGCTTTGTATTAATTCACCCTaGGGGTTCACGGTGAATATT +
Preference number: 5 (lower is better)
Translates to: VIPKAKVTHCWPVPLSKLCINSP*GFTVNI
Trigger: AATATTCACCGTGAACCCCAAGGGTGAATTAATACA...AAGCTTGCTTAAAGGCACTGGCCAGCAGTGTGTGACTTTGGCTTTTGGGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp GTAAAAATTGTCTCTGTTTCCAAGACGTGTGAGATGTCTGAACTCTaGGATGGTGTTTCATCTCCACCCGATTTCACCAAAGGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: VKIVSVSKTCEMSEL*DGVSSPPDFTKGVS
Trigger: TGACACCCCTTTGGTGAAATCGGGTGGAGATGAAACACCATCTCAGAGTTCAGACATCTCACACGTCTTGGAAACAGAGACAATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCTCAGATCGTTCTCTTTaGCTGACCTTGGTGGACTCT +
Preference number: 5 (lower is better)
Translates to: MAEISQGLSTLQSGKITTSDRSL*LTLVDS
Trigger: AGAGTCCACCAAGGTCAGCAAAAGAGAACGATCTGA...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CTTATGGCACACCTTTCCCTGGTGCCATCTCTTCAGACACGATGTGAGCTCATTATTACAAGGTTAGGATaGTCTATAAGTCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: LMAHLSLVPSLQTRCELIITRLG*SISPGF
Trigger: AAACCCTGGACTTATAGACAATCCTAACCTTGTAAT...AATGAGCTCACATCGTGTCTGAAGAGATGGCACCAGGGAAAGGTGTGCCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp ATGGCTGAAATCAGTCAGGGACTTTCAACTCTCCAATCTGGAAAAATAACCACCCTCCTGACAGTTCTCTaGATGTTAAGAGTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: MAEISQGLSTLQSGKITTLLTVL*MLRVQL
Trigger: GAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAG...GGTGGTTATTTTTCCAGATTGGAGAGTTGAAAGTCCCTGACTGATTTCAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp GATGAGGTTGTCCTCACTGGGAATTACCCGAAAATGAGTATTTTCTaGTGGTGTAATTGTAGCTGTCCTAGGATGATGGTCAGATCGTTC +
Preference number: 5 (lower is better)
Translates to: DEVVLTGNYPKMSIF*WCNCSCPRMMVRSF
Trigger: GAACGATCTGACCATCATCCTAGGACAGCTACAATTACACCATCAGAAAATACTCATTTTCGGGTAATTCCCAGTGAGGACAACCTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCTCCACTGCACTGCCGTaGATTTCTATATCAATCACT +
Preference number: 5 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPSTALP*ISISIT
Trigger: AGTGATTGATATAGAAATCAACGGCAGTGCAGTGGA...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GTTGGTTCTGGGCTCCTGACAGTTCTCTTGATGTTAAGAGTGCAGCTCTGTCAAATTACAAGGTTAGGATaGTCTATAAGTCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: VGSGLLTVLLMLRVQLCQITRLG*SISPGF
Trigger: AAACCCTGGACTTATAGACAATCCTAACCTTGTAAT...TTGACAGAGCTGCACTCTTAACATCAAGAGAACTGTCAGGAGCCCAGAACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp GAATCACAGAATTTTAGAAATCCTGTCCCAAGGCAAGATGCTTTCCAAAGGCCCGGTTGTTCTGTGACTTaGAGCAGCTTTCATTTTAGG +
Preference number: 5 (lower is better)
Translates to: ESQNFRNPVPRQDAFQRPGCSVT*SSFHFR
Trigger: CCTAAAATGAAAGCTGCTCAAAGTCACAGAACAACC...GGGCCTTTGGAAAGCATCTTGCCTTGGGACAGGATTTCTAAAATTCTGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGTCTCTTTTGCTGACCTaGGTGGACTCTGGGAATCCG +
Preference number: 5 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMSLLLT*VDSGNP
Trigger: CGGATTCCCAGAGTCCACCAAGGTCAGCAAAAGAGA...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 90 bp TTCCTTTGGTTCTTTCTTGTATTAATTCACCCTTGGGGTTCACGGTaGATATTCTACAGTCTGGAACTCCAACTTGTGTGTAGGCATAGA +
Preference number: 5 (lower is better)
