RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPCAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153395

Ensembl transcript IDs: ENST00000283415.4, ENST00000475622.5, ENST00000503252.1, ENST00000507282.1, ENST00000513757.5, ENST00000514484.6, ENST00000611696.3, ENST00000625809.2, ENST00000626080.1, ENST00000626646.1, ENST00000627408.2, ENST00000627969.2, ENST00000628540.1

Found 816 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGGGCCCCGTGGGAGAACACGGGGCGG +
Preference number: 1 (lower is better)
Translates to: VHGGPPGARCRRKRL*QRLETRAPWENTGR
Trigger: CCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 90 bp GGCAGGACCCCCGCTCTCAGTGGGATGTGCCCGCGACCCTGGCGCTaGGAGGCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCA +
Preference number: 1 (lower is better)
Translates to: GRTPALSGMCPRPWR*EAVLQRGVVSARLS
Trigger: TGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 90 bp AGATGGGGCAGGACCCCCGCTCTCAGTGGGATGTGCCCGCGACCCTaGCGCTGGGAGGCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGG +
Preference number: 1 (lower is better)
Translates to: RWGRTPALSGMCPRP*RWEAVLQRGVVSAR
Trigger: CCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTCCTGCCCCATCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 90 bp GAAACCAGGGCTGACAGGAAGATGCAGCCGCTTCCAGCAGGGACCTaGCCTGAGGGCAAGGGAGGAGCGGCACGGCGGCGGCTGCCTTGC +
Preference number: 1 (lower is better)
Translates to: ETRADRKMQPLPAGT*PEGKGGAARRRLPC
Trigger: GCAAGGCAGCCGCCGCCGTGCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCTGGAAGCGGCTGCATCTTCCTGTCAGCCCTGGTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp GCTGTGTGGCAGGCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTaGACGCTGCCGCCGGAAGAGGCTGTGACAGAGACTCGAAACCAG +
Preference number: 1 (lower is better)
Translates to: AVWQACAECARRPAR*TLPPEEAVTETRNQ
Trigger: CTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGCCTGCCACACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp CCGCTCTCAGTGGGATGTGCCCGCGACCCTGGCGCTGGGAGGCAGTaGTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCC +
Preference number: 1 (lower is better)
Translates to: PLSVGCARDPGAGRQ*CREEWCPHGCHQTS
Trigger: GGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 90 bp GGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACG +
Preference number: 1 (lower is better)
Translates to: GRQVSCQSDTQAHAV*QACAECARRPARCT
Trigger: CGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 90 bp TGTGCCCGCGACCCTGGCGCTGGGAGGCAGTGCTGCAGAGAGGAGTaGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCCTCCGCA +
Preference number: 1 (lower is better)
Translates to: CARDPGAGRQCCREE*CPHGCHQTSSSPSA
Trigger: TGCGGAGGGTGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 90 bp CCCTCTGCCTTTGACTCTAAGATGGGGCAGGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTGGCGCTGGGAGGCAGTGCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: PSAFDSKMGQDPRSQ*DVPATLALGGSAAE
Trigger: CTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGGCAGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp CTCTCAGTGGGATGTGCCCGCGACCCTGGCGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCA +
Preference number: 1 (lower is better)
Translates to: LSVGCARDPGAGRQC*REEWCPHGCHQTSS
Trigger: TGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp CCTTTGACTCTAAGATGGGGCAGGACCCCCGCTCTCAGTGGGATGTaGCCGCGACCCTGGCGCTGGGAGGCAGTGCTGCAGAGAGGAGTG +
Preference number: 1 (lower is better)
Translates to: PLTLRWGRTPALSGM*PRPWRWEAVLQRGV
Trigger: CACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 90 bp AGGCCCCTGGAACTCGGGCTGAAGACAGTGCCTGTACAGCAGGAGTaGGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGG +
Preference number: 1 (lower is better)
Translates to: RPLELGLKTVPVQQE*GAEPRGHSQRGSWR
Trigger: CCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCTCACTCCTGCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp CCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCA +
Preference number: 1 (lower is better)
Translates to: PPHRTAQRLLPQAKD*GSSLCRKVSHTRVA
Trigger: TGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp AGGAGCGGCACGGCGGCGGCTGCCTTGCGCTTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTAC +
Preference number: 1 (lower is better)
Translates to: RSGTAAAALRFQLGP*SFEQYPTSDWSLGY
Trigger: GTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGTGCCGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp CACCTCTTCCCAAAGCCATCTGACTGGCTGAGTCCCAGGAGGGGCTaGTGTGCTGGGCTGGATGCAGATGGTGACATGGAGCAGAGCTGC +
Preference number: 1 (lower is better)
Translates to: HLFPKPSDWLSPRRG*CAGLDADGDMEQSC
Trigger: GCAGCTCTGCTCCATGTCACCATCTGCATCCAGCCCAGCACAGCAGCCCCTCCTGGGACTCAGCCAGTCAGATGGCTTTGGGAAGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 90 bp CAGAGCAGCTATGGGTGGGCAGTGCTGGTCCTTCACTACCCCGTTTaGCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGC +
Preference number: 1 (lower is better)
Translates to: QSSYGWAVLVLHYPV*PQPHFSHSRALLHG
Trigger: GCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAACGGGGTAGTGAAGGACCAGCACTGCCCACCCATAGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 90 bp CTCCCAGCCAGCTTCTGGTTAGGATCAGCATACGGCAGCAGCAGGTaGAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCT +
Preference number: 1 (lower is better)
Translates to: LPASFWLGSAYGSSR*SCVNSCVNTGGGFA
Trigger: AGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTATGCTGATCCTAACCAGAAGCTGGCTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 90 bp GATCAGCATACGGCAGCAGCAGGTGCAGCTGTGTCAACTCTTGCGTaGACACCGGGGGTGGGTTTGCTTTTTCCTGAGGGTCCCACCTTC +
Preference number: 1 (lower is better)
Translates to: DQHTAAAGAAVSTLA*TPGVGLLFPEGPTF
Trigger: GAAGGTGGGACCCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTATGCTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 90 bp ATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGG +
Preference number: 1 (lower is better)
Translates to: IRVRALRFSHSKRRF*NTLHKGTRYKQPPR
Trigger: CCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCACGCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp AGCACACAGGTAGAAACACTGAAAAATCAGGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAGAGGCAGACAGGTTTCGTGCCAGAG +
Preference number: 1 (lower is better)
Translates to: STQVETLKNQVTARL*QAVDPQRQTGFVPE
Trigger: CTCTGGCACGAAACCTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCACCTGATTTTTCAGTGTTTCTACCTGTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp GTGCTGCTGTTCAGAAGATCCTTCACCTCCTTTGAGGGGCTCCCTTaGAGGACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACA +
Preference number: 1 (lower is better)
Translates to: VLLFRRSFTSFEGLP*RTVRLWLLNSAVTT
Trigger: TGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTCCTGCAAGGGAGCCCCTCAAAGGAGGTGAAGGATCTTCTGAACAGCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 90 bp TCCTTCACCTCCTTTGAGGGGCTCCCTTGCAGGACTGTACGTCTCTaGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAAT +
Preference number: 1 (lower is better)
Translates to: SFTSFEGLPCRTVRL*LLNSAVTTWLTVAN
Trigger: ATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTCCTGCAAGGGAGCCCCTCAAAGGAGGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 90 bp AGGGGACCCAGCGGAAGGAGAGGGATTACCTGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAGCCCAAACAGCCTCAGATTCTATAT +
Preference number: 1 (lower is better)
Translates to: RGPSGRRGITCWREA*WKFKSKPKQPQILY
Trigger: ATATAGAATCTGAGGCTGTTTGGGCTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCAGGTAATCCCTCTCCTTCCGCTGGGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 90 bp CCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCATCATTaGGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATG +
Preference number: 1 (lower is better)
Translates to: PAPWRQVDHTGLFHH*GEYLLVSVSLIPDM
Trigger: CATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTCAATGATGGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 90 bp GGAATTTACTTTACAGCAAAGGCAGCATGGGAACAGGTACACACTTaGAATCCCTACGTTTCCCATCACCCAGAGGTGGCGAGTCTGATT +
Preference number: 1 (lower is better)
Translates to: GIYFTAKAAWEQVHT*NPYVSHHPEVASLI
Trigger: AATCAGACTCGCCACCTCTGGGTGATGGGAAACGTAGGGATTCCAAGTGTGTACCTGTTCCCATGCTGCCTTTGCTGTAAAGTAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 90 bp TCTAGGGCTCCAATCACATGTGATGGGCCTTGTGGCATTATTCCATaGCCACTTGTGCTTCATTTCTGTCTGTTTCTCCCTGTACATCAC +
Preference number: 1 (lower is better)
Translates to: SRAPITCDGPCGIIP*PLVLHFCLFLPVHH
Trigger: GTGATGTACAGGGAGAAACAGACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATGTGATTGGAGCCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 90 bp TTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAAATGGATTACGTTATGCCGAAACAG +
Preference number: 1 (lower is better)
Translates to: FQLGPCSFEQYPTSD*SLGYSEMDYVMPKQ
Trigger: CTGTTTCGGCATAACGTAATCCATTTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 90 bp TCTGCTACTGTCCGCAAAATACCAGAACACTCCGGAGCGTCCCTTTaGCACCAAGACAGCTTTTTCTACAGAATTTCAATTCTTGTGTTT +
Preference number: 1 (lower is better)
Translates to: SATVRKIPEHSGASL*HQDSFFYRISILVF
Trigger: AAACACAAGAATTGAAATTCTGTAGAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGAGTGTTCTGGTATTTTGCGGACAGTAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 90 bp TCTGACAGCACCATCTGTGGGCTTGATGAATGGCTTATTCACTATTaGCCACCTCCTATGGCATTGTTAAGGAATTTACTTTACAGCAAA +
Preference number: 1 (lower is better)
Translates to: SDSTICGLDEWLIHY*PPPMALLRNLLYSK
Trigger: TTTGCTGTAAAGTAAATTCCTTAACAATGCCATAGGAGGTGGGCAATAGTGAATAAGCCATTCATCAAGCCCACAGATGGTGCTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 90 bp TTTTCCAAACATGCTAGAACCACACCAAGAAAATCTCATCTGGATTaGCTCTCCTCTCACAATGCCTGTTGTTGTCTTTCTCCTTCATTG +
Preference number: 1 (lower is better)
Translates to: FSKHARTTPRKSHLD*LSSHNACCCLSPSL
Trigger: CAATGAAGGAGAAAGACAACAACAGGCATTGTGAGAGGAGAGCCAATCCAGATGAGATTTTCTTGGTGTGGTTCTAGCATGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 90 bp AGGTTGATCACACTGGACTCTTCCATCATTGAGGGGAGTATCTCTTaGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTGCTGT +
Preference number: 1 (lower is better)
Translates to: RLITLDSSIIEGSIS*FQFPLFQIWICLCC
Trigger: ACAGCAAAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTCAATGATGGAAGAGTCCAGTGTGATCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 90 bp TGTCGTTCTTATCTCTGTTCCTTGACGTCTGGGTTGCATAGTTTCTaGAGAGAAGTTGGCTTTCATTCTTATCTCTGTTCCTTGATAGTA +
Preference number: 1 (lower is better)
Translates to: CRSYLCSLTSGLHSF*REVGFHSYLCSLIV
Trigger: TACTATCAAGGAACAGAGATAAGAATGAAAGCCAACTTCTCTTCAGAAACTATGCAACCCAGACGTCAAGGAACAGAGATAAGAACGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 90 bp TTCCCTCGGAATATCTTAGTTTATTTACCTCCTTCATTGGCCATTTaGAGGCTCTTCTCCTTGAAAAATGAATCTTTACGCATTCTCCAA +
Preference number: 1 (lower is better)
Translates to: FPRNILVYLPPSLAI*RLFSLKNESLRILQ
Trigger: TTGGAGAATGCGTAAAGATTCATTTTTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGGAGGTAAATAAACTAAGATATTCCGAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
3UTR-3UTR GCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGGGCGGGGGATCCGCGTaGGCGCCCTCCGATTCTCGC +
Preference number: 2 (lower is better)
Translates to: ACAECARRPARCTLPPEEGGGSA*APSDSR
Trigger: GCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCC...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGCCCGGCAGGGAACCTaGCCCCACGGGGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTARQGT*PHGVQA
Trigger: GGCCTGGACCCCGTGGGGTCAGGTTCCCTGCCGGGC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGCCCGGCAGGGAACCTaGCCCCACGGGGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSARQGT*PHGVQA
Trigger: GGCCTGGACCCCGTGGGGTCAGGTTCCCTGCCGGGC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAAGCAGGGACCTGGCCTaGGGGCAAGGGAGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: SAGRSAILGWQRDASHHGSRDLA*GQGRSG
Trigger: GCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCT...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCGGCACGGCGGCGGCTaGCTTGCGCTTCCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTRHGGG*LALPAR
Trigger: CCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGTGCCG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: AVLQRGVVSARLSPDILIRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAG +
Preference number: 2 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTVTARL*QAVDPQ
Trigger: CTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCAC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGAAACCAGGGCCCCGTaGGAGAACACGGGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSETRAP*ENTGRH
Trigger: GTGCCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTC...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 2 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGAGCAGGGACCTGGCCTaGGGGCAAGGGAGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRSRDLA*GQGRSG
Trigger: GCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCT...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTGGCTCTGCCAGGCTGTaGATCCACAGAGGCAGACAG +
Preference number: 2 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAGSARL*IHRGRQ
Trigger: CTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCC...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTTCAGCCATACTCGGGTaGCAGCGTGACGCCAGTCAC +
Preference number: 2 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAASAILG*QRDASH
Trigger: GTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGA...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCCGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGG +
Preference number: 2 (lower is better)
Translates to: AVLQRGVVSARLSPDILIRRKRL*QRLETR
Trigger: CCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCG...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGG +
Preference number: 2 (lower is better)
Translates to: SAGRSAILGWQRDASHHGRRKRL*QRLETR
Trigger: CCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTTTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCACTCGGGTGGCAGCGTaGCGCCAGTCACCATGGAAA +
Preference number: 2 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSTRVAA*RQSPWK
Trigger: TTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGT...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGGCGGGGGATCCGCGTaGGCGCCCTCCGATTCTCGC +
Preference number: 2 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGGGGSA*APSDSR
Trigger: GCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAGGGCTGACAGGAAGATaGAGCCGCTTCCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: SAGRSAILGWQRDASHHGGLTGR*SRFQQG
Trigger: TCCCTGCTGGAAGCGGCTGCATCTTCCTGTCAGCCC...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGATGTGCCCGCGACCCTaGCGCTGGGAGGCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRMCPRP*RWEAVL
Trigger: CAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACAT...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 2 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTQAHAV*QACAEC
Trigger: ACACTCAGCACACGCCTGCCACACAGCGTGCGCTTG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGGCTCTGCCAGGCTGTaGATCCACAGAGGCAGACAG +
Preference number: 2 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSGSARL*IHRGRQ
Trigger: CTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCC...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGA +
Preference number: 2 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAARALLI*TISNLG
Trigger: TCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCG...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCGGCACGGCGGCGGCTaGCTTGCGCTTCCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: HVMGLVALFHAHLCFISVRHGGG*LALPAR
Trigger: CCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGTGCCG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTCCGCGACCCTGGCGCTaGGAGGCAGTGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCPRPWR*EAVLQR
Trigger: TCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGG...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTG +
Preference number: 2 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGDPRSQ*DVPATL
Trigger: CAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 2 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCAGCAGGGACCTGGCCTaGGGGCAAGGGAGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: HVMGLVALFHAHLCFISVSRDLA*GQGRSG
Trigger: GCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCT...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCTGCTGTCAGTGTTTCTaGCAGCACCATCTGTGGGCT +
Preference number: 2 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSCCQCF*QHHLWA
Trigger: AGCCCACAGATGGTGCTGTCAGAAACACTGACAGCA...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATGCGGCTCCTCTCTCTaGAGGAAGGTCAGCCATACT +
Preference number: 2 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSCGSSL*RKVSHT
Trigger: AGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CAA 90 bp GTTAGGATCAGCATACGGCAGCAGCAGGTGCAGCTGTGTCAACTCTaGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: VRISIRQQQVQLCQL*REHRGWVCFFLRVP
Trigger: TGGGACCCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTATGCTGATCCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGGGCAGACAGGTTTCGTaGCAGAGTGACACGCAAGCG +
Preference number: 2 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWGRQVS*QSDTQA
Trigger: CGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGCATCTAGGCAGGCTTaGTTGTCACCTCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSASRQA*LSPLPK
Trigger: TTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGATGC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp GGTACCATTCCTGGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTaGATCACACTGGACTCTTCCATCATTGAGGGGAGTATCTCTTGG +
Preference number: 2 (lower is better)
Translates to: GTIPGKGTSQPPGGR*ITLDSSIIEGSISW
Trigger: CCAAGAGATACTCCCCTCAATGATGGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCCAGGAATGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGCCCGGCAGGGAACCTaGCCCCACGGGGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: EGSISWFQFPLFQIWICLARQGT*PHGVQA
Trigger: GGCCTGGACCCCGTGGGGTCAGGTTCCCTGCCGGGC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGAGCCATCTGACTGGCTaGGTCCCAGGAGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVSHLTG*VPGGAA
Trigger: AGCAGCCCCTCCTGGGACTCAGCCAGTCAGATGGCT...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITSKRRF*NTLHKG
Trigger: TCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACT...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCTTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCA +
Preference number: 2 (lower is better)
Translates to: AVLQRGVVSARLSPDILIFQLGP*SFEQYP
Trigger: TGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGCTATGGGTGGGCAGTaGTGGTCCTTCACTACCCCG +
Preference number: 2 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGAMGGQ*WSFTTP
Trigger: CGGGGTAGTGAAGGACCAGCACTGCCCACCCATAGC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAGAAACCAGGGCCCCGTaGGAGAACACGGGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEETRAP*ENTGRH
Trigger: GTGCCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTC...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGGAAACCAGGGCCCCGTaGGAGAACACGGGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVETRAP*ENTGRH
Trigger: GTGCCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTC...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCAGGACTGTACGTCTCTaGCTGTTGAATTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSRTVRL*LLNSAV
Trigger: CACAGCTGAATTCAACAGCCAGAGACGTACAGTCCT...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTCCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGC +
Preference number: 2 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPPWNSG*RQCLYS
Trigger: GCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGG...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
3UTR-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCC +
Preference number: 2 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTEFRLQ*NGLRYA
Trigger: GGCATAACGTAATCCATTTCACTGTAGCCTAAACTC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCAATGATGAAACAAGGTaGTGTCAGAGGGACTTCAGG +
Preference number: 2 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSNDETR*CQRDFR
Trigger: CCTGAAGTCCCTCTGACATCACCTTGTTTCATCATT...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCA +
Preference number: 2 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSFQLGP*SFEQYP
Trigger: TGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCACATTCCCGAGCTCTaGTTCATGGCCCAGGGGGCC +
Preference number: 2 (lower is better)
Translates to: HVMGLVALFHAHLCFISVHIPEL*FMAQGA
Trigger: GGCCCCCTGGGCCATGAAGCAGAGCTCGGGAATGTG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGTATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAA +
Preference number: 2 (lower is better)
Translates to: FALSPTSHIPELCFMAQGYPTSD*SLGYSE
Trigger: TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATA...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGATATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAA +
Preference number: 2 (lower is better)
Translates to: SAGRSAILGWQRDASHHGYPTSD*SLGYSE
Trigger: TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATA...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTCCTTTGACTCTAAGATaGGGCAGGACCCCCGCTCTC +
Preference number: 2 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCPLTLR*GRTPAL
Trigger: GAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGG...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGCTGCTGTGCTGGGCTaGATGCAGATGGTGACATGG +
Preference number: 2 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGAAVLG*MQMVTW
Trigger: CCATGTCACCATCTGCATCCAGCCCAGCACAGCAGC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp ACCTCCTTTGAGGGGCTCCCTTGCAGGACTGTACGTCTCTGGCTGTaGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCA +
Preference number: 2 (lower is better)
Translates to: TSFEGLPCRTVRLWL*NSAVTTWLTVANEP
Trigger: TGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTCCTGCAAGGGAGCCCCTCAAAGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAG +
Preference number: 2 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEVTARL*QAVDPQ
Trigger: CTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCAC...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCTGCGGCTCCTCTCTCTaGAGGAAGGTCAGCCATACT +
Preference number: 2 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGCGSSL*RKVSHT
Trigger: AGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCA...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTATGTGCCCGCGACCCTaGCGCTGGGAGGCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSMCPRP*RWEAVL
Trigger: CAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACAT...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTATGGGTGGGCAGTGCTaGTCCTTCACTACCCCGTTT +
Preference number: 2 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCMGGQC*SFTTPF
Trigger: AAACGGGGTAGTGAAGGACCAGCACTGCCCACCCAT...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGTACGGCAGCAGCAGGTaGAGCTGTGTCAACTCTTGC +
Preference number: 2 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVYGSSR*SCVNSC
Trigger: GCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTA...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGCTCCCAGCCAGCTTCTaGTTAGGATCAGCATACGGC +
Preference number: 2 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVLPASF*LGSAYG
