RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LOX (Homo sapiens)

Ensembl gene IDs: ENSG00000113083

Ensembl transcript IDs: ENST00000231004.5, ENST00000503759.5, ENST00000505593.5, ENST00000508067.1, ENST00000513319.5, ENST00000639739.2

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATGTATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTaGCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCC +
Preference number: 1 (lower is better)
Translates to: GCITSVIKMTFQFHG*LMYTSPKNGDIKNP
Trigger: GGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR TCA 90 bp TTTAAATGCATTTTACCTCTGGATGTATCACATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGA +
Preference number: 1 (lower is better)
Translates to: FKCILPLDVSHQSSK*LSSFTAALCIPVPR
Trigger: TCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATACATCCAGAGGTAAAATGCATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR TCA 90 bp AAATTCTCAAAATTCTATTATGGCACATGGTTTCACAGTTTCAAATaGAATCACAGCTGTCTCATTACGCAGCACAGTCCTTGGTTTTGC +
Preference number: 1 (lower is better)
Translates to: KFSKFYYGTWFHSFK*NHSCLITQHSPWFC
Trigger: GCAAAACCAAGGACTGTGCTGCGTAATGAGACAGCTGTGATTTCATTTGAAACTGTGAAACCATGTGCCATAATAGAATTTTGAGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR GCA 90 bp ATATTTTTCCTTTGTTCACCAACCCCTCAAGTATGTAATACTATGTaGTTTGCTAATTTAGACTATATCTCAGACACACACACATGTGTG +
Preference number: 1 (lower is better)
Translates to: IFFLCSPTPQVCNTM*FANLDYISDTHTCV
Trigger: CACACATGTGTGTGTGTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGGTGAACAAAGGAAAAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGCAGAAACTTGCTTTGTaGCCTTCAGCCACTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWQKLAL*PSATLL
Trigger: GAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTTCTG...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR CCA 90 bp CTTATAGCACCTCCAGCTGTGTGTGTGCAGTACATGCAAATCGCCTGTGGTAGCAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCC +
Preference number: 2 (lower is better)
Translates to: LIAPPAVCVQYMQIACGSNILVG*VRNLMS
Trigger: GGACATCAGATTTCTTACCCAGCCGACCAAGATATT...GCTACCACAGGCGATTTGCATGTACTGCACACACACAGCTGGAGGTGCTATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508067.1
3UTR-3UTR GCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCCAATCCCTGTGTGTGTaGAGTACATGCAAATCGCCT +
Preference number: 2 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSQSLCV*STCKSP
Trigger: AGGCGATTTGCATGTACTGCACACACACAGGGATTG...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR TCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTCAGAACACCAGGCACTaGTTTATCCATTGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTQNTRH*FIHWEF
Trigger: AAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTG...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCCAGAACACCAGGCACTaGTTTATCCATTGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSQNTRH*FIHWEF
Trigger: AAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTG...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCACACACATGTGTGACTaGTTCCTGAATAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPTHMCD*FLNNPG
Trigger: TCCTGGGTTATTCAGGAATCAGTCACACATGTGTGT...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR GCA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAATGTGTGTGCAGTACATaGAAATCGCCTGTGGTAGCC +
Preference number: 2 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKCVCST*KSPVVA
Trigger: GGCTACCACAGGCGATTTGCATGTACTGCACACACA...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR GCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGTATGCACCCAGTGAGTaGAGAATGATTACTAGTAAT +
Preference number: 2 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWYAPSE*RMITSN
Trigger: ATTACTAGTAATCATTCTGCACTCACTGGGTGCATA...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGACACACATGTGTGACTaGTTCCTGAATAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLTHMCD*FLNNPG
Trigger: TCCTGGGTTATTCAGGAATCAGTCACACATGTGTGT...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 2 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTNIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR CCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCGTAATATCAATCCACTaGCAGTCTATGTCTGCACCA +
Preference number: 2 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGVISIH*QSMSAP
Trigger: TGGTGCAGACATAGACTGCCAGTGGATTGATATTAC...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR TCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGCATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCT +
Preference number: 2 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLHQSSK*LSSFTA
Trigger: AGCCGTGAAACTGGAAAGTCATTTTGATGACTGATG...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR GCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGCTGGCAGTCTATGTCTaGACCATAGGTATCATAACA +
Preference number: 2 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLLAVYV*TIGIIT
Trigger: TGTTATGATACCTATGGTGCAGACATAGACTGCCAG...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR CCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 2 (lower is better)
Translates to: LSSFTAALCIPVPRMVILNIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGTGTGTGACTGATTCCTaGATAACCCAGGATGATGTT +
Preference number: 2 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMCVTDS*ITQDDV
Trigger: AACATCATCCTGGGTTATTCAGGAATCAGTCACACA...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR GCA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCATTCCAGTTTCACGGCTaGCTTATGTATACCAGTCCC +
Preference number: 2 (lower is better)
Translates to: PTPQVCNTMCFANLDYISFQFHG*LMYTSP
Trigger: GGGACTGGTATACATAAGGCAGCCGTGAAACTGGAA...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 2 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNNIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR CCA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCAATGCATTTTACCTCTaGATGTATCACATCAGTCAT +
Preference number: 2 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPNAFYL*MYHISH
Trigger: ATGACTGATGTGATACATCCAGAGGTAAAATGCATT...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCAGCGCACAACATTGTTaGTATAGTCAGATTCAGGAA +
Preference number: 2 (lower is better)
Translates to: SFTAALCIPVPRMVILRISAQHC*YSQIQE
Trigger: TTCCTGAATCTGACTATACCAACAATGTTGTGCGCT...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR TCA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAAAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 2 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 2 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGACTTTACAATTCTATaGCATGTAATACAGGATGCC +
Preference number: 2 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLDFTIL*HVIQDA
Trigger: GGCATCCTGTATTACATGTCATAGAATTGTAAAGTC...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 2 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR TCA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACCATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCT +
Preference number: 2 (lower is better)
Translates to: TPQVCNTMCFANLDYISDHQSSK*LSSFTA
Trigger: AGCCGTGAAACTGGAAAGTCATTTTGATGACTGATG...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR CCA 72 bp GCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTaGTGGCTAAGGATCATATGTACCGCTATATCCGCC +
Preference number: 3 (lower is better)
Translates to: ALSVLSTGKLVP*WLRIICTAISA
Trigger: GGCGGATATAGCGGTACATATGATCCTTAGCCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp TTGTGCAGCCTGAGGCATACGCATGATGTCCTGTGTAGCGAATGTCACAGCGCAGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 3 (lower is better)
Translates to: LCSLRHTHDVLCSECHSAALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...TGCGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR CCA 72 bp CTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTaGCTAAGGATCATATGTACCGCTATATCCGCCAGT +
Preference number: 3 (lower is better)
Translates to: LSVLSTGKLVPW*LRIICTAISAS
Trigger: ACTGGCGGATATAGCGGTACATATGATCCTTAGCCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAAT +
Preference number: 3 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTIPRNI*VGWVRN
Trigger: ATTTCTTACCCAGCCGACCAAGATATTCCTGGGAAT...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR CAA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCTCTAATACGGTGAAATaGTGCAGCCTGAGGCATACG +
Preference number: 3 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGSNTVK*CSLRHT
Trigger: CGTATGCCTCAGGCTGCACAATTTCACCGTATTAGA...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR CAA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAACCAATGGTAATGTGTTaGTTTCTTTCTCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKPMVMC*FLSQHQ
Trigger: CTGGTGCTGAGAAAGAAACAAACACATTACCATTGG...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCATACCATGTGAGTACTaGGCATATATTAGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPIPCEY*AYIRPS
Trigger: TGAAGGCCTAATATATGCCAAGTACTCACATGGTAT...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTATTGGGAGTTTTGCTTaGCCTTCTAATACGGTGAAA +
Preference number: 3 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTIGSFA*PSNTVK
Trigger: TTTCACCGTATTAGAAGGCAAAGCAAAACTCCCAAT...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR CAA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCTATCCATTGGGAGTTTaGCTTTGCCTTCTAATACGG +
Preference number: 3 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGYPLGV*LCLLIR
Trigger: CCGTATTAGAAGGCAAAGCAAAACTCCCAATGGATA...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
3UTR-3UTR CAA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAAGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 3 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 3 (lower is better)
Translates to: SFTAALCIPVPRMVILRIALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGTACGCAGCACAGTCCTaGGTTTTGCAGAAAGTATAT +
Preference number: 3 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLYAAQS*VLQKVY
Trigger: ATATACTTTCTGCAAAACCAAGGACTGTGCTGCGTA...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 3 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
3UTR TCA 72 bp TCAGAGGTCAAGACATCTTTAACCCAGACTGTGGTCTaGATCATCATGAGATCGCTAATATGGCATATTGTA +
Preference number: 3 (lower is better)
Translates to: SEVKTSLTQTVV*IIMRSLIWHIV
Trigger: TACAATATGCCATATTAGCGATCTCATGATGATTCAGACCACAGTCTGGGTTAAAGATGTCTTGACCTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231004.5
3UTR-3UTR CAA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGAAGTATATTTTTCCTTaGTTCACCAACCCCTCAAGT +
Preference number: 3 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLKYIFP*FTNPSS
Trigger: ACTTGAGGGGTTGGTGAACAAAGGAAAAATATACTT...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR TCA 72 bp ATTTTACCTCTGGATGTATCACATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCTGCCTTATGTATACCA +
Preference number: 3 (lower is better)
Translates to: ILPLDVSHQSSK*LSSFTAALCIP
Trigger: TGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATACATCCAGAGGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR TCA 72 bp AAATTCTATTATGGCACATGGTTTCACAGTTTCAAATaGAATCACAGCTGTCTCATTACGCAGCACAGTCCT +
Preference number: 3 (lower is better)
Translates to: KFYYGTWFHSFK*NHSCLITQHSP
Trigger: AGGACTGTGCTGCGTAATGAGACAGCTGTGATTTCATTTGAAACTGTGAAACCATGTGCCATAATAGAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR TCA 72 bp CCCTCTAACCATGCTATGCACCCAGTGAGTGCAGAATaGTTACTAGTAATTGATGTTGACTTTACAATTCTA +
Preference number: 3 (lower is better)
Translates to: PSNHAMHPVSAE*LLVIDVDFTIL
Trigger: TAGAATTGTAAAGTCAACATCAATTACTAGTAATCATTCTGCACTCACTGGGTGCATAGCATGGTTAGAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
3UTR-3UTR CAA 90 bp CATAACAGCCAGGACTCAATCCAAGAGTCTGACATAAAACTATACTTATATTTCCATACTGTGGTAATGTaGATGACAACTGTGCCATTC +
Preference number: 3 (lower is better)
Translates to: HNSQDSIQESDIKLYLYFHTVVM*MTTVPF
Trigger: GAATGGCACAGTTGTCATCAACATTACCACAGTATG...GAAATATAAGTATAGTTTTATGTCAGACTCTTGGATTGAGTCCTGGCTGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508067.1
3UTR-3UTR CAA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAAAGTATATTTTTCCTTaGTTCACCAACCCCTCAAGT +
Preference number: 3 (lower is better)
Translates to: PTPQVCNTMCFANLDYISKYIFP*FTNPSS
Trigger: ACTTGAGGGGTTGGTGAACAAAGGAAAAATATACTT...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TTGTGCAGCCTGAGGCATACGCATGATGTCCTGTGTAGCGAATGTCACAGCGCAGGGTCCCGGCGGCGCTaGGGCTGGTACTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCSLRHTHDVLCSECHSAGSRRR*GWYCEP
Trigger: GGGCTCACAGTACCAGCCTCAGCGCCGCCGGGACCC...TGCGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CCA 90 bp TTGTGCAGCCTGAGGCATACGCATGATGTCCTGTGTAGCGAATGTCACAGCGCAGCTGGGCGGAGGCGTTaGCTGCACCAGGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: LCSLRHTHDVLCSECHSAAGRRR*LHQGRR
Trigger: CCGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGC...TGCGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR GCA 90 bp AAACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGACTAGCGCGCAGAGCTaGAAAGGCCCGAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLALWPSATLLWVLASSRTSAQS*KGPSRS
Trigger: GCTCCTGCTCGGGCCTTTGCAGCTCTGCGCGCTAGT...CCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR GCA 90 bp CATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTGGTCGTCGCCCACCATaGCGTCCACGCGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HSQEYLGRLGKKSDVPWFGRRPP*RPRGWA
Trigger: CGCCCAGCCGCGTGGACGGCATGGTGGGCGACGACC...AAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGGGAGTGCGGGGCTGCTaGGCGGAGGCGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWGVRGC*AEALAA
Trigger: TGCAGCCAACGCCTCCGCCCAGCAGCCCCGCACTCC...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTCCAGCTTGGAACCAGTaGCGGGCGGTGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPPAWNQ*RAVGLG
Trigger: CCCCAGGCCCACCGCCCGTCACTGGTTCCAAGCTGG...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTGGTCGTCGCCCACCATaGCGTCCACGCGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTGRRPP*RPRGWA
Trigger: CGCCCAGCCGCGTGGACGGCATGGTGGGCGACGACC...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTGCTGGGCGGAGGCGTTaGCTGCACCAGGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTAGRRR*LHQGRR
Trigger: CCGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGC...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCTGGGGCGGCCAGCGGTaGCTCCAGATGAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGWGGQR*LQMSRP
Trigger: CGGCCGGCTCATCTGGAGTCACCGCTGGCCGCCCCA...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGGTCCCGGCGGCGCTaGGGCTGGTACTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNGSRRR*GWYCEP
Trigger: GGGCTCACAGTACCAGCCTCAGCGCCGCCGGGACCC...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTAGCGGTGACTCCAGATaGGCCGGCCGTCCGCGTTCG +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTSGDSR*AGRPRS
Trigger: CGAACGCGGACGGCCGGCTCATCTGGAGTCACCGCT...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCGCGGGAGGGGCGCAGTaGACTAGCGCGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGAGGAQ*TSAQSC
Trigger: GCAGCTCTGCGCGCTAGTGCACTGCGCCCCTCCCGC...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTATCCGGGCCGGTACCTaGCCCCAGGTCTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HSQEYLGRLGKKSDVPWFIRAGT*PQVWAF
Trigger: AAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGAT...AAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTGCGGCTGCTCGGACGTaGCACCCTTCCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPAAART*HPSLSP
Trigger: AGGGGAAAGGGAAGGGTGCCACGTCCGAGCAGCCGC...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTATCTCCCGGCGCTGTCTaGTTCTCCGCGCGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILSPGAV*FSAREA
Trigger: CGCCTCGCGCGCGGAGAACCAGACAGCGCCGGGAGA...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGGTGACTCCAGATaGGCCGGCCGTCCGCGTTCG +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGSGDSR*AGRPRS
Trigger: CGAACGCGGACGGCCGGCTCATCTGGAGTCACCGCT...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGCGGCCGCAGGTTACTaGGCGCAGGAACTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSAAAGY*AQELLP
Trigger: CGGGAGAAGTTCCTGCGCTCAGTAACCTGCGGCCGC...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGCGGGAGGGGCGCAGTaGACTAGCGCGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLAGGAQ*TSAQSC
Trigger: GCAGCTCTGCGCGCTAGTGCACTGCGCCCCTCCCGC...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTATTCGCGCCGCGGCGGTaGGGTTGTCGCGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILFAPRR*GCRGSA
Trigger: TGCTGATCCGCGACAACCGCACCGCCGCGGCGCGAA...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCATCCGGGCCGGTACCTaGCCCCAGGTCTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSIRAGT*PQVWAF
Trigger: AAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGAT...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTGCCAGACGCGCGGTTTaGACTGGATTCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPARRAV*TGFQGC
Trigger: GCAGCCCTGGAATCCAGTGCAAACCGCGCGTCTGGC...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS-3UTR GCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTTTCGCCCACCGGGACTaGAGAGTGGAGCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPFAHRD*RVERRT
Trigger: TGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAA...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503759.5
ENST00000513319.5
CDS-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGAGTGCGGGGCTGCTaGGCGGAGGCGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNGVRGC*AEALAA
Trigger: TGCAGCCAACGCCTCCGCCCAGCAGCCCCGCACTCC...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCCCAGTCAAGGCGGCTaGTCGGACGTGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGPSQGG*SDVAPF
Trigger: GAAGGGTGCCACGTCCGAGCAGCCGCCTTGACTGGG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCTTCTCCCATTGGATCTaGTGGCGCCAGGCGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGFSHWI*WRQAPG
Trigger: TCCGGGCGCCTGGCGCCAGCAGATCCAATGGGAGAA...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGTTGTGTGTGCAGTACATaGAAATCGCCTGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NLLCGLQPLSSGCWHQAGCVCST*KSPVVA
Trigger: GGCTACCACAGGCGATTTGCATGTACTGCACACACA...ACCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCCCCCTTTCTCAGTCCTaGAAGGCAACGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSPLSQS*KATGSG
Trigger: GCCGCTCCCCGTTGCCTTCCAGGACTGAGAAAGGGG...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGCGGCTGCTCGGACGTaGCACCCTTCCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKAAART*HPSLSP
Trigger: AGGGGAAAGGGAAGGGTGCCACGTCCGAGCAGCCGC...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCTCCCATTGGATCTGCTaGCGCCAGGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRISHWIC*RQAPGA
Trigger: GGCTCCGGGCGCCTGGCGCCAGCAGATCCAATGGGA...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATTCCCATTGGATCTGCTaGCGCCAGGCGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNSHWIC*RQAPGA
Trigger: GGCTCCGGGCGCCTGGCGCCAGCAGATCCAATGGGA...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACTCTCCCGGCGCTGTCTaGTTCTCCGCGCGCGAGGCG +
Preference number: 4 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYSPGAV*FSAREA
Trigger: CGCCTCGCGCGCGGAGAACCAGACAGCGCCGGGAGA...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACTGGGGCGGCCAGCGGTaGCTCCAGATGAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: TPQVCNTMCFANLDYISDWGGQR*LQMSRP
Trigger: CGGCCGGCTCATCTGGAGTCACCGCTGGCCGCCCCA...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACGCGGCCGCAGGTTACTaGGCGCAGGAACTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDAAAGY*AQELLP
Trigger: CGGGAGAAGTTCCTGCGCTCAGTAACCTGCGGCCGC...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGCCCAGTCAAGGCGGCTaGTCGGACGTGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLPSQGG*SDVAPF
Trigger: GAAGGGTGCCACGTCCGAGCAGCCGCCTTGACTGGG...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGATCCGGGCCGGTACCTaGCCCCAGGTCTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLIRAGT*PQVWAF
Trigger: AAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGAT...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GTCATAGTGGCTAAACTCATCCATACTGTGGTAATGTTGATGACAACTGTGCCACTCCTTTTGCCAGATTaGCCCCGCTCGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: VIVAKLIHTVVMLMTTVPLLLPD*PRSRRT
Trigger: CGTCCTCCTCGAGCGGGGTCAATCTGGCAAAAGGAG...TGGCACAGTTGTCATCAACATTACCACAGTATGGATGAGTTTAGCCACTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR TCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCTGAGGCTGGTACTGTaGGCCCAGGCTCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGLRLVL*AQAQQA
Trigger: AGCTTGCTGAGCCTGGGCTCACAGTACCAGCCTCAG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCACCAGCTTGGAACCAGTaGCGGGCGGTGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTPQVCNTMCFANLDYISPAWNQ*RAVGLG
Trigger: CCCCAGGCCCACCGCCCGTCACTGGTTCCAAGCTGG...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGTTGTGATCATAATCTCTaGCATCTGCCCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: NLLCGLQPLSSGCWHQAGCDHNL*HLPCML
Trigger: CAGCATACAGGGCAGATGTCAGAGATTATGATCACA...ACCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR TCA 90 bp AAACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGACACACATGTGTGACTaGTTCCTGAATAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: KLALWPSATLLWVLASSRTHMCD*FLNNPG
Trigger: TCCTGGGTTATTCAGGAATCAGTCACACATGTGTGT...CCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR GCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGGTCTCCACCAAGCAATaGCAAGGGTGGGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWVSTKQ*QGWDSD
Trigger: GTCTGAATCCCACCCTTGGCATTGCTTGGTGGAGAC...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGTTCTCCCATTGGATCTaGTGGCGCCAGGCGCCCGGA +
Preference number: 4 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLFSHWI*WRQAPG
Trigger: TCCGGGCGCCTGGCGCCAGCAGATCCAATGGGAGAA...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp GTCATAGTGGCTAAACTCATCCATACTGTGGTAATGTTGATGACAACTGTGCCAACTGGAAGTAGCCAGTaGCGTATCCGGGCCGGTACC +
Preference number: 4 (lower is better)
Translates to: VIVAKLIHTVVMLMTTVPTGSSQ*RIRAGT
Trigger: GGTACCGGCCCGGATACGGCACTGGCTACTTCCAGT...TGGCACAGTTGTCATCAACATTACCACAGTATGGATGAGTTTAGCCACTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR GCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACTTCGCCCACCGGGACTaGAGAGTGGAGCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDFAHRD*RVERRT
Trigger: TGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAA...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503759.5
ENST00000513319.5
CDS-3UTR CCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACCCCCTTTCTCAGTCCTaGAAGGCAACGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDPLSQS*KATGSG
Trigger: GCCGCTCCCCGTTGCCTTCCAGGACTGAGAAAGGGG...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATTTACACAAGCCGTTCTaGCCCGGCCGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNLHKPF*PGRPSA
Trigger: AGCTGAGGGGCGGCCGGGCCAGAACGGCTTGTGTAA...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR TCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATCTCCTTTTGCCAGATTaGCCCCGCTCGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNLLLPD*PRSRRT
Trigger: CGTCCTCCTCGAGCGGGGTCAATCTGGCAAAAGGAG...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TTGTGCAGCCTGAGGCATACGCATGATGTCCTGTGTAGCGAATGTCACAGCGCATGTGTGACTGATTCCTaGATAACCCAGGATGATGTT +
Preference number: 4 (lower is better)
Translates to: LCSLRHTHDVLCSECHSACVTDS*ITQDDV
Trigger: AACATCATCCTGGGTTATTCAGGAATCAGTCACACA...TGCGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR GCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCACTGGAAGTAGCCAGTaGCGTATCCGGGCCGGTACC +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRITGSSQ*RIRAGT
Trigger: GGTACCGGCCCGGATACGGCACTGGCTACTTCCAGT...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GCTGTGTGTGTGCAGTACATGCAAATCGCCTGTGGTAGCCATAGTCACAGGATGTGGTTTTTCACTCTTTaGGGAAATCTGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: AVCVQYMQIACGSHSHRMWFFTL*GNLSST
Trigger: GGTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCA...CATCCTGTGACTATGGCTACCACAGGCGATTTGCATGTACTGCACACACACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR CCA 90 bp AAACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: KLALWPSATLLWVLASSRNILVG*VRNLMS
Trigger: GGACATCAGATTTCTTACCCAGCCGACCAAGATATT...CCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CCA 90 bp AACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGTAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: NLLCGLQPLSSGCWHQAGNILVG*VRNLMS
Trigger: GGACATCAGATTTCTTACCCAGCCGACCAAGATATT...ACCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACACCGGGACTGCAGAGTaGAGCGGAGGACAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDTGTAE*SGGQQE
Trigger: CTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGT...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503759.5
ENST00000513319.5
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCGCGCATCACTCCTTTTaGCAGATTGACCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGAHHSF*QIDPAR
Trigger: TCGAGCGGGGTCAATCTGGCAAAAGGAGTGATGCGC...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTACATGGACATCTTCTaGACGTACGTGGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPYMDIF*TYVDAW
Trigger: CCAGGCGTCCACGTACGTGCAGAAGATGTCCATGTA...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR GCA 90 bp AATGTTGATGACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTGGGTAAGATGTGTGTGCAGTACATaGAAATCGCCTGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NVDDNCAIPRNILVGWVRCVCST*KSPVVA
Trigger: GGCTACCACAGGCGATTTGCATGTACTGCACACACA...TCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTCATCAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR GCA 90 bp GTCATAGTGGCTAAACTCATCCATACTGTGGTAATGTTGATGACAACTGTGCCAATGCGATTGGAAACGTaGAAGGCGGACAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VIVAKLIHTVVMLMTTVPMRLET*KADSSS
Trigger: CGAGGAGCTGTCCGCCTTGCACGTTTCCAATCGCAT...TGGCACAGTTGTCATCAACATTACCACAGTATGGATGAGTTTAGCCACTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCAAGCAATGCCAAGGGTaGGATTCAGACCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGKQCQG*DSDPSP
Trigger: TGGGGAAGGGTCTGAATCCCACCCTTGGCATTGCTT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCCCCTGTATGCTGTACTaGCCAGACAGTTTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPPCMLY*PDSFPP
Trigger: CGGAGGAAAACTGTCTGGCCAGTACAGCATACAGGG...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CCA 90 bp AACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGTAAATCTGATGTCCCTTaGTTTTTCACTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NLLCGLQPLSSGCWHQAGKSDVP*FFTLWG
Trigger: TCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTT...ACCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CCA 90 bp GCTGTGTGTGTGCAGTACATGCAAATCGCCTGTGGTAGCCATAGTCACAGGATGGTAATATCAATCCACTaGCAGTCTATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: AVCVQYMQIACGSHSHRMVISIH*QSMSAP
Trigger: TGGTGCAGACATAGACTGCCAGTGGATTGATATTAC...CATCCTGTGACTATGGCTACCACAGGCGATTTGCATGTACTGCACACACACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR CCA 90 bp AAACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGAGCGCACAACATTGTTaGTATAGTCAGATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KLALWPSATLLWVLASSRSAQHC*YSQIQE
Trigger: TTCCTGAATCTGACTATACCAACAATGTTGTGCGCT...CCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CCA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACACCGGGACTGCAGAGTaGAGCGGAGGACAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYTGTAE*SGGQQE
Trigger: CTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGT...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513319.5
CDS-3UTR TCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGGGGCTCAAATCACGTaGGGGAAGGAGAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSGAQIT*GKEKSS
Trigger: TGAAGATTTCTCCTTCCCTCACGTGATTTGAGCCCC...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GTATTTATTACTCAGCCTTATAGCACCTCCAGCTGTGTGTGTGCAGTACATGCACTCTTTGGGGAAATCTaGGCAGCACCCTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: VFITQPYSTSSCVCAVHALFGEI*AAPCDH
Trigger: ATGATCACAGGGTGCTGCTCAGATTTCCCCAAAGAG...TGCATGTACTGCACACACACAGCTGGAGGTGCTATAAGGCTGAGTAATAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR TCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGACACACATGTGTGACTaGTTCCTGAATAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWTHMCD*FLNNPG
Trigger: TCCTGGGTTATTCAGGAATCAGTCACACATGTGTGT...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGTCCAGTGAGTGCAGAATaGTTACTAGTAATTGATGTT +
Preference number: 4 (lower is better)
Translates to: NLLCGLQPLSSGCWHQAGPVSAE*LLVIDV
Trigger: AACATCAATTACTAGTAATCATTCTGCACTCACTGG...ACCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR GCA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACACTAGCGCGCAGAGCTaGAAAGGCCCGAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TPQVCNTMCFANLDYISDTSAQS*KGPSRS
Trigger: GCTCCTGCTCGGGCCTTTGCAGCTCTGCGCGCTAGT...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCTACATGGACATCTTCTaGACGTACGTGGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGYMDIF*TYVDAW
Trigger: CCAGGCGTCCACGTACGTGCAGAAGATGTCCATGTA...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR GCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGACATCTGCCCTGTATaGTGTACTGGCCAGACAGTT +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSDICPV*CTGQTV
Trigger: AACTGTCTGGCCAGTACAGCATACAGGGCAGATGTC...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR GCA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGTGTGTGCAGTACATaGAAATCGCCTGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPCVCST*KSPVVA
Trigger: GGCTACCACAGGCGATTTGCATGTACTGCACACACA...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AAGTATTTATTACTCAGCCTTATAGCACCTCCAGCTGTGTGTGTGCAGTACATGACCTGCCCCCAGGTCTaGGCCTTTCATAAGTATCGT +
Preference number: 4 (lower is better)
Translates to: KYLLLSLIAPPAVCVQYMTCPQV*AFHKYR
Trigger: ACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGT...CATGTACTGCACACACACAGCTGGAGGTGCTATAAGGCTGAGTAATAAATACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR CCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCCCTGTATGCTGTACTaGCCAGACAGTTTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGPCMLY*PDSFPP
Trigger: CGGAGGAAAACTGTCTGGCCAGTACAGCATACAGGG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR CCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCCAGAAACTTGCTTTGTaGCCTTCAGCCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGQKLAL*PSATLL
Trigger: GAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTTCTG...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTCAGAAACTTGCTTTGTaGCCTTCAGCCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTQKLAL*PSATLL
Trigger: GAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTTCTG...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATAGAGCGGGCAGTGTCTaGAGTGAAGGAAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNRAGSV*SEGRRR
Trigger: TCTCCTCCTTCCTTCACTCCAGACACTGCCCGCTCT...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR TCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTACCCAGACTGTGGTCTaGATCATCATGAGATCGCTA +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTTQTVV*IIMRSL
Trigger: TAGCGATCTCATGATGATTCAGACCACAGTCTGGGT...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR GCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCGTCTCCACCAAGCAATaGCAAGGGTGGGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRIVSTKQ*QGWDSD
Trigger: GTCTGAATCCCACCCTTGGCATTGCTTGGTGGAGAC...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AACAGCCAGGACTCAATCCAAGAGTCTGACATAAAACTATACTTATATTTCATCACTGGAAGTAGCCAGTaGCGTATCCGGGCCGGTACC +
Preference number: 4 (lower is better)
Translates to: NSQDSIQESDIKLYLYFITGSSQ*RIRAGT
Trigger: GGTACCGGCCCGGATACGGCACTGGCTACTTCCAGT...GATGAAATATAAGTATAGTTTTATGTCAGACTCTTGGATTGAGTCCTGGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCGACATCTGCCCTGTATaGTGTACTGGCCAGACAGTT +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGDICPV*CTGQTV
Trigger: AACTGTCTGGCCAGTACAGCATACAGGGCAGATGTC...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCTGTGTGTGCAGTACATaGAAATCGCCTGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGCVCST*KSPVVA
Trigger: GGCTACCACAGGCGATTTGCATGTACTGCACACACA...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGATAATCTCTGACATCTaGCCTGTATGCTGTACGTAC +
Preference number: 4 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWIISDI*PVCCTY
Trigger: GTACGTACAGCATACAGGGCAGATGTCAGAGATTAT...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CCA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAAACCTGCCCCCAGGTCTaGGCCTTTCATAAGTATCGT +
Preference number: 4 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKTCPQV*AFHKYR
Trigger: ACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGT...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGACCTGCCCCCAGGTCTaGGCCTTTCATAAGTATCGT +
Preference number: 4 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLTCPQV*AFHKYR
Trigger: ACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGT...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAATCTTCTGCACGTACGTaGACGCCTGGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKSSART*TPGCSR
Trigger: CCTACTACATCCAGGCGTCCACGTACGTGCAGAAGA...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CCA 90 bp GTCATAGTGGCTAAACTCATCCATACTGTGGTAATGTTGATGACAACTGTGCCACAGAAACTTGCTTTGTaGCCTTCAGCCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VIVAKLIHTVVMLMTTVPQKLAL*PSATLL
Trigger: GAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTTCTG...TGGCACAGTTGTCATCAACATTACCACAGTATGGATGAGTTTAGCCACTATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTACAGAAACTTGCTTTGTaGCCTTCAGCCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILQKLAL*PSATLL
Trigger: GAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTTCTG...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
3UTR CAA 72 bp AATGTTGATGACAACTGTGCCATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NVDDNCAIPRNI*VGWVRNLMSLG
Trigger: ACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTCATCAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR TCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCTGTGATCATAATCTCTaGCATCTGCCCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGCDHNL*HLPCML
Trigger: CAGCATACAGGGCAGATGTCAGAGATTATGATCACA...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATCTCTTTGGGGAAATCTaGGCAGCACCCTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNLFGEI*AAPCDH
Trigger: ATGATCACAGGGTGCTGCTCAGATTTCCCCAAAGAG...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACCTCTTTGGGGAAATCTaGGCAGCACCCTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDLFGEI*AAPCDH
Trigger: ATGATCACAGGGTGCTGCTCAGATTTCCCCAAAGAG...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGCTCTTTGGGGAAATCTaGGCAGCACCCTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLLFGEI*AAPCDH
Trigger: ATGATCACAGGGTGCTGCTCAGATTTCCCCAAAGAG...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTAGCTGGGGTTTACACTaGCCTTTAGGATATAGTTTC +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPSWGLH*PLGYSF
Trigger: GAAACTATATCCTAAAGGTCAGTGTAAACCCCAGCT...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTCATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: HSQEYLGRLGKKSDVPWFHQSSK*LSSFTA
Trigger: AGCCGTGAAACTGGAAAGTCATTTTGATGACTGATG...AAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR GCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGTGTGTGTGCAGTACATaGAAATCGCCTGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLCVCST*KSPVVA
Trigger: GGCTACCACAGGCGATTTGCATGTACTGCACACACA...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTACAATCCCTGTGTGTGTaGAGTACATGCAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILQSLCV*STCKSP
Trigger: AGGCGATTTGCATGTACTGCACACACACAGGGATTG...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCAATCCCTGTGTGTGTaGAGTACATGCAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGQSLCV*STCKSP
Trigger: AGGCGATTTGCATGTACTGCACACACACAGGGATTG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTCTGGCAGTCTATGTCTaGACCATAGGTATCATAACA +
Preference number: 4 (lower is better)
Translates to: HSQEYLGRLGKKSDVPWFLAVYV*TIGIIT
Trigger: TGTTATGATACCTATGGTGCAGACATAGACTGCCAG...AAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR GCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTACTTTCTGGCACGTTTaGAAAGTTACACAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPTFWHV*KVTQAV
Trigger: AACGGCTTGTGTAACTTTGCAAACGTGCCAGAAAGT...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCGCTCGAGGAGGACGTaGCTCACAGAAAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGRSRRT*LTENKN
Trigger: GTTTTTATTTTCTGTGAGCCACGTCCTCCTCGAGCG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGTCGGCCACCAGGTCTaGGAGACCGTACTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PTPQVCNTMCFANLDYISVGHQV*ETVLEV
Trigger: TACTTCCAGTACGGTCTCCCAGACCTGGTGGCCGAC...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGTCTTCTGCACGTACGTaGACGCCTGGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMSSART*TPGCSR
Trigger: CCTACTACATCCAGGCGTCCACGTACGTGCAGAAGA...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR CCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCATCTCAGGTTGTACATaGACATCTTCTGCACGTACG +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSISGCT*TSSART
Trigger: CGTACGTGCAGAAGATGTCCATGTACAACCTGAGAT...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR CCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTGTAATATCAATCCACTaGCAGTCTATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPVISIH*QSMSAP
Trigger: TGGTGCAGACATAGACTGCCAGTGGATTGATATTAC...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAAAGCTTGTGCCCTGGTaGCTAAGGATCATATGTACC +
Preference number: 4 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKKLVPW*LRIICT
Trigger: GGTACATATGATCCTTAGCCACCAGGGCACAAGCTT...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGGGGGCTCAAATCACGTaGGGGAAGGAGAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMGAQIT*GKEKSS
Trigger: TGAAGATTTCTCCTTCCCTCACGTGATTTGAGCCCC...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGCTCTTTGGGGAAATCTaGGCAGCACCCTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMLFGEI*AAPCDH
Trigger: ATGATCACAGGGTGCTGCTCAGATTTCCCCAAAGAG...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCAGCTGGGGTTTACACTaGCCTTTAGGATATAGTTTC +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSSWGLH*PLGYSF
Trigger: GAAACTATATCCTAAAGGTCAGTGTAAACCCCAGCT...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTACAGAACACCAGGCACTaGTTTATCCATTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILQNTRH*FIHWEF
Trigger: AAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTG...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCAGAACACCAGGCACTaGTTTATCCATTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGQNTRH*FIHWEF
Trigger: AAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 4 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCCATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGHQSSK*LSSFTA
Trigger: AGCCGTGAAACTGGAAAGTCATTTTGATGACTGATG...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGCAATCCCTGTGTGTGTaGAGTACATGCAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLQSLCV*STCKSP
Trigger: AGGCGATTTGCATGTACTGCACACACACAGGGATTG...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGTTCCAGTTTCACGGCTaGCTTATGTATACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLFQFHG*LMYTSP
Trigger: GGGACTGGTATACATAAGGCAGCCGTGAAACTGGAA...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCTTCCAGTTTCACGGCTaGCTTATGTATACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRIFQFHG*LMYTSP
Trigger: GGGACTGGTATACATAAGGCAGCCGTGAAACTGGAA...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCGCTCGAGGAGGACGTaGCTCACAGAAAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRIRSRRT*LTENKN
Trigger: GTTTTTATTTTCTGTGAGCCACGTCCTCCTCGAGCG...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAATCTCAGGTTGTACATaGACATCTTCTGCACGTACG +
Preference number: 4 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKISGCT*TSSART
Trigger: CGTACGTGCAGAAGATGTCCATGTACAACCTGAGAT...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCGTAATATCAATCCACTaGCAGTCTATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGVISIH*QSMSAP
Trigger: TGGTGCAGACATAGACTGCCAGTGGATTGATATTAC...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAAAAGCTTGTGCCCTGGTaGCTAAGGATCATATGTACC +
Preference number: 4 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKKLVPW*LRIICT
Trigger: GGTACATATGATCCTTAGCCACCAGGGCACAAGCTT...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTAAGCTTGTGCCCTaGTGGCTAAGGATCATATGT +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNGKLVP*WLRIIC
Trigger: ACATATGATCCTTAGCCACCAGGGCACAAGCTTACC...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATTGTGATCATAATCTCTaGCATCTGCCCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNCDHNL*HLPCML
Trigger: CAGCATACAGGGCAGATGTCAGAGATTATGATCACA...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGCTGGGGTTTACACTaGCCTTTAGGATATAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILSWGLH*PLGYSF
Trigger: GAAACTATATCCTAAAGGTCAGTGTAAACCCCAGCT...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGCAGAACACCAGGCACTaGTTTATCCATTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLQNTRH*FIHWEF
Trigger: AAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTG...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTCCAGTGAGTGCAGAATaGTTACTAGTAATTGATGTT +
Preference number: 4 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPPVSAE*LLVIDV
Trigger: AACATCAATTACTAGTAATCATTCTGCACTCACTGG...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGATAATCTCTGACATCTaGCCTGTATGCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLIISDI*PVCCTG
Trigger: GCCAGTACAGCATACAGGGCAGATGTCAGAGATTAT...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR GCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCCTGGCAGTCTATGTCTaGACCATAGGTATCATAACA +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGLAVYV*TIGIIT
Trigger: TGTTATGATACCTATGGTGCAGACATAGACTGCCAG...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAACTGGCAGTCTATGTCTaGACCATAGGTATCATAACA +
Preference number: 4 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKLAVYV*TIGIIT
Trigger: TGTTATGATACCTATGGTGCAGACATAGACTGCCAG...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGACATGTAATACAGGATaGCGAGGCACTTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWTCNTG*RGTFKI
Trigger: AATTTTAAAAGTGCCTCGGCATCCTGTATTACATGT...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp AAGTATTTATTACTCAGCCTTATAGCACCTCCAGCTGTGTGTGTGCAGTACATGATAATCTCTGACATCTaGCCTGTATGCTGTACGTAC +
Preference number: 4 (lower is better)
Translates to: KYLLLSLIAPPAVCVQYMIISDI*PVCCTY
Trigger: GTACGTACAGCATACAGGGCAGATGTCAGAGATTAT...CATGTACTGCACACACACAGCTGGAGGTGCTATAAGGCTGAGTAATAAATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR CCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCAAATCTGATGTCCCTTaGTTTTTCACTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGKSDVP*FFTLWG
Trigger: TCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCAGCGCACAACATTGTTaGTATAGTCAGATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSSAQHC*YSQIQE
Trigger: TTCCTGAATCTGACTATACCAACAATGTTGTGCGCT...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCACGCAGCACAGTCCTTaGTTTTGCAGAAAGTATATT +
Preference number: 4 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPTQHSP*FCRKYI
Trigger: AATATACTTTCTGCAAAACCAAGGACTGTGCTGCGT...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGTGTGATCATAATCTCTaGCATCTGCCCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMCDHNL*HLPCML
Trigger: CAGCATACAGGGCAGATGTCAGAGATTATGATCACA...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACTGTGATCATAATCTCTaGCATCTGCCCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYCDHNL*HLPCML
Trigger: CAGCATACAGGGCAGATGTCAGAGATTATGATCACA...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCTGTGTGACTGATTCCTaGATAACCCAGGATGATGTT +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRICVTDS*ITQDDV
Trigger: AACATCATCCTGGGTTATTCAGGAATCAGTCACACA...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR TCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTGACTTTACAATTCTATaGCATGTAATACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTDFTIL*HVIQDA
Trigger: GGCATCCTGTATTACATGTCATAGAATTGTAAAGTC...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACATAATCTCTGACATCTaGCCTGTATGCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYIISDI*PVCCTG
Trigger: GCCAGTACAGCATACAGGGCAGATGTCAGAGATTAT...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR GCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACCTGGCAGTCTATGTCTaGACCATAGGTATCATAACA +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDLAVYV*TIGIIT
Trigger: TGTTATGATACCTATGGTGCAGACATAGACTGCCAG...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCCCACTTATGCACCCAGTGAGTaGAGAATGATTACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: HGCLMYTSPKNGDIKNPTYAPSE*RMITSN
Trigger: ATTACTAGTAATCATTCTGCACTCACTGGGTGCATA...AGTGGGATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CATAACAGCCAGGACTCAATCCAAGAGTCTGACATAAAACTATACTTATATTTCCTCCAGCTGTGTGTGTaGAGTACATGCAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: HNSQDSIQESDIKLYLYFLQLCV*STCKSP
Trigger: AGGCGATTTGCATGTACTGCACACACACAGCTGGAG...GAAATATAAGTATAGTTTTATGTCAGACTCTTGGATTGAGTCCTGGCTGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR GCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACATAATCTCTGACATCTaGCCTGTATGCTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDIISDI*PVCCTF
Trigger: GAAGGTACAGCATACAGGGCAGATGTCAGAGATTAT...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513319.5
CDS-3UTR CCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGTGGTTTTTCACTCTTTaGGGAAATCTGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMWFFTL*GNLSST
Trigger: GGTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCA...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACTGGTTTTTCACTCTTTaGGGAAATCTGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYWFFTL*GNLSST
Trigger: GGTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCA...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCGTAATATCAATCCACTaGCAGTCTATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRIVISIH*QSMSAP
Trigger: TGGTGCAGACATAGACTGCCAGTGGATTGATATTAC...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAAGCGCACAACATTGTTaGTATAGTCAGATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKSAQHC*YSQIQE
Trigger: TTCCTGAATCTGACTATACCAACAATGTTGTGCGCT...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGCACAACATTGTTaGTATAGTCAGATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGSAQHC*YSQIQE
Trigger: TTCCTGAATCTGACTATACCAACAATGTTGTGCGCT...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 4 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKNIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp GTCATAGTGGCTAAACTCATCCATACTGTGGTAATGTTGATGACAACTGTGCCAAGGGATGTAACTATCTaGGTACATGTATTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VIVAKLIHTVVMLMTTVPRDVTI*VHVLPF
Trigger: AAATGGCAATACATGTACTCAGATAGTTACATCCCT...TGGCACAGTTGTCATCAACATTACCACAGTATGGATGAGTTTAGCCACTATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR TCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGCATCAGTCATCAAAATaGCTTTCCAGTTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMHQSSK*LSSFTA
Trigger: AGCCGTGAAACTGGAAAGTCATTTTGATGACTGATG...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR TCA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCGACTTTACAATTCTATaGCATGTAATACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGDFTIL*HVIQDA
Trigger: GGCATCCTGTATTACATGTCATAGAATTGTAAAGTC...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCACAATCCCTGTGTGTGTaGAGTACATGCAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: PTPQVCNTMCFANLDYISQSLCV*STCKSP
Trigger: AGGCGATTTGCATGTACTGCACACACACAGGGATTG...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGCTGGCAGTCTATGTCTaGACCATAGGTATCATAACA +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMLAVYV*TIGIIT
Trigger: TGTTATGATACCTATGGTGCAGACATAGACTGCCAG...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATAAATCTGATGTCCCTTaGTTTTTCACTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: IKMTFQFHGCLMYTSPKNKSDVP*FFTLWG
Trigger: TCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTT...ATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGAAATCTGATGTCCCTTaGTTTTTCACTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLKSDVP*FFTLWG
Trigger: TCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTT...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMNILVG*VRNLMS
Trigger: GGACATCAGATTTCTTACCCAGCCGACCAAGATATT...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGGTAATATCAATCCACTaGCAGTCTATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMVISIH*QSMSAP
Trigger: TGGTGCAGACATAGACTGCCAGTGGATTGATATTAC...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 4 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLNIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRINIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAAAATATCAGACAGGATTaGGCAGCTCCCTTACTTAAT +
Preference number: 4 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKNIRQD*AAPLLN
Trigger: ATTAAGTAAGGGAGCTGCCCAATCCTGTCTGATATT...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCAATGCATTTTACCTCTaGATGTATCACATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGNAFYL*MYHISH
Trigger: ATGACTGATGTGATACATCCAGAGGTAAAATGCATT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACACGCAGCACAGTCCTTaGTTTTGCAGAAAGTATATT +
Preference number: 4 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDTQHSP*FCRKYI
Trigger: AATATACTTTCTGCAAAACCAAGGACTGTGCTGCGT...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACGGTAAGCTTGTGCCCTaGTGGCTAAGGATCATATGT +
Preference number: 4 (lower is better)
Translates to: TPQVCNTMCFANLDYISDGKLVP*WLRIIC
Trigger: ACATATGATCCTTAGCCACCAGGGCACAAGCTTACC...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAACATGTAATACAGGATaGCGAGGCACTTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: LSSFTAALCIPVPRMVILTCNTG*RGTFKI
Trigger: AATTTTAAAAGTGCCTCGGCATCCTGTATTACATGT...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR GCA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGTATGCACCCAGTGAGTaGAGAATGATTACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLYAPSE*RMITSN
Trigger: ATTACTAGTAATCATTCTGCACTCACTGGGTGCATA...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: TPQVCNTMCFANLDYISDNILVG*VRNLMS
Trigger: GGACATCAGATTTCTTACCCAGCCGACCAAGATATT...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp AGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTAAGAATCAATGCATTTTACCTCTaGATGTATCACATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SFTAALCIPVPRMVILRINAFYL*MYHISH
Trigger: ATGACTGATGTGATACATCCAGAGGTAAAATGCATT...GATTCTTAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CCA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACTACCATGTGAGTACTTaGCATATATTAGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYYHVST*HILGLQ
Trigger: TTGAAGGCCTAATATATGCCAAGTACTCACATGGTA...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CCA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACAAATCTGATGTCCCTTaGTTTTTCACTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPQVCNTMCFANLDYISDKSDVP*FFTLWG
Trigger: TCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTT...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS TCA 90 bp CCAGTGACGGGCGGTGGGCCTGGGGCGGCCAGCGGTGACTCCAGATaGGCCGGCCGTCCGCGTTCGCGCCGCGGCGGTGCGGTTGTCGCG +
Preference number: 5 (lower is better)
Translates to: PVTGGGPGAASGDSR*AGRPRSRRGGAVVA
Trigger: CGCGACAACCGCACCGCCGCGGCGCGAACGCGGACGGCCGGCTCATCTGGAGTCACCGCTGGCCGCCCCAGGCCCACCGCCCGTCACTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 90 bp GCGGCGGTGCGGTTGTCGCGGATCAGCAGGATCGGAGTGCGGGGCTaGTGGGCGGAGGCGTTGGCTGCACCAGGGACGGCGGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: AAVRLSRISRIGVRG*WAEALAAPGTAAPG
Trigger: CCCGGGCGCCGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGCAGCCCCGCACTCCGATCCTGCTGATCCGCGACAACCGCACCGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS TCA 90 bp CAGCTTGGAACCAGTGACGGGCGGTGGGCCTGGGGCGGCCAGCGGTaGCTCCAGATGAGCCGGCCGTCCGCGTTCGCGCCGCGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: QLGTSDGRWAWGGQR*LQMSRPSAFAPRRC
Trigger: GCACCGCCGCGGCGCGAACGCGGACGGCCGGCTCATCTGGAGTCACCGCTGGCCGCCCCAGGCCCACCGCCCGTCACTGGTTCCAAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp GCGGTGCGGTTGTCGCGGATCAGCAGGATCGGAGTGCGGGGCTGCTaGGCGGAGGCGTTGGCTGCACCAGGGACGGCGGCGCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: AVRLSRISRIGVRGC*AEALAAPGTAAPGS
Trigger: GGACCCGGGCGCCGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGCAGCCCCGCACTCCGATCCTGCTGATCCGCGACAACCGCACCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS TCA 90 bp CGTCGCCCACCATGCCGTCCACGCGGCTGGGCGGCCGCAGGTTACTaGGCGCAGGAACTTCTCCCGGCGCTGTCTGGTTCTCCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: RRPPCRPRGWAAAGY*AQELLPALSGSPRA
Trigger: CGCGCGCGGAGAACCAGACAGCGCCGGGAGAAGTTCCTGCGCTCAGTAACCTGCGGCCGCCCAGCCGCGTGGACGGCATGGTGGGCGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 90 bp TGTTGGCCGGCGGCGGGAGGGGCGCAGTGCACTAGCGCGCAGAGCTaGAAAGGCCCGAGCAGGAGCACGGTCCAGGCGAAGCGCATCACT +
Preference number: 5 (lower is better)
Translates to: CWPAAGGAQCTSAQS*KGPSRSTVQAKRIT
Trigger: AGTGATGCGCTTCGCCTGGACCGTGCTCCTGCTCGGGCCTTTGCAGCTCTGCGCGCTAGTGCACTGCGCCCCTCCCGCCGCCGGCCAACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp CGGCTGCTCGGACGTGGCACCCTTCCCTTTCCCCTTTCTCAGTCCTaGAAGGCAACGGGGAGCGGCGCGGCAGTCCCGGAGAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: RLLGRGTLPFPLSQS*KATGSGAAVPESGQ
Trigger: CTGCCCGCTCTCCGGGACTGCCGCGCCGCTCCCCGTTGCCTTCCAGGACTGAGAAAGGGGAAAGGGAAGGGTGCCACGTCCGAGCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp GGCGGCCGCAGGTTACTGAGCGCAGGAACTTCTCCCGGCGCTGTCTaGTTCTCCGCGCGCGAGGCGCCAGCTTCGCGGGCTCTAGATGTC +
Preference number: 5 (lower is better)
Translates to: GGRRLLSAGTSPGAV*FSAREAPASRALDV
Trigger: GACATCTAGAGCCCGCGAAGCTGGCGCCTCGCGCGCGGAGAACCAGACAGCGCCGGGAGAAGTTCCTGCGCTCAGTAACCTGCGGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp TCTAGGTCCCTTACTCCTCACCCTTCGCCCACCGGGACTGCAGAGTaGAGCGGAGGACAGCAAGAGAACTGGGGACGCCCGGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: SRSLTPHPSPTGTAE*SGGQQENWGRPGLQ
Trigger: TTGCAGTCCCGGGCGTCCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAAGGGTGAGGAGTAAGGGACCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS CCA 90 bp GAGCGGAGCACGGGTATCTCAGTCTCCACCAAGCAATGCCAAGGGTaGGATTCAGACCCTTCCCCAGTCAAGGCGGCTGCTCGGACGTGG +
Preference number: 5 (lower is better)
Translates to: ERSTGISVSTKQCQG*DSDPSPVKAAARTW
Trigger: CCACGTCCGAGCAGCCGCCTTGACTGGGGAAGGGTCTGAATCCCACCCTTGGCATTGCTTGGTGGAGACTGAGATACCCGTGCTCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp ACATCTGCCCTGTATGCTGTACCTTCGCCCACCGGGACTGCAGAGTaGAGCGGAGGACAGCAAGAGAACTGGGGACGCCCGGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: TSALYAVPSPTGTAE*SGGQQENWGRPGLQ
Trigger: TTGCAGTCCCGGGCGTCCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAAGGTACAGCATACAGGGCAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513319.5
CDS GCA 90 bp GCAATGCCAAGGGTGGGATTCAGACCCTTCCCCAGTCAAGGCGGCTaGTCGGACGTGGCACCCTTCCCTTTCCCCTTTCTCAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AMPRVGFRPFPSQGG*SDVAPFPFPFLSPG
Trigger: TCCAGGACTGAGAAAGGGGAAAGGGAAGGGTGCCACGTCCGAGCAGCCGCCTTGACTGGGGAAGGGTCTGAATCCCACCCTTGGCATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 90 bp CAAGGAGGCGAGCGGAGCACGGGTATCTCAGTCTCCACCAAGCAATaGCAAGGGTGGGATTCAGACCCTTCCCCAGTCAