RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPGAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000123684

Ensembl transcript IDs: ENST00000366996.1, ENST00000366997.9, ENST00000488600.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTTCTGAAGTTAAGGGTGACCTGCTGGCTTGGTCACTTTTGCAGTaGCTGGACCTGCCTGTGGCCAAGCACATGTTCCATCACTGTAAC +
Preference number: 1 (lower is better)
Translates to: VSEVKGDLLAWSLLQ*LDLPVAKHMFHHCN
Trigger: GTTACAGTGATGGAACATGTGCTTGGCCACAGGCAGGTCCAGTCACTGCAAAAGTGACCAAGCCAGCAGGTCACCCTTAACTTCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 90 bp GTGGCTTGCTGTAGCAATGAGGAAAAGGTCTATCAGCTAGGACCGTaGATGCTGTATTTGACAGTGAGCAACTTCTCCCCCAGATGGTTG +
Preference number: 1 (lower is better)
Translates to: VACCSNEEKVYQLGP*MLYLTVSNFSPRWL
Trigger: CAACCATCTGGGGGAGAAGTTGCTCACTGTCAAATACAGCATGCACGGTCCTAGCTGATAGACCTTTTCCTCATTGCTACAGCAAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 90 bp TTAAGGGTGACCTGCTGGCTTGGTCACTTTTGCAGTGACTGGACCTaGCTGTGGCCAAGCACATGTTCCATCACTGTAACTCATCAATAC +
Preference number: 1 (lower is better)
Translates to: LRVTCWLGHFCSDWT*LWPSTCSITVTHQY
Trigger: GTATTGATGAGTTACAGTGATGGAACATGTGCTTGGCCACAGGCAGGTCCAGTCACTGCAAAAGTGACCAAGCCAGCAGGTCACCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 90 bp GCAACAGACTGGAGTTTGTTACTGCAACAGACTGGAGTTTGTTACTaGAAACGACAGGGAAAGAGTTCTTCACGAGGTGCCAACCAGCTC +
Preference number: 1 (lower is better)
Translates to: ATDWSLLLQQTGVCY*KRQGKSSSRGANQL
Trigger: GAGCTGGTTGGCACCTCGTGAAGAACTCTTTCCCTGTCGTTTGCAGTAACAAACTCCAGTCTGTTGCAGTAACAAACTCCAGTCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 90 bp GAAAGAGTTCTTCACGAGGTGCCAACCAGCTCCCCTCAAGTTTACTaGGTTGGTGGAAATGTGGGCGTTCTAGAGAACTGCCCTAATATA +
Preference number: 1 (lower is better)
Translates to: ERVLHEVPTSSPQVY*VGGNVGVLENCPNI
Trigger: TATATTAGGGCAGTTCTCTAGAACGCCCACATTTCCACCAACTCAGTAAACTTGAGGGGAGCTGGTTGGCACCTCGTGAAGAACTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 90 bp CACCCTCAGCTTATTCCCAGGGTCCAGTTCCTAATTGTTGGGGATTaGCGCAAAATGATTACAATAAAGCACCAACCAATGACTGCTCCA +
Preference number: 1 (lower is better)
Translates to: HPQLIPRVQFLIVGD*RKMITIKHQPMTAP
Trigger: TGGAGCAGTCATTGGTTGGTGCTTTATTGTAATCATTTTGCGCCAATCCCCAACAATTAGGAACTGGACCCTGGGAATAAGCTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 90 bp CACATGTTCCATCACTGTAACTCATCAATACCAAGATTCCAGCAATaGATTCTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCC +
Preference number: 1 (lower is better)
Translates to: HMFHHCNSSIPRFQQ*ILNLVCCGNLGSLA
Trigger: GGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAGAATCCATTGCTGGAATCTTGGTATTGATGAGTTACAGTGATGGAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 90 bp AGTTCAGCACCCTCAGCTTATTCCCAGGGTCCAGTTCCTAATTGTTaGGGATTGGCGCAAAATGATTACAATAAAGCACCAACCAATGAC +
Preference number: 1 (lower is better)
Translates to: SSAPSAYSQGPVPNC*GLAQNDYNKAPTND
Trigger: GTCATTGGTTGGTGCTTTATTGTAATCATTTTGCGCCAATCCCCAACAATTAGGAACTGGACCCTGGGAATAAGCTGAGGGTGCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 90 bp TCATTTGGTTTTTCAGTTTGCCTTCAGCATCCAACTGCCACAGTGTaGTTTAAGTACTTGCCTGCAGATATTAATGCCCAAATAGCTCTG +
Preference number: 1 (lower is better)
Translates to: SFGFSVCLQHPTATV*FKYLPADINAQIAL
Trigger: CAGAGCTATTTGGGCATTAATATCTGCAGGCAAGTACTTAAAGCACACTGTGGCAGTTGGATGCTGAAGGCAAACTGAAAAACCAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 90 bp CTACTCATCTCACTGATGCAGTACCAGCACTTTTGGAGAAGGGTGTaGTTCTCTTATGAGGTAAATTGTACAAACATCGCAACAAATTTC +
Preference number: 1 (lower is better)
Translates to: LLISLMQYQHFWRRV*FSYEVNCTNIATNF
Trigger: GAAATTTGTTGCGATGTTTGTACAATTTACCTCATAAGAGAACCACACCCTTCTCCAAAAGTGCTGGTACTGCATCAGTGAGATGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 90 bp CAAACAAAAACCCTACTCATCTCACTGATGCAGTACCAGCACTTTTaGAGAAGGGTGTGGTTCTCTTATGAGGTAAATTGTACAAACATC +
Preference number: 1 (lower is better)
Translates to: QTKTLLISLMQYQHF*RRVWFSYEVNCTNI
Trigger: GATGTTTGTACAATTTACCTCATAAGAGAACCACACCCTTCTCCAAAAGTGCTGGTACTGCATCAGTGAGATGAGTAGGGTTTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 90 bp GACAACGGGGGAATCTACAATGCTCACATCACAGTAAACTACCACTaGCTTACTAGGATCTTAATAGTCTTACAATCCCAAACAAAAACC +
Preference number: 1 (lower is better)
Translates to: DNGGIYNAHITVNYH*LTRILIVLQSQTKT
Trigger: GGTTTTTGTTTGGGATTGTAAGACTATTAAGATCCTAGTAAGTCAGTGGTAGTTTACTGTGATGTGAGCATTGTAGATTCCCCCGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 90 bp ATGTGTACAGTATATTTAACAATATCATGTTCCTTTGGAGCACAGTaGTGGCAAAAGTGGCCCTCAGCCACATTTATGTATGCATGTTCG +
Preference number: 1 (lower is better)
Translates to: MCTVYLTISCSFGAQ*WQKWPSATFMYACS
Trigger: CGAACATGCATACATAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATATTGTTAAATATACTGTACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 90 bp AACTTAGATGGTTTTGGTCCCAAACATATTAGTCTCTACCCTTCCTaGTATCCACTGCTGCTTTTGACTTTGTCCTTCATATTAACAGAT +
Preference number: 1 (lower is better)
Translates to: NLDGFGPKHISLYPS*YPLLLLTLSFILTD
Trigger: ATCTGTTAATATGAAGGACAAAGTCAAAAGCAGCAGTGGATAGCAGGAAGGGTAGAGACTAATATGTTTGGGACCAAAACCATCTAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGGGTCCAGTGGACACTaGTTTTCCCCCACAGAGAAT +
Preference number: 2 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDGSSGH*FSPTEN
Trigger: ATTCTCTGTGGGGGAAAAGCAGTGTCCACTGGACCC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGGCGCTGGAGAGCACTaGCAGGCAAATAAACACACA +
Preference number: 2 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDGAGEH*QANKHT
Trigger: TGTGTGTTTATTTGCCTGCCAGTGCTCTCCAGCGCC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTTGCAGTGACTGGACCTaGCTGTGGCCAAGCACATGT +
Preference number: 2 (lower is better)
Translates to: QPMTAPENAQPLCDLEISCSDWT*LWPSTC
Trigger: ACATGTGCTTGGCCACAGGCAGGTCCAGTCACTGCA...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAGGCATCACGTCAGGGTaGTGTCCAGGGCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLGITSG*CPGQDG
Trigger: GCCATCCTGCCCTGGACACCACCCTGACGTGATGCC...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTCGA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSSYSGG*GRRIAR
Trigger: TCGAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAGGGCAGGATGGCGCTaGAGAGCACTGGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSRAGWR*RALAGK
Trigger: TTTGCCTGCCAGTGCTCTCCAGCGCCATCCTGCCCT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTTCCCCTCAAGTTTACTaGGTTGGTGGAAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: QPMTAPENAQPLCDLEISSPQVY*VGGNVG
Trigger: GCCCACATTTCCACCAACTCAGTAAACTTGAGGGGA...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATTCAAGTTTACTGAGTTaGTGGAAATGTGGGCGTTCT +