Translates to: FLWFFLVLIHPWGSR*IFYSLELQLVCRHR
Trigger: TCTATGCCTACACACAAGTTGGAGTTCCAGACTGTAGAATATTCACCGTGAACCCCAAGGGTGAATTAATACAAGAAAGAACCAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGACTTCTTATATGAAGTaGTGCTGCCGTGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMTSYMK*CCRGSG
Trigger: CCCTGAGCCACGGCAGCACAACTTCATATAAGAAGT...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS-3UTR CAA 90 bp CATTCATCTTGCAACAATTGCTTTACTGTAACTAAGAGTACTGTACTGATGATGTCCACTGCACTGCCGTaGATTTCTATATCAATCACT +
Preference number: 5 (lower is better)
Translates to: HSSCNNCFTVTKSTVLMMSTALP*ISISIT
Trigger: AGTGATTGATATAGAAATCAACGGCAGTGCAGTGGA...CATCATCAGTACAGTACTCTTAGTTACAGTAAAGCAATTGTTGCAAGATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp CTGCCTTCCCTTGCTGTGGGGAGGGGGACCAAGCCCTaGCCACCCACTGAGGTGCCGCCTCAAGACAGGTCA +
Preference number: 6 (lower is better)
Translates to: LPSLAVGRGTKP*PPTEVPPQDRS
Trigger: TGACCTGTCTTGAGGCGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCTCCCCACAGCAAGGGAAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp CACCTGTCTCCATCCCCTGCACTGTGTGGCCGGCTCTaGCGCTTCTCCCCCGCTTCAGCATCACCTGCCACT +
Preference number: 6 (lower is better)
Translates to: HLSPSPALCGRL*RFSPASASPAT
Trigger: AGTGGCAGGTGATGCTGAAGCGGGGGAGAAGCGGCAGAGCCGGCCACACAGTGCAGGGGATGGAGACAGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS GCA 72 bp TGGGGAGGGGGACCAAGCCCTGCCCACCCACTGAGGTaGCGCCTCAAGACAGGTCATCCAGGTCCACTTCAG +
Preference number: 6 (lower is better)
Translates to: WGGGPSPAHPLR*RLKTGHPGPLQ
Trigger: CTGAAGTGGACCTGGATGACCTGTCTTGAGGCGGCACCTCAGTGGGTGGGCAGGGCTTGGTCCCCCTCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 72 bp GGTGCCGCTATCTGCAGCTGCGCTTCCCACGGACTGTaGGGACTGGGAGCCAGAGAGTGTGTCAGACTCGGG +
Preference number: 6 (lower is better)
Translates to: GAAICSCASHGL*GLGARECVRLG
Trigger: CCCGAGTCTGACACACTCTCTGGCTCCCAGTCCCCACAGTCCGTGGGAAGCGCAGCTGCAGATAGCGGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 72 bp CACCGGCCGGCTCCTTGGAGCTGGATGGCAGGTCACTaGCTGGCGGTGCCTCAGATTTTCCCTCCTTGGATT +
Preference number: 6 (lower is better)
Translates to: HRPAPWSWMAGH*LAVPQIFPPWI
Trigger: AATCCAAGGAGGGAAAATCTGAGGCACCGCCAGCCAGTGACCTGCCATCCAGCTCCAAGGAGCCGGCCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp CAGGCAAGTCCATGGCAGAATCTGAGAGGCACTCGGTaGCGCTATCTGCAGCTGCGCTTCCCACGGACTGTG +
Preference number: 6 (lower is better)
Translates to: QASPWQNLRGTR*RYLQLRFPRTV
Trigger: CACAGTCCGTGGGAAGCGCAGCTGCAGATAGCGGCACCGAGTGCCTCTCAGATTCTGCCATGGACTTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp AGGCGAAAGGACTGCTTGAGCCTGGGAGGCAGAGGTTaGCTCCTACACTGCACTCCAGACTGGGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RRKDCLSLGGRG*LLHCTPDWVAV
Trigger: CACTGCCACCCAGTCTGGAGTGCAGTGTAGGAGGCAACCTCTGCCTCCCAGGCTCAAGCAGTCCTTTCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581568.1
CDS CAA 72 bp GAGGCGAAAGGACTGCTTGAGCCTGGGAGGCAGAGGTaGCCTCCTACACTGCACTCCAGACTGGGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: EAKGLLEPGRQR*PPTLHSRLGGS
Trigger: ACTGCCACCCAGTCTGGAGTGCAGTGTAGGAGGCAACCTCTGCCTCCCAGGCTCAAGCAGTCCTTTCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581568.1