Trigger: GCCGTATGCTGATCCTAACCAGAAGCTGGCTGGGAG...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp TGCACTAGGATTTCTTCTGTGTCCAACACGCCAAGAGCCCTGAAATaGACTTCGGTTTACTCCATCCCTGTCTGTCCTGCTGGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: CTRISSVSNTPRALK*TSVYSIPVCPAGSV
Trigger: GACACTGCCAGCAGGACAGACAGGGATGGAGTAAACCGAAGTCAATTTCAGGGCTCTTGGCGTGTTGGACACAGAAGAAATCCTAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGTTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGAATGATGAAACAAGGTaGTGTCAGAGGGACTTCAGG +
Preference number: 2 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRNDETR*CQRDFR
Trigger: CCTGAAGTCCCTCTGACATCACCTTGTTTCATCATT...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGGAGCAGAGCTGCAGCTaGCCTGCTTGTGGACACAGA +
Preference number: 2 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVEQSCS*PACGHR
Trigger: TCTGTGTCCACAAGCAGGTCAGCTGCAGCTCTGCTC...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWSKRRF*NTLHKG
Trigger: TCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACT...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAGGCAGACAGGTTTCGTaGCAGAGTGACACGCAAGCG +
Preference number: 2 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEGRQVS*QSDTQA
Trigger: CGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCG +
Preference number: 2 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSAGRQC*REEWCP
Trigger: CGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGC...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCAAACCCGGAGCCTTTaGTTTAGGAAGCAAACTCAA +
Preference number: 2 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRQTRSL*FRKQTQ
Trigger: TTGAGTTTGCTTCCTAAAGCAAAGGCTCCGGGTTTG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGTCCGGAGCGTCCCTTTaGCACCAAGACAGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVSGASL*HQDSFF
Trigger: GAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGA...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTGCATCTAGGCAGGCTTaGTTGTCACCTCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCASRQA*LSPLPK
Trigger: TTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGATGC...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGAAACCAGGGCCCCGTaGGAGAACACGGGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLETRAP*ENTGRH
Trigger: GTGCCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCAGCTGACCTGCTTGTaGACACAGAGCAGCTATGGG +
Preference number: 2 (lower is better)
Translates to: HVMGLVALFHAHLCFISVQLTCL*TQSSYG
Trigger: CCCATAGCTGCTCTGTGTCCACAAGCAGGTCAGCTG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCACCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGC +
Preference number: 2 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPPWNSG*RQCLYS
Trigger: GCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGG...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: EGSISWFQFPLFQIWICLLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGTCGAGGTGATTGATTaGAACGGAGCTGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGVEVID*NGAEGC
Trigger: ACAACCTTCAGCTCCGTTTCAATCAATCACCTCGAC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGTTAGCTACCAAAGGCTaGACTAGGATTTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRLATKG*TRISSV
Trigger: CACAGAAGAAATCCTAGTGCAGCCTTTGGTAGCTAA...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGGCTCTGCCAGGCTGTaGATCCACAGAGGCAGACAG +
Preference number: 2 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSGSARL*IHRGRQ
Trigger: CTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCC...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTAGGACTGTACGTCTCTaGCTGTTGAATTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCRTVRL*LLNSAV
Trigger: CACAGCTGAATTCAACAGCCAGAGACGTACAGTCCT...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp AGGAATTTACTTTACAGCAAAGGCAGCATGGGAACAGGTACACACTaGGAATCCCTACGTTTCCCATCACCCAGAGGTGGCGAGTCTGAT +
Preference number: 2 (lower is better)
Translates to: RNLLYSKGSMGTGTH*ESLRFPSPRGGESD
Trigger: ATCAGACTCGCCACCTCTGGGTGATGGGAAACGTAGGGATTCCAAGTGTGTACCTGTTCCCATGCTGCCTTTGCTGTAAAGTAAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGGCAGACAGGTTTCGTaGCAGAGTGACACGCAAGCG +
Preference number: 2 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRGRQVS*QSDTQA
Trigger: CGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAG +
Preference number: 2 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLVTARL*QAVDPQ
Trigger: CTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCAC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCG +
Preference number: 2 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLAGRQC*REEWCP
Trigger: CGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAGAGCTGCAGCTGACCTaGTTGTGGACACAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPELQLT*LWTQSS
Trigger: GCTGCTCTGTGTCCACAAGCAGGTCAGCTGCAGCTC...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGCAGGGTGGCTGGTGCTaGTGTTCAGAAGATCCTTCA +
Preference number: 2 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVQGGWC*CSEDPS
Trigger: TGAAGGATCTTCTGAACAGCAGCACCAGCCACCCTG...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTTTTTCCCGTACTTACTaGCCTTGGTGGTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCFSRTY*PWWSLS
Trigger: AGAAAGTGACCACCAAGGCCAGTAAGTACGGGAAAA...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAGGCTCCAATGCTGAGTaGAGAACAGGCAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPGSNAE*RTGRQP
Trigger: TGGCTGCCTGCCTGTTCTCCACTCAGCATTGGAGCC...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp CTCCAATCACATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTaGTGCTTCATTTCTGTCTGTTTCTCCCTGTACATCACTGGGATC +
Preference number: 2 (lower is better)
Translates to: LQSHVMGLVALFHAH*CFISVCFSLYITGI
Trigger: GATCCCAGTGATGTACAGGGAGAAACAGACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATGTGATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCCGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGG +
Preference number: 2 (lower is better)
Translates to: AACFLKYLNGVYKILMSSRRKRL*QRLETR
Trigger: CCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCG...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR TCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTTGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPCWREA*WKFKSK
Trigger: CTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCA...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
3UTR-3UTR TCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAACTCGGGTGGCAGCGTaGCGCCAGTCACCATGGAAA +
Preference number: 2 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLTRVAA*RQSPWK
Trigger: TTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGT...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRPQAKD*GSSLCR
Trigger: CCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTTATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAA +
Preference number: 2 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPYPTSD*SLGYSE
Trigger: TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATA...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
3UTR-3UTR CCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGCGTACTTACTGGCCTTaGTGGTCACTTTCTATAGAG +
Preference number: 2 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVRTYWP*WSLSIE
Trigger: CTCTATAGAAAGTGACCACCAAGGCCAGTAAGTACG...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTCTCCCAGCCAGCTTCTaGTTAGGATCAGCATACGGC +
Preference number: 2 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSLPASF*LGSAYG
Trigger: GCCGTATGCTGATCCTAACCAGAAGCTGGCTGGGAG...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGA +
Preference number: 2 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRRALLI*TISNLG
Trigger: TCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTCCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: EGSISWFQFPLFQIWICLPQAKD*GSSLCR
Trigger: CCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGG...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACCGTACTTACTGGCCTTaGTGGTCACTTTCTATAGAG +
Preference number: 2 (lower is better)
Translates to: RISANSKSPRREKRIRRNRTYWP*WSLSIE
Trigger: CTCTATAGAAAGTGACCACCAAGGCCAGTAAGTACG...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
3UTR-3UTR CCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCTTTTCCCGTACTTACTaGCCTTGGTGGTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: HVMGLVALFHAHLCFISVFSRTY*PWWSLS
Trigger: AGAAAGTGACCACCAAGGCCAGTAAGTACGGGAAAA...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp GTCTGCTACTGTCCGCAAAATACCAGAACACTCCGGAGCGTCCCTTaGCCACCAAGACAGCTTTTTCTACAGAATTTCAATTCTTGTGTT +
Preference number: 2 (lower is better)
Translates to: VCYCPQNTRTLRSVP*PPRQLFLQNFNSCV
Trigger: AACACAAGAATTGAAATTCTGTAGAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGAGTGTTCTGGTATTTTGCGGACAGTAGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp GATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCATCTGTGGGCTaGATGAATGGCTTATTCACTATTGCCCACCTCCTATGGCATTGT +
Preference number: 2 (lower is better)
Translates to: DMSLLSVFLTAPSVG*MNGLFTIAHLLWHC
Trigger: ACAATGCCATAGGAGGTGGGCAATAGTGAATAAGCCATTCATCAAGCCCACAGATGGTGCTGTCAGAAACACTGACAGCAAAGACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTCAGAGGGACTTCAGGTaGCACCAAAATACCCCATCC +
Preference number: 2 (lower is better)
Translates to: EGSISWFQFPLFQIWICLQRDFR*HQNTPS
Trigger: GGATGGGGTATTTTGGTGTCACCTGAAGTCCCTCTG...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCGCAGGCTCTTCTCCTTaGAAAATGAATCTTTACGCA +
Preference number: 2 (lower is better)
Translates to: HVMGLVALFHAHLCFISVAGSSP*KMNLYA
Trigger: TGCGTAAAGATTCATTTTTCAAGGAGAAGAGCCTGC...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp GGGCTTGATGAATGGCTTATTCACTATTGCCCACCTCCTATGGCATaGTTAAGGAATTTACTTTACAGCAAAGGCAGCATGGGAACAGGT +
Preference number: 2 (lower is better)
Translates to: GLDEWLIHYCPPPMA*LRNLLYSKGSMGTG
Trigger: ACCTGTTCCCATGCTGCCTTTGCTGTAAAGTAAATTCCTTAACAATGCCATAGGAGGTGGGCAATAGTGAATAAGCCATTCATCAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACTTAAATGTCTGTCAGTaGAGAAACGCGTATCACGAA +
Preference number: 2 (lower is better)
Translates to: RISANSKSPRREKRIRRNLNVCQ*RNAYHE
Trigger: TTCGTGATACGCGTTTCTCCACTGACAGACATTTAA...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
3UTR-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRSKRRF*NTLHKG
Trigger: TCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACT...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR GCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCACAAACCCGGAGCCTTTaGTTTAGGAAGCAAACTCAA +
Preference number: 2 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPQTRSL*FRKQTQ
Trigger: TTGAGTTTGCTTCCTAAAGCAAAGGCTCCGGGTTTG...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGCTCTCCTCTCACAATaGCTGTTGTTGTCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: EGSISWFQFPLFQIWICLALLSQ*LLLSFS
Trigger: GGAGAAAGACAACAACAGGCATTGTGAGAGGAGAGC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: EGSISWFQFPLFQIWICLCWREA*WKFKSK
Trigger: CTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCA...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR TCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCC +
Preference number: 2 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSEFRLQ*NGLRYA
Trigger: GGCATAACGTAATCCATTTCACTGTAGCCTAAACTC...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR GCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCATTAGCTACCAAAGGCTaGACTAGGATTTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPLATKG*TRISSV
Trigger: CACAGAAGAAATCCTAGTGCAGCCTTTGGTAGCTAA...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTCAAGAAAATCTCATCTaGATTGGCTCTCCTCTCACA +
Preference number: 2 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSQENLI*IGSPLT
Trigger: TGTGAGAGGAGAGCCAATCCAGATGAGATTTTCTTG...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 90 bp TATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTaGCTGTCAGTGTTTCTGACAGCACCATCTGTGGGCTTGATGAAT +
Preference number: 2 (lower is better)
Translates to: YLLVSVSLIPDMDMS*LSVFLTAPSVGLMN
Trigger: ATTCATCAAGCCCACAGATGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 72 bp GGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGGGCCCCGTGGGAGAAC +
Preference number: 3 (lower is better)
Translates to: GPPGARCRRKRL*QRLETRAPWEN
Trigger: GTTCTCCCACGGGGCCCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCGGCAGCGTGCACCGGGCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CAA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTACGGCGGCGGCTGCCTaGCGCTTCCAGCTCGGGCCC +
Preference number: 3 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAATAAAA*RFQLGP
Trigger: GGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 72 bp CAGGCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTaGACGCTGCCGCCGGAAGAGGCTGTGACAGAGACT +
Preference number: 3 (lower is better)
Translates to: QACAECARRPAR*TLPPEEAVTET
Trigger: AGTCTCTGTCACAGCCTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 72 bp GGATGTGCCCGCGACCCTGGCGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAG +
Preference number: 3 (lower is better)
Translates to: GCARDPGAGRQC*REEWCPHGCHQ
Trigger: CTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp GAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGCCGCGTCTCTCCGCAA +
Preference number: 3 (lower is better)
Translates to: EPRGHSQRGSWR*CPRGRGRVSPQ
Trigger: TTGCGGAGAGACGCGGCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 72 bp GTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGTGCACGGAGGCCCGCC +
Preference number: 3 (lower is better)
Translates to: VSCQSDTQAHAV*QACAECARRPA
Trigger: GGCGGGCCTCCGTGCACACTCAGCACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 72 bp TTTGACTCTAAGATGGGGCAGGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTGGCGCTGGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: FDSKMGQDPRSQ*DVPATLALGGS
Trigger: ACTGCCTCCCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 72 bp CAGGGCCTGGAAGCCCCTCTGCCTTTGACTCTAAGATaGGGCAGGACCCCCGCTCTCAGTGGGATGTGCCCG +
Preference number: 3 (lower is better)
Translates to: QGLEAPLPLTLR*GRTPALSGMCP
Trigger: CGGGCACATCCCACTGAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGGCAGAGGGGCTTCCAGGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 72 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTaGTTCATGGCCCAGGGGGCCTCTCCTCCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: FALSPTSHIPEL*FMAQGASPPSQ
Trigger: CTGGCTGGGAGGAGAGGCCCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 72 bp GATACAAACAGCCCCCGAGGCCCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGCAGGAGTGAGGAGCGG +
Preference number: 3 (lower is better)
Translates to: DTNSPRGPWNSG*RQCLYSRSEER
Trigger: CCGCTCCTCACTCCTGCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGGGCCTCGGGGGCTGTTTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp GTGGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGTGTGGCAGGCGTGTGC +
Preference number: 3 (lower is better)
Translates to: VDPQRQTGFVPE*HASARCVAGVC
Trigger: GCACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp TGGCAGCGTGACGCCAGTCACCATGGAAACCAGGGCTaGCAGGAAGATGCAGCCGCTTCCAGCAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: WQRDASHHGNQG*QEDAAASSRDL
Trigger: CAGGTCCCTGCTGGAAGCGGCTGCATCTTCCTGTCAGCCCTGGTTTCCATGGTGACTGGCGTCACGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 72 bp GCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTaGCAGCGTGACGCCAGTCACCATGGAAACCAGGGC +
Preference number: 3 (lower is better)
Translates to: APLSAGRSAILG*QRDASHHGNQG
Trigger: GCCCTGGTTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp GAACTCGGGCTGAAGACAGTGCCTGTACAGCAGGAGTaGGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: ELGLKTVPVQQE*GAEPRGHSQRG
Trigger: GCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCTCACTCCTGCTGTACAGGCACTGTCTTCAGCCCGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp CTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTaGCGCCAGTCACCATGGAAACCAGGGCTGACAGGA +
Preference number: 3 (lower is better)
Translates to: LCRKVSHTRVAA*RQSPWKPGLTG
Trigger: TCCTGTCAGCCCTGGTTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 72 bp ACGGCGGCGGCTGCCTTGCGCTTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCAACCTCGGACTGGAGT +
Preference number: 3 (lower is better)
Translates to: TAAAALRFQLGP*SFEQYPTSDWS
Trigger: ACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp TTGCTTGTCACCTCTTCCCAAAGCCATCTGACTGGCTaGGTCCCAGGAGGGGCTGCTGTGCTGGGCTGGATG +
Preference number: 3 (lower is better)
Translates to: LLVTSSQSHLTG*VPGGAAVLGWM
Trigger: CATCCAGCCCAGCACAGCAGCCCCTCCTGGGACTCAGCCAGTCAGATGGCTTTGGGAAGAGGTGACAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp TATGGGTGGGCAGTGCTGGTCCTTCACTACCCCGTTTaGCCTCAGCCCCACTTCTCACATTCCCGAGCTCTG +
Preference number: 3 (lower is better)
Translates to: YGWAVLVLHYPV*PQPHFSHSRAL
Trigger: CAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAACGGGGTAGTGAAGGACCAGCACTGCCCACCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp AGCTTCTGGTTAGGATCAGCATACGGCAGCAGCAGGTaGAGCTGTGTCAACTCTTGCGTGAACACCGGGGGT +
Preference number: 3 (lower is better)
Translates to: SFWLGSAYGSSR*SCVNSCVNTGG
Trigger: ACCCCCGGTGTTCACGCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTATGCTGATCCTAACCAGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp GTGTGCTGCCCATGGGGAGGCAGTGCCCTAGAACATTaGACTGCCATCCTGATGGATGACATAGTGCCTCGA +
Preference number: 3 (lower is better)
Translates to: VCCPWGGSALEH*TAILMDDIVPR
Trigger: TCGAGGCACTATGTCATCCATCAGGATGGCAGTCCAATGTTCTAGGGCACTGCCTCCCCATGGGCAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCTTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 72 bp GGCTGCCTTGCGCTTCCAGCTCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGACTGGAGTTTAGGCTA +
Preference number: 3 (lower is better)
Translates to: GCLALPARALLI*TISNLGLEFRL
Trigger: TAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAAGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CAA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAACGGCGGCGGCTGCCTaGCGCTTCCAGCTCGGGCCC +
Preference number: 3 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLTAAAA*RFQLGP
Trigger: GGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 72 bp GTAGAAACACTGAAAAATCAGGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAGAGGCAGACAGGTTTC +
Preference number: 3 (lower is better)
Translates to: VETLKNQVTARL*QAVDPQRQTGF
Trigger: GAAACCTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCACCTGATTTTTCAGTGTTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR GCA 72 bp CTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTaGTTTTTCCTGAGGGTCCCACCTTCATTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: LCQLLREHRGWV*FFLRVPPSFLL
Trigger: CAGGAGAAATGAAGGTGGGACCCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp GTGCAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTaGGTTTGCTTTTTCCTGAGGGTCCCACCTTCATTT +
Preference number: 3 (lower is better)
Translates to: VQLCQLLREHRG*VCFFLRVPPSF
Trigger: AAATGAAGGTGGGACCCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp GTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATaGCTTACTGTGGCCAATGAACCAGGAGTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: VRLWLLNSAVTT*LTVANEPGVGL
Trigger: CAGGCCCACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 72 bp GAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATaGACCAGGAGTGGGCCTGCTGTATTCTGCGTCTGT +
Preference number: 3 (lower is better)
Translates to: EFSCDHMAYCGQ*TRSGPAVFCVC
Trigger: ACAGACGCAGAATACAGCAGGCCCACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp CATGGCTTACTGTGGCCAATGAACCAGGAGTGGGCCTaGTGTATTCTGCGTCTGTGCAGCAGATATAGCATC +
Preference number: 3 (lower is better)
Translates to: HGLLWPMNQEWA*CILRLCSRYSI
Trigger: GATGCTATATCTGCTGCACAGACGCAGAATACAGCAGGCCCACTCCTGGTTCATTGGCCACAGTAAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp TCCTTTGAGGGGCTCCCTTGCAGGACTGTACGTCTCTaGCTGTTGAATTCAGCTGTGACCACATGGCTTACT +
Preference number: 3 (lower is better)
Translates to: SFEGLPCRTVRL*LLNSAVTTWLT
Trigger: AGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTCCTGCAAGGGAGCCCCTCAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp TTTACAGCAAAGGCAGCATGGGAACAGGTACACACTTaGAATCCCTACGTTTCCCATCACCCAGAGGTGGCG +
Preference number: 3 (lower is better)
Translates to: FTAKAAWEQVHT*NPYVSHHPEVA
Trigger: CGCCACCTCTGGGTGATGGGAAACGTAGGGATTCCAAGTGTGTACCTGTTCCCATGCTGCCTTTGCTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCCGTACTTACTGGCCTaGGTGGTCACTTTCTATAGA +
Preference number: 3 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRPYLLA*VVTFYR
Trigger: TCTATAGAAAGTGACCACCAAGGCCAGTAAGTACGG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGATATGGATATGTCTTaGCTGTCAGTGTTTCTGACA +
Preference number: 3 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSDMDMS*LSVFLT
Trigger: TGTCAGAAACACTGACAGCAAAGACATATCCATATC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCTCTAGGCAGGCTTGCTaGTCACCTCTTCCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: HVMGLVALFHAHLCFISVSRQAC*SPLPKA
Trigger: GGCTTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGA...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCTCTCACAATGCCTGTaGTTGTCTTTCTCCTTCATT +
Preference number: 3 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRLSQCL*LSFSFI
Trigger: AATGAAGGAGAAAGACAACAACAGGCATTGTGAGAG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTCCCCCTGGAGGCAGGTaGATCACACTGGACTCTTCC +
Preference number: 3 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSPPGGR*ITLDSS
Trigger: GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGG...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: EGSISWFQFPLFQIWICLFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGAAGCCCCTCTGCCTTaGACTCTAAGATGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: RLFLNVCQWRNAYHESLREAPLP*TLRWGR
Trigger: CCTGCCCCATCTTAGAGTCAAAGGCAGAGGGGCTTC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CAA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR-3UTR CAA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTCAGTGCCCTAGAACATaGGACTGCCATCCTGATGGA +
Preference number: 3 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSQCPRT*DCHPDG
Trigger: TCCATCAGGATGGCAGTCCAATGTTCTAGGGCACTG...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 72 bp GCAGAGAAGTCGGCTGTCGTTCTTATCTCTGTTCCTTaGCGTCTGGGTTGCATAGTTTCTGAAGAGAAGTTG +
Preference number: 3 (lower is better)
Translates to: AEKSAVVLISVP*RLGCIVSEEKL
Trigger: CAACTTCTCTTCAGAAACTATGCAACCCAGACGTCAAGGAACAGAGATAAGAACGACAGCCGACTTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp GTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTaGTTCATTTCTGTCTGTTTCTCCCTGTACATCACT +
Preference number: 3 (lower is better)
Translates to: VMGLVALFHAHL*FISVCFSLYIT
Trigger: AGTGATGTACAGGGAGAAACAGACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp TATCTCTGTTCCTTGACGTCTGGGTTGCATAGTTTCTaGAGAGAAGTCGGCTGTCGTTCTTATCTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: YLCSLTSGLHSF*REVGCRSYLCS
Trigger: GGAACAGAGATAAGAACGACAGCCGACTTCTCTGCAGAAACTATGCAACCCAGACGTCAAGGAACAGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp AGTGTTTCTGACAGCACCATCTGTGGGCTTGATGAATaGCTTATTCACTATTGCCCACCTCCTATGGCATTG +