Preference number: 2 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDSSLLS*WKCGRS
Trigger: AGAACGCCCACATTTCCACCAACTCAGTAAACTTGA...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTCCCTACTCATCTCACTaGTGCAGTACCAGCACTTTT +
Preference number: 2 (lower is better)
Translates to: QPMTAPENAQPLCDLEISPYSSH*CSTSTF
Trigger: AAAAGTGCTGGTACTGCATCAGTGAGATGAGTAGGG...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTTTAGTGGTGCTTGCTaGGCCTCAAACAGAAGCATC +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSFSGAC*ASNRSI
Trigger: GATGCTTCTGTTTGAGGCCCAGCAAGCACCACTAAA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCACTTTTGCAGTGACTaGACCTGCCTGTGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSHFCSD*TCLWPS
Trigger: GCTTGGCCACAGGCAGGTCCAGTCACTGCAAAAGTG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATCCTCTTCTCCAAATGTaGTGTTTGCTTAAATATGTG +
Preference number: 2 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDPLLQM*CLLKYV
Trigger: CACATATTTAAGCAAACATCACATTTGGAGAAGAGG...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCATAAAGCCTCTGAGCTaGAATAGAGGCATCACGTCA +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSIKPLS*NRGITS
Trigger: TGACGTGATGCCTCTATTGCAGCTCAGAGGCTTTAT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAGCAACTGGAAGAGATTaGGGGGAGCCTTATGTGCTG +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLATGRD*GEPYVL
Trigger: CAGCACATAAGGCTCCCCCCAATCTCTTCCAGTTGC...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCAACTTCTCCCCCAGATaGTTGACTAATCCCTCAAGT +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSNFSPR*LTNPSS
Trigger: ACTTGAGGGATTAGTCAACCATCTGGGGGAGAAGTT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAGGTCACTCTACCCTGTaGCTTGCTGTAGCAATGAGG +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLGHSTL*LAVAMR
Trigger: CCTCATTGCTACAGCAAGCCACAGGGTAGAGTGACC...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 90 bp AGCAATGAGGAAAAGGTCTATCAGCTAGGACCGTGCATGCTGTATTaGACAGTGAGCAACTTCTCCCCCAGATGGTTGACTAATCCCTCA +
Preference number: 2 (lower is better)
Translates to: SNEEKVYQLGPCMLY*TVSNFSPRWLTNPS
Trigger: TGAGGGATTAGTCAACCATCTGGGGGAGAAGTTGCTCACTGTCAAATACAGCATGCACGGTCCTAGCTGATAGACCTTTTCCTCATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 90 bp GCACCCTCAGCTTATTCCCAGGGTCCAGTTCCTAATTGTTGGGGATaGGCGCAAAATGATTACAATAAAGCACCAACCAATGACTGCTCC +
Preference number: 2 (lower is better)
Translates to: APSAYSQGPVPNCWG*AQNDYNKAPTNDCS
Trigger: GGAGCAGTCATTGGTTGGTGCTTTATTGTAATCATTTTGCGCCAATCCCCAACAATTAGGAACTGGACCCTGGGAATAAGCTGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCAACACAGTGTTGGACTaGGCTAGCCTTTGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSNTVLD*ASLCKE
Trigger: TTCTTTACAAAGGCTAGCTCAGTCCAACACTGTGTT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACCTAGGGGTGCCACATaGGAACCTGTCACCATTATA +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLPRGAT*EPVTII
Trigger: TATAATGGTGACAGGTTCTCATGTGGCACCCCTAGG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTATCTCCCCCAGATGGTTaGCTAATCCCTCAAGTGAAC +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLSPPDG*LIPQVN
Trigger: GTTCACTTGAGGGATTAGTCAACCATCTGGGGGAGA...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCACTGGAGTTTGTTACTaGAAACGACAGGGAAAGAGT +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSTGVCY*KRQGKS
Trigger: ACTCTTTCCCTGTCGTTTGCAGTAACAAACTCCAGT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGAGAACCTCACACACTaGTATGCTCCCATTTGTTTT +
Preference number: 2 (lower is better)
Translates to: QPMTAPENAQPLCDLEISENLTH*YAPICF
Trigger: AAAACAAATGGGAGCATAGCAGTGTGTGAGGTTCTC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTTTACCAGCACACCACTaGATTGGGAGAATGGGGAGA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSLPAHH*IGRMGR
Trigger: TCTCCCCATTCTCCCAATCCAGTGGTGTGCTGGTAA...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTTACCCTTTAAAGCCCTaGCCAGGGTCAGTGATAGGA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSYPLKP*PGSVIG
Trigger: TCCTATCACTGACCCTGGCCAGGGCTTTAAAGGGTA...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCGGTGTGGTTCTCTTATaGGGTAAATTGTACAAACAT +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSGVVLL*GKLYKH
Trigger: ATGTTTGTACAATTTACCTCATAAGAGAACCACACC...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAGGCGTTCTAGAGAACTaGCCTAATATAGACTACAGC +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLGVLEN*PNIDYS
Trigger: GCTGTAGTCTATATTAGGGCAGTTCTCTAGAACGCC...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAGAGTTCTTCACGAGGTaGCAACCAGCTCCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTEFFTR*QPAPLK
Trigger: CTTGAGGGGAGCTGGTTGGCACCTCGTGAAGAACTC...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTATATCAGCTAGGACCGTaGATGCTGTATTTGACAGTG +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLYQLGP*MLYLTV
Trigger: CACTGTCAAATACAGCATGCACGGTCCTAGCTGATA...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAAGGCAGAGACTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTRQRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAGTCTCTGCCT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCATTGTCAAGTATAACTaGTGGCAACAGAATTTCTCT +
Preference number: 2 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSIVKYN*WQQNFS
Trigger: AGAGAAATTCTGTTGCCACCAGTTATACTTGACAAT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAGTTTACTGAGTTGGTaGAAATGTGGGCGTTCTAGA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSSLLSW*KCGRSR
Trigger: TCTAGAACGCCCACATTTCCACCAACTCAGTAAACT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAAAGATGAAGCTGCTGTaGGCTTTTATTTGGTGTTGC +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLKMKLL*AFIWCC
Trigger: GCAACACCAAATAAAAGCCCACAGCAGCTTCATCTT...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 90 bp TCAGTTTGCCTTCAGCATCCAACTGCCACAGTGTGCTTTAAGTACTaGCCTGCAGATATTAATGCCCAAATAGCTCTGGTAAAACACACA +
Preference number: 2 (lower is better)
Translates to: SVCLQHPTATVCFKY*PADINAQIALVKHT
Trigger: TGTGTGTTTTACCAGAGCTATTTGGGCATTAATATCTGCAGGCAAGTACTTAAAGCACACTGTGGCAGTTGGATGCTGAAGGCAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAACTCACATATCTATTaGCATTTGTCACCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSNSHIY*HLSPWR
Trigger: TCTCCAGGGTGACAAATGCCAATAGATATGTGAGTT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 90 bp CATATTAGTCTCTACCCTTCCTGCTATCCACTGCTGCTTTTGACTTaGTCCTTCATATTAACAGATATAAGGCTCATAGCACTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: HISLYPSCYPLLLLT*SFILTDIRLIALQS
Trigger: GCTCTGCAGTGCTATGAGCCTTATATCTGTTAATATGAAGGACAAAGTCAAAAGCAGCAGTGGATAGCAGGAAGGGTAGAGACTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR TCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACTTTCACATATGCACTaGGTTATCGTAAAGATGAAG +
Preference number: 2 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLLSHMH*VIVKMK
Trigger: CTTCATCTTTACGATAACTCAGTGCATATGTGAAAG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATGTACAGTGGCATATTaGTGCTTCCCCAGATTGCCA +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTCTVAY*CFPRLP
Trigger: TGGCAATCTGGGGAAGCAGCAATATGCCACTGTACA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCCTTTCCCACATAACTaGGGAAAATTCACATCTTTT +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSPFPHN*GKFTSF
Trigger: AAAAGATGTGAATTTTCCCCAGTTATGTGGGAAAGG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTTCATTAAGCTTCTATTaGGCTTTCTGTCATCATCCA +
Preference number: 2 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSSLSFY*AFCHHP
Trigger: TGGATGATGACAGAAAGCCCAATAGAAGCTTAATGA...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 90 bp AGACAAGACAGTTCTCGAGAACCTCACACACTGCTATGCTCCCATTaGTTTTCAGGCTATATTACTAATCCTTTGCTATATCTGCATCTC +
Preference number: 2 (lower is better)
Translates to: RQDSSREPHTLLCSH*FSGYITNPLLYLHL
Trigger: GAGATGCAGATATAGCAAAGGATTAGTAATATAGCCTGAAAACAAATGGGAGCATAGCAGTGTGTGAGGTTCTCGAGAACTGTCTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACCAAGATTCCAGCAATaGATTCTCAACCTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTPRFQQ*ILNLVC
Trigger: GCAGACAAGGTTGAGAATCCATTGCTGGAATCTTGG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACGGGGGAATCTACAATaGTCACATCACAGTAAACTA +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTRGNLQ*SHHSKL
Trigger: TAGTTTACTGTGATGTGAGCATTGTAGATTCCCCCG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR GCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAGCTGCTTCCCCAGATTaGCATATAAGAATACTGATT +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTAASPD*HIRILI
Trigger: AATCAGTATTCTTATATGGCAATCTGGGGAAGCAGC...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAGTCAAGTATAACTGGTaGCAACAGAATTTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTVKYNW*QQNFSQ
Trigger: CTGAGAGAAATTCTGTTGCCACCAGTTATACTTGAC...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATTTTGGAGAAGGGTGTaGTTCTCTTATGAGGTAAAT +
Preference number: 2 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTFWRRV*FSYEVN
Trigger: ATTTACCTCATAAGAGAACCACACCCTTCTCCAAAA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 90 bp GCTTCTATTGGGCTTTCTGTCATCATCCATACCTCTAAATTGAGATaGGTTTCATTTATTCACCGACACTGTAGAACACATAATGAAATG +
Preference number: 2 (lower is better)
Translates to: ASIGLSVIIHTSKLR*VSFIHRHCRTHNEM
Trigger: CATTTCATTATGTGTTCTACAGTGTCGGTGAATAAATGAAACCAATCTCAATTTAGAGGTATGGATGATGACAGAAAGCCCAATAGAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp GTTAAGGGTGACCTGCTGGCTTGGTCACTTTTGCAGTaGCTGGACCTGCCTGTGGCCAAGCACATGTTCCAT +
Preference number: 3 (lower is better)
Translates to: VKGDLLAWSLLQ*LDLPVAKHMFH
Trigger: ATGGAACATGTGCTTGGCCACAGGCAGGTCCAGTCACTGCAAAAGTGACCAAGCCAGCAGGTCACCCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 72 bp CTGAAGTTAAGGGTGACCTGCTGGCTTGGTCACTTTTaGAGTGACTGGACCTGCCTGTGGCCAAGCACATGT +
Preference number: 3 (lower is better)
Translates to: LKLRVTCWLGHF*SDWTCLWPSTC
Trigger: ACATGTGCTTGGCCACAGGCAGGTCCAGTCACTGCAAAAGTGACCAAGCCAGCAGGTCACCCTTAACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp CTTCACGAGGTGCCAACCAGCTCCCCTCAAGTTTACTaGGTTGGTGGAAATGTGGGCGTTCTAGAGAACTGC +
Preference number: 3 (lower is better)
Translates to: LHEVPTSSPQVY*VGGNVGVLENC
Trigger: GCAGTTCTCTAGAACGCCCACATTTCCACCAACTCAGTAAACTTGAGGGGAGCTGGTTGGCACCTCGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTTGTACAGTGGCATATaGCTGCTTCCCCAGATTGCC +
Preference number: 3 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSLYSGI*LLPQIA
Trigger: GGCAATCTGGGGAAGCAGCAATATGCCACTGTACAA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATCTGCTATGCTCCCATTaGTTTTCAGGCTATATTACT +
Preference number: 3 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDLLCSH*FSGYIT
Trigger: AGTAATATAGCCTGAAAACAAATGGGAGCATAGCAG...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTTCTCCCCCAGATGGTaGACTAATCCCTCAAGTGAA +
Preference number: 3 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSFSPRW*TNPSSE
Trigger: TTCACTTGAGGGATTAGTCAACCATCTGGGGGAGAA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 72 bp TTACTGCAAACGACAGGGAAAGAGTTCTTCACGAGGTaGCAACCAGCTCCCCTCAAGTTTACTGAGTTGGTG +
Preference number: 3 (lower is better)
Translates to: LLQTTGKEFFTR*QPAPLKFTELV
Trigger: CACCAACTCAGTAAACTTGAGGGGAGCTGGTTGGCACCTCGTGAAGAACTCTTTCCCTGTCGTTTGCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 72 bp TGTAGCAATGAGGAAAAGGTCTATCAGCTAGGACCGTaGATGCTGTATTTGACAGTGAGCAACTTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: CSNEEKVYQLGP*MLYLTVSNFSP
Trigger: GGGGGAGAAGTTGCTCACTGTCAAATACAGCATGCACGGTCCTAGCTGATAGACCTTTTCCTCATTGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCCGTGCATGCTGTATTaGACAGTGAGCAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSPCMLY*TVSNFS
Trigger: GGAGAAGTTGCTCACTGTCAAATACAGCATGCACGG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp TTCCTAATTACACTCACCCTGACAGGGGCAGCTCCTTaGTGTAATGATTCAACAGACTACTGTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: FLITLTLTGAAP*CNDSTDYCLHR
Trigger: CCTGTGCAGACAGTAGTCTGTTGAATCATTACATCAAGGAGCTGCCCCTGTCAGGGTGAGTGTAATTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 72 bp TGGAGTTTGTTACTGCAACAGACTGGAGTTTGTTACTaGAAACGACAGGGAAAGAGTTCTTCACGAGGTGCC +
Preference number: 3 (lower is better)
Translates to: WSLLLQQTGVCY*KRQGKSSSRGA
Trigger: GGCACCTCGTGAAGAACTCTTTCCCTGTCGTTTGCAGTAACAAACTCCAGTCTGTTGCAGTAACAAACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 72 bp CCCTCAGCTTATTCCCAGGGTCCAGTTCCTAATTGTTaGGGATTGGCGCAAAATGATTACAATAAAGCACCA +
Preference number: 3 (lower is better)
Translates to: PSAYSQGPVPNC*GLAQNDYNKAP
Trigger: TGGTGCTTTATTGTAATCATTTTGCGCCAATCCCCAACAATTAGGAACTGGACCCTGGGAATAAGCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAGCAGTACCAGCACTTTaGGAGAAGGGTGTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTAVPAL*EKGVVL
Trigger: GAGAACCACACCCTTCTCCAAAAGTGCTGGTACTGC...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp GGAAAAGCACGAGTGTATGTAAACACAGTGTTGGACTaGGCTAGCCTTTGTAAAGAACACATCCAGTACCAG +
Preference number: 3 (lower is better)
Translates to: GKARVYVNTVLD*ASLCKEHIQYQ
Trigger: CTGGTACTGGATGTGTTCTTTACAAAGGCTAGCTCAGTCCAACACTGTGTTTACATACACTCGTGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp TCTTACAATCCCAAACAAAAACCCTACTCATCTCACTaGTGCAGTACCAGCACTTTTGGAGAAGGGTGTGGT +
Preference number: 3 (lower is better)
Translates to: SYNPKQKPYSSH*CSTSTFGEGCG
Trigger: ACCACACCCTTCTCCAAAAGTGCTGGTACTGCATCAGTGAGATGAGTAGGGTTTTTGTTTGGGATTGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 72 bp ACCCTACTCATCTCACTGATGCAGTACCAGCACTTTTaGAGAAGGGTGTGGTTCTCTTATGAGGTAAATTGT +
Preference number: 3 (lower is better)
Translates to: TLLISLMQYQHF*RRVWFSYEVNC
Trigger: ACAATTTACCTCATAAGAGAACCACACCCTTCTCCAAAAGTGCTGGTACTGCATCAGTGAGATGAGTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 72 bp TTATTTTTGGATAGGAGAACTGGTCACTCTACCCTGTaGCTTGCTGTAGCAATGAGGAAAAGGTCTATCAGC +
Preference number: 3 (lower is better)
Translates to: LFLDRRTGHSTL*LAVAMRKRSIS
Trigger: GCTGATAGACCTTTTCCTCATTGCTACAGCAAGCCACAGGGTAGAGTGACCAGTTCTCCTATCCAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAACTCCTACGGTGACCTaGACAAGTCCACGTCAATTC +
Preference number: 3 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTTPTVT*TSPRQF
Trigger: GAATTGACGTGGACTTGTCAAGGTCACCGTAGGAGT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTGGCTTTTATTTGGTGTaGCTTTACCTTTCCCACATA +
Preference number: 3 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSGFYLV*LYLSHI
Trigger: TATGTGGGAAAGGTAAAGCAACACCAAATAAAAGCC...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCCTAATTGTTGGGGATaGGCGCAAAATGATTACAAT +
Preference number: 3 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSPNCWG*AQNDYN
Trigger: ATTGTAATCATTTTGCGCCAATCCCCAACAATTAGG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 72 bp GGTTTTGGTCCCAAACATATTAGTCTCTACCCTTCCTaGTATCCACTGCTGCTTTTGACTTTGTCCTTCATA +
Preference number: 3 (lower is better)
Translates to: GFGPKHISLYPS*YPLLLLTLSFI
Trigger: TATGAAGGACAAAGTCAAAAGCAGCAGTGGATAGCAGGAAGGGTAGAGACTAATATGTTTGGGACCAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR GCA 72 bp TTTTCAGTTTGCCTTCAGCATCCAACTGCCACAGTGTaGTTTAAGTACTTGCCTGCAGATATTAATGCCCAA +
Preference number: 3 (lower is better)
Translates to: FSVCLQHPTATV*FKYLPADINAQ
Trigger: TTGGGCATTAATATCTGCAGGCAAGTACTTAAAGCACACTGTGGCAGTTGGATGCTGAAGGCAAACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 72 bp TCACTGATGCAGTACCAGCACTTTTGGAGAAGGGTGTaGTTCTCTTATGAGGTAAATTGTACAAACATCGCA +
Preference number: 3 (lower is better)
Translates to: SLMQYQHFWRRV*FSYEVNCTNIA
Trigger: TGCGATGTTTGTACAATTTACCTCATAAGAGAACCACACCCTTCTCCAAAAGTGCTGGTACTGCATCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 72 bp CTTATTCCCAGGGTCCAGTTCCTAATTGTTGGGGATTaGCGCAAAATGATTACAATAAAGCACCAACCAATG +
Preference number: 3 (lower is better)
Translates to: LIPRVQFLIVGD*RKMITIKHQPM
Trigger: CATTGGTTGGTGCTTTATTGTAATCATTTTGCGCCAATCCCCAACAATTAGGAACTGGACCCTGGGAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CCA 72 bp ATGCTGTATTTGACAGTGAGCAACTTCTCCCCCAGATaGTTGACTAATCCCTCAAGTGAACAATTTCATTTC +
Preference number: 3 (lower is better)
Translates to: MLYLTVSNFSPR*LTNPSSEQFHF
Trigger: GAAATGAAATTGTTCACTTGAGGGATTAGTCAACCATCTGGGGGAGAAGTTGCTCACTGTCAAATACAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAATCATTAAGCTTCTATaGGGCTTTCTGTCATCATCC +
Preference number: 3 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTIIKLL*GFLSSS
Trigger: GGATGATGACAGAAAGCCCAATAGAAGCTTAATGAT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATGTTCGCATTTATTTTaGGATAGGAGAACTGGTCAC +
Preference number: 3 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTCSHLF*DRRTGH
Trigger: GTGACCAGTTCTCCTATCCAAAAATAAATGCGAACA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp GTACCAGCACTTTTGGAGAAGGGTGTGGTTCTCTTATaGGGTAAATTGTACAAACATCGCAACAAATTTCTA +
Preference number: 3 (lower is better)
Translates to: VPALLEKGVVLL*GKLYKHRNKFL
Trigger: TAGAAATTTGTTGCGATGTTTGTACAATTTACCTCATAAGAGAACCACACCCTTCTCCAAAAGTGCTGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp GTATATTTAACAATATCATGTTCCTTTGGAGCACAGTaGTGGCAAAAGTGGCCCTCAGCCACATTTATGTAT +
Preference number: 3 (lower is better)
Translates to: VYLTISCSFGAQ*WQKWPSATFMY
Trigger: ATACATAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATATTGTTAAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR-3UTR CAA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAAACTTTTCTTCAGTTTaGTACAGTGGCATATTGCTG +
Preference number: 3 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTNFSSV*YSGILL
Trigger: CAGCAATATGCCACTGTACAAAACTGAAGAAAAGTT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp GGAATCTACAATGCTCACATCACAGTAAACTACCACTaGCTTACTAGGATCTTAATAGTCTTACAATCCCAA +
Preference number: 3 (lower is better)
Translates to: GIYNAHITVNYH*LTRILIVLQSQ
Trigger: TTGGGATTGTAAGACTATTAAGATCCTAGTAAGTCAGTGGTAGTTTACTGTGATGTGAGCATTGTAGATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR TCA 72 bp TATAGACTACAGCTAAGAGGGATGAATATAACTTTCTaGGCTTCAACTAAATTGTCAAGTATAACTGGTGGC +
Preference number: 3 (lower is better)
Translates to: YRLQLRGMNITF*ASTKLSSITGG
Trigger: GCCACCAGTTATACTTGACAATTTAGTTGAAGCTCAGAAAGTTATATTCATCCCTCTTAGCTGTAGTCTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTAGCCGGAAGAATGCATaGCCGGCGGCGGGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISSRKNA*PAAGPA
Trigger: CGCCGGCCCCGCCGCCGGCCATGCATTCTTCCGGCT...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGGTGGGCAGATCACCTaGGGTCAGGAGTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDGGQIT*GQEFEA
Trigger: GGCCTCGAACTCCTGACCTCAGGTGATCTGCCCACC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGAGGAGCCGGAAGAATaGATGGCCGGCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISEEPEE*MAGGGA
Trigger: GGCCCCGCCGCCGGCCATGCATTCTTCCGGCTCCTC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTCCCCAGCCGGGGCTTTaGGAGTCAGAGGAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISPQPGL*ESEEPE
Trigger: TTCCGGCTCCTCTGACTCCCAAAGCCCCGGCTGGGG...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGACTGGACCTGCCTGTaGCCAAGCACATGTTCCATC +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDDWTCL*PSTCSI
Trigger: GATGGAACATGTGCTTGGCCACAGGCAGGTCCAGTC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGGTCACTCTACCCTGTaGCTTGCTGTAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDGHSTL*LAVAMR
Trigger: CCTCATTGCTACAGCAAGCCACAGGGTAGAGTGACC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATTCCCCTCAAGTTTACTaGGTTGGTGGAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDSPQVY*VGGNVG
Trigger: GCCCACATTTCCACCAACTCAGTAAACTTGAGGGGA...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCGATGGGGCAGTGGTGTaGTGGATACAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSDGAVV*WIQPLL
Trigger: CAGTAGGGGCTGTATCCAGCACACCACTGCCCCATC...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATTTACCAGCACACCACTaGATTGGGAGAATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDLPAHH*IGRMGR
Trigger: TCTCCCCATTCTCCCAATCCAGTGGTGTGCTGGTAA...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGCCTGCTCATACAGCTaGCTTCTTAGAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDACSYS*LLRAKR
Trigger: TCTTTTGGCTCTAAGAAGTCAGCTGTATGAGCAGGC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTGCAGTGACTGGACCTaGCTGTGGCCAAGCACATGT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSCSDWT*LWPSTC
Trigger: ACATGTGCTTGGCCACAGGCAGGTCCAGTCACTGCA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATAAGTTAAGGGTGACCTaGTGGCTTGGTCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDKLRVT*WLGHFC
Trigger: GCAAAAGTGACCAAGCCAGCAGGTCACCCTTAACTT...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGCACCAACCAATGACTaGTCCAGAGAATGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISAPTND*SRECPA
Trigger: GGCTGGGCATTCTCTGGAGCAGTCATTGGTTGGTGC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTGGCATCACGTCAGGGTaGTGTCCAGGGCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSGITSG*CPGQDG
Trigger: GCCATCCTGCCCTGGACACCACCCTGACGTGATGCC...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCGGGTCCAGTGGACACTaGTTTTCCCCCACAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSGSSGH*FSPTEN
Trigger: ATTCTCTGTGGGGGAAAAGCAGTGTCCACTGGACCC...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATATAAAGCCTCTGAGCTaGAATAGAGGCATCACGTCA +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDIKPLS*NRGITS
Trigger: TGACGTGATGCCTCTATTGCAGCTCAGAGGCTTTAT...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATCTCAAAATTGTTGTGTaGTTAGTGACAACGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDLKIVV*LVTTGE
Trigger: TTCCCCCGTTGTCACTAATCACACAACAATTTTGAG...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTCTCCCCCAGATGGTTaGCTAATCCCTCAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSSPPDG*LIPQVN
Trigger: GTTCACTTGAGGGATTAGTCAACCATCTGGGGGAGA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATGAGAACCTCACACACTaGTATGCTCCCATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDENLTH*YAPICF
Trigger: AAAACAAATGGGAGCATAGCAGTGTGTGAGGTTCTC...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTACCCTTTAAAGCCCTaGCCAGGGTCAGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSYPLKP*PGSVIG
Trigger: TCCTATCACTGACCCTGGCCAGGGCTTTAAAGGGTA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCCCCTACTCATCTCACTaGTGCAGTACCAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSPYSSH*CSTSTF
Trigger: AAAAGTGCTGGTACTGCATCAGTGAGATGAGTAGGG...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTTGTACAGTGGCATATTaGTGCTTCCCCAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISCTVAY*CFPRLP
Trigger: TGGCAATCTGGGGAAGCAGCAATATGCCACTGTACA...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACACTTTTGCAGTGACTaGACCTGCCTGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLHFCSD*TCLWPS
Trigger: GCTTGGCCACAGGCAGGTCCAGTCACTGCAAAAGTG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAGGCAGAGACTGCAGTaGGCTGAGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSRQRLQ*AEIMPL
Trigger: CAGTGGCATAATCTCAGCTCACTGCAGTCTCTGCCT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATCTTTCACATATGCACTaGGTTATCGTAAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDLSHMH*VIVKMK
Trigger: CTTCATCTTTACGATAACTCAGTGCATATGTGAAAG...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTTCCTTTGGAGCACAGTaGTGGCAAAAGTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSSFGAQ*WQKWPS
Trigger: TGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGA...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATTCAGCAATAGATCTCTaGGTGCTTCCAATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDSAIDL*VLPICF
Trigger: AAAACAAATTGGAAGCACTCAGAGATCTATTGCTGA...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCCATATCAGCATGTTATaGTATGGTCACGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSHISML*YGHACS
Trigger: TGAGCAGGCGTGACCATATCATAACATGCTGATATG...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTGGCAAACCTCATCAGTaGTTTCACCAAGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSGKPHQ*FHQEPA
Trigger: GGCTGGCTCTTGGTGAAAGCACTGATGAGGTTTGCC...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGGCGTTCTAGAGAACTaGCCTAATATAGACTACAGC +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISGVLEN*PNIDYS
Trigger: GCTGTAGTCTATATTAGGGCAGTTCTCTAGAACGCC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCACAGTGGCATATTGCTaGTTCCCCAGATTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSTVAYC*FPRLPY
Trigger: ATATGGCAATCTGGGGAAGCAGCAATATGCCACTGT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTGGCGCTGGAGAGCACTaGCAGGCAAATAAACACACA +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSGAGEH*QANKHT
Trigger: TGTGTGTTTATTTGCCTGCCAGTGCTCTCCAGCGCC...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTGCAACTGGAAGAGATTaGGGGGAGCCTTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSATGRD*GEPYVL
Trigger: CAGCACATAAGGCTCCCCCCAATCTCTTCCAGTTGC...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAAGCACACCACTGGATTaGGAGAATGGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLSTPLD*ENGEKG
Trigger: CCCTTTCTCCCCATTCTCCCAATCCAGTGGTGTGCT...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 72 bp GAAAAGGTCTATCAGCTAGGACCGTGCATGCTGTATTaGACAGTGAGCAACTTCTCCCCCAGATGGTTGACT +
Preference number: 4 (lower is better)
Translates to: EKVYQLGPCMLY*TVSNFSPRWLT
Trigger: AGTCAACCATCTGGGGGAGAAGTTGCTCACTGTCAAATACAGCATGCACGGTCCTAGCTGATAGACCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTCGA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTSYSGG*GRRIAR
Trigger: TCGAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTACTGGAGTTTGTTACTaGAAACGACAGGGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISTGVCY*KRQGKS
Trigger: ACTCTTTCCCTGTCGTTTGCAGTAACAAACTCCAGT...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCCGGGGGAATCTACAATaGTCACATCACAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSRGNLQ*SHHSKL
Trigger: TAGTTTACTGTGATGTGAGCATTGTAGATTCCCCCG...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATATTGTCAAGTATAACTaGTGGCAACAGAATTTCTCT +
Preference number: 4 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDIVKYN*WQQNFS
Trigger: AGAGAAATTCTGTTGCCACCAGTTATACTTGACAAT...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCAGTTTACTGAGTTGGTaGAAATGTGGGCGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSSLLSW*KCGRSR
Trigger: TCTAGAACGCCCACATTTCCACCAACTCAGTAAACT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAAGGGCAGGATGGCGCTaGAGAGCACTGGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTRAGWR*RALAGK
Trigger: TTTGCCTGCCAGTGCTCTCCAGCGCCATCCTGCCCT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAAAATTAGCCAAGCATaGTGGTGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSKISQA*WWVPVV
Trigger: GACTACAGGCACCCACCATCATGCTTGGCTAATTTT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCCAAAATAATTTTTGTTaGCCCAGACCTTGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSQNNFC*PRPWQS
Trigger: ACTCTGCCAAGGTCTGGGGCAACAAAAATTATTTTG...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCGCTGCTTCCCCAGATTaGCATATAAGAATACTGATT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSAASPD*HIRILI
Trigger: AATCAGTATTCTTATATGGCAATCTGGGGAAGCAGC...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACCAACTGCCACAGTGTaGTTTAAGTACTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLPTATV*FKYLPA
Trigger: TGCAGGCAAGTACTTAAAGCACACTGTGGCAGTTGG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTATAGCAGATGTAGGATaGAATAGCAACCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISIADVG*NSNQVV
Trigger: AACAACCTGGTTGCTATTCCATCCTACATCTGCTAT...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGTCAAGTATAACTGGTaGCAACAGAATTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISVKYNW*QQNFSQ
Trigger: CTGAGAGAAATTCTGTTGCCACCAGTTATACTTGAC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTTTTAGTGGTGCTTGCTaGGCCTCAAACAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSFSGAC*ASNRSI
Trigger: GATGCTTCTGTTTGAGGCCCAGCAAGCACCACTAAA...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGGTGTGGTTCTCTTATaGGGTAAATTGTACAAACAT +
Preference number: 4 (lower is better)
Translates to: QPMTAPENAQPLCDLEISGVVLL*GKLYKH
Trigger: ATGTTTGTACAATTTACCTCATAAGAGAACCACACC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACAACAGACTACTGTCTaGACAGGTCCTAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTQQTTV*TGPRGA
Trigger: GGCACCCCTAGGACCTGTGCAGACAGTAGTCTGTTG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTTTTGGAGAAGGGTGTaGTTCTCTTATGAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSFWRRV*FSYEVN
Trigger: ATTTACCTCATAAGAGAACCACACCCTTCTCCAAAA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCTCATTAAGCTTCTATTaGGCTTTCTGTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSSLSFY*AFCHHP
Trigger: TGGATGATGACAGAAAGCCCAATAGAAGCTTAATGA...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAAACTTCTCCCCCAGATaGTTGACTAATCCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLNFSPR*LTNPSS
Trigger: ACTTGAGGGATTAGTCAACCATCTGGGGGAGAAGTT...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACCAAGATTCCAGCAATaGATTCTCAACCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLPRFQQ*ILNLVC
Trigger: GCAGACAAGGTTGAGAATCCATTGCTGGAATCTTGG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAATTTTATCTTCCATGTaGCTACAGTCACCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLILSSM*LQSPFP
Trigger: GGGGAAGGGTGACTGTAGCCACATGGAAGATAAAAT...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTAGACGCTTCTTAACATaGATCCAAGACAGCAACACT +
Preference number: 4 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSRRFLT*IQDSNT
Trigger: AGTGTTGCTGTCTTGGATTCATGTTAAGAAGCGTCT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTATCAAGTTTACTGAGTTaGTGGAAATGTGGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLSSLLS*WKCGRS
Trigger: AGAACGCCCACATTTCCACCAACTCAGTAAACTTGA...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACCTAGGGGTGCCACATaGGAACCTGTCACCATTATA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTPRGAT*EPVTII
Trigger: TATAATGGTGACAGGTTCTCATGTGGCACCCCTAGG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACAACCTTGTCTGCTGTaGGAATCTAGGCAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTQPCLL*ESRQSS
Trigger: GCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 72 bp GCTTATTCCCAGGGTCCAGTTCCTAATTGTTGGGGATaGGCGCAAAATGATTACAATAAAGCACCAACCAAT +
Preference number: 4 (lower is better)
Translates to: AYSQGPVPNCWG*AQNDYNKAPTN
Trigger: ATTGGTTGGTGCTTTATTGTAATCATTTTGCGCCAATCCCCAACAATTAGGAACTGGACCCTGGGAATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAATATCCACAAGTTGCTaGGGGTCATCTCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTISTSC*GSSPWK
Trigger: TTTCCAGGGAGATGACCCTCAGCAACTTGTGGATAT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACAGTACCAGCACTTTTaGAGAAGGGTGTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTQYQHF*RRVWFS
Trigger: AGAGAACCACACCCTTCTCCAAAAGTGCTGGTACTG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACCTTTCCCACATAACTaGGGAAAATTCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLPFPHN*GKFTSF
Trigger: AAAAGATGTGAATTTTCCCCAGTTATGTGGGAAAGG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATTAAGGGTGACCTGCTaGCTTGGTCACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTLRVTC*LGHFCS
Trigger: ACTGCAAAAGTGACCAAGCCAGCAGGTCACCCTTAA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 72 bp CTGTATTTGACAGTGAGCAACTTCTCCCCCAGATGGTaGACTAATCCCTCAAGTGAACAATTTCATTTCATC +
Preference number: 4 (lower is better)
Translates to: LYLTVSNFSPRW*TNPSSEQFHFI
Trigger: GATGAAATGAAATTGTTCACTTGAGGGATTAGTCAACCATCTGGGGGAGAAGTTGCTCACTGTCAAATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 72 bp CTCTACCCTTCCTGCTATCCACTGCTGCTTTTGACTTaGTCCTTCATATTAACAGATATAAGGCTCATAGCA +
Preference number: 4 (lower is better)
Translates to: LYPSCYPLLLLT*SFILTDIRLIA
Trigger: TGCTATGAGCCTTATATCTGTTAATATGAAGGACAAAGTCAAAAGCAGCAGTGGATAGCAGGAAGGGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR GCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAGCACACATCTCCTGTTaGCTGATGATTCACCAACAT +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTAHISC*LMIHQH
Trigger: ATGTTGGTGAATCATCAGGCAACAGGAGATGTGTGC...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAACTGGATTGGGAGAATaGGGAGAAAGGGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTTGLGE*GERGKY
Trigger: ATATTTCCCCCTTTCTCCCCATTCTCCCAATCCAGT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACAGCATGTTATGATATaGTCACGCCTGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTQHVMI*SRLLIQ
Trigger: CTGTATGAGCAGGCGTGACCATATCATAACATGCTG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACAAAGATGAAGCTGCTGTaGGCTTTTATTTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTKMKLL*AFIWCC
Trigger: GCAACACCAAATAAAAGCCCACAGCAGCTTCATCTT...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATTCAGTTTTGTACAGTaGCATATTGCTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTFSFVQ*HIAASP
Trigger: TGGGGAAGCAGCAATATGCCACTGTACAAAACTGAA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACCAGTTCCTAATTGTTaGGGATTGGCGCAAAATGAT +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTPVPNC*GLAQND
Trigger: ATCATTTTGCGCCAATCCCCAACAATTAGGAACTGG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATTTCTCCCAGAAGAGTaGACTGCTAAACATTTACCA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTFLPEE*TAKHLP
Trigger: TGGTAAATGTTTAGCAGTTCACTCTTCTGGGAGAAA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 72 bp AGTTCTCGAGAACCTCACACACTGCTATGCTCCCATTaGTTTTCAGGCTATATTACTAATCCTTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: SSREPHTLLCSH*FSGYITNPLLY
Trigger: ATATAGCAAAGGATTAGTAATATAGCCTGAAAACAAATGGGAGCATAGCAGTGTGTGAGGTTCTCGAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACATTTTGGAATTCTCAGTaGATTTGTTTGCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTFWNSQ*ICLLAQ
Trigger: TTGGGCAAGCAAACAAATTCACTGAGAATTCCAAAA...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR TCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACAAGAAGACTATCCATaGTTAAAGGCTACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTQEDYP*LKATLY
Trigger: ATAGAGAGTAGCCTTTAATCATGGATAGTCTTCTTG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
3UTR CAA 72 bp TCTATTGGGCTTTCTGTCATCATCCATACCTCTAAATaGAGATTGGTTTCATTTATTCACCGACACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SIGLSVIIHTSK*RLVSFIHRHCR
Trigger: TCTACAGTGTCGGTGAATAAATGAAACCAATCTCAATTTAGAGGTATGGATGATGACAGAAAGCCCAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CCA 90 bp GTATTTCCTCTTCCTGATAGCTGTCTTTCCGCATCATTTCACTACTCATTAACACTAATTGTTGGGGATTaGCGCAAAATGATTACAATA +
Preference number: 4 (lower is better)
Translates to: VFPLPDSCLSASFHYSLTLIVGD*RKMITI
Trigger: TATTGTAATCATTTTGCGCCAATCCCCAACAATTAG...TGTTAATGAGTAGTGAAATGATGCGGAAAGACAGCTATCAGGAAGAGGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS GCA 90 bp GGTCGCGGTCATGGACGCGGTGGCGGCCCAAGCGGCCCGAGGCGCTaGGCGAGCGGGCGCGCTGGCGCCCTACTCCCCTCGCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GRGHGRGGGPSGPRR*ASGRAGALLPSRLP
Trigger: AGGCAGCCGCGAGGGGAGTAGGGCGCCAGCGCGCCCGCTCGCGCAGCGCCTCGGGCCGCTTGGGCCGCCACCGCGTCCATGACCGCGACC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488600.1
CDS GCA 90 bp AGGGGCAGAGAAGAGGCGACCGCAGCGCGGGGAGCCGGTGGAGCCTaGAGCGGTTTCCGCGGATGTGGAAGGGTCGTGGCGGCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: RGREEATAARGAGGA*SGFRGCGRVVAAGA
Trigger: CGCGCCCGCCGCCACGACCCTTCCACATCCGCGGAAACCGCTGCAGGCTCCACCGGCTCCCCGCGCTGCGGTCGCCTCTTCTCTGCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366996.1
CDS-3UTR CAA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATATAGCAACCAGGTTGTaGACGACCATGAAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDIATRL*TTMKAN
Trigger: GTTTGCCTTCATGGTCGTCAACAACCTGGTTGCTAT...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCCAGCACACCACTGGATaGGGAGAATGGGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSQHTTG*GEWGER
Trigger: CCTTTCTCCCCATTCTCCCAATCCAGTGGTGTGCTG...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS GCA 90 bp AATAGCAACCAGGTTGTTGACGACCATGAAGGCAAACCTCATCAGTaGTTTCACCAAGAGCCAGCCCAGCCACGGAGCTTCTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: NSNQVVDDHEGKPHQ*FHQEPAQPRSFFQS
Trigger: ACTTTGGAAGAAGCTCCGTGGCTGGGCTGGCTCTTGGTGAAAGCACTGATGAGGTTTGCCTTCATGGTCGTCAACAACCTGGTTGCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366996.1
ENST00000366997.9
ENST00000488600.1
CDS-3UTR CAA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTGGAATAGCAACCAGGTaGTTGACGACCATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: QPMTAPENAQPLCDLEISGIATR*LTTMKA
Trigger: TGCCTTCATGGTCGTCAACAACCTGGTTGCTATTCC...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCACTCCTACGGTGACCTaGACAAGTCCACGTCAATTC +
Preference number: 5 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSTPTVT*TSPRQF
Trigger: GAATTGACGTGGACTTGTCAAGGTCACCGTAGGAGT...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTCCGTGCATGCTGTATTaGACAGTGAGCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: QPMTAPENAQPLCDLEISPCMLY*TVSNFS
Trigger: GGAGAAGTTGCTCACTGTCAAATACAGCATGCACGG...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTTTGTACAGTGGCATATaGCTGCTTCCCCAGATTGCC +
Preference number: 5 (lower is better)
Translates to: QPMTAPENAQPLCDLEISLYSGI*LLPQIA
Trigger: GGCAATCTGGGGAAGCAGCAATATGCCACTGTACAA...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp AAGCCTCTGAGCTGCAATAGAGGCATCACGTCAGGGTGGTGTCCAGGGCAGGATTGTTCGCATTTATTTTaGGATAGGAGAACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: KPLSCNRGITSGWCPGQDCSHLF*DRRTGH
Trigger: GTGACCAGTTCTCCTATCCAAAAATAAATGCGAACA...ATCCTGCCCTGGACACCACCCTGACGTGATGCCTCTATTGCAGCTCAGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTTCCCCAGTCTGTTCCTaGTCTTCCACAGAAAGTAGT +
Preference number: 5 (lower is better)
Translates to: QPMTAPENAQPLCDLEISSPVCS*SSTESS
Trigger: ACTACTTTCTGTGGAAGACAAGGAACAGACTGGGGA...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAGCAGTACCAGCACTTTaGGAGAAGGGTGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLAVPAL*EKGVVL
Trigger: GAGAACCACACCCTTCTCCAAAAGTGCTGGTACTGC...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS TCA 90 bp GCTTCAGACAACCTCAGGATCTCCAAACTGAAGACACAAGTGACATaGCCGAAACAGGGTCCCCTCAATAAGATTTCCCAGATACTGAGG +
Preference number: 5 (lower is better)
Translates to: ASDNLRISKLKTQVT*PKQGPLNKISQILR
Trigger: CCTCAGTATCTGGGAAATCTTATTGAGGGGACCCTGTTTCGGTCATGTCACTTGTGTCTTCAGTTTGGAGATCCTGAGGTTGTCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366996.1
CDS-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCTGAGTGCTTCCAATTaGTTTTCAGGCCTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSLSASN*FSGLCP
Trigger: GGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTATGCACACATCTCCTGTaGCCTGATGATTCACCAACA +
Preference number: 5 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLCTHLL*PDDSPT
Trigger: TGTTGGTGAATCATCAGGCAACAGGAGATGTGTGCA...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCGGCTTTTATTTGGTGTaGCTTTACCTTTCCCACATA +
Preference number: 5 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSGFYLV*LYLSHI
Trigger: TATGTGGGAAAGGTAAAGCAACACCAAATAAAAGCC...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTATTCTCCCCCAGATGGTaGACTAATCCCTCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLFSPRW*TNPSSE
Trigger: TTCACTTGAGGGATTAGTCAACCATCTGGGGGAGAA...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CAACCAATGACTGCTCCAGAGAATGCCCAGCCCCTCTGTGATCTGGAAATCTCTAACTTTTCTTCAGTTTaGTACAGTGGCATATTGCTG +
Preference number: 5 (lower is better)
Translates to: QPMTAPENAQPLCDLEISNFSSV*YSGILL
Trigger: CAGCAATATGCCACTGTACAAAACTGAAGAAAAGTT...AGAGATTTCCAGATCACAGAGGGGCTGGGCATTCTCTGGAGCAGTCATTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp CTCAACCTTGTCTGCTGTGGGAATCTAGGCAGTCTAGCCAAGACCAAGAAGAGCCTGCTGCTTTTGACTTaGTCCTTCATATTAACAGAT +
Preference number: 5 (lower is better)
Translates to: LNLVCCGNLGSLAKTKKSLLLLT*SFILTD
Trigger: ATCTGTTAATATGAAGGACAAAGTCAAAAGCAGCAG...GCTCTTCTTGGTCTTGGCTAGACTGCCTAGATTCCCACAGCAGACAAGGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS TCA 90 bp CATACCATCCCCAGGAAGCTACCATTCCTAAAAGCCATTTATACATaGTTCCTTCGATATACCAGAACCGCTTACTGTCCAGCACTCGAA +
Preference number: 5 (lower is better)
Translates to: HTIPRKLPFLKAIYT*FLRYTRTAYCPALE
Trigger: TTCGAGTGCTGGACAGTAAGCGGTTCTGGTATATCGAAGGAATCATGTATAAATGGCTTTTAGGAATGGTAGCTTCCTGGGGATGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366996.1
ENST00000366997.9
CDS-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCAATATCATGTTCCTTaGGAGCACAGTGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSQYHVP*EHSDGK
Trigger: TTTGCCATCACTGTGCTCCAAAGGAACATGATATTG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTATTTGGTTTTTCAGTTaGCCTTCAGCATCCAACTGC +
Preference number: 5 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSIWFFS*PSASNC
Trigger: GCAGTTGGATGCTGAAGGCAAACTGAAAAACCAAAT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTATGGAGGCCTTTTGATTaGCTGTCTAATTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLWRPFD*LSNSLA
Trigger: TGCTAAAGAATTAGACAGCAAATCAAAAGGCCTCCA...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTCTGCTATGCTCCCATTaGTTTTCAGGCTATATTACT +
Preference number: 5 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSLLCSH*FSGYIT
Trigger: AGTAATATAGCCTGAAAACAAATGGGAGCATAGCAG...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp AGCAATAGATCTCTGAGTGCTTCCAATTTGTTTTCAGGCCTCTGTCCCCAGTCTATCATTAAGCTTCTATaGGGCTTTCTGTCATCATCC +
Preference number: 5 (lower is better)
Translates to: SNRSLSASNLFSGLCPQSIIKLL*GFLSSS
Trigger: GGATGATGACAGAAAGCCCAATAGAAGCTTAATGAT...AGACTGGGGACAGAGGCCTGAAAACAAATTGGAAGCACTCAGAGATCTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTACCTAATTGTTGGGGATaGGCGCAAAATGATTACAAT +
Preference number: 5 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLPNCWG*AQNDYN
Trigger: ATTGTAATCATTTTGCGCCAATCCCCAACAATTAGG...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS-3UTR CAA 90 bp TATCATGTTCCTTTGGAGCACAGTGATGGCAAAAGTGGCCCTCAGCCACATTTAGAATTTTGCCTGCAGTaGTTAAGCATTGGTTATGAA +
Preference number: 5 (lower is better)
Translates to: YHVPLEHSDGKSGPQPHLEFCLQ*LSIGYE
Trigger: TTCATAACCAATGCTTAACAACTGCAGGCAAAATTC...TAAATGTGGCTGAGGGCCACTTTTGCCATCACTGTGCTCCAAAGGAACATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS CCA 72 bp GGCTGCCTCGGGCTGGCCGGGCCCCAGCCGGGGCTTTaGGAGTCAGAGGAGCCGGAAGAATGCATGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GCLGLAGPQPGL*ESEEPEECMAG
Trigger: GCCGGCCATGCATTCTTCCGGCTCCTCTGACTCCCAAAGCCCCGGCTGGGGCCCGGCCAGCCCGAGGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488600.1
CDS CAA 72 bp CGGCTGCCTCGGGCTGGCCGGGCCCCAGCCGGGGCTTaGGGAGTCAGAGGAGCCGGAAGAATGCATGGCCGG +
Preference number: 6 (lower is better)
Translates to: RLPRAGRAPAGA*GVRGAGRMHGR
Trigger: CCGGCCATGCATTCTTCCGGCTCCTCTGACTCCCAAAGCCCCGGCTGGGGCCCGGCCAGCCCGAGGCAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488600.1
CDS GCA 72 bp GAAGAGGCGACCGCAGCGCGGGGAGCCGGTGGAGCCTaGAGCGGTTTCCGCGGATGTGGAAGGGTCGTGGCG +
Preference number: 6 (lower is better)
Translates to: EEATAARGAGGA*SGFRGCGRVVA
Trigger: CGCCACGACCCTTCCACATCCGCGGAAACCGCTGCAGGCTCCACCGGCTCCCCGCGCTGCGGTCGCCTCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366996.1
CDS CCA 72 bp GGGCAGAGAAGAGGCGACCGCAGCGCGGGGAGCCGGTaGAGCCTGCAGCGGTTTCCGCGGATGTGGAAGGGT +
Preference number: 6 (lower is better)
Translates to: GQRRGDRSAGSR*SLQRFPRMWKG
Trigger: ACCCTTCCACATCCGCGGAAACCGCTGCAGGCTCCACCGGCTCCCCGCGCTGCGGTCGCCTCTTCTCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366996.1
CDS CCA 72 bp GTCTTTCTCGGGCTGGCCGGGCCCCAGCCGGGGCTTTaGGAGTCAGAGGAGCCGGAAGAATGCATGGCCGGC +
Preference number: 6 (lower is better)
Translates to: VFLGLAGPQPGL*ESEEPEECMAG
Trigger: GCCGGCCATGCATTCTTCCGGCTCCTCTGACTCCCAAAGCCCCGGCTGGGGCCCGGCCAGCCCGAGAAAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS CAA 72 bp TGTCTTTCTCGGGCTGGCCGGGCCCCAGCCGGGGCTTaGGGAGTCAGAGGAGCCGGAAGAATGCATGGCCGG +
Preference number: 6 (lower is better)
Translates to: CLSRAGRAPAGA*GVRGAGRMHGR
Trigger: CCGGCCATGCATTCTTCCGGCTCCTCTGACTCCCAAAGCCCCGGCTGGGGCCCGGCCAGCCCGAGAAAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366997.9
CDS GCA 72 bp CAGGTTGTTGACGACCATGAAGGCAAACCTCATCAGTaGTTTCACCAAGAGCCAGCCCAGCCACGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: QVVDDHEGKPHQ*FHQEPAQPRSF
Trigger: GAAGCTCCGTGGCTGGGCTGGCTCTTGGTGAAAGCACTGATGAGGTTTGCCTTCATGGTCGTCAACAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366996.1
ENST00000366997.9
ENST00000488600.1
CDS TCA 72 bp CGAAACAGGGTCCCCTCAATAAGATTTCCCAGATACTaGGGACCTCAGTCTCCTCACCACCACGATTCCTGC +
Preference number: 6 (lower is better)
Translates to: RNRVPSIRFPRY*GPQSPHHHDSC
Trigger: GCAGGAATCGTGGTGGTGAGGAGACTGAGGTCCTCAGTATCTGGGAAATCTTATTGAGGGGACCCTGTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366996.1
CDS TCA 72 bp AACCTCAGGATCTCCAAACTGAAGACACAAGTGACATaGCCGAAACAGGGTCCCCTCAATAAGATTTCCCAG +
Preference number: 6 (lower is better)
Translates to: NLRISKLKTQVT*PKQGPLNKISQ
Trigger: CTGGGAAATCTTATTGAGGGGACCCTGTTTCGGTCATGTCACTTGTGTCTTCAGTTTGGAGATCCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366996.1
CDS TCA 72 bp CCCAGGAAGCTACCATTCCTAAAAGCCATTTATACATaGTTCCTTCGATATACCAGAACCGCTTACTGTCCA +
Preference number: 6 (lower is better)
Translates to: PRKLPFLKAIYT*FLRYTRTAYCP
Trigger: TGGACAGTAAGCGGTTCTGGTATATCGAAGGAATCATGTATAAATGGCTTTTAGGAATGGTAGCTTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366996.1
ENST00000366997.9