CDS TCA 72 bp ATCCGCCCCACGTCCACTCCATGTGAGACTCTGATCTaGGCAGGCTCTCCGCAGGTTTCACCTCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: IRPTSTPCETLI*AGSPQVSPPAL
Trigger: CAGAGCTGGAGGTGAAACCTGCGGAGAGCCTGCTCAGATCAGAGTCTCACATGGAGTGGACGTGGGGCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 72 bp GGAGAGGGTAACGTCAGGCAAGTCCATGGCAGAATCTaGGAGGCACTCGGTGCCGCTATCTGCAGCTGCGCT +
Preference number: 6 (lower is better)
Translates to: GEGNVRQVHGRI*EALGAAICSCA
Trigger: AGCGCAGCTGCAGATAGCGGCACCGAGTGCCTCTCAGATTCTGCCATGGACTTGCCTGACGTTACCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp CTCCTTGGAGCTGGATGGCAGGTCACTGGCTGGCGGTaGCTCAGATTTTCCCTCCTTGGATTCTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LLGAGWQVTGWR*LRFSLLGFWQL
Trigger: CAGCTGCCAGAATCCAAGGAGGGAAAATCTGAGGCACCGCCAGCCAGTGACCTGCCATCCAGCTCCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 72 bp GGAGGCAGAGGTTGCCTCCTACACTGCACTCCAGACTaGGTGGCAGTGAGACCAAGATACCAGGAGGGGACT +
Preference number: 6 (lower is better)
Translates to: GGRGCLLHCTPD*VAVRPRYQEGT
Trigger: AGTCCCCTCCTGGTATCTTGGTCTCACTGCCACCCAGTCTGGAGTGCAGTGTAGGAGGCAACCTCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581568.1
CDS TCA 72 bp GATGGGGTCCACTGTGATGGATTCTTCGAGCTCCTGTaGTCCCTCGTCACTCGAGGAGTCATTCTCGGCCGG +
Preference number: 6 (lower is better)
Translates to: DGVHCDGFFELL*SLVTRGVILGR
Trigger: CCGGCCGAGAATGACTCCTCGAGTGACGAGGGATCACAGGAGCTCGAAGAATCCATCACAGTGGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp GACTGGGAGCCAGAGAGTGTGTCAGACTCGGGCCACTaGCTGGAACCGGGCTCCGATTCACTTTTAGGGAAA +
Preference number: 6 (lower is better)
Translates to: DWEPESVSDSGH*LEPGSDSLLGK
Trigger: TTTCCCTAAAAGTGAATCGGAGCCCGGTTCCAGGCAGTGGCCCGAGTCTGACACACTCTCTGGCTCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS GCA 72 bp TGCTTGAGCCTGGGAGGCAGAGGTTGCCTCCTACACTaGACTCCAGACTGGGTGGCAGTGAGACCAAGATAC +
Preference number: 6 (lower is better)
Translates to: CLSLGGRGCLLH*TPDWVAVRPRY
Trigger: GTATCTTGGTCTCACTGCCACCCAGTCTGGAGTGCAGTGTAGGAGGCAACCTCTGCCTCCCAGGCTCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581568.1
CDS TCA 72 bp TCTGAGCAGGCTCTCCGCAGGTTTCACCTCCAGCTCTaGATCACTCTTAGGACACGCTGTCTGGGGATAGGT +
Preference number: 6 (lower is better)
Translates to: SEQALRRFHLQL*ITLRTRCLGIG
Trigger: ACCTATCCCCAGACAGCGTGTCCTAAGAGTGATTCAGAGCTGGAGGTGAAACCTGCGGAGAGCCTGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 72 bp ACTCCGGGCAGGGAAAAGCGGAATTCTGCTCCTTACTaGGAAGGGGGAACACATGCTCCACGAGCTCACTCA +
Preference number: 6 (lower is better)
Translates to: TPGREKRNSAPY*EGGTHAPRAHS
Trigger: TGAGTGAGCTCGTGGAGCATGTGTTCCCCCTTCTCAGTAAGGAGCAGAATTCCGCTTTTCCCTGCCCGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 72 bp CTCAAGAGGAGGTTCGAGAAGCTCTGCCACAGATGTTaGGTCGCTCATCTGTGTACCCAGGGCTCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: LKRRFEKLCHRC*VAHLCTQGSGF
Trigger: AAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTGTGGCAGAGCTTCTCGAACCTCCTCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 72 bp GAAGCATTTGAAGATCCTCGTGCTGCCTGGGCCCCCTaGTCATCATCGGAGCTCACGCCTACATCACATGTG +
Preference number: 6 (lower is better)
Translates to: EAFEDPRAAWAP*SSSELTPTSHV
Trigger: CACATGTGATGTAGGCGTGAGCTCCGATGATGACAAGGGGGCCCAGGCAGCACGAGGATCTTCAAATGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 72 bp TCTCAAGAGGAGGTTCGAGAAGCTCTGCCACAGATGTaGGGTCGCTCATCTGTGTACCCAGGGCTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: SQEEVREALPQM*GRSSVYPGLWV
Trigger: AACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTGTGGCAGAGCTTCTCGAACCTCCTCTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 90 bp GCCACAGATGTTGGGTCGCTCATCTGTGTACCCAGGGCTCTGGGTTaGGGCTTCACTATGGTACAGACAGTGTCTTCCATGGAAGCATCC +
Preference number: 6 (lower is better)
Translates to: ATDVGSLICVPRALG*GFTMVQTVSSMEAS
Trigger: GGATGCTTCCATGGAAGACACTGTCTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 90 bp TCTGAGTACTCTCAAGAGGAGGTTCGAGAAGCTCTGCCACAGATGTaGGGTCGCTCATCTGTGTACCCAGGGCTCTGGGTTTGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SEYSQEEVREALPQM*GRSSVYPGLWVWAS
Trigger: TGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTGTGGCAGAGCTTCTCGAACCTCCTCTTGAGAGTACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 72 bp GTTGGGTCGCTCATCTGTGTACCCAGGGCTCTGGGTTaGGGCTTCACTATGGTACAGACAGTGTCTTCCATG +
Preference number: 6 (lower is better)
Translates to: VGSLICVPRALG*GFTMVQTVSSM
Trigger: CATGGAAGACACTGTCTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 72 bp CAGGACTCCCAGCTTTCCAAACCGAACGTGAAAAGGTaGACACTGATAGCTGCCATCCTGCTGCTGTACCAC +
Preference number: 6 (lower is better)
Translates to: QDSQLSKPNVKR*TLIAAILLLYH
Trigger: GTGGTACAGCAGCAGGATGGCAGCTATCAGTGTTCACCTTTTCACGTTCGGTTTGGAAAGCTGGGAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261596.8
ENST00000584915.1
ENST00000677752.1
CDS CCA 72 bp TGGAGGGAAGAGCCGATGTTGGACGGCTATCACACGTaGCTTCACACTGTTCTTTTTCTTCTCTGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: WREEPMLDGYHT*LHTVLFLLWLG
Trigger: ACCCAGCCAGAGAAGAAAAAGAACAGTGTGAAGCCACGTGTGATAGCCGTCCAACATCGGCTCTTCCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS CCA 72 bp CAGATGTTGGGTCGCTCATCTGTGTACCCAGGGCTCTaGGTTTGGGCTTCACTATGGTACAGACAGTGTCTT +
Preference number: 6 (lower is better)
Translates to: QMLGRSSVYPGL*VWASLWYRQCL
Trigger: AAGACACTGTCTGTACCATAGTGAAGCCCAAACCCAGAGCCCTGGGTACACAGATGAGCGACCCAACATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 72 bp CGCCAAAACCACCAGCGACCAGATTTCTTTGGCATCTaGTCTTTCACCCAGGACTCAACTGTGGCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: RQNHQRPDFFGI*SFTQDSTVALG
Trigger: GCCTAAGGCCACAGTTGAGTCCTGGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGCTGGTGGTTTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 90 bp TCTCTCTTTCGCCAAAACCACCAGCGACCAGATTTCTTTGGCATCTaGTCTTTCACCCAGGACTCAACTGTGGCCTTAGGCAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SLFRQNHQRPDFFGI*SFTQDSTVALGKLF
Trigger: GAAGAGCTTGCCTAAGGCCACAGTTGAGTCCTGGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGCTGGTGGTTTTGGCGAAAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 72 bp CTCTCTTTCGCCAAAACCACCAGCGACCAGATTTCTTaGGCATCTTGTCTTTCACCCAGGACTCAACTGTGG +
Preference number: 6 (lower is better)
Translates to: LSFAKTTSDQIS*ASCLSPRTQLW