Preference number: 3 (lower is better)
Translates to: SVSDSTICGLDE*LIHYCPPPMAL
Trigger: CAATGCCATAGGAGGTGGGCAATAGTGAATAAGCCATTCATCAAGCCCACAGATGGTGCTGTCAGAAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCTCTCACAATGCCTGTaGTTGTCTTTCTCCTTCATT +
Preference number: 3 (lower is better)
Translates to: HVMGLVALFHAHLCFISVLSQCL*LSFSFI
Trigger: AATGAAGGAGAAAGACAACAACAGGCATTGTGAGAG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTCAGTGCCCTAGAACATaGGACTGCCATCCTGATGGA +
Preference number: 3 (lower is better)
Translates to: EGSISWFQFPLFQIWICLQCPRT*DCHPDG
Trigger: TCCATCAGGATGGCAGTCCAATGTTCTAGGGCACTG...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp GTCCGCAAAATACCAGAACACTCCGGAGCGTCCCTTTaGCACCAAGACAGCTTTTTCTACAGAATTTCAATT +
Preference number: 3 (lower is better)
Translates to: VRKIPEHSGASL*HQDSFFYRISI
Trigger: AATTGAAATTCTGTAGAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGAGTGTTCTGGTATTTTGCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp GGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAAATGGATTACGTTATG +
Preference number: 3 (lower is better)
Translates to: GPCSFEQYPTSD*SLGYSEMDYVM
Trigger: CATAACGTAATCCATTTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR CCA 72 bp CCAAACATGCTAGAACCACACCAAGAAAATCTCATCTaGATTGGCTCTCCTCTCACAATGCCTGTTGTTGTC +
Preference number: 3 (lower is better)
Translates to: PNMLEPHQENLI*IGSPLTMPVVV
Trigger: GACAACAACAGGCATTGTGAGAGGAGAGCCAATCCAGATGAGATTTTCTTGGTGTGGTTCTAGCATGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCATCCTTCATTGGCCATTaGCAGGCTCTTCTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPSFIGH*QALLLE
Trigger: TTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGGA...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR-3UTR CAA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTAAAATCTCATCTGGATaGGCTCTCCTCTCACAATGC +
Preference number: 3 (lower is better)
Translates to: EGSISWFQFPLFQIWICLKISSG*ALLSQC
Trigger: GCATTGTGAGAGGAGAGCCAATCCAGATGAGATTTT...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR TCA 72 bp ACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCCGAAACAGAAACATCA +
Preference number: 3 (lower is better)
Translates to: TISNLGLEFRLQ*NGLRYAETETS
Trigger: TGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
3UTR TCA 72 bp TATCTCTGTTCCTTGACGTCTGGGTTGCATAGTTTCTaGAGAGAAGTTGGCTTTCATTCTTATCTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: YLCSLTSGLHSF*REVGFHSYLCS
Trigger: GGAACAGAGATAAGAATGAAAGCCAACTTCTCTTCAGAAACTATGCAACCCAGACGTCAAGGAACAGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR GCA 72 bp ACCATCTGTGGGCTTGATGAATGGCTTATTCACTATTaGCCACCTCCTATGGCATTGTTAAGGAATTTACTT +
Preference number: 3 (lower is better)
Translates to: TICGLDEWLIHY*PPPMALLRNLL
Trigger: AAGTAAATTCCTTAACAATGCCATAGGAGGTGGGCAATAGTGAATAAGCCATTCATCAAGCCCACAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CCA 72 bp ACACTGGACTCTTCCATCATTGAGGGGAGTATCTCTTaGTTTCAGTTTCCCTTATTCCAGATATGGATATGT +
Preference number: 3 (lower is better)
Translates to: TLDSSIIEGSIS*FQFPLFQIWIC
Trigger: ACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTCAATGATGGAAGAGTCCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGCAGCCGAGCGTCGCTaGCCCCTGCGCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSAAERR*PLRWRQ
Trigger: CTGCCTCCAGCGCAGGGGCCAGCGACGCTCGGCTGC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR TCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGAGCAGGGACCTGGCCTaGGGGCAAGGGAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEESRDLA*GQGRSG
Trigger: GCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCCAAGGCCTCGGCCATaGCTCGCCGCACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSPRPRP*LAARCW
Trigger: CCAGCAACGTGCGGCGAGTCATGGCCGAGGCCTTGG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGATGTGCCCGCGACCCTaGCGCTGGGAGGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEMCPRP*RWEAVL
Trigger: CAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACAT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCGCAGAGCCCAGGGATaGGACAAGTGCGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSRRAQG*DKCEGP
Trigger: TGGCCCCTCGCACTTGTCGCATCCCTGGGCTCTGCG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCCGAGCTCTGCTTCATaGCCCAGGGGGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEPSSAS*PRGPLL
Trigger: GAGGAGAGGCCCCCTGGGCCATGAAGCAGAGCTCGG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSPWNSG*RQCLYS
Trigger: GCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGCAGGGACCTGGCCTaGGGGCAAGGGAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDASRDLA*GQGRSG
Trigger: GCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCT...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGGGCTCTGCCAGGCTGTaGATCCACAGAGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEGSARL*IHRGRQ
Trigger: CTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCC...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGGCTCTGCCAGGCTGTaGATCCACAGAGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSGSARL*IHRGRQ
Trigger: CTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTTCAGCCATACTCGGGTaGCAGCGTGACGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSSAILG*QRDASH
Trigger: GTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGA...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGTGCTGCAGAGAGGAGTaGTGTCCGCACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEECCREE*CPHGCH
Trigger: GTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCA...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCCAAGGCCTCGGCCATaGCTCGCCGCACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAPRPRP*LAARCW
Trigger: CCAGCAACGTGCGGCGAGTCATGGCCGAGGCCTTGG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGCCCGGCAGGGAACCTaGCCCCACGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLARQGT*PHGVQA
Trigger: GGCCTGGACCCCGTGGGGTCAGGTTCCCTGCCGGGC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGGTGTCAACTCTTGCGTaGACACCGGGGGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEVSTLA*TPGVGL
Trigger: CAAACCCACCCCCGGTGTTCACGCAAGAGTTGACAC...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGAGCGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEESAPGP*HVHVMV
Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGCT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTGGCGGGGGATCCGCGTaGGCGCCCTCCGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAGGGSA*APSDSR
Trigger: GCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCC...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGGCGGGGGATCCGCGTaGGCGCCCTCCGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTGGGSA*APSDSR
Trigger: GCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCCGCGACCCTGGCGCTaGGAGGCAGTGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAPRPWR*EAVLQR
Trigger: TCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCATGTGCCCGCGACCCTaGCGCTGGGAGGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAMCPRP*RWEAVL
Trigger: CAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACAT...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGACCTGCCCACGGGTCTaGCCCCCAGGCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTTCPRV*PPGHQG
Trigger: CCCCTGGTGGCCTGGGGGCCAGACCCGTGGGCAGGT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGACACAGAGCAGCTATaGGTGGGCAGTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSDTEQL*VGSAGP
Trigger: AGGACCAGCACTGCCCACCCATAGCTGCTCTGTGTC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGCGCTCCGTACATCTTaGAAGCCAGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSALRTS*KPAGWC
Trigger: ACACCATCCAGCTGGCTTTCAAGATGTACGGAGCGC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCCCCCAGGGCCGTCTTaGGGATGCAGGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAPPGPS*GCRTGH
Trigger: GTGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCTGAGTTTTCCGGGCTaGAATCGGCACAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEELSFPG*NRHRSR
Trigger: ACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCGCAGAGCCCAGGGATaGGACAAGTGCGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDARRAQG*DKCEGP
Trigger: TGGCCCCTCGCACTTGTCGCATCCCTGGGCTCTGCG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTCGGTGGGCAGCGCCTaGCGCCCCTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLSVGSA*RPFTAT
Trigger: GGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCACCGA...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGGCGGGGGATCCGCGTaGGCGCCCTCCGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSGGGSA*APSDSR
Trigger: GCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTCGGCACGGCGGCGGCTaGCTTGCGCTTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACRHGGG*LALPAR
Trigger: CCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGTGCCG...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSPQAKD*GSSLCR
Trigger: CCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTGCAGCCGAGCGTCGCTaGCCCCTGCGCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACAAERR*PLRWRQ
Trigger: CTGCCTCCAGCGCAGGGGCCAGCGACGCTCGGCTGC...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR CCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTTGGAGGACATCGTCATaGTCACAGGGATGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSWRTSS*SQGWRR
Trigger: TCGACGCCATCCCTGTGACCATGACGATGTCCTCCA...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGTTCCTGCGAGAATCCTaGTCTGACCGGGACACGAAC +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEFLRES*SDRDTN
Trigger: GTTCGTGTCCCGGTCAGACCAGGATTCTCGCAGGAA...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGATCTTGAAAGCCAGCTaGATGGTGTCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEILKAS*MVSRVR
Trigger: CCGGACCCTGGACACCATCCAGCTGGCTTTCAAGAT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCCCTTCTGCAGGGCGCTaGGGCGCAGCTCGTGCACGA +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTPSAGR*GAARAR
Trigger: TCGTGCACGAGCTGCGCCTCAGCGCCCTGCAGAAGG...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGAGTGAGGCGCGAGCGTaGGGATGGCCGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLSEARA*GWPPRW
Trigger: CCACCGAGGCGGCCATCCTCACGCTCGCGCCTCACT...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEERALLI*TISNLG
Trigger: TCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCTGAGGCGCAGCTCGTaGACGAAGGGGTTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTLRRSS*TKGFRP
Trigger: GGGGCGGAACCCCTTCGTGCACGAGCTGCGCCTCAG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGCCACCTGGGCCTTCTaGAGGGCGCTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLATWAF*RALRRS
Trigger: GCTGCGCCTCAGCGCCCTGCAGAAGGCCCAGGTGGC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR GCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACGGCACGGCGGCGGCTaGCTTGCGCTTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSRHGGG*LALPAR
Trigger: CCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGTGCCG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAAGRQC*REEWCP
Trigger: CGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGC...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGGCTCTCAGTGGGATGTaGCCGCGACCCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTALSGM*PRPWRW
Trigger: CCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGC...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGCTCTCAGTGGGATGTaGCCGCGACCCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITALSGM*PRPWRW
Trigger: CCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCAGGGTGGCTGGTGCTaGTGTTCAGAAGATCCTTCA +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEQGGWC*CSEDPS
Trigger: TGAAGGATCTTCTGAACAGCAGCACCAGCCACCCTG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTACATCCAACACTTACTaGAGGGTGGCTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSTSNTY*RVAGAA
Trigger: AGCAGCACCAGCCACCCTGCAGTAAGTGTTGGATGT...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTTTCACGGCCACCCGGTaGAAGCCGCCGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAFTATR*KPPANH
Trigger: GTGGTTCGCCGGCGGCTTCCACCGGGTGGCCGTGAA...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCCGCGACCCTGGCGCTaGGAGGCAGTGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTPRPWR*EAVLQR
Trigger: TCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGATGTGCCCGCGACCCTaGCGCTGGGAGGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTMCPRP*RWEAVL
Trigger: CAGCACTGCCTCCCAGCGCCAGGGTCGCGGGCACAT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAADPRSQ*DVPATL
Trigger: CAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTC...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAACCTGCCCACGGGTCTaGCCCCCAGGCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSTCPRV*PPGHQG
Trigger: CCCCTGGTGGCCTGGGGGCCAGACCCGTGGGCAGGT...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGACACTTACTGCAGGGTaGCTGGTGCTGCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEETLTAG*LVLLFR
Trigger: TCTGAACAGCAGCACCAGCCACCCTGCAGTAAGTGT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAAGTGAGGCGCGAGCGTaGGGATGGCCGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSSEARA*GWPPRW
Trigger: CCACCGAGGCGGCCATCCTCACGCTCGCGCCTCACT...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTAGTGAGGCGCGAGCGTaGGGATGGCCGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTSEARA*GWPPRW
Trigger: CCACCGAGGCGGCCATCCTCACGCTCGCGCCTCACT...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDARRKRL*QRLETR
Trigger: CCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCACTCGGGTGGCAGCGTaGCGCCAGTCACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDATRVAA*RQSPWK
Trigger: TTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGT...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCCAGGGATGCGACAAGTaGGAGGGGCCAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITQGCDK*EGPGQQ
Trigger: CTGCTGGCCTGGCCCCTCGCACTTGTCGCATCCCTG...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCCGCAGAGCCCAGGGATaGGACAAGTGCGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITRRAQG*DKCEGP
Trigger: TGGCCCCTCGCACTTGTCGCATCCCTGGGCTCTGCG...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACATCGGTGGGCAGCGCCTaGCGCCCCTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTSVGSA*RPFTAT
Trigger: GGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCACCGA...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGGGTCCACCTCGCCGCTaGCGCTCTCGTCGAACAGTG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTGPPRR*RSRRTV
Trigger: CACTGTTCGACGAGAGCGGCAGCGGCGAGGTGGACC...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCCACCTTCGCCGACGCTaGCGTCCTCTTGCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTHLRRR*RPLALR
Trigger: ACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTG...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCGGGCTGACAGGAAGATaGAGCCGCTTCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAGLTGR*SRFQQG
Trigger: TCCCTGCTGGAAGCGGCTGCATCTTCCTGTCAGCCC...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCTTCATCTGCAGACCTaGGGAAGGGAGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDALHLQT*GREVAW
Trigger: CCAGGCCACCTCCCTTCCGCAGGTCTGCAGATGAAG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAGGCCCATGCCCCACCTaGCCACGGGTCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTGPCPT*PRVWPP
Trigger: TGGGGGCCAGACCCGTGGGCAGGTGGGGCATGGGCC...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGGTCATGAGGGCCACCTaGGCCTTCTGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTVMRAT*AFCRAL
Trigger: CAGCGCCCTGCAGAAGGCCCAGGTGGCCCTCATGAC...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCTCGCCGCACGTTGCTaGCATACAGCGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAALAARC*HTARGS
Trigger: GGAACCCCGCGCTGTATGCCAGCAACGTGCGGCGAG...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGTTCCCCTTCTCCTCTTaGTCAATGGCTCGGAATAGG +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEFPFSS*SMARNR
Trigger: CCTATTCCGAGCCATTGACCAAGAGGAGAAGGGGAA...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTTTCCCCTTCTCCTCTTaGTCAATGGCTCGGAATAGG +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSFPFSS*SMARNR
Trigger: CCTATTCCGAGCCATTGACCAAGAGGAGAAGGGGAA...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGAAACCAGGGCCCCGTaGGAGAACACGGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIETRAP*ENTGRH
Trigger: GTGCCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGAAACCAGGGCCCCGTaGGAGAACACGGGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSETRAP*ENTGRH
Trigger: GTGCCGCCCCGTGTTCTCCCACGGGGCCCTGGTTTC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAQAHAV*QACAEC
Trigger: ACACTCAGCACACGCCTGCCACACAGCGTGCGCTTG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIDPRSQ*DVPATL
Trigger: CAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGAGCCATCTGACTGGCTaGGTCCCAGGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTSHLTG*VPGGAA
Trigger: AGCAGCCCCTCCTGGGACTCAGCCAGTCAGATGGCT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAGGTCCACCTCGCCGCTaGCGCTCTCGTCGAACAGTG +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGGPPRR*RSRRTV
Trigger: CACTGTTCGACGAGAGCGGCAGCGGCGAGGTGGACC...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTCACCTTCGCCGACGCTaGCGTCCTCTTGCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACHLRRR*RPLALR
Trigger: ACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTG...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGTACAGGTATTCCTCTaGGAAGGCAGGGTACATTTC +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSVQVFL*EGRVHF
Trigger: GAAATGTACCCTGCCTTCGCAGAGGAATACCTGTAC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCGGCAGACAGGTTTCGTaGCAGAGTGACACGCAAGCG +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAGRQVS*QSDTQA
Trigger: CGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTAGRQC*REEWCP
Trigger: CGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGC...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTGGCAACCCTCCCTCTaGCCTCACACCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITWQPSL*PHTPAG
Trigger: ACCTGCTGGGGTGTGAGGGCAGAGGGAGGGTTGCCA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCCAGGAGGGGCTGCTGTaGTGGGCTGGATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITQEGLL*WAGCRW
Trigger: CCATCTGCATCCAGCCCAGCACAGCAGCCCCTCCTG...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGCTCGCCGCACGTTGCTaGCATACAGCGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGLAARC*HTARGS
Trigger: GGAACCCCGCGCTGTATGCCAGCAACGTGCGGCGAG...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGCCGAGCTCTGCTTCATaGCCCAGGGGGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGPSSAS*PRGPLL
Trigger: GAGGAGAGGCCCCCTGGGCCATGAAGCAGAGCTCGG...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACACCTTCTGCAGGGCGCTaGGGCGCAGCTCGTGCACGA +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTPSAGR*GAARAR
Trigger: TCGTGCACGAGCTGCGCCTCAGCGCCCTGCAGAAGG...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR TCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCAGAGCGTCAGTGTCATaGGGGCCACCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITRASVS*GPPGPS
Trigger: AGAAGGCCCAGGTGGCCCTCATGACACTGACGCTCT...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR TCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGCGAGAATCCTGGTCTaGCCGGGACACGAACACAGG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITARILV*PGHEHR
Trigger: CCTGTGTTCGTGTCCCGGTCAGACCAGGATTCTCGC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCATCCTGGCTCTTTCTaGGTATCTGTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEHPGSF*VSVQIF
Trigger: AAAGATCTGGACAGATACTCAGAAAGAGCCAGGATG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCCCCCAGGGCCGTCTTaGGGATGCAGGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTPPGPS*GCRTGH
Trigger: GTGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCTTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGATTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGCAGGGACCTGGCCTaGGGGCAAGGGAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWSRDLA*GQGRSG
Trigger: GCCGCTCCTCCCTTGCCCTCAGGCCAGGTCCCTGCT...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEESKRRF*NTLHKG
Trigger: TCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAG +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGVTARL*QAVDPQ
Trigger: CTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCAC...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAG +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSVTARL*QAVDPQ
Trigger: CTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCAC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCAAACCCGGAGCCTTTaGTTTAGGAAGCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSQTRSL*FRKQTQ
Trigger: TTGAGTTTGCTTCCTAAAGCAAAGGCTCCGGGTTTG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACATTCACGGCCACCCGGTaGAAGCCGCCGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTFTATR*KPPANH
Trigger: GTGGTTCGCCGGCGGCTTCCACCGGGTGGCCGTGAA...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCGTAAAACCACAGGCTaGACGGGCGCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTRKTTG*TGAPGM
Trigger: CATCCCTGGAGCGCCCGTCCAGCCTGTGGTTTTACG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAAGAGCGTCAGTGTCATaGGGGCCACCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGRASVS*GPPGPS
Trigger: AGAAGGCCCAGGTGGCCCTCATGACACTGACGCTCT...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR TCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGCCAAGGCCTCGGCCATaGCTCGCCGCACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWPRPRP*LAARCW
Trigger: CCAGCAACGTGCGGCGAGTCATGGCCGAGGCCTTGG...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACACCCCCAGGGCCGTCTTaGGGATGCAGGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTPPGPS*GCRTGH
Trigger: GTGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGG...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCCTTCCGCCCAGCGTCTaGGTTTTCCGGGCTGAAATC +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITLPPSV*VFRAEI
Trigger: GATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAG...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTGCCCGGCAGGGAACCTaGCCCCACGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPARQGT*PHGVQA
Trigger: GGCCTGGACCCCGTGGGGTCAGGTTCCCTGCCGGGC...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGGTTTCGTGCCAGAGTaGCACGCAAGCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIGFVPE*HASARC
Trigger: ACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTACTCGGGTGGCAGCGTaGCGCCAGTCACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACTRVAA*RQSPWK
Trigger: TTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGT...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGGCAGGCTCTTCTCCTTaGAAAATGAATCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEAGSSP*KMNLYA
Trigger: TGCGTAAAGATTCATTTTTCAAGGAGAAGAGCCTGC...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCCCCCTGGAGGCAGGTTaGTCACACTGGACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTPLEAG*SHWTLP
Trigger: TGGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGG...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGGGCTGACAGGAAGATaGAGCCGCTTCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIGLTGR*SRFQQG
Trigger: TCCCTGCTGGAAGCGGCTGCATCTTCCTGTCAGCCC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTTTAGCTACCAAAGGCTaGACTAGGATTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GVQARRGIRVRALRFSHSLATKG*TRISSV