Trigger: CCACAGTTGAGTCCTGGGTGAAAGACAAGATGCCAAAGAAATCTGGTCGCTGGTGGTTTTGGCGAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 72 bp GTCTCTGTTTCCAAGACGTGTGAGATGTCTGAACTCTaGGATGGTGTTTCATCTCCACCCGATTTCACCAAA +
Preference number: 6 (lower is better)
Translates to: VSVSKTCEMSEL*DGVSSPPDFTK
Trigger: TTTGGTGAAATCGGGTGGAGATGAAACACCATCTCAGAGTTCAGACATCTCACACGTCTTGGAAACAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 72 bp ATCAACTACAATGTAATTGGAGGGAAGAGCCGATGTTaGACGGCTATCACACGTGGCTTCACACTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: INYNVIGGKSRC*TAITRGFTLFF
Trigger: AAAGAACAGTGTGAAGCCACGTGTGATAGCCGTCCAACATCGGCTCTTCCCTCCAATTACATTGTAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS CCA 72 bp GTTGTAATACTAAACACAACATCATTTGGGCCATCGTaGAGCTTCAGTTTTGCGATCTGGTCTGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VVILNTTSFGPS*SFSFAIWSEER
Trigger: CCTCTCCTCAGACCAGATCGCAAAACTGAAGCTCCACGATGGCCCAAATGATGTTGTGTTTAGTATTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 72 bp CCACAGGTAAATGGTCCCTGCACAGCGACAGGTGCCTaGATACTGGGTTGTAATACTAAACACAACATCATT +
Preference number: 6 (lower is better)
Translates to: PQVNGPCTATGA*ILGCNTKHNII
Trigger: AATGATGTTGTGTTTAGTATTACAACCCAGTATCAAGGCACCTGTCGCTGTGCAGGGACCATTTACCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CAA 90 bp TTGAGACACAATCAACTACAATGTAATTGGAGGGAAGAGCCGATGTaGGACGGCTATCACACGTGGCTTCACACTGTTCTTTTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LRHNQLQCNWREEPM*DGYHTWLHTVLFLL
Trigger: GAGAAGAAAAAGAACAGTGTGAAGCCACGTGTGATAGCCGTCCAACATCGGCTCTTCCCTCCAATTACATTGTAGTTGATTGTGTCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS CCA 72 bp ATTCATGGTTTGAGACACAATCAACTACAATGTAATTaGAGGGAAGAGCCGATGTTGGACGGCTATCACACG +
Preference number: 6 (lower is better)
Translates to: IHGLRHNQLQCN*REEPMLDGYHT
Trigger: CGTGTGATAGCCGTCCAACATCGGCTCTTCCCTCCAATTACATTGTAGTTGATTGTGTCTCAAACCATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261596.8
CDS CCA 72 bp TTCACCCTTGGGGTTCACGGTGAATATTCTACAGTCTaGAACTCCAACTTGTGTGTAGGCATAGACATCATT +
Preference number: 6 (lower is better)
Translates to: FTLGVHGEYSTV*NSNLCVGIDII
Trigger: AATGATGTCTATGCCTACACACAAGTTGGAGTTCCAGACTGTAGAATATTCACCGTGAACCCCAAGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS CCA 72 bp TTGATACTGGGTTGTAATACTAAACACAACATCATTTaGGCCATCGTGGAGCTTCAGTTTTGCGATCTGGTC +
Preference number: 6 (lower is better)
Translates to: LILGCNTKHNII*AIVELQFCDLV
Trigger: GACCAGATCGCAAAACTGAAGCTCCACGATGGCCCAAATGATGTTGTGTTTAGTATTACAACCCAGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1
CDS TCA 72 bp CACCCAACTTCATGTGAAGATCCACTGCACTGCCGTTaGTTTCTATATCAATCACTTTCTCTTTGGATCTCA +
Preference number: 6 (lower is better)
Translates to: HPTSCEDPLHCR*FLYQSLSLWIS
Trigger: TGAGATCCAAAGAGAAAGTGATTGATATAGAAATCAACGGCAGTGCAGTGGATCTTCACATGAAGTTGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261596.8
ENST00000584915.1
ENST00000677752.1
CDS GCA 72 bp TACAAGGTTAGGATTGTCTATAAGTCCAGGGTTTTCTaGAAATTCGTGATAAGTAATGATATGCTCCATGAA +
Preference number: 6 (lower is better)
Translates to: YKVRIVYKSRVF*KFVISNDMLHE
Trigger: TTCATGGAGCATATCATTACTTATCACGAATTTGCAGAAAACCCTGGACTTATAGACAATCCTAACCTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261596.8
ENST00000677752.1