Trigger: CACAGAAGAAATCCTAGTGCAGCCTTTGGTAGCTAA...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCACATTCCCGAGCTCTaGTTCATGGCCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTHIPEL*FMAQGA
Trigger: GGCCCCCTGGGCCATGAAGCAGAGCTCGGGAATGTG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTGCTATGGGTGGGCAGTaGTGGTCCTTCACTACCCCG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACAMGGQ*WSFTTP
Trigger: CGGGGTAGTGAAGGACCAGCACTGCCCACCCATAGC...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACGTAAAACCACAGGCTaGACGGGCGCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGRKTTG*TGAPGM
Trigger: CATCCCTGGAGCGCCCGTCCAGCCTGTGGTTTTACG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTTCAGCCATACTCGGGTaGCAGCGTGACGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACSAILG*QRDASH
Trigger: GTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGA...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCTGCTGCAGAGAGGAGTaGTGTCCGCACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSCCREE*CPHGCH
Trigger: GTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCA...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGCCGCGACCCTGGCGCTaGGAGGCAGTGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWPRPWR*EAVLQR
Trigger: TCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGG...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCCGCGACCCTGGCGCTaGGAGGCAGTGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRPRPWR*EAVLQR
Trigger: TCTCTGCAGCACTGCCTCCCAGCGCCAGGGTCGCGG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCCTTTGACTCTAAGATaGGGCAGGACCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAPLTLR*GRTPAL
Trigger: GAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGG...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGGCTCCAATGCTGAGTaGAGAACAGGCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTGSNAE*RTGRQP
Trigger: TGGCTGCCTGCCTGTTCTCCACTCAGCATTGGAGCC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGCTGCTGTGCTGGGCTaGATGCAGATGGTGACATGG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITAAVLG*MQMVTW
Trigger: CCATGTCACCATCTGCATCCAGCCCAGCACAGCAGC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGCTGCTGTGCTGGGCTaGATGCAGATGGTGACATGG +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTAAVLG*MQMVTW
Trigger: CCATGTCACCATCTGCATCCAGCCCAGCACAGCAGC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCCCCCAGGGCCGTCTTaGGGATGCAGGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRPPGPS*GCRTGH
Trigger: GTGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGGGATTGGCGCAGGTaGGGTCTCTGCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLWDWRR*GLCTAF
Trigger: GAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCCA...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTTGGGATTGGCGCAGGTaGGGTCTCTGCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACWDWRR*GLCTAF
Trigger: GAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCCA...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCTGAGTTTTCCGGGCTaGAATCGGCACAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAALSFPG*NRHRSR
Trigger: ACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAG...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCCTTCCGCCCAGCGTCTaGGTTTTCCGGGCTGAAATC +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSLPPSV*VFRAEI
Trigger: GATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAG...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACTTCCGCCCAGCGTCTaGGTTTTCCGGGCTGAAATC +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGLPPSV*VFRAEI
Trigger: GATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTPWNSG*RQCLYS
Trigger: GCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSRRKRL*QRLETR
Trigger: CCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCGAGCAGAGCTGCAGCTaGCCTGCTTGTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSEQSCS*PACGHR
Trigger: TCTGTGTCCACAAGCAGGTCAGCTGCAGCTCTGCTC...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTGCTGGATGCAGATGGTaGCATGGAGCAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACAGCRW*HGAELQ
Trigger: CTGCAGCTCTGCTCCATGTCACCATCTGCATCCAGC...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGCGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILISAPGP*HVHVMV
Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGCT...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCCTAATCCAGCTTCTTaGGAACAGGCTTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTPNPAS*EQASAQ
Trigger: CTGGGCGGAAGCCTGTTCGCAAGAAGCTGGATTAGG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCTGCGGCTCCTCTCTCTaGAGGAAGGTCAGCCATACT +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTCGSSL*RKVSHT
Trigger: AGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCA...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTGCGGCTCCTCTCTCTaGAGGAAGGTCAGCCATACT +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTCGSSL*RKVSHT
Trigger: AGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCCCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITPQAKD*GSSLCR
Trigger: CCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGG...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCCACCGGGGGTGGGTTTaGTTTTTCCTGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSHRGWV*FFLRVP
Trigger: TGGGACCCTCAGGAAAAAGCAAACCCACCCCCGGTG...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGAGCTGCAGCTGACCTaGTTGTGGACACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLELQLT*LWTQSS
Trigger: GCTGCTCTGTGTCCACAAGCAGGTCAGCTGCAGCTC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCTGCAGGGTGGCTGGTaGTGCTGTTCAGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTLQGGW*CCSEDP
Trigger: AGGATCTTCTGAACAGCAGCACCAGCCACCCTGCAG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCCCCATGGGGAGGCAGTaGCCTAGAACATTGGACTGC +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIPMGRQ*PRTLDC
Trigger: GCAGTCCAATGTTCTAGGGCACTGCCTCCCCATGGG...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTTTCCTGCGAGAATCCTaGTCTGACCGGGACACGAAC +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAFLRES*SDRDTN
Trigger: GTTCGTGTCCCGGTCAGACCAGGATTCTCGCAGGAA...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTTCCTGCGAGAATCCTaGTCTGACCGGGACACGAAC +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITFLRES*SDRDTN
Trigger: GTTCGTGTCCCGGTCAGACCAGGATTCTCGCAGGAA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTTCCTGCGAGAATCCTaGTCTGACCGGGACACGAAC +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTFLRES*SDRDTN
Trigger: GTTCGTGTCCCGGTCAGACCAGGATTCTCGCAGGAA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCTCGCCGCACGTTGCTaGCATACAGCGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRLAARC*HTARGS
Trigger: GGAACCCCGCGCTGTATGCCAGCAACGTGCGGCGAG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTTGCTGCAGAGAGGAGTaGTGTCCGCACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTCCREE*CPHGCH
Trigger: GTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCA...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTCCTTTGACTCTAAGATaGGGCAGGACCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACPLTLR*GRTPAL
Trigger: GAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGG...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACCTTTGACTCTAAGATaGGGCAGGACCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGPLTLR*GRTPAL
Trigger: GAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCCTCCCAGCCAGCTTCTaGTTAGGATCAGCATACGGC +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTLPASF*LGSAYG
Trigger: GCCGTATGCTGATCCTAACCAGAAGCTGGCTGGGAG...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCTCCCAGCCAGCTTCTaGTTAGGATCAGCATACGGC +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTLPASF*LGSAYG
Trigger: GCCGTATGCTGATCCTAACCAGAAGCTGGCTGGGAG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGATGGGTGGGCAGTGCTaGTCCTTCACTACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTMGGQC*SFTTPF
Trigger: AAACGGGGTAGTGAAGGACCAGCACTGCCCACCCAT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGAGTGAGGCGCGAGCGTaGGGATGGCCGCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVSEARA*GWPPRW
Trigger: CCACCGAGGCGGCCATCCTCACGCTCGCGCCTCACT...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGAAACTGACACAGCGTaGGCCACAGGATTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLETDTA*ATGFPA
Trigger: CGCTGGAAATCCTGTGGCTCACGCTGTGTCAGTTTC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGAAACTGACACAGCGTaGGCCACAGGATTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIETDTA*ATGFPA
Trigger: CGCTGGAAATCCTGTGGCTCACGCTGTGTCAGTTTC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCCCAAGGCCTCGGCCATaGCTCGCCGCACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAPRPRP*LAARCW
Trigger: CCAGCAACGTGCGGCGAGTCATGGCCGAGGCCTTGG...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGGCCCGGCAGGGAACCTaGCCCCACGGGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVARQGT*PHGVQA
Trigger: GGCCTGGACCCCGTGGGGTCAGGTTCCCTGCCGGGC...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTRALLI*TISNLG
Trigger: TCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGAGCCATCTGACTGGCTaGGTCCCAGGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRSHLTG*VPGGAA
Trigger: AGCAGCCCCTCCTGGGACTCAGCCAGTCAGATGGCT...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTCACAGGGCCGGGGGCTaGTCGGGTTCCTTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCHRAGG*SGSFSA
Trigger: TGCGGAGAAGGAACCCGAGCAGCCCCCGGCCCTGTG...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGCTCTCAGTGGGATGTaGCCGCGACCCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGALSGM*PRPWRW
Trigger: CCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACGGCCCATGCCCCACCTaGCCACGGGTCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNGPCPT*PRVWPP
Trigger: TGGGGGCCAGACCCGTGGGCAGGTGGGGCATGGGCC...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTACGGCAGCAGCAGGTaGAGCTGTGTCAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLYGSSR*SCVNSC
Trigger: GCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTA...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCAGGGTGGCTGGTGCTaGTGTTCAGAAGATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAQGGWC*CSEDPS
Trigger: TGAAGGATCTTCTGAACAGCAGCACCAGCCACCCTG...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTCATGGTCACAGGGATaGCGTCGAAGTAGGACGAGT +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITSWSQG*RRSRTS
Trigger: ACTCGTCCTACTTCGACGCCATCCCTGTGACCATGA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTCATGGTCACAGGGATaGCGTCGAAGTAGGACGAGT +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTSWSQG*RRSRTS
Trigger: ACTCGTCCTACTTCGACGCCATCCCTGTGACCATGA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTTGGAGGACATCGTCATaGTCACAGGGATGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACWRTSS*SQGWRR
Trigger: TCGACGCCATCCCTGTGACCATGACGATGTCCTCCA...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGGCCCCGCACGAGCCTaGCAAATTCTAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLGPARA*QILKGK
Trigger: CTTGCCTTTTAGAATTTGCCAGGCTCGTGCGGGGCC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTATCTTGAAAGCCAGCTaGATGGTGTCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACILKAS*MVSRVR
Trigger: CCGGACCCTGGACACCATCCAGCTGGCTTTCAAGAT...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGGCTCCAATGCTGAGTaGAGAACAGGCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTGSNAE*RTGRQP
Trigger: TGGCTGCCTGCCTGTTCTCCACTCAGCATTGGAGCC...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGATGGGTGGGCAGTGCTaGTCCTTCACTACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLMGGQC*SFTTPF
Trigger: AAACGGGGTAGTGAAGGACCAGCACTGCCCACCCAT...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTCCACATGGCTTACTGTaGCCAATGAACCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAPHGLL*PMNQEW
Trigger: CCACTCCTGGTTCATTGGCCACAGTAAGCCATGTGG...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGCGCTCCGTACATCTTaGAAGCCAGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSALRTS*KPAGWC
Trigger: ACACCATCCAGCTGGCTTTCAAGATGTACGGAGCGC...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGTCGGTGGGCAGCGCCTaGCGCCCCTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVSVGSA*RPFTAT
Trigger: GGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCACCGA...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCGGTCCACCTCGCCGCTaGCGCTCTCGTCGAACAGTG +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAGPPRR*RSRRTV
Trigger: CACTGTTCGACGAGAGCGGCAGCGGCGAGGTGGACC...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAACGCTGCCGTCCTCTTaGGCTCCGTACATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGTLPSS*APYILK
Trigger: TTTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGT...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTCACCTTCGCCGACGCTaGCGTCCTCTTGCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCHLRRR*RPLALR
Trigger: ACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTG...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTTGCGGCTCCTCTCTCTaGAGGAAGGTCAGCCATACT +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTCGSSL*RKVSHT
Trigger: AGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCA...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSPQAKD*GSSLCR
Trigger: CCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCCTTCATTGGCCATTTaGAGGCTCTTCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAPSLAI*RLFSLK
Trigger: TTTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAAGCTGTGTCAACTCTTaGGTGAACACCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTSCVNS*VNTGGG
Trigger: CCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCT...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACATCCAACACTTACTaGAGGGTGGCTGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILITSNTY*RVAGAA
Trigger: AGCAGCACCAGCCACCCTGCAGTAAGTGTTGGATGT...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGGGTTGCATAGTTTCTaGAGAGAAGTCGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTGLHSF*REVGCR
Trigger: ACGACAGCCGACTTCTCTGCAGAAACTATGCAACCC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCTCATGGTCACAGGGATaGCGTCGAAGTAGGACGAGT +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILISWSQG*RRSRTS
Trigger: ACTCGTCCTACTTCGACGCCATCCCTGTGACCATGA...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGGCCCCGCACGAGCCTaGCAAATTCTAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTGPARA*QILKGK
Trigger: CTTGCCTTTTAGAATTTGCCAGGCTCGTGCGGGGCC...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTCTCCTCTTGGTCAATaGCTCGGAATAGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITSPLGQ*LGIGRS
Trigger: TGACCGACCTATTCCGAGCCATTGACCAAGAGGAGA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTTCCCCTTCTCCTCTTaGTCAATGGCTCGGAATAGG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTFPFSS*SMARNR
Trigger: CCTATTCCGAGCCATTGACCAAGAGGAGAAGGGGAA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVDPRSQ*DVPATL
Trigger: CAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTC...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGATTGTGCTTGAAGGATaGGTTTCTAATTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: ACAECARRPARCTLPPEEIVLEG*VSNSVI
Trigger: TATGACAGAATTAGAAACCCATCCTTCAAGCACAAT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGATGCAGATGGTGACATaGAGCAGAGCTGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLMQMVT*SRAAAD
Trigger: GTCAGCTGCAGCTCTGCTCCATGTCACCATCTGCAT...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCCAAAGCCATCTGACTaGCTGAGTCCCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRPKPSD*LSPRRG
Trigger: GCCCCTCCTGGGACTCAGCCAGTCAGATGGCTTTGG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGACACTTACTGCAGGGTaGCTGGTGCTGCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGTLTAG*LVLLFR
Trigger: TCTGAACAGCAGCACCAGCCACCCTGCAGTAAGTGT...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 72 bp CCTGGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTaGATCACACTGGACTCTTCCATCATTGAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PGKGTSQPPGGR*ITLDSSIIEGS
Trigger: ACTCCCCTCAATGATGGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGACTGCGCCCGTCTCTTaGTTTCTTCTACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTTAPVS*FLLLFS
Trigger: GGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCACTGCGCCCGTCTCTTaGTTTCTTCTACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITTAPVS*FLLLFS
Trigger: GGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGT...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGGAAGTCAGCGAATGTaGTCTTCCCCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLGSQRM*SSPSPL
Trigger: AAGAGGAGAAGGGGAAGATCACATTCGCTGACTTCC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGTGGGATTGGCGCAGGTaGGGTCTCTGCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRWDWRR*GLCTAF
Trigger: GAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCCA...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCAGAGGGACTTCAGGTaGCACCAAAATACCCCATCC +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTQRDFR*HQNTPS
Trigger: GGATGGGGTATTTTGGTGTCACCTGAAGTCCCTCTG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGTCGAGGTGATTGATTaGAACGGAGCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITVEVID*NGAEGC
Trigger: ACAACCTTCAGCTCCGTTTCAATCAATCACCTCGAC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCTTCCCAAAGCCATCTaGCTGGCTGAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRLPKAI*LAESQE
Trigger: CTCCTGGGACTCAGCCAGTCAGATGGCTTTGGGAAG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCTGAGGCGCAGCTCGTaGACGAAGGGGTTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVLRRSS*TKGFRP
Trigger: GGGGCGGAACCCCTTCGTGCACGAGCTGCGCCTCAG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475622.5
CDS-3UTR GCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAGCCACCTGGGCCTTCTaGAGGGCGCTGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEATWAF*RALRRS
Trigger: GCTGCGCCTCAGCGCCCTGCAGAAGGCCCAGGTGGC...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGATCGGGATGTCTCTaGTCTCTGCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIRSGCL*SLPSSR
Trigger: TCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCT...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGAGATCGGGATGTCTCTaGTCTCTGCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLRSGCL*SLPSSR
Trigger: TCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCT...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCCACTTTCCGTTGGACTaGGCCCGTCTCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIHFPLD*ARLLIS
Trigger: AGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTG...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGGCAGGGTACATTTCTaGAAACCTGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIGRVHF*KPVEVS
Trigger: GCTGACTTCCACAGGTTTGCAGAAATGTACCCTGCC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGGCAGGGTACATTTCTaGAAACCTGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLGRVHF*KPVEVS
Trigger: GCTGACTTCCACAGGTTTGCAGAAATGTACCCTGCC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACACCTAATCCAGCTTCTTaGGAACAGGCTTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTPNPAS*EQASAQ
Trigger: CTGGGCGGAAGCCTGTTCGCAAGAAGCTGGATTAGG...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCA +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITFQLGP*SFEQYP
Trigger: TGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCA +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTFQLGP*SFEQYP
Trigger: TGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCGCTCTCAGTGGGATGTaGCCGCGACCCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVALSGM*PRPWRW
Trigger: CCAGCGCCAGGGTCGCGGGCACATCCCACTGAGAGC...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGCATCTAGGCAGGCTTaGTTGTCACCTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLASRQA*LSPLPK
Trigger: TTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGATGC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCCTGCCTTCATCACGATaGAGGACATCGTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILILPSSR*RTSSWS
Trigger: TGACCATGACGATGTCCTCCATCGTGATGAAGGCAG...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAATCTTGAAAGCCAGCTaGATGGTGTCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTILKAS*MVSRVR
Trigger: CCGGACCCTGGACACCATCCAGCTGGCTTTCAAGAT...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGATCTCCTCTTGGTCAATaGCTCGGAATAGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGSPLGQ*LGIGRS
Trigger: TGACCGACCTATTCCGAGCCATTGACCAAGAGGAGA...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACGACCCCCGCTCTCAGTaGGATGTGCCCGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNDPRSQ*DVPATL
Trigger: CAGGGTCGCGGGCACATCCCACTGAGAGCGGGGGTC...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCACATGGCTTACTGTaGCCAATGAACCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSPHGLL*PMNQEW
Trigger: CCACTCCTGGTTCATTGGCCACAGTAAGCCATGTGG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 72 bp GAGGGGCTCCCTTGCAGGACTGTACGTCTCTGGCTGTaGAATTCAGCTGTGACCACATGGCTTACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: EGLPCRTVRLWL*NSAVTTWLTVA
Trigger: GGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTCCTGCAAGGGAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGACCACATGGTGCGCATaGTGGCCTTCAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWTTWCA*WPSAGS
Trigger: ACTTCCTGCTGAAGGCCATCATGCGCACCATGTGGT...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTCTTGCCACGTCCATGTaGTGGTGTCCAGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACLATSM*WCPVYL
Trigger: CAAATAAACTGGACACCATCACATGGACGTGGCAAG...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCCTTTCGAAATGTGTCTaGTCCGGGTACAGGTATTCC +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSLSKCV*SGYRYS
Trigger: GGAATACCTGTACCCGGATCAGACACATTTCGAAAG...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCACTCGGGTGGCAGCGTaGCGCCAGTCACCATGGAAA +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEATRVAA*RQSPWK
Trigger: TTTCCATGGTGACTGGCGTCACGCTGCCACCCGAGT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTAATGATGAAACAAGGTaGTGTCAGAGGGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAANDETR*CQRDFR
Trigger: CCTGAAGTCCCTCTGACATCACCTTGTTTCATCATT...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGAATGATGAAACAAGGTaGTGTCAGAGGGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTNDETR*CQRDFR
Trigger: CCTGAAGTCCCTCTGACATCACCTTGTTTCATCATT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGTCGAGGTGATTGATTaGAACGGAGCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIVEVID*NGAEGC
Trigger: ACAACCTTCAGCTCCGTTTCAATCAATCACCTCGAC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGATGTCTCTGCTCTCTaGCTTCATCACGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTDVSAL*LHHDGG
Trigger: TCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATC...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAACGCTGCCGTCCTCTTaGGCTCCGTACATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTTLPSS*APYILK
Trigger: TTTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGT...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGGCAGGGTACATTTCTaGAAACCTGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSGRVHF*KPVEVS
Trigger: GCTGACTTCCACAGGTTTGCAGAAATGTACCCTGCC...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAGTACAGGTATTCCTCTaGGAAGGCAGGGTACATTTC +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGVQVFL*EGRVHF
Trigger: GAAATGTACCCTGCCTTCGCAGAGGAATACCTGTAC...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGGTACAGGTATTCCTCTaGGAAGGCAGGGTACATTTC +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGVQVFL*EGRVHF
Trigger: GAAATGTACCCTGCCTTCGCAGAGGAATACCTGTAC...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCA +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLFQLGP*SFEQYP
Trigger: TGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCGGCACGGCGGCGGCTaGCTTGCGCTTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRRHGGG*LALPAR
Trigger: CCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGTGCCG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGCCACAAGCAAAAGACTaGGGCTCCTCTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWPQAKD*GSSLCR
Trigger: CCTGCAGAGAGAGGAGCCGCAGTCTTTTGCTTGTGG...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGCCTTCATTGGCCATTTaGAGGCTCTTCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTPSLAI*RLFSLK
Trigger: TTTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGG...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGTACGGCAGCAGCAGGTaGAGCTGTGTCAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRYGSSR*SCVNSC
Trigger: GCAAGAGTTGACACAGCTGCACCTGCTGCTGCCGTA...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGGGCCCCGCACGAGCCTaGCAAATTCTAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRGPARA*QILKGK
Trigger: CTTGCCTTTTAGAATTTGCCAGGCTCGTGCGGGGCC...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGCTCCTCCCTTCATCCTaGCTCTTTCTGAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGLLPSS*LFLSIC
Trigger: ACAGATACTCAGAAAGAGCCAGGATGAAGGGAGGAG...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTCAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCQAHAV*QACAEC
Trigger: ACACTCAGCACACGCCTGCCACACAGCGTGCGCTTG...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTYPTSD*SLGYSE
Trigger: TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTTTTTCCCGTACTTACTaGCCTTGGTGGTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAFSRTY*PWWSLS
Trigger: AGAAAGTGACCACCAAGGCCAGTAAGTACGGGAAAA...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCTTAAATGTCTGTCAGTaGAGAAACGCGTATCACGAA +
Preference number: 4 (lower is better)
Translates to: AAPLSAGRSAILGWQRDALNVCQ*RNAYHE
Trigger: TTCGTGATACGCGTTTCTCCACTGACAGACATTTAA...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCGGAAGGGAGGTGGCCTaGGTCCCTTCCCTCGGAATA +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAGREVA*VPSLGI
Trigger: TATTCCGAGGGAAGGGACCCAGGCCACCTCCCTTCC...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGCGTGAACACCGGGGGTaGGTTTGCTTTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWREHRG*VCFFLR
Trigger: CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACG...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCCCAAAGCCATCTGACTaGCTGAGTCCCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAPKPSD*LSPRRG
Trigger: GCCCCTCCTGGGACTCAGCCAGTCAGATGGCTTTGG...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTAGGACTGTACGTCTCTaGCTGTTGAATTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACRTVRL*LLNSAV
Trigger: CACAGCTGAATTCAACAGCCAGAGACGTACAGTCCT...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGCATCCTGGCTCTTTCTaGGTATCTGTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLHPGSF*VSVQIF
Trigger: AAAGATCTGGACAGATACTCAGAAAGAGCCAGGATG...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGCATCCTGGCTCTTTCTaGGTATCTGTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGHPGSF*VSVQIF
Trigger: AAAGATCTGGACAGATACTCAGAAAGAGCCAGGATG...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCTTTCGAAATGTGTCTaGTCCGGGTACAGGTATTCC +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTLSKCV*SGYRYS
Trigger: GGAATACCTGTACCCGGATCAGACACATTTCGAAAG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCTGGGATTGGCGCAGGTaGGGTCTCTGCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAWDWRR*GLCTAF
Trigger: GAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCCA...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCTGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILICWREA*WKFKSK
Trigger: CTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCA...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCC +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTEFRLQ*NGLRYA
Trigger: GGCATAACGTAATCCATTTCACTGTAGCCTAAACTC...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRRALLI*TISNLG
Trigger: TCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCAAAAACAAGTCGAGGTaGTTGATTGAAACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTKNKSR*LIETEL
Trigger: CAGCTCCGTTTCAATCAATCACCTCGACTTGTTTTT...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGAAAAACAAGTCGAGGTaGTTGATTGAAACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTKNKSR*LIETEL
Trigger: CAGCTCCGTTTCAATCAATCACCTCGACTTGTTTTT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGCAGGCTCTTCTCCTTaGAAAATGAATCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITAGSSP*KMNLYA
Trigger: TGCGTAAAGATTCATTTTTCAAGGAGAAGAGCCTGC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTATCCTTCACCTCCTTTaGGGGGCTCCCTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCILHLL*GAPLQD
Trigger: GTCCTGCAAGGGAGCCCCTCAAAGGAGGTGAAGGAT...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGGGGTTGCATAGTTTCTaGAGAGAAGTTGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTGLHSF*REVGFH
Trigger: ATGAAAGCCAACTTCTCTTCAGAAACTATGCAACCC...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACACACTTTCCGTTGGACTaGGCCCGTCTCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTHFPLD*ARLLIS
Trigger: AGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTG...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGACGCTGCCGTCCTCTTaGGCTCCGTACATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRTLPSS*APYILK
Trigger: TTTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGT...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAGGCAGGGTACATTTCTaGAAACCTGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTGRVHF*KPVEVS
Trigger: GCTGACTTCCACAGGTTTGCAGAAATGTACCCTGCC...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACSKRRF*NTLHKG
Trigger: TCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACT...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCGTGACGGCTCGGCTCTaGCAGGCTGTGGATCCACAG +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVVTARL*QAVDPQ
Trigger: CTGTGGATCCACAGCCTGGCAGAGCCGAGCCGTCAC...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACAAACCCGGAGCCTTTaGTTTAGGAAGCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGQTRSL*FRKQTQ
Trigger: TTGAGTTTGCTTCCTAAAGCAAAGGCTCCGGGTTTG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCTTAGCTACCAAAGGCTaGACTAGGATTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTLATKG*TRISSV
Trigger: CACAGAAGAAATCCTAGTGCAGCCTTTGGTAGCTAA...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCCCTTCATTGGCCATTTaGAGGCTCTTCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSPSLAI*RLFSLK
Trigger: TTTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGG...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTCTTCATCTGCAGACCTaGGGAAGGGAGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPLHLQT*GREVAW
Trigger: CCAGGCCACCTCCCTTCCGCAGGTCTGCAGATGAAG...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGTCCGGAGCGTCCCTTTaGCACCAAGACAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRSGASL*HQDSFF
Trigger: GAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGA...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTAGCTGTGTCAACTCTTaGGTGAACACCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCSCVNS*VNTGGG
Trigger: CCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCT...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAACAGGCCGTATATACTaGATCAGAGTTCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSTGRIY*IRVPQI
Trigger: GATCTGGGGAACTCTGATCCAGTATATACGGCCTGT...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGCGTAAAACCACAGGCTaGACGGGCGCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVRKTTG*TGAPGM
Trigger: CATCCCTGGAGCGCCCGTCCAGCCTGTGGTTTTACG...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACTCCTCCCTTCATCCTaGCTCTTTCTGAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSLLPSS*LFLSIC
Trigger: ACAGATACTCAGAAAGAGCCAGGATGAAGGGAGGAG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCATTTCTGCAAACCTGTaGAAGTCAGCGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITISANL*KSANVI
Trigger: GATCACATTCGCTGACTTCCACAGGTTTGCAGAAAT...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCACTTACTGGCCTTGGTaGTCACTTTCTATAGAGATG +
Preference number: 4 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITTYWPW*SLSIEM
Trigger: CATCTCTATAGAAAGTGACCACCAAGGCCAGTAAGT...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACGTACTTACTGGCCTTaGTGGTCACTTTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGRTYWP*WSLSIE
Trigger: CTCTATAGAAAGTGACCACCAAGGCCAGTAAGTACG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGCGTACTTACTGGCCTTaGTGGTCACTTTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGRTYWP*WSLSIE
Trigger: CTCTATAGAAAGTGACCACCAAGGCCAGTAAGTACG...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCAAATCTCATCTGGATTaGCTCTCCTCTCACAATGCC +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSKSHLD*LSSHNA
Trigger: GGCATTGTGAGAGGAGAGCCAATCCAGATGAGATTT...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGACACAGAGCAGCTATaGGTGGGCAGTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGDTEQL*VGSAGP
Trigger: AGGACCAGCACTGCCCACCCATAGCTGCTCTGTGTC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCTGAGTTTTCCGGGCTaGAATCGGCACAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGLSFPG*NRHRSR
Trigger: ACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAG...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACCCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNPWNSG*RQCLYS
Trigger: GCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGG...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCCCTGGAACTCGGGCTaGAGACAGTGCCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVPWNSG*RQCLYS
Trigger: GCTGTACAGGCACTGTCTTCAGCCCGAGTTCCAGGG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCGCCGGAAGAGGCTGTaGCAGAGACTCGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVRRKRL*QRLETR
Trigger: CCTGGTTTCGAGTCTCTGTCACAGCCTCTTCCGGCG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCC +
Preference number: 4 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACEFRLQ*NGLRYA
Trigger: GGCATAACGTAATCCATTTCACTGTAGCCTAAACTC...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCC +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLEFRLQ*NGLRYA
Trigger: GGCATAACGTAATCCATTTCACTGTAGCCTAAACTC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GGGAAAGGGACTAGCCAGCCCCCTGGAGGCAGGTTGATCACACTGGACTCTTCCAAAAACAAGTCGAGGTaGTTGATTGAAACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GKGTSQPPGGRLITLDSSKNKSR*LIETEL
Trigger: CAGCTCCGTTTCAATCAATCACCTCGACTTGTTTTT...GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGGCTGGCTAGTCCCTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAGCAGGCTCTTCTCCTTaGAAAATGAATCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGAGSSP*KMNLYA
Trigger: TGCGTAAAGATTCATTTTTCAAGGAGAAGAGCCTGC...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTAACAATAGCCTAGGCTaGTGCAGTTATCACTGGACT +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTNNSLG*CSYHWT
Trigger: AGTCCAGTGATAACTGCATCAGCCTAGGCTATTGTT...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTCGGTGGGCAGCGCCTaGCGCCCCTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVSVGSA*RPFTAT
Trigger: GGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCACCGA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGGATGTCTCTGCTCTCTaGCTTCATCACGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWDVSAL*LHHDGG
Trigger: TCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATC...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGAGATCGGGATGTCTCTaGTCTCTGCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRRSGCL*SLPSSR
Trigger: TCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCT...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGCACTTTCCGTTGGACTaGGCCCGTCTCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWHFPLD*ARLLIS
Trigger: AGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTG...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCAAACCCGGAGCCTTTaGTTTAGGAAGCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTQTRSL*FRKQTQ
Trigger: TTGAGTTTGCTTCCTAAAGCAAAGGCTCCGGGTTTG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGCACCGGGGGTGGGTTTaGTTTTTCCTGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVHRGWV*FFLRVP
Trigger: TGGGACCCTCAGGAAAAAGCAAACCCACCCCCGGTG...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGTTCCCCTTCTCCTCTTaGTCAATGGCTCGGAATAGG +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRFPFSS*SMARNR
Trigger: CCTATTCCGAGCCATTGACCAAGAGGAGAAGGGGAA...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTTCTGCAAACCTGTaGAAGTCAGCGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIISANL*KSANVI
Trigger: GATCACATTCGCTGACTTCCACAGGTTTGCAGAAAT...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGATTTCTGCAAACCTGTaGAAGTCAGCGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGISANL*KSANVI
Trigger: GATCACATTCGCTGACTTCCACAGGTTTGCAGAAAT...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACCAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNQAHAV*QACAEC
Trigger: ACACTCAGCACACGCCTGCCACACAGCGTGCGCTTG...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAACTTACTGGCCTTGGTaGTCACTTTCTATAGAGATG +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGTYWPW*SLSIEM
Trigger: CATCTCTATAGAAAGTGACCACCAAGGCCAGTAAGT...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTTTCCCGTACTTACTaGCCTTGGTGGTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSFSRTY*PWWSLS
Trigger: AGAAAGTGACCACCAAGGCCAGTAAGTACGGGAAAA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCTTAAATGTCTGTCAGTaGAGAAACGCGTATCACGAA +
Preference number: 4 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTLNVCQ*RNAYHE
Trigger: TTCGTGATACGCGTTTCTCCACTGACAGACATTTAA...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTTACCTCCTTCATTaGCCATTTGCAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVLQRGVVSARLSPDILIIYLLH*PFAGSS
Trigger: AGAAGAGCCTGCAAATGGCCAATGAAGGAGGTAAAT...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGCAAGAAAATCTCATCTaGATTGGCTCTCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: GSTEADRFRARVTRKRTLQENLI*IGSPLT
Trigger: TGTGAGAGGAGAGCCAATCCAGATGAGATTTTCTTG...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 72 bp CTTTACAGCAAAGGCAGCATGGGAACAGGTACACACTaGGAATCCCTACGTTTCCCATCACCCAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LYSKGSMGTGTH*ESLRFPSPRGG
Trigger: GCCACCTCTGGGTGATGGGAAACGTAGGGATTCCAAGTGTGTACCTGTTCCCATGCTGCCTTTGCTGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCCAGAGGGACTTCAGGTaGCACCAAAATACCCCATCC +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAQRDFR*HQNTPS
Trigger: GGATGGGGTATTTTGGTGTCACCTGAAGTCCCTCTG...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCAGGCTCTTCTCCTTaGAAAATGAATCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTAGSSP*KMNLYA
Trigger: TGCGTAAAGATTCATTTTTCAAGGAGAAGAGCCTGC...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCCTTCCCAAAGCCATCTaGCTGGCTGAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVLPKAI*LAESQE
Trigger: CTCCTGGGACTCAGCCAGTCAGATGGCTTTGGGAAG...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGTCAATAACAAAGAGCTaGCCCATCAACAATAGCCTA +
Preference number: 4 (lower is better)
Translates to: FALSPTSHIPELCFMAQGSITKS*PINNSL
Trigger: TAGGCTATTGTTGATGGGTCAGCTCTTTGTTATTGA...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCGCAGAGCCCAGGGATaGGACAAGTGCGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRRRAQG*DKCEGP
Trigger: TGGCCCCTCGCACTTGTCGCATCCCTGGGCTCTGCG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCAGCGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVSAPGP*HVHVMV
Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGCT...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGGTCCACCTCGCCGCTaGCGCTCTCGTCGAACAGTG +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRGPPRR*RSRRTV
Trigger: CACTGTTCGACGAGAGCGGCAGCGGCGAGGTGGACC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACGGCAGACAGGTTTCGTaGCAGAGTGACACGCAAGCG +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNGRQVS*QSDTQA
Trigger: CGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR GCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGGCTCTCCTCTCACAATaGCTGTTGTTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRALLSQ*LLLSFS
Trigger: GGAGAAAGACAACAACAGGCATTGTGAGAGGAGAGC...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCTCCGGAGCGTCCCTTTaGCACCAAGACAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEASGASL*HQDSFF
Trigger: GAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGA...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGACAGGCCGTATATACTaGATCAGAGTTCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWTGRIY*IRVPQI
Trigger: GATCTGGGGAACTCTGATCCAGTATATACGGCCTGT...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGATTAAATGTCTGTCAGTaGAGAAACGCGTATCACGAA +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGLNVCQ*RNAYHE
Trigger: TTCGTGATACGCGTTTCTCCACTGACAGACATTTAA...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCATGCAGATGGTGACATaGAGCAGAGCTGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGMQMVT*SRAAAD
Trigger: GTCAGCTGCAGCTCTGCTCCATGTCACCATCTGCAT...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACGCGCTCCGTACATCTTaGAAGCCAGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNALRTS*KPAGWC
Trigger: ACACCATCCAGCTGGCTTTCAAGATGTACGGAGCGC...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCAGAGGCTCATGGCGGTaGTGTCCACGCGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSRGSWR*CPRGRG
Trigger: GCCCCTCCCGCGTGGACATCACCGCCATGAGCCTCT...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCATTGGGGCTAGGCCCTTaGGTTCACACCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPLGLGP*VHTSPG
Trigger: CCCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAA...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGCGGGCCCTGCTCATTTaGACAATATCCAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVRALLI*TISNLG
Trigger: TCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCG...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGGTGTCAACTCTTGCGTaGACACCGGGGGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVVSTLA*TPGVGL
Trigger: CAAACCCACCCCCGGTGTTCACGCAAGAGTTGACAC...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTCACAGGGCCGGGGGCTaGTCGGGTTCCTTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVHRAGG*SGSFSA
Trigger: TGCGGAGAAGGAACCCGAGCAGCCCCCGGCCCTGTG...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCCACTTTCCGTTGGACTaGGCCCGTCTCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAHFPLD*ARLLIS
Trigger: AGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTG...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGTGGCAACCCTCCCTCTaGCCTCACACCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRWQPSL*PHTPAG
Trigger: ACCTGCTGGGGTGTGAGGGCAGAGGGAGGGTTGCCA...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTTCACGGCCACCCGGTaGAAGCCGCCGGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVFTATR*KPPANH
Trigger: GTGGTTCGCCGGCGGCTTCCACCGGGTGGCCGTGAA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCCTGCCTTCATCACGATaGAGGACATCGTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEALPSSR*RTSSWS
Trigger: TGACCATGACGATGTCCTCCATCGTGATGAAGGCAG...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTCTGCCTTCATCACGATaGAGGACATCGTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCLPSSR*RTSSWS
Trigger: TGACCATGACGATGTCCTCCATCGTGATGAAGGCAG...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCGGCCCCGCACGAGCCTaGCAAATTCTAAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVGPARA*QILKGK
Trigger: CTTGCCTTTTAGAATTTGCCAGGCTCGTGCGGGGCC...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCTCTCCTCTTGGTCAATaGCTCGGAATAGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGSPLGQ*LGIGRS
Trigger: TGACCGACCTATTCCGAGCCATTGACCAAGAGGAGA...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGCCTTTGACTCTAAGATaGGGCAGGACCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVPLTLR*GRTPAL
Trigger: GAGAGCGGGGGTCCTGCCCCATCTTAGAGTCAAAGG...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGCGTACTTACTGGCCTTaGTGGTCACTTTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWRTYWP*WSLSIE
Trigger: CTCTATAGAAAGTGACCACCAAGGCCAGTAAGTACG...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTAAATGTCTGTCAGTaGAGAAACGCGTATCACGAA +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSLNVCQ*RNAYHE
Trigger: TTCGTGATACGCGTTTCTCCACTGACAGACATTTAA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTACAGCAAAGGCAGCATaGGAACAGGTACACACTTGG +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCTAKAA*EQVHTW
Trigger: CCAAGTGTGTACCTGTTCCCATGCTGCCTTTGCTGT...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGGAGTTTAGGCTACAGTaGAATGGATTACGTTATGCC +
Preference number: 4 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWEFRLQ*NGLRYA
Trigger: GGCATAACGTAATCCATTTCACTGTAGCCTAAACTC...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACCAGAGGGACTTCAGGTaGCACCAAAATACCCCATCC +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNQRDFR*HQNTPS
Trigger: GGATGGGGTATTTTGGTGTCACCTGAAGTCCCTCTG...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTGTCGAGGTGATTGATTaGAACGGAGCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCVEVID*NGAEGC
Trigger: ACAACCTTCAGCTCCGTTTCAATCAATCACCTCGAC...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTGTACAGGTATTCCTCTaGGAAGGCAGGGTACATTTC +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCVQVFL*EGRVHF
Trigger: GAAATGTACCCTGCCTTCGCAGAGGAATACCTGTAC...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGCTATGGGTGGGCAGTaGTGGTCCTTCACTACCCCG +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRAMGGQ*WSFTTP
Trigger: CGGGGTAGTGAAGGACCAGCACTGCCCACCCATAGC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTCAGGAGGGGCTGCTGTaGTGGGCTGGATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLQEGLL*WAGCRW
Trigger: CCATCTGCATCCAGCCCAGCACAGCAGCCCCTCCTG...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTGTCATGAGGGCCACCTaGGCCTTCTGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVVMRAT*AFCRAL
Trigger: CAGCGCCCTGCAGAAGGCCCAGGTGGCCCTCATGAC...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000475622.5
CDS-3UTR CCA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCTCATGGTCACAGGGATaGCGTCGAAGTAGGACGAGT +
Preference number: 4 (lower is better)
Translates to: HVMGLVALFHAHLCFISVSWSQG*RRSRTS
Trigger: ACTCGTCCTACTTCGACGCCATCCCTGTGACCATGA...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCCTCGCCGCACGTTGCTaGCATACAGCGCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSLAARC*HTARGS
Trigger: GGAACCCCGCGCTGTATGCCAGCAACGTGCGGCGAG...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAATCTTGAAAGCCAGCTaGATGGTGTCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEILKAS*MVSRVR
Trigger: CCGGACCCTGGACACCATCCAGCTGGCTTTCAAGAT...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCATCAGCCATACTCGGGTaGCAGCGTGACGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPSAILG*QRDASH
Trigger: GTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGA...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAATTGTGCTTGAAGGATaGGTTTCTAATTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: SAGRSAILGWQRDASHHGIVLEG*VSNSVI
Trigger: TATGACAGAATTAGAAACCCATCCTTCAAGCACAAT...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCAAGAAAATCTCATCTaGATTGGCTCTCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRQENLI*IGSPLT
Trigger: TGTGAGAGGAGAGCCAATCCAGATGAGATTTTCTTG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCAGGACTGTACGTCTCTaGCTGTTGAATTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEARTVRL*LLNSAV
Trigger: CACAGCTGAATTCAACAGCCAGAGACGTACAGTCCT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTTTCTCCTTTTCAGTaGCTTTCAGCAGTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSFSPFQ*LSAVCD
Trigger: ATCACAAACTGCTGAAAGCCACTGAAAAGGAGAAAA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGCGAGAATCCTGGTCTaGCCGGGACACGAACACAGG +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLARILV*PGHEHR
Trigger: CCTGTGTTCGTGTCCCGGTCAGACCAGGATTCTCGC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTCTTTCGAAATGTGTCTaGTCCGGGTACAGGTATTCC +
Preference number: 4 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPLSKCV*SGYRYS
Trigger: GGAATACCTGTACCCGGATCAGACACATTTCGAAAG...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCTTCCGCCCAGCGTCTaGGTTTTCCGGGCTGAAATC +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRLPPSV*VFRAEI
Trigger: GATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTATCCTTCACCTCCTTTaGGGGGCTCCCTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSILHLL*GAPLQD
Trigger: GTCCTGCAAGGGAGCCCCTCAAAGGAGGTGAAGGAT...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCGCTTTCAGCAGTTTGTaGTGTGTGTCTTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGAFSSL*CVSCCV
Trigger: AACACAGCAAGACACACATCACAAACTGCTGAAAGC...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAGGCAGACAGGTTTCGTaGCAGAGTGACACGCAAGCG +
Preference number: 4 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPGRQVS*QSDTQA
Trigger: CGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCC...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTGCTGGGAGGCAGTGCTaGAGAGAGGAGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVAGRQC*REEWCP
Trigger: CGGACACCACTCCTCTCTGCAGCACTGCCTCCCAGC...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAAGGCCAGCAGCATCATaGCAGCGGCAACCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLRPAAS*QRQPGA
Trigger: GGCTCCTGGTTGCCGCTGCCATGATGCTGCTGGCCT...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTCTCCTCCCTTCATCCTaGCTCTTTCTGAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPLLPSS*LFLSIC
Trigger: ACAGATACTCAGAAAGAGCCAGGATGAAGGGAGGAG...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCAAATCTCATCTGGATTaGCTCTCCTCTCACAATGCC +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAKSHLD*LSSHNA
Trigger: GGCATTGTGAGAGGAGAGCCAATCCAGATGAGATTT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACACTGCGCCCGTCTCTTaGTTTCTTCTACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNTAPVS*FLLLFS
Trigger: GGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGT...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACCTTGCCACGTCCATGTaGTGGTGTCCAGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNLATSM*WCPVYL
Trigger: CAAATAAACTGGACACCATCACATGGACGTGGCAAG...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp AAGGGAGGTGGCCTGGGTCCCTTCCCTCGGAATATCTTAGTTTATTTACCTCCTCATCCTGGCTCTTTCTaGGTATCTGTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: KGGGLGPFPRNILVYLPPHPGSF*VSVQIF
Trigger: AAAGATCTGGACAGATACTCAGAAAGAGCCAGGATG...AGGAGGTAAATAAACTAAGATATTCCGAGGGAAGGGACCCAGGCCACCTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGCTGGATGCAGATGGTaGCATGGAGCAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLAGCRW*HGAELQ
Trigger: CTGCAGCTCTGCTCCATGTCACCATCTGCATCCAGC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGGGCTGACAGGAAGATaGAGCCGCTTCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLGLTGR*SRFQQG
Trigger: TCCCTGCTGGAAGCGGCTGCATCTTCCTGTCAGCCC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTCCCATGGGGAGGCAGTaGCCTAGAACATTGGACTGC +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLPMGRQ*PRTLDC
Trigger: GCAGTCCAATGTTCTAGGGCACTGCCTCCCCATGGG...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCTTCCATGCCCACTTGTaGTTCATTTCTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGFHAHL*FISVCF
Trigger: GAAACAGACAGAAATGAAGCACAAGTGGGCATGGAA...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTCGTAAAACCACAGGCTaGACGGGCGCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVRKTTG*TGAPGM
Trigger: CATCCCTGGAGCGCCCGTCCAGCCTGTGGTTTTACG...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACAAGCGCACGCTGTGTaGCAGGCGTGTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLQAHAV*QACAEC
Trigger: ACACTCAGCACACGCCTGCCACACAGCGTGCGCTTG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGGCTCTGCCAGGCTGTaGATCCACAGAGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLGSARL*IHRGRQ
Trigger: CTGTCTGCCTCTGTGGATCCACAGCCTGGCAGAGCC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTCAGCCATACTCGGGTaGCAGCGTGACGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVSAILG*QRDASH
Trigger: GTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCATTTACCTCCTTCATTaGCCATTTGCAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAIYLLH*PFAGSS
Trigger: AGAAGAGCCTGCAAATGGCCAATGAAGGAGGTAAAT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGGAAGGGAGGTGGCCTaGGTCCCTTCCCTCGGAATA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLGREVA*VPSLGI
Trigger: TATTCCGAGGGAAGGGACCCAGGCCACCTCCCTTCC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCAGCTGACCTGCTTGTaGACACAGAGCAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRQLTCL*TQSSYG
Trigger: CCCATAGCTGCTCTGTGTCCACAAGCAGGTCAGCTG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTGAGGGGAGTATCTCTTaGTTTCAGTTTCCCTTATTC +
Preference number: 4 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCEGSIS*FQFPLF
Trigger: GAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGTTTTCTCCTTTTCAGTaGCTTTCAGCAGTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRFSPFQ*LSAVCD
Trigger: ATCACAAACTGCTGAAAGCCACTGAAAAGGAGAAAA...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGAAACTGACACAGCGTaGGCCACAGGATTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLETDTA*ATGFPA
Trigger: CGCTGGAAATCCTGTGGCTCACGCTGTGTCAGTTTC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGCGCTCCGTACATCTTaGAAGCCAGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLALRTS*KPAGWC
Trigger: ACACCATCCAGCTGGCTTTCAAGATGTACGGAGCGC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAACTTTCGAAATGTGTCTaGTCCGGGTACAGGTATTCC +
Preference number: 4 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSELSKCV*SGYRYS
Trigger: GGAATACCTGTACCCGGATCAGACACATTTCGAAAG...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCAGAGGGACTTCAGGTaGCACCAAAATACCCCATCC +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRQRDFR*HQNTPS
Trigger: GGATGGGGTATTTTGGTGTCACCTGAAGTCCCTCTG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGAGCAGAGCTGCAGCTaGCCTGCTTGTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLEQSCS*PACGHR
Trigger: TCTGTGTCCACAAGCAGGTCAGCTGCAGCTCTGCTC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTAGCGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVSAPGP*HVHVMV
Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGCT...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAACGCTGCCGTCCTCTTaGGCTCCGTACATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPTLPSS*APYILK
Trigger: TTTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGT...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACCAAACCCGGAGCCTTTaGTTTAGGAAGCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: RISANSKSPRREKRIRRNQTRSL*FRKQTQ
Trigger: TTGAGTTTGCTTCCTAAAGCAAAGGCTCCGGGTTTG...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR GCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCGAGCTGCAGCTGACCTaGTTGTGGACACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSELQLT*LWTQSS
Trigger: GCTGCTCTGTGTCCACAAGCAGGTCAGCTGCAGCTC...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGTTCCATGCCCACTTGTaGTTCATTTCTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVFHAHL*FISVCF
Trigger: GAAACAGACAGAAATGAAGCACAAGTGGGCATGGAA...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 72 bp TTGCTGTCAGTGTTTCTGACAGCACCATCTGTGGGCTaGATGAATGGCTTATTCACTATTGCCCACCTCCTA +
Preference number: 4 (lower is better)
Translates to: LLSVFLTAPSVG*MNGLFTIAHLL
Trigger: TAGGAGGTGGGCAATAGTGAATAAGCCATTCATCAAGCCCACAGATGGTGCTGTCAGAAACACTGACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTGAAACTGACACAGCGTaGGCCACAGGATTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVETDTA*ATGFPA
Trigger: CGCTGGAAATCCTGTGGCTCACGCTGTGTCAGTTTC...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAGGAAGTCAGCGAATGTaGTCTTCCCCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPGSQRM*SSPSPL
Trigger: AAGAGGAGAAGGGGAAGATCACATTCGCTGACTTCC...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGTGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVCWREA*WKFKSK
Trigger: CTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCA...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAAATGATGAAACAAGGTaGTGTCAGAGGGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSENDETR*CQRDFR
Trigger: CCTGAAGTCCCTCTGACATCACCTTGTTTCATCATT...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGAATGATGAAACAAGGTaGTGTCAGAGGGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVNDETR*CQRDFR
Trigger: CCTGAAGTCCCTCTGACATCACCTTGTTTCATCATT...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGATGTCTCTGCTCTCTaGCTTCATCACGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRDVSAL*LHHDGG
Trigger: TCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACCTAATCCAGCTTCTTaGGAACAGGCTTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLPNPAS*EQASAQ
Trigger: CTGGGCGGAAGCCTGTTCGCAAGAAGCTGGATTAGG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTCCTAATCCAGCTTCTTaGGAACAGGCTTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVPNPAS*EQASAQ
Trigger: CTGGGCGGAAGCCTGTTCGCAAGAAGCTGGATTAGG...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTGCGGCTCCTCTCTCTaGAGGAAGGTCAGCCATACT +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVCGSSL*RKVSHT
Trigger: AGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGCA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACTGCAGGGTGGCTGGTaGTGCTGTTCAGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLLQGGW*CCSEDP
Trigger: AGGATCTTCTGAACAGCAGCACCAGCCACCCTGCAG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGGGTTGCATAGTTTCTaGAGAGAAGTCGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRGLHSF*REVGCR
Trigger: ACGACAGCCGACTTCTCTGCAGAAACTATGCAACCC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTGGAGGACATCGTCATaGTCACAGGGATGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVWRTSS*SQGWRR
Trigger: TCGACGCCATCCCTGTGACCATGACGATGTCCTCCA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAATATCCAACCTCGGACTaGAGTTTAGGCTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEYPTSD*SLGYSE
Trigger: TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATA...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACGTGAACACCGGGGGTaGGTTTGCTTTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLREHRG*VCFFLR
Trigger: CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACAGCTGACCTGCTTGTaGACACAGAGCAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLQLTCL*TQSSYG
Trigger: CCCATAGCTGCTCTGTGTCCACAAGCAGGTCAGCTG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
3UTR CAA 72 bp TGTCCGCAAAATACCAGAACACTCCGGAGCGTCCCTTaGCCACCAAGACAGCTTTTTCTACAGAATTTCAAT +
Preference number: 4 (lower is better)
Translates to: CPQNTRTLRSVP*PPRQLFLQNFN
Trigger: ATTGAAATTCTGTAGAAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGAGTGTTCTGGTATTTTGCGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGGAAGTCAGCGAATGTaGTCTTCCCCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLGSQRM*SSPSPL
Trigger: AAGAGGAGAAGGGGAAGATCACATTCGCTGACTTCC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTGCTGTCAGTGTTTCTaGCAGCACCATCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVCCQCF*QHHLWA
Trigger: AGCCCACAGATGGTGCTGTCAGAAACACTGACAGCA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCTCCTCCCTTCATCCTaGCTCTTTCTGAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRLLPSS*LFLSIC
Trigger: ACAGATACTCAGAAAGAGCCAGGATGAAGGGAGGAG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTACAGCAAAGGCAGCATaGGAACAGGTACACACTTGG +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLTAKAA*EQVHTW
Trigger: CCAAGTGTGTACCTGTTCCCATGCTGCCTTTGCTGT...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCTTTCTGAAGAGAAGTTaGCTTTCATTCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAFLKRS*LSFLSL
Trigger: CAGAGATAAGAATGAAAGCCAACTTCTCTTCAGAAA...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCGGAAGTCAGCGAATGTaGTCTTCCCCTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSGSQRM*SSPSPL
Trigger: AAGAGGAGAAGGGGAAGATCACATTCGCTGACTTCC...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTTGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSCWREA*WKFKSK
Trigger: CTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCA...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGCTTTCAGCAGTTTGTaGTGTGTGTCTTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRAFSSL*CVSCCV
Trigger: AACACAGCAAGACACACATCACAAACTGCTGAAAGC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAAGATCGGGATGTCTCTaGTCTCTGCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLRSGCL*SLPSSR
Trigger: TCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCT...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTAGTAAGCGTCGGTTCTaGAACACACTTCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSSKRRF*NTLHKG
Trigger: TCCTTTGTGAAGTGTGTTGCAGAACCGACGCTTACT...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGCATCTAGGCAGGCTTaGTTGTCACCTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLASRQA*LSPLPK
Trigger: TTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGATGC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCCTGCCTTCATCACGATaGAGGACATCGTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSLPSSR*RTSSWS
Trigger: TGACCATGACGATGTCCTCCATCGTGATGAAGGCAG...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTATCTCCTCTTGGTCAATaGCTCGGAATAGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLSPLGQ*LGIGRS
Trigger: TGACCGACCTATTCCGAGCCATTGACCAAGAGGAGA...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCACTGCGCCCGTCTCTTaGTTTCTTCTACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSTAPVS*FLLLFS
Trigger: GGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGT...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCCTTGCCACGTCCATGTaGTGGTGTCCAGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSLATSM*WCPVYL
Trigger: CAAATAAACTGGACACCATCACATGGACGTGGCAAG...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACTTGCCACGTCCATGTaGTGGTGTCCAGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLLATSM*WCPVYL
Trigger: CAAATAAACTGGACACCATCACATGGACGTGGCAAG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCGTCGAGGTGATTGATTaGAACGGAGCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSVEVID*NGAEGC
Trigger: ACAACCTTCAGCTCCGTTTCAATCAATCACCTCGAC...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGGGTTGCATAGTTTCTaGAGAGAAGTTGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSGLHSF*REVGFH
Trigger: ATGAAAGCCAACTTCTCTTCAGAAACTATGCAACCC...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTATTCCAGCTCGGGCCCTaGTCATTTGAACAATATCCA +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLFQLGP*SFEQYP
Trigger: TGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAA...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTTGTGGCATTATTCCATaGCCACTTGTGCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSCGIIP*PLVLHF
Trigger: GAAATGAAGCACAAGTGGGCATGGAATAATGCCACA...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAACAGGCCGTATATACTaGATCAGAGTTCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLTGRIY*IRVPQI
Trigger: GATCTGGGGAACTCTGATCCAGTATATACGGCCTGT...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGAGGGGAGTATCTCTTaGTTTCAGTTTCCCTTATTC +
Preference number: 4 (lower is better)
Translates to: RLFLNVCQWRNAYHESLREGSIS*FQFPLF
Trigger: GAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTATGCTGGAGAGAGGCCTaGTGGAAATTTAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLCWREA*WKFKSK
Trigger: CTTTGACTTAAATTTCCATCAGGCCTCTCTCCAGCA...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTTAGCTACCAAAGGCTaGACTAGGATTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLLATKG*TRISSV
Trigger: CACAGAAGAAATCCTAGTGCAGCCTTTGGTAGCTAA...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTCCTTCATTGGCCATTTaGAGGCTCTTCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVPSLAI*RLFSLK
Trigger: TTTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGG...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR GCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTGTGGCATTATTCCATaGCCACTTGTGCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLCGIIP*PLVLHF
Trigger: GAAATGAAGCACAAGTGGGCATGGAATAATGCCACA...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTACGTACTTACTGGCCTTaGTGGTCACTTTCTATAGAG +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLRTYWP*WSLSIE
Trigger: CTCTATAGAAAGTGACCACCAAGGCCAGTAAGTACG...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTATTTTCCCGTACTTACTaGCCTTGGTGGTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLFSRTY*PWWSLS
Trigger: AGAAAGTGACCACCAAGGCCAGTAAGTACGGGAAAA...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGTTTCTGAAGAGAAGTTaGCTTTCATTCTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVFLKRS*LSFLSL
Trigger: CAGAGATAAGAATGAAAGCCAACTTCTCTTCAGAAA...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR TCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCAAAAACAAGTCGAGGTaGTTGATTGAAACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSKNKSR*LIETEL
Trigger: CAGCTCCGTTTCAATCAATCACCTCGACTTGTTTTT...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR TCA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTTCAATAACAAAGAGCTaGCCCATCAACAATAGCCTA +
Preference number: 4 (lower is better)
Translates to: EGSISWFQFPLFQIWICLSITKS*PINNSL
Trigger: TAGGCTATTGTTGATGGGTCAGCTCTTTGTTATTGA...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR GCA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTTAGCTACCAAAGGCTaGACTAGGATTTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVLATKG*TRISSV
Trigger: CACAGAAGAAATCCTAGTGCAGCCTTTGGTAGCTAA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCATTTCTGCAAACCTGTaGAAGTCAGCGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSISANL*KSANVI
Trigger: GATCACATTCGCTGACTTCCACAGGTTTGCAGAAAT...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CCA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTATTGTGCTTGAAGGATaGGTTTCTAATTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSIVLEG*VSNSVI
Trigger: TATGACAGAATTAGAAACCCATCCTTCAAGCACAAT...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CCA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCATTGTGCTTGAAGGATaGGTTTCTAATTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: AACFLKYLNGVYKILMSSIVLEG*VSNSVI
Trigger: TATGACAGAATTAGAAACCCATCCTTCAAGCACAAT...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS CCA 90 bp GCCGCCTCGGTGGGCAGCGCCTGCCGCCCCTTCACGGCCACCCGGTaGAAGCCGCCGGCGAACCACATGGTGCGCATGATGGCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: AASVGSACRPFTATR*KPPANHMVRMMAFS
Trigger: GCTGAAGGCCATCATGCGCACCATGTGGTTCGCCGGCGGCTTCCACCGGGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCACCGAGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS GCA 90 bp GCTCCGTACATCTGTGGCTGCCACTGGGAGGCCGCGGAAGGGTCCTaGCTGGGCCACGGGCGAGCGCGGCGCAAGCTTGGGCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: APYICGCHWEAAEGS*LGHGRARRKLGLQS
Trigger: ACTCTGCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGACCCTTCCGCGGCCTCCCAGTGGCAGCCACAGATGTACGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS CCA 90 bp CGTACATCTGTGGCTGCCACTGGGAGGCCGCGGAAGGGTCCTGCCTaGGCCACGGGCGAGCGCGGCGCAAGCTTGGGCTGCAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RTSVAATGRPRKGPA*ATGERGASLGCRVP
Trigger: GGGAACTCTGCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGACCCTTCCGCGGCCTCCCAGTGGCAGCCACAGATGTACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS-3UTR CAA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGATGACTCGCCGCACGTaGCTGGCATACAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: ACAECARRPARCTLPPEEMTRRT*LAYSAG
Trigger: CCCCGCGCTGTATGCCAGCAACGTGCGGCGAGTCAT...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS TCA 90 bp TGGTCACAGGGATGGCGTCGAAGTAGGACGAGTGAGGCGCGAGCGTaGGGATGGCCGCCTCGGTGGGCAGCGCCTGCCGCCCCTTCACGG +
Preference number: 5 (lower is better)
Translates to: WSQGWRRSRTSEARA*GWPPRWAAPAAPSR
Trigger: CCGTGAAGGGGCGGCAGGCGCTGCCCACCGAGGCGGCCATCCTCACGCTCGCGCCTCACTCGTCCTACTTCGACGCCATCCCTGTGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS-3UTR CAA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCAGCGCTCCAGGTCCTaGCCACGTCCATGTGATGGT +
Preference number: 5 (lower is better)
Translates to: ACAECARRPARCTLPPEEQRSRS*PRPCDG
Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGCTG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCAGCGCTCCAGGTCCTaGCCACGTCCATGTGATGGT +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSQRSRS*PRPCDG
Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGCTG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGACGGCGGCGGCTGCCTaGCGCTTCCAGCTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTTAAAA*RFQLGP
Trigger: GGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGTGTGCTGAGTGTGCACGGAGGCCCGCCCGGTGCACGCTGCCGCCGGAAGAGCCTTCACTACCCCGTTaGCCCTCAGCCCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: ACAECARRPARCTLPPEEPSLPR*PSAPLL
Trigger: GAGAAGTGGGGCTGAGGGCAAACGGGGTAGTGAAGG...CTCTTCCGGCGGCAGCGTGCACCGGGCGGGCCTCCGTGCACACTCAGCACACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS CCA 90 bp AGCCCAGGGATGCGACAAGTGCGAGGGGCCAGGCCAGCAGCATCATaGCAGCGGCAACCAGGAGCCGGACCGGGAAGAGCGTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: SPGMRQVRGARPAAS*QRQPGAGPGRASVS
Trigger: TGACACTGACGCTCTTCCCGGTCCGGCTCCTGGTTGCCGCTGCCATGATGCTGCTGGCCTGGCCCCTCGCACTTGTCGCATCCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCTGCAGCTGACCTGCTaGTGGACACAGAGCAGCTAT +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSLQLTC*WTQSSY
Trigger: ATAGCTGCTCTGTGTCCACAAGCAGGTCAGCTGCAG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp TCACGGCCACCCGGTGGAAGCCGCCGGCGAACCACATGGTGCGCATaGTGGCCTTCAGCAGGAAGTCCACAACCTTCCTCCACAGGGCCG +
Preference number: 5 (lower is better)
Translates to: SRPPGGSRRRTTWCA*WPSAGSPQPSSTGP
Trigger: CGGCCCTGTGGAGGAAGGTTGTGGACTTCCTGCTGAAGGCCATCATGCGCACCATGTGGTTCGCCGGCGGCTTCCACCGGGTGGCCGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
CDS GCA 90 bp GCCTTCAGCAGGAAGTCCACAACCTTCCTCCACAGGGCCGGGGGCTaGTCGGGTTCCTTCTCCGCAGAGCCCAGGGATGCGACAAGTGCG +
Preference number: 5 (lower is better)
Translates to: AFSRKSTTFLHRAGG*SGSFSAEPRDATSA
Trigger: CGCACTTGTCGCATCCCTGGGCTCTGCGGAGAAGGAACCCGAGCAGCCCCCGGCCCTGTGGAGGAAGGTTGTGGACTTCCTGCTGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCACCCCCAGGGCCGTCTaGAGGATGCAGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDATPRAV*RMQDRS
Trigger: TGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGGT...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCGGCACAGAAGCCGTTaGGGATTGGCGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDARHRSR*GLAQVR
Trigger: CCTCACCTGCGCCAATCCCAAACGGCTTCTGTGCCG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCAGTGCCCTAGAACATaGGACTGCCATCCTGATGGA +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSQCPRT*DCHPDG
Trigger: TCCATCAGGATGGCAGTCCAATGTTCTAGGGCACTG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS GCA 90 bp CGAGCGCGGCGCAAGCTTGGGCTGCAGAGTTCCCCCACGGCCCTCTaGCTCCGTGAGTGCAGGCTACAGCAGACGTGTTCACAAGCATCA +
Preference number: 5 (lower is better)
Translates to: RARRKLGLQSSPTAL*LRECRLQQTCSQAS
Trigger: TGATGCTTGTGAACACGTCTGCTGTAGCCTGCACTCACGGAGGCAGAGGGCCGTGGGGGAACTCTGCAGCCCAAGCTTGCGCCGCGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCAGCTGTGTCAACTCTaGCGTGAACACCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAQLCQL*REHRGW
Trigger: CCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCCTTCACTACCCCGTTaGCCCTCAGCCCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAPSLPR*PSAPLL
Trigger: GAGAAGTGGGGCTGAGGGCAAACGGGGTAGTGAAGG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGACTGCGCCCGTCTCTaGATTTCTTCTACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSDCARL*ISSTVF
Trigger: GAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGATGACTCGCCGCACGTaGCTGGCATACAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: FALSPTSHIPELCFMAQGMTRRT*LAYSAG
Trigger: CCCCGCGCTGTATGCCAGCAACGTGCGGCGAGTCAT...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGAAGCCGTTTGGGATaGGCGCAGGTGAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDARSRLG*AQVRSL
Trigger: CAGAGACCTCACCTGCGCCAATCCCAAACGGCTTCT...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTTCCTTCATTGGCCATTaGCAGGCTCTTCTCCTTGAA +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSSFIGH*QALLLE
Trigger: TTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGGA...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTGCACCATCTGTGGGCTaGATGAATGGCTTATTCACT +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSAPSVG*MNGLFT
Trigger: AGTGAATAAGCCATTCATCAAGCCCACAGATGGTGC...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCCAGCGCTCCAGGTCCTaGCCACGTCCATGTGATGGT +
Preference number: 5 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTQRSRS*PRPCDG
Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGCTG...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGACCCCCAGGGCCGTCTaGAGGATGCAGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: GSTEADRFRARVTRKRTLTPRAV*RMQDRS
Trigger: TGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGGT...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGACGGCACAGAAGCCGTTaGGGATTGGCGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SAGRSAILGWQRDASHHGRHRSR*GLAQVR
Trigger: CCTCACCTGCGCCAATCCCAAACGGCTTCTGTGCCG...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTCAGCGCTCCAGGTCCTaGCCACGTCCATGTGATGGT +
Preference number: 5 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACQRSRS*PRPCDG
Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGCTG...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGACGCTGCCGTCCTCTaGCGCTCCGTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITDAAVL*RSVHLE
Trigger: TTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGTC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACGGCACAGAAGCCGTTaGGGATTGGCGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSRHRSR*GLAQVR
Trigger: CCTCACCTGCGCCAATCCCAAACGGCTTCTGTGCCG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCTTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: AVLQRGVVSARLSPDILIFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCGAAGCCCCTCTGCCTTaGACTCTAAGATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTEAPLP*TLRWGR
Trigger: CCTGCCCCATCTTAGAGTCAAAGGCAGAGGGGCTTC...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGATCCTTCACCTCCTTaGAGGGGCTCCCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITDPSPP*RGSLAG
Trigger: TCCTGCAAGGGAGCCCCTCAAAGGAGGTGAAGGATC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCCCCCCTGGAGGCAGGTaGATCACACTGGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: AVLQRGVVSARLSPDILIPPGGR*ITLDSS
Trigger: GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGG...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTGCGCTCCGTACATCTaGAAAGCCAGCTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITCAPYI*KASWMV
Trigger: CACCATCCAGCTGGCTTTCAAGATGTACGGAGCGCA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGGAGACGCTGCCGTCCTCTaGCGCTCCGTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: SAGRSAILGWQRDASHHGDAAVL*RSVHLE
Trigger: TTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGTC...TCCATGGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTAGAAGCCGTTTGGGATaGGCGCAGGTGAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACRSRLG*AQVRSL
Trigger: CAGAGACCTCACCTGCGCCAATCCCAAACGGCTTCT...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCCTCCGGAGCGTCCCTTaGCCACCAAGACAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTLRSVP*PPRQLF
Trigger: AAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGAG...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCTCTAGGCAGGCTTGCTaGTCACCTCTTCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTSRQAC*SPLPKA
Trigger: GGCTTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGA...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GGATCCACAGAGGCAGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGGATCCTTCACCTCCTTaGAGGGGCTCCCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: GSTEADRFRARVTRKRTLDPSPP*RGSLAG
Trigger: TCCTGCAAGGGAGCCCCTCAAAGGAGGTGAAGGATC...CAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCTGCCTCTGTGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GGGGTCCAGGCCAGGCGGGGGATCCGCGTGCGCGCCCTCCGATTCTCGCACAGTCCACCTCCTATGGCATaGTTAAGGAATTTACTTTAC +
Preference number: 5 (lower is better)
Translates to: GVQARRGIRVRALRFSHSPPPMA*LRNLLY
Trigger: GTAAAGTAAATTCCTTAACAATGCCATAGGAGGTGG...ACTGTGCGAGAATCGGAGGGCGCGCACGCGGATCCCCCGCCTGGCCTGGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp GCTTCTTGCGAACAGGCTTCCGCCCAGCGTCTGAGTTTTCCGGGCTaGAATCGGCACAGAAGCCGTTTGGGATTGGCGCAGGTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ASCEQASAQRLSFPG*NRHRSRLGLAQVRS
Trigger: AGACCTCACCTGCGCCAATCCCAAACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAGCCTGTTCGCAAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS CCA 90 bp GGATGTCTCTGCTCTCTGCCTTCATCACGATGGAGGACATCGTCATaGTCACAGGGATGGCGTCGAAGTAGGACGAGTGAGGCGCGAGCG +
Preference number: 5 (lower is better)
Translates to: GCLCSLPSSRWRTSS*SQGWRRSRTSEARA
Trigger: CGCTCGCGCCTCACTCGTCCTACTTCGACGCCATCCCTGTGACCATGACGATGTCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS-3UTR CAA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCAGACGCTGCCGTCCTCTaGCGCTCCGTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSDAAVL*RSVHLE
Trigger: TTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGTC...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGACCCCCAGGGCCGTCTaGAGGATGCAGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWTPRAV*RMQDRS
Trigger: TGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGGT...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGACGGCGGCGGCTGCCTaGCGCTTCCAGCTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVTAAAA*RFQLGP
Trigger: GGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGAAGCCCCTCTGCCTTaGACTCTAAGATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTEAPLP*TLRWGR
Trigger: CCTGCCCCATCTTAGAGTCAAAGGCAGAGGGGCTTC...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCGCACCATCTGTGGGCTaGATGAATGGCTTATTCACT +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAAPSVG*MNGLFT
Trigger: AGTGAATAAGCCATTCATCAAGCCCACAGATGGTGC...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCTTAGGCAGGTCCTGTTaGTACAAGTTCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDALGRSC*YKFLLE
Trigger: TTCCAGAAGGAACTTGTACAAACAGGACCTGCCTAA...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCGAACTCGATTTCCACTaGGTTGTGAAACTGACACAG +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAELDFH*VVKLTQ
Trigger: CTGTGTCAGTTTCACAACCAAGTGGAAATCGAGTTC...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCATGACTCGCCGCACGTaGCTGGCATACAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAMTRRT*LAYSAG
Trigger: CCCCGCGCTGTATGCCAGCAACGTGCGGCGAGTCAT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAAGAAGCCGTTTGGGATaGGCGCAGGTGAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTRSRLG*AQVRSL
Trigger: CAGAGACCTCACCTGCGCCAATCCCAAACGGCTTCT...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAGAAGCCCCTCTGCCTTaGACTCTAAGATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTEAPLP*TLRWGR
Trigger: CCTGCCCCATCTTAGAGTCAAAGGCAGAGGGGCTTC...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAAAATCTCATCTGGATaGGCTCTCCTCTCACAATGC +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDAKISSG*ALLSQC
Trigger: GCATTGTGAGAGGAGAGCCAATCCAGATGAGATTTT...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCTCTGCTGGGTGCTTATaGAGCTTCTTGGGTATCTTA +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDASAGCL*SFLGIL
Trigger: TAAGATACCCAAGAAGCTCAATAAGCACCCAGCAGA...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp TGGGTCCTAATCCAGCTTCTTGCGAACAGGCTTCCGCCCAGCGTCTaGGTTTTCCGGGCTGAAATCGGCACAGAAGCCGTTTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: WVLIQLLANRLPPSV*VFRAEIGTEAVWDW
Trigger: CCAATCCCAAACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAGCCTGTTCGCAAGAAGCTGGATTAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
CDS-3UTR CAA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTGACTGCGCCCGTCTCTaGATTTCTTCTACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAADCARL*ISSTVF
Trigger: GAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTC...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGGACGCTGCCGTCCTCTaGCGCTCCGTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWDAAVL*RSVHLE
Trigger: TTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGTC...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTTCGGGCCCTGCTCATTaGAACAATATCCAACCTCGG +
Preference number: 5 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTSGPAH*NNIQPR
Trigger: CCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGA...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAACGGCGGCGGCTGCCTaGCGCTTCCAGCTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPTAAAA*RFQLGP
Trigger: GGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GCGGCTCCTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCCTCTCACAATGCCTGTaGTTGTCTTTCTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: AAPLSAGRSAILGWQRDALSQCL*LSFSFI
Trigger: AATGAAGGAGAAAGACAACAACAGGCATTGTGAGAG...GGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAGGAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp TTCCGGGCTGAAATCGGCACAGAAGCCGTTTGGGATTGGCGCAGGTaGGGTCTCTGCACAGCTTTCGAAATGTGTCTGATCCGGGTACAG +
Preference number: 5 (lower is better)
Translates to: FRAEIGTEAVWDWRR*GLCTAFEMCLIRVQ
Trigger: CTGTACCCGGATCAGACACATTTCGAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCCAAACGGCTTCTGTGCCGATTTCAGCCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS CCA 90 bp GCAAACCTGTGGAAGTCAGCGAATGTGATCTTCCCCTTCTCCTCTTaGTCAATGGCTCGGAATAGGTCGGTCACGGTGAGCTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: ANLWKSANVIFPFSS*SMARNRSVTVSSAT
Trigger: GGTGGCAGAGCTCACCGTGACCGACCTATTCCGAGCCATTGACCAAGAGGAGAAGGGGAAGATCACATTCGCTGACTTCCACAGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS-3UTR CAA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCGACTGCGCCCGTCTCTaGATTTCTTCTACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: AVLQRGVVSARLSPDILIDCARL*ISSTVF
Trigger: GAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTC...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCTTAGGCAGGTCCTGTTaGTACAAGTTCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITLGRSC*YKFLLE
Trigger: TTCCAGAAGGAACTTGTACAAACAGGACCTGCCTAA...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTTAGGCAGGTCCTGTTaGTACAAGTTCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTLGRSC*YKFLLE
Trigger: TTCCAGAAGGAACTTGTACAAACAGGACCTGCCTAA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCTCTCTGCAGGAAGGTCAGCCATACTCGGGTGGCAGCGTGACGCCAGTCACCATGAATGCACCAGGTTaGAAGGTAATTAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LSLQEGQPYSGGSVTPVTMNAPG*KVIRQV
Trigger: GACCTGCCTAATTACCTTCAAACCTGGTGCATTCAT...GGTGACTGGCGTCACGCTGCCACCCGAGTATGGCTGACCTTCCTGCAGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGATGAATGCACCAGGTTaGAAGGTAATTAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTMNAPG*KVIRQV
Trigger: GACCTGCCTAATTACCTTCAAACCTGGTGCATTCAT...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTCCGTACTTACTGGCCTaGGTGGTCACTTTCTATAGA +
Preference number: 5 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACPYLLA*VVTFYR
Trigger: TCTATAGAAAGTGACCACCAAGGCCAGTAAGTACGG...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCCCCCTGGAGGCAGGTaGATCACACTGGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGPPGGR*ITLDSS
Trigger: GGAAGAGTCCAGTGTGATCAACCTGCCTCCAGGGGG...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTGAACTCGATTTCCACTaGGTTGTGAAACTGACACAG +
Preference number: 5 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACELDFH*VVKLTQ
Trigger: CTGTGTCAGTTTCACAACCAAGTGGAAATCGAGTTC...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAATGACTCGCCGCACGTaGCTGGCATACAGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEMTRRT*LAYSAG
Trigger: CCCCGCGCTGTATGCCAGCAACGTGCGGCGAGTCAT...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCAGAAGCCGTTTGGGATaGGCGCAGGTGAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEARSRLG*AQVRSL
Trigger: CAGAGACCTCACCTGCGCCAATCCCAAACGGCTTCT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCACGGCGGCGGCTGCCTaGCGCTTCCAGCTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: AACFLKYLNGVYKILMSSTAAAA*RFQLGP
Trigger: GGGCCCGAGCTGGAAGCGCAAGGCAGCCGCCGCCGT...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCACCGTACTTACTGGCCTaGGTGGTCACTTTCTATAGA +
Preference number: 5 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSPYLLA*VVTFYR
Trigger: TCTATAGAAAGTGACCACCAAGGCCAGTAAGTACGG...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTCCGTACTTACTGGCCTaGGTGGTCACTTTCTATAGA +
Preference number: 5 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTPYLLA*VVTFYR
Trigger: TCTATAGAAAGTGACCACCAAGGCCAGTAAGTACGG...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACAGTACGTCTCTGGCTGTaGAATTCAGCTGTGACCACA +
Preference number: 5 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTVRLWL*NSAVTT
Trigger: TGTGGTCACAGCTGAATTCAACAGCCAGAGACGTAC...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGCAGTGCCCTAGAACATaGGACTGCCATCCTGATGGA +
Preference number: 5 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRQCPRT*DCHPDG
Trigger: TCCATCAGGATGGCAGTCCAATGTTCTAGGGCACTG...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGAGCGGAGCCCAGAGGTCACTCGCAAAGAGGCTCATGGCGGTGATGTCCACGTTATTCCATGCCCACTaGTGCTTCATTTCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: RSGAQRSLAKRLMAVMSTLFHAH*CFISVC
Trigger: ACAGACAGAAATGAAGCACAAGTGGGCATGGAATAA...CGTGGACATCACCGCCATGAGCCTCTTTGCGAGTGACCTCTGGGCTCCGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp GGGATTGGCGCAGGTGAGGTCTCTGCACAGCTTTCGAAATGTGTCTaGTCCGGGTACAGGTATTCCTCTGCGAAGGCAGGGTACATTTCT +
Preference number: 5 (lower is better)
Translates to: GIGAGEVSAQLSKCV*SGYRYSSAKAGYIS
Trigger: AGAAATGTACCCTGCCTTCGCAGAGGAATACCTGTACCCGGATCAGACACATTTCGAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS-3UTR CAA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACTGTGGCCACTTTCCGTaGGACTGCGCCCGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RISANSKSPRREKRIRRNCGHFP*DCARLL
Trigger: CAAGAGACGGGCGCAGTCCAACGGAAAGTGGCCACA...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS-3UTR CAA 90 bp CAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCATTAGGCAGGTCCTGTTaGTACAAGTTCCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: QCCREEWCPHGCHQTSSSLGRSC*YKFLLE
Trigger: TTCCAGAAGGAACTTGTACAAACAGGACCTGCCTAA...TGATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACATCCTTCATTGGCCATTaGCAGGCTCTTCTCCTTGAA +
Preference number: 5 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTSFIGH*QALLLE
Trigger: TTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGGA...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTTCACAATGCCTGTTGTaGTCTTTCTCCTTCATTGGC +
Preference number: 5 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTSQCLL*SFSFIG
Trigger: GCCAATGAAGGAGAAAGACAACAACAGGCATTGTGA...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TTTGCCCTCAGCCCCACTTCTCACATTCCCGAGCTCTGCTTCATGGCCCAGGGGCTCTCACAATGCCTGTaGTTGTCTTTCTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: FALSPTSHIPELCFMAQGLSQCL*LSFSFI
Trigger: AATGAAGGAGAAAGACAACAACAGGCATTGTGAGAG...CCCCTGGGCCATGAAGCAGAGCTCGGGAATGTGAGAAGTGGGGCTGAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GACTGTACGTCTCTGGCTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCTGCAGCTGACCTGCTaGTGGACACAGAGCAGCTAT +
Preference number: 5 (lower is better)
Translates to: DCTSLAVEFSCDHMAYCGLQLTC*WTQSSY
Trigger: ATAGCTGCTCTGTGTCCACAAGCAGGTCAGCTGCAG...GCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAGCCAGAGACGTACAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TCTGTCCTGTCCTCCTCCTTTTCTAGGGCTCCAATCACATGTGATGGGCCTTGTTCTAGGCAGGCTTGCTaGTCACCTCTTCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SVLSSSFSRAPITCDGPCSRQAC*SPLPKA
Trigger: GGCTTTGGGAAGAGGTGACAAGCAAGCCTGCCTAGA...ACAAGGCCCATCACATGTGATTGGAGCCCTAGAAAAGGAGGAGGACAGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGCCCTTGAGTTCACACCTCCCCAGGGGACCCAGCGGAAGGAGAGGGATTACCGATATGGATATGTCTTaGCTGTCAGTGTTTCTGACA +
Preference number: 5 (lower is better)
Translates to: RPLSSHLPRGPSGRRGITDMDMS*LSVFLT
Trigger: TGTCAGAAACACTGACAGCAAAGACATATCCATATC...GGTAATCCCTCTCCTTCCGCTGGGTCCCCTGGGGAGGTGTGAACTCAAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS GCA 90 bp TATATACTGGATCAGAGTTCCCCAGATCGGGATGTCTCTGCTCTCTaGCTTCATCACGATGGAGGACATCGTCATGGTCACAGGGATGGC +
Preference number: 5 (lower is better)
Translates to: YILDQSSPDRDVSAL*LHHDGGHRHGHRDG
Trigger: GCCATCCCTGTGACCATGACGATGTCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCTGGGGAACTCTGATCCAGTATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS-3UTR CAA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGGACTGCGCCCGTCTCTaGATTTCTTCTACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWDCARL*ISSTVF
Trigger: GAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTC...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGACAGGTTTCGTGCCAGAGTGACACGCAAGCGCACGCTGTGTGGCAGGCGTGTTGGTGTCCAGTTTATTaGGATATCGTAAAACCACAG +
Preference number: 5 (lower is better)
Translates to: RQVSCQSDTQAHAVWQACWCPVY*DIVKPQ
Trigger: CTGTGGTTTTACGATATCCAAATAAACTGGACACCA...ACACGCCTGCCACACAGCGTGCGCTTGCGTGTCACTCTGGCACGAAACCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCAGTGCTGCAGAGAGGAGTGGTGTCCGCACGGCTGTCACCAGACATCCTCATCTGGTGTCCAGTTTATTaGGATATCGTAAAACCACAG +
Preference number: 5 (lower is better)
Translates to: AVLQRGVVSARLSPDILIWCPVY*DIVKPQ
Trigger: CTGTGGTTTTACGATATCCAAATAAACTGGACACCA...GATGAGGATGTCTGGTGACAGCCGTGCGGACACCACTCCTCTCTGCAGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CTGTTGAATTCAGCTGTGACCACATGGCTTACTGTGGCCAATGAACCAGGAGTGTGCGCTCCGTACATCTaGAAAGCCAGCTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: LLNSAVTTWLTVANEPGVCAPYI*KASWMV
Trigger: CACCATCCAGCTGGCTTTCAAGATGTACGGAGCGCA...CACTCCTGGTTCATTGGCCACAGTAAGCCATGTGGTCACAGCTGAATTCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAATTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGTCCTTCATTGGCCATTaGCAGGCTCTTCTCCTTGAA +
Preference number: 5 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWSFIGH*QALLLE
Trigger: TTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGGA...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp ACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTGCGGCTGTTTCTGAAGAGAAGTaGGCTTTCATTCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: TLRTAQPSVSFHKQKTAAVSEEK*AFILIS
Trigger: AGAGATAAGAATGAAAGCCAACTTCTCTTCAGAAAC...AGCCGCAGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CAGCTGTGTCAACTCTTGCGTGAACACCGGGGGTGGGTTTGCTTTTTCCTGAGGGAACTCGATTTCCACTaGGTTGTGAAACTGACACAG +
Preference number: 5 (lower is better)
Translates to: QLCQLLREHRGWVCFFLRELDFH*VVKLTQ
Trigger: CTGTGTCAGTTTCACAACCAAGTGGAAATCGAGTTC...CCTCAGGAAAAAGCAAACCCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TTGCGCTTCCAGCTCGGGCCCTGCTCATTTGAACAATATCCAACCTCGGACTGGTCACAATGCCTGTTGTaGTCTTTCTCCTTCATTGGC +
Preference number: 5 (lower is better)
Translates to: LRFQLGPCSFEQYPTSDWSQCLL*SFSFIG
Trigger: GCCAATGAAGGAGAAAGACAACAACAGGCATTGTGA...CCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGAGCTGGAAGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp AAATCATTATCTGTGGCCACTTTCCGTTGGACTGCGCCCGTCTCTTaGTTTCTTCTACTGTTTTCCTGCGAGAATCCTGGTCTGACCGGG +
Preference number: 5 (lower is better)
Translates to: KSLSVATFRWTAPVS*FLLLFSCENPGLTG
Trigger: CCCGGTCAGACCAGGATTCTCGCAGGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTGGCCACAGATAATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS GCA 90 bp TGCACAGCTTTCGAAATGTGTCTGATCCGGGTACAGGTATTCCTCTaGGAAGGCAGGGTACATTTCTGCAAACCTGTGGAAGTCAGCGAA +
Preference number: 5 (lower is better)
Translates to: CTAFEMCLIRVQVFL*EGRVHFCKPVEVSE
Trigger: TTCGCTGACTTCCACAGGTTTGCAGAAATGTACCCTGCCTTCGCAGAGGAATACCTGTACCCGGATCAGACACATTTCGAAAGCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS GCA 90 bp AGGAGCCCTGAGAAACGGAAAGATGGGAAAGCAAGACAGGTGATATaGCACATTGTACAAGGCTTATCTGGGCATCCTGGTGTAAGCTCG +
Preference number: 5 (lower is better)
Translates to: RSPEKRKDGKARQVI*HIVQGLSGHPGVSS
Trigger: CGAGCTTACACCAGGATGCCCAGATAAGCCTTGTACAATGTGGCATATCACCTGTCTTGCTTTCCCATCTTTCCGTTTCTCAGGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS CCA 90 bp AAGACAGGTGATATGCCACATTGTACAAGGCTTATCTGGGCATCCTaGTGTAAGCTCGTGTCTGCATCAACCACTGTGAAGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: KTGDMPHCTRLIWAS*CKLVSASTTVKSAV
Trigger: CACAGCGCTCTTCACAGTGGTTGATGCAGACACGAGCTTACACCAGGATGCCCAGATAAGCCTTGTACAATGTGGCATATCACCTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS-3UTR CAA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGTGCGCTCCGTACATCTaGAAAGCCAGCTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVCAPYI*KASWMV
Trigger: CACCATCCAGCTGGCTTTCAAGATGTACGGAGCGCA...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCACAGCTGTGTCAACTCTaGCGTGAACACCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPQLCQL*REHRGW
Trigger: CCACCCCCGGTGTTCACGCAAGAGTTGACACAGCTG...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CTCATCACCCTCCGCACCGCACAGCCCAGCGTCTCCTTCCACAAGCAAAAGACTTTCCTTGATAGTATGTaGTTTTTCTCCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LITLRTAQPSVSFHKQKTFLDSM*FFSSCF
Trigger: AAAGCAGCTGGAGAAAAACAACATACTATCAAGGAA...AGTCTTTTGCTTGTGGAAGGAGACGCTGGGCTGTGCGGTGCGGAGGGTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp CTGGTTTATCTCAACTGGGAACTTAGCTGGGTTTCTGCGGGTTCTTaGGTGTGTCAGCCACTACTGGACCCATTTCTTTCTTTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LVYLNWELSWVSAGS*VCQPLLDPFLSLGK
Trigger: CTTCCCCAAAGAAAGAAATGGGTCCAGTAGTGGCTGACACACTCAAGAACCCGCAGAAACCCAGCTAAGTTCCCAGTTGAGATAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514484.6
CDS TCA 90 bp TTATCTGGGCATCCTGGTGTAAGCTCGTGTCTGCATCAACCACTGTaGAGAGCGCTGTGTAACTCTGTATCCATACGAACCTCGATTTCC +
Preference number: 5 (lower is better)
Translates to: LSGHPGVSSCLHQPL*RALCNSVSIRTSIS
Trigger: GGAAATCGAGGTTCGTATGGATACAGAGTTACACAGCGCTCTTCACAGTGGTTGATGCAGACACGAGCTTACACCAGGATGCCCAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS CCA 90 bp TGGGAAAGCAAGACAGGTGATATGCCACATTGTACAAGGCTTATCTaGGCATCCTGGTGTAAGCTCGTGTCTGCATCAACCACTGTGAAG +
Preference number: 5 (lower is better)
Translates to: WESKTGDMPHCTRLI*ASWCKLVSASTTVK
Trigger: CTTCACAGTGGTTGATGCAGACACGAGCTTACACCAGGATGCCCAGATAAGCCTTGTACAATGTGGCATATCACCTGTCTTGCTTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS-3UTR CAA 90 bp TCGGTTCTGCAACACACTTCACAAAGGAACAAGATACAAACAGCCCCCGAGGCCATGAATGCACCAGGTTaGAAGGTAATTAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SVLQHTSQRNKIQTAPEAMNAPG*KVIRQV
Trigger: GACCTGCCTAATTACCTTCAAACCTGGTGCATTCAT...GGCCTCGGGGGCTGTTTGTATCTTGTTCCTTTGTGAAGTGTGTTGCAGAACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTACCCCCAGGGCCGTCTaGAGGATGCAGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVTPRAV*RMQDRS
Trigger: TGACCTGTCCTGCATCCTCAAGACGGCCCTGGGGGT...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp TGCGCGCCCTCCGATTCTCGCACAGTAAGCGTCGGTTCTGCAACACACTTCACATTCCTTGATAGTATGTaGTTTTTCTCCAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CAPSDSRTVSVGSATHFTFLDSM*FFSSCF
Trigger: AAAGCAGCTGGAGAAAAACAACATACTATCAAGGAA...TGTGAAGTGTGTTGCAGAACCGACGCTTACTGTGCGAGAATCGGAGGGCGCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS TCA 90 bp CTACTGGACCCATTTCTTTCTTTGGGGAAGAAGGCTTTCTTGGCTTaGAAGACAGGCTATTTCACTCTGTGGAAACTGGGCCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLDPFLSLGKKAFLA*KTGYFTLWKLGLLQ
Trigger: CTGCAGAAGGCCCAGTTTCCACAGAGTGAAATAGCCTGTCTTTCAAGCCAAGAAAGCCTTCTTCCCCAAAGAAAGAAATGGGTCCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514484.6
CDS CCA 90 bp CATGTGATGGTGTCCAGTTTATTTGGATATCGTAAAACCACAGGCTaGACGGGCGCTCCAGGGATGAATGCACCAGGTTTGAAGGTAATT +
Preference number: 5 (lower is better)
Translates to: HVMVSSLFGYRKTTG*TGAPGMNAPGLKVI
Trigger: AATTACCTTCAAACCTGGTGCATTCATCCCTGGAGCGCCCGTCCAGCCTGTGGTTTTACGATATCCAAATAAACTGGACACCATCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000513757.5
ENST00000611696.3
ENST00000625809.2
ENST00000628540.1
CDS CCA 90 bp CGGGTTCTTGAGTGTGTCAGCCACTACTGGACCCATTTCTTTCTTTaGGGAAGAAGGCTTTCTTGGCTTGAAAGACAGGCTATTTCACTC +
Preference number: 5 (lower is better)
Translates to: RVLECVSHYWTHFFL*GRRLSWLERQAISL
Trigger: GAGTGAAATAGCCTGTCTTTCAAGCCAAGAAAGCCTTCTTCCCCAAAGAAAGAAATGGGTCCAGTAGTGGCTGACACACTCAAGAACCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514484.6
CDS-3UTR CAA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTATTTGGGGCTAGGCCCTaGAGTTCACACCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLFGARP*SSHLPR
Trigger: CCTGGGGAGGTGTGAACTCAAGGGCCTAGCCCCAAA...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTGAAGCCCCTCTGCCTTaGACTCTAAGATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: EGSISWFQFPLFQIWICLEAPLP*TLRWGR
Trigger: CCTGCCCCATCTTAGAGTCAAAGGCAGAGGGGCTTC...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CGAATATCCGCCAACTCTAAGTCGCCACGAAGAGAAAAGAGAATCAGGAGGAACTCCTTCATTGGCCATTaGCAGGCTCTTCTCCTTGAA +
Preference number: 5 (lower is better)
Translates to: RISANSKSPRREKRIRRNSFIGH*QALLLE
Trigger: TTCAAGGAGAAGAGCCTGCAAATGGCCAATGAAGGA...GTTCCTCCTGATTCTCTTTTCTCTTCGTGGCGACTTAGAGTTGGCGGATATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283415.4
ENST00000611696.3
CDS CCA 90 bp AGGCGGCAAACTCCGCAATACCTATCTTCTCTCCTCCCTTCATCCTaGCTCTTTCTGAGTATCTGTCCAGATCTTTTTCAAGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RRQTPQYLSSLLPSS*LFLSICPDLFQAFL
Trigger: CAGAAAAGCTTGAAAAAGATCTGGACAGATACTCAGAAAGAGCCAGGATGAAGGGAGGAGAGAAGATAGGTATTGCGGAGTTTGCCGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
ENST00000626646.1
CDS-3UTR CAA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCATCGGGCCCTGCTCATTaGAACAATATCCAACCTCGG +
Preference number: 5 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPSGPAH*NNIQPR
Trigger: CCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGA...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CATGTGATGGGCCTTGTGGCATTATTCCATGCCCACTTGTGCTTCATTTCTGTCATGGCTTATTCACTATaGCCCACCTCCTATGGCATT +
Preference number: 5 (lower is better)
Translates to: HVMGLVALFHAHLCFISVMAYSL*PTSYGI
Trigger: AATGCCATAGGAGGTGGGCAATAGTGAATAAGCCAT...GACAGAAATGAAGCACAAGTGGGCATGGAATAATGCCACAAGGCCCATCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTATGCGCTCCGTACATCTaGAAAGCCAGCTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLCAPYI*KASWMV
Trigger: CACCATCCAGCTGGCTTTCAAGATGTACGGAGCGCA...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp GCTGCATGTTTCCTGAAGTACCTAAATGGAGTTTATAAAATACTCATGAGCTCCCTCCGGAGCGTCCCTTaGCCACCAAGACAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: AACFLKYLNGVYKILMSSLRSVP*PPRQLF
Trigger: AAAAAGCTGTCTTGGTGGCAAAGGGACGCTCCGGAG...GGAGCTCATGAGTATTTTATAAACTCCATTTAGGTACTTCAGGAAACATGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TCCCTTATTCCAGATATGGATATGTCTTTGCTGTCAGTGTTTCTGACAGCACCAGTACGTCTCTGGCTGTaGAATTCAGCTGTGACCACA +
Preference number: 5 (lower is better)
Translates to: SLIPDMDMSLLSVFLTAPVRLWL*NSAVTT
Trigger: TGTGGTCACAGCTGAATTCAACAGCCAGAGACGTAC...TGGTGCTGTCAGAAACACTGACAGCAAAGACATATCCATATCTGGAATAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTGTGATGGCTTATTCACTATaGCCCACCTCCTATGGCATT +
Preference number: 5 (lower is better)
Translates to: PSRTIHKLALEIGMEMSVMAYSL*PTSYGI
Trigger: AATGCCATAGGAGGTGGGCAATAGTGAATAAGCCAT...CACACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TACAGTGAAATGGATTACGTTATGCCGAAACAGAAACATCAAACTGCCAACGTTTCGGGCCCTGCTCATTaGAACAATATCCAACCTCGG +
Preference number: 5 (lower is better)
Translates to: YSEMDYVMPKQKHQTANVSGPAH*NNIQPR
Trigger: CCGAGGTTGGATATTGTTCAAATGAGCAGGGCCCGA...AACGTTGGCAGTTTGATGTTTCTGTTTCGGCATAACGTAATCCATTTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGCCGTACTTACTGGCCTaGGTGGTCACTTTCTATAGA +
Preference number: 5 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRPYLLA*VVTFYR
Trigger: TCTATAGAAAGTGACCACCAAGGCCAGTAAGTACGG...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAATTATTCCATGCCCACTaGTGCTTCATTTCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSELFHAH*CFISVC
Trigger: ACAGACAGAAATGAAGCACAAGTGGGCATGGAATAA...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAATGGTGTCCAGTTTATTaGGATATCGTAAAACCACAG +
Preference number: 5 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEWCPVY*DIVKPQ
Trigger: CTGTGGTTTTACGATATCCAAATAAACTGGACACCA...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGGAACTCGATTTCCACTaGGTTGTGAAACTGACACAG +
Preference number: 5 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRELDFH*VVKLTQ
Trigger: CTGTGTCAGTTTCACAACCAAGTGGAAATCGAGTTC...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS-3UTR CAA 90 bp AGGTTGTTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGTCTGCTGGGTGCTTATaGAGCTTCTTGGGTATCTTA +
Preference number: 5 (lower is better)
Translates to: RLFLNVCQWRNAYHESLRSAGCL*SFLGIL
Trigger: TAAGATACCCAAGAAGCTCAATAAGCACCCAGCAGA...CCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAACAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp GAGGGGAGTATCTCTTGGTTTCAGTTTCCCTTATTCCAGATATGGATATGTCTTATGAATGCACCAGGTTaGAAGGTAATTAGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: EGSISWFQFPLFQIWICLMNAPG*KVIRQV
Trigger: GACCTGCCTAATTACCTTCAAACCTGGTGCATTCAT...AAGACATATCCATATCTGGAATAAGGGAAACTGAAACCAAGAGATACTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp CCCTGCTCATTTGAACAATATCCAACCTCGGACTGGAGTTTAGGCTACAGTGAAGTTTCTGAAGAGAAGTaGGCTTTCATTCTTATCTCT +
Preference number: 5 (lower is better)
Translates to: PCSFEQYPTSDWSLGYSEVSEEK*AFILIS
Trigger: AGAGATAAGAATGAAAGCCAACTTCTCTTCAGAAAC...TTCACTGTAGCCTAAACTCCAGTCCGAGGTTGGATATTGTTCAAATGAGCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TTACCTAGTAGAACCATTCACAAACTGGCACTGGAAATAGGGATGGAGATGAGTTGGTGTCCAGTTTATTaGGATATCGTAAAACCACAG +
Preference number: 5 (lower is better)
Translates to: LPSRTIHKLALEIGMEMSWCPVY*DIVKPQ
Trigger: CTGTGGTTTTACGATATCCAAATAAACTGGACACCA...ACTCATCTCCATCCCTATTTCCAGTGCCAGTTTGTGAATGGTTCTACTAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAAAAATCTCATCTGGATaGGCTCTCCTCTCACAATGC +
Preference number: 5 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLKISSG*ALLSQC
Trigger: GCATTGTGAGAGGAGAGCCAATCCAGATGAGATTTT...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS-3UTR CAA 90 bp TTTTTAAATGTCTGTCAGTGGAGAAACGCGTATCACGAATCTCTGAGGAAGTTAGATATGGATATGTCTTaGCTGTCAGTGTTTCTGACA +
Preference number: 5 (lower is better)
Translates to: FLNVCQWRNAYHESLRKLDMDMS*LSVFLT
Trigger: TGTCAGAAACACTGACAGCAAAGACATATCCATATC...TAACTTCCTCAGAGATTCGTGATACGCGTTTCTCCACTGACAGACATTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475622.5
ENST00000625809.2
CDS GCA 72 bp GCGAGCGTGAGGATGGCCGCCTCGGTGGGCAGCGCCTaGCGCCCCTTCACGGCCACCCGGTGGAAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: ASVRMAASVGSA*RPFTATRWKPP
Trigger: CGGCGGCTTCCACCGGGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCACCGAGGCGGCCATCCTCACGCTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS CCA 72 bp GTGGCTGCCACTGGGAGGCCGCGGAAGGGTCCTGCCTaGGCCACGGGCGAGCGCGGCGCAAGCTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VAATGRPRKGPA*ATGERGASLGC
Trigger: GCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGACCCTTCCGCGGCCTCCCAGTGGCAGCCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS CCA 72 bp GTCCTGCCTGGGCCACGGGCGAGCGCGGCGCAAGCTTaGGCTGCAGAGTTCCCCCACGGCCCTCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: VLPGPRASAAQA*AAEFPHGPLPP
Trigger: CGGAGGCAGAGGGCCGTGGGGGAACTCTGCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS CAA 72 bp GGTCCTGCCTGGGCCACGGGCGAGCGCGGCGCAAGCTaGGGCTGCAGAGTTCCCCCACGGCCCTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GPAWATGERGAS*GCRVPPRPSAS
Trigger: GGAGGCAGAGGGCCGTGGGGGAACTCTGCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS GCA 72 bp GCCTGGGCCACGGGCGAGCGCGGCGCAAGCTTGGGCTaGAGAGTTCCCCCACGGCCCTCTGCCTCCGTGAGT +
Preference number: 6 (lower is better)
Translates to: AWATGERGASLG*RVPPRPSASVS
Trigger: ACTCACGGAGGCAGAGGGCCGTGGGGGAACTCTGCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS GCA 72 bp ATCTGTGGCTGCCACTGGGAGGCCGCGGAAGGGTCCTaGCTGGGCCACGGGCGAGCGCGGCGCAAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: ICGCHWEAAEGS*LGHGRARRKLG
Trigger: CCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGACCCTTCCGCGGCCTCCCAGTGGCAGCCACAGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS CAA 90 bp CCGCGGAAGGGTCCTGCCTGGGCCACGGGCGAGCGCGGCGCAAGCTaGGGCTGCAGAGTTCCCCCACGGCCCTCTGCCTCCGTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: PRKGPAWATGERGAS*GCRVPPRPSASVSA
Trigger: TGCACTCACGGAGGCAGAGGGCCGTGGGGGAACTCTGCAGCCCAAGCTTGCGCCGCGCTCGCCCGTGGCCCAGGCAGGACCCTTCCGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS TCA 72 bp GGATGGCGTCGAAGTAGGACGAGTGAGGCGCGAGCGTaGGGATGGCCGCCTCGGTGGGCAGCGCCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: GWRRSRTSEARA*GWPPRWAAPAA
Trigger: GGCGGCAGGCGCTGCCCACCGAGGCGGCCATCCTCACGCTCGCGCCTCACTCGTCCTACTTCGACGCCATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS CCA 72 bp GTGGGCAGCGCCTGCCGCCCCTTCACGGCCACCCGGTaGAAGCCGCCGGCGAACCACATGGTGCGCATGATG +
Preference number: 6 (lower is better)
Translates to: VGSACRPFTATR*KPPANHMVRMM
Trigger: CATCATGCGCACCATGTGGTTCGCCGGCGGCTTCCACCGGGTGGCCGTGAAGGGGCGGCAGGCGCTGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS GCA 72 bp AGGAAGTCCACAACCTTCCTCCACAGGGCCGGGGGCTaGTCGGGTTCCTTCTCCGCAGAGCCCAGGGATGCG +
Preference number: 6 (lower is better)
Translates to: RKSTTFLHRAGG*SGSFSAEPRDA
Trigger: CGCATCCCTGGGCTCTGCGGAGAAGGAACCCGAGCAGCCCCCGGCCCTGTGGAGGAAGGTTGTGGACTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
CDS GCA 72 bp CAGGACAGGTCACCTTCGCCGACGCTGCCGTCCTCTTaGGCTCCGTACATCTGTGGCTGCCACTGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: QDRSPSPTLPSS*APYICGCHWEA
Trigger: GGCCTCCCAGTGGCAGCCACAGATGTACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTGACCTGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS CAA 72 bp GCAGGACAGGTCACCTTCGCCGACGCTGCCGTCCTCTaGCGCTCCGTACATCTGTGGCTGCCACTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: AGQVTFADAAVL*RSVHLWLPLGG
Trigger: GCCTCCCAGTGGCAGCCACAGATGTACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTGACCTGTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS CCA 72 bp TGTCCACGCGGGAGGGGCCGCGTCTCTCCGCAACCCTaGGTCCTAATCCAGCTTCTTGCGAACAGGCTTCCG +
Preference number: 6 (lower is better)
Translates to: CPRGRGRVSPQP*VLIQLLANRLP
Trigger: CGGAAGCCTGTTCGCAAGAAGCTGGATTAGGACCCAGGGTTGCGGAGAGACGCGGCCCCTCCCGCGTGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
CDS CAA 72 bp GAGACACCCAAGGCCTCGGCCATGACTCGCCGCACGTaGCTGGCATACAGCGCGGGGTTCCTCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ETPKASAMTRRT*LAYSAGFLFSS
Trigger: GGAGGAGAAGAGGAACCCCGCGCTGTATGCCAGCAACGTGCGGCGAGTCATGGCCGAGGCCTTGGGTGTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS TCA 72 bp CCCGGTGGAAGCCGCCGGCGAACCACATGGTGCGCATaGTGGCCTTCAGCAGGAAGTCCACAACCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: PGGSRRRTTWCA*WPSAGSPQPSS
Trigger: GGAGGAAGGTTGTGGACTTCCTGCTGAAGGCCATCATGCGCACCATGTGGTTCGCCGGCGGCTTCCACCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
CDS CAA 90 bp TCAGTCACGGAGACACCCAAGGCCTCGGCCATGACTCGCCGCACGTaGCTGGCATACAGCGCGGGGTTCCTCTTCTCCTCCTCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: SVTETPKASAMTRRT*LAYSAGFLFSSSEG
Trigger: CCCTTCTGAGGAGGAGAAGAGGAACCCCGCGCTGTATGCCAGCAACGTGCGGCGAGTCATGGCCGAGGCCTTGGGTGTCTCCGTGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS TCA 72 bp TGGGCTGCAGAGTTCCCCCACGGCCCTCTGCCTCCGTaGGTGCAGGCTACAGCAGACGTGTTCACAAGCATC +
Preference number: 6 (lower is better)
Translates to: WAAEFPHGPLPP*VQATADVFTSI
Trigger: GATGCTTGTGAACACGTCTGCTGTAGCCTGCACTCACGGAGGCAGAGGGCCGTGGGGGAACTCTGCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503252.1
ENST00000626080.1
CDS GCA 72 bp CAGGACAGGTCACCTTCGCCGACGCTGCCGTCCTCTTaGGCTCCGTACATCTTGAAAGCCAGCTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: QDRSPSPTLPSS*APYILKASWMV
Trigger: CACCATCCAGCTGGCTTTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTGACCTGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
ENST00000626646.1
CDS CAA 72 bp GCAGGACAGGTCACCTTCGCCGACGCTGCCGTCCTCTaGCGCTCCGTACATCTTGAAAGCCAGCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: AGQVTFADAAVL*RSVHLESQLDG
Trigger: ACCATCCAGCTGGCTTTCAAGATGTACGGAGCGCAAGAGGACGGCAGCGTCGGCGAAGGTGACCTGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
ENST00000626646.1
CDS TCA 72 bp GAACAGGCTTCCGCCCAGCGTCTGAGTTTTCCGGGCTaGAATCGGCACAGAAGCCGTTTGGGATTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: EQASAQRLSFPG*NRHRSRLGLAQ
Trigger: CTGCGCCAATCCCAAACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAGCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS GCA 72 bp CGTCTCTCCGCAACCCTGGGTCCTAATCCAGCTTCTTaGGAACAGGCTTCCGCCCAGCGTCTGAGTTTTCCG +
Preference number: 6 (lower is better)
Translates to: RLSATLGPNPAS*EQASAQRLSFP
Trigger: CGGAAAACTCAGACGCTGGGCGGAAGCCTGTTCGCAAGAAGCTGGATTAGGACCCAGGGTTGCGGAGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
CDS TCA 72 bp ATCCAGCTTCTTGCGAACAGGCTTCCGCCCAGCGTCTaGGTTTTCCGGGCTGAAATCGGCACAGAAGCCGTT +
Preference number: 6 (lower is better)
Translates to: IQLLANRLPPSV*VFRAEIGTEAV
Trigger: AACGGCTTCTGTGCCGATTTCAGCCCGGAAAACTCAGACGCTGGGCGGAAGCCTGTTCGCAAGAAGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS TCA 72 bp GCAGGTGAGGTCTCTGCACAGCTTTCGAAATGTGTCTaGTCCGGGTACAGGTATTCCTCTGCGAAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: AGEVSAQLSKCV*SGYRYSSAKAG
Trigger: CCCTGCCTTCGCAGAGGAATACCTGTACCCGGATCAGACACATTTCGAAAGCTGTGCAGAGACCTCACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS TCA 72 bp CCTCGATTTCCACTTGGTTGTGAAACTGACACAGCGTaGGCCACAGGATTTCCAGCGCTCCAGGTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: PRFPLGCETDTA*ATGFPALQVLA
Trigger: GGCAAGGACCTGGAGCGCTGGAAATCCTGTGGCTCACGCTGTGTCAGTTTCACAACCAAGTGGAAATCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS CCA 72 bp TGCTCTCTGCCTTCATCACGATGGAGGACATCGTCATaGTCACAGGGATGGCGTCGAAGTAGGACGAGTGAG +
Preference number: 6 (lower is better)
Translates to: CSLPSSRWRTSS*SQGWRRSRTSE
Trigger: CTCACTCGTCCTACTTCGACGCCATCCCTGTGACCATGACGATGTCCTCCATCGTGATGAAGGCAGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
CDS CCA 72 bp AGATCGGGATGTCTCTGCTCTCTGCCTTCATCACGATaGAGGACATCGTCATGGTCACAGGGATGGCGTCGA +
Preference number: 6 (lower is better)
Translates to: RSGCLCSLPSSR*RTSSWSQGWRR
Trigger: TCGACGCCATCCCTGTGACCATGACGATGTCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS TCA 72 bp ACTCGATTTCCACTTGGTTGTGAAACTGACACAGCGTaGGCCACAGGATTTCCAGCGCTCCAGGTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: TRFPLGCETDTA*ATGFPALQVLA
Trigger: GGCAAGGACCTGGAGCGCTGGAAATCCTGTGGCTCACGCTGTGTCAGTTTCACAACCAAGTGGAAATCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000611696.3
ENST00000625809.2
CDS GCA 72 bp GATCAGAGTTCCCCAGATCGGGATGTCTCTGCTCTCTaGCTTCATCACGATGGAGGACATCGTCATGGTCAC +
Preference number: 6 (lower is better)
Translates to: DQSSPDRDVSAL*LHHDGGHRHGH
Trigger: GTGACCATGACGATGTCCTCCATCGTGATGAAGGCAGAGAGCAGAGACATCCCGATCTGGGGAACTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS GCA 72 bp AGCGTGAGCCACAGGATTTCCAGCGCTCCAGGTCCTTaGCACGTCCATGTGATGGTGTCCAGTTTATTTGGA +
Preference number: 6 (lower is better)
Translates to: SVSHRISSAPGP*HVHVMVSSLFG
Trigger: TCCAAATAAACTGGACACCATCACATGGACGTGGCAAGGACCTGGAGCGCTGGAAATCCTGTGGCTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000513757.5
ENST00000611696.3
ENST00000625809.2
ENST00000628540.1
CDS CCA 72 bp TGGAAGTCAGCGAATGTGATCTTCCCCTTCTCCTCTTaGTCAATGGCTCGGAATAGGTCGGTCACGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WKSANVIFPFSS*SMARNRSVTVS
Trigger: GCTCACCGTGACCGACCTATTCCGAGCCATTGACCAAGAGGAGAAGGGGAAGATCACATTCGCTGACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS TCA 72 bp GAAATCGGCACAGAAGCCGTTTGGGATTGGCGCAGGTaGGGTCTCTGCACAGCTTTCGAAATGTGTCTGATC +
Preference number: 6 (lower is better)
Translates to: EIGTEAVWDWRR*GLCTAFEMCLI
Trigger: GATCAGACACATTTCGAAAGCTGTGCAGAGACCTCACCTGCGCCAATCCCAAACGGCTTCTGTGCCGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS TCA 72 bp TCTGTGGCCACTTTCCGTTGGACTGCGCCCGTCTCTTaGTTTCTTCTACTGTTTTCCTGCGAGAATCCTGGT +
Preference number: 6 (lower is better)
Translates to: SVATFRWTAPVS*FLLLFSCENPG
Trigger: ACCAGGATTCTCGCAGGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTGGCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS CCA 72 bp GTGTCCAGTTTATTTGGATATCGTAAAACCACAGGCTaGACGGGCGCTCCAGGGATGAATGCACCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: VSSLFGYRKTTG*TGAPGMNAPGL
Trigger: CAAACCTGGTGCATTCATCCCTGGAGCGCCCGTCCAGCCTGTGGTTTTACGATATCCAAATAAACTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000513757.5
ENST00000611696.3
ENST00000625809.2
ENST00000628540.1
CDS TCA 72 bp CTCAACTGGGAACTTAGCTGGGTTTCTGCGGGTTCTTaGGTGTGTCAGCCACTACTGGACCCATTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LNWELSWVSAGS*VCQPLLDPFLS
Trigger: AGAAAGAAATGGGTCCAGTAGTGGCTGACACACTCAAGAACCCGCAGAAACCCAGCTAAGTTCCCAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514484.6
CDS TCA 72 bp CATCCTGGTGTAAGCTCGTGTCTGCATCAACCACTGTaGAGAGCGCTGTGTAACTCTGTATCCATACGAACC +
Preference number: 6 (lower is better)
Translates to: HPGVSSCLHQPL*RALCNSVSIRT
Trigger: GGTTCGTATGGATACAGAGTTACACAGCGCTCTTCACAGTGGTTGATGCAGACACGAGCTTACACCAGGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS GCA 72 bp GTACAGGTATTCCTCTGCGAAGGCAGGGTACATTTCTaGAAACCTGTGGAAGTCAGCGAATGTGATCTTCCC +
Preference number: 6 (lower is better)
Translates to: VQVFLCEGRVHF*KPVEVSECDLP
Trigger: GGGAAGATCACATTCGCTGACTTCCACAGGTTTGCAGAAATGTACCCTGCCTTCGCAGAGGAATACCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS CAA 90 bp AAAATCATTATCTGTGGCCACTTTCCGTTGGACTGCGCCCGTCTCTaGATTTCTTCTACTGTTTTCCTGCGAGAATCCTGGTCTGACCGG +
Preference number: 6 (lower is better)
Translates to: KIIICGHFPLDCARL*ISSTVFLRESWSDR
Trigger: CCGGTCAGACCAGGATTCTCGCAGGAAAACAGTAGAAGAAATCAAGAGACGGGCGCAGTCCAACGGAAAGTGGCCACAGATAATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS TCA 72 bp GATTTCTTCTACTGTTTTCCTGCGAGAATCCTGGTCTaGCCGGGACACGAACACAGGCCGTATATACTGGAT +
Preference number: 6 (lower is better)
Translates to: DFFYCFPARILV*PGHEHRPYILD
Trigger: ATCCAGTATATACGGCCTGTGTTCGTGTCCCGGTCAGACCAGGATTCTCGCAGGAAAACAGTAGAAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000507282.1
ENST00000513757.5
ENST00000514484.6
ENST00000611696.3
ENST00000625809.2
ENST00000627408.2
ENST00000627969.2
ENST00000628540.1
CDS TCA 72 bp GCCCTGAGAAACGGAAAGATGGGAAAGCAAGACAGGTaGTATGCCACATTGTACAAGGCTTATCTGGGCATC +
Preference number: 6 (lower is better)
Translates to: ALRNGKMGKQDR*YATLYKAYLGI
Trigger: GATGCCCAGATAAGCCTTGTACAATGTGGCATATCACCTGTCTTGCTTTCCCATCTTTCCGTTTCTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS GCA 72 bp TTCGAAATGTGTCTGATCCGGGTACAGGTATTCCTCTaGGAAGGCAGGGTACATTTCTGCAAACCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: FEMCLIRVQVFL*EGRVHFCKPVE
Trigger: TTCCACAGGTTTGCAGAAATGTACCCTGCCTTCGCAGAGGAATACCTGTACCCGGATCAGACACATTTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283415.4
ENST00000475622.5
ENST00000503252.1
ENST00000611696.3
ENST00000625809.2
ENST00000626080.1
ENST00000626646.1
CDS CCA 72 bp GAGTGTGTCAGCCACTACTGGACCCATTTCTTTCTTTaGGGAAGAAGGCTTTCTTGGCTTGAAAGACAGGCT +
Preference number: 6 (lower is better)
Translates to: ECVSHYWTHFFL*GRRLSWLERQA
Trigger: AGCCTGTCTTTCAAGCCAAGAAAGCCTTCTTCCCCAAAGAAAGAAATGGGTCCAGTAGTGGCTGACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514484.6
CDS CCA 72 bp GATATGCCACATTGTACAAGGCTTATCTGGGCATCCTaGTGTAAGCTCGTGTCTGCATCAACCACTGTGAAG +
Preference number: 6 (lower is better)
Translates to: DMPHCTRLIWAS*CKLVSASTTVK
Trigger: CTTCACAGTGGTTGATGCAGACACGAGCTTACACCAGGATGCCCAGATAAGCCTTGTACAATGTGGCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS CCA 72 bp AAGACAGGTGATATGCCACATTGTACAAGGCTTATCTaGGCATCCTGGTGTAAGCTCGTGTCTGCATCAACC +
Preference number: 6 (lower is better)
Translates to: KTGDMPHCTRLI*ASWCKLVSAST
Trigger: GGTTGATGCAGACACGAGCTTACACCAGGATGCCCAGATAAGCCTTGTACAATGTGGCATATCACCTGTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1
CDS GCA 72 bp GAGAAACGGAAAGATGGGAAAGCAAGACAGGTGATATaGCACATTGTACAAGGCTTATCTGGGCATCCTGGT +
Preference number: 6 (lower is better)
Translates to: EKRKDGKARQVI*HIVQGLSGHPG
Trigger: ACCAGGATGCCCAGATAAGCCTTGTACAATGTGGCATATCACCTGTCTTGCTTTCCCATCTTTCCGTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513757.5
ENST00000628540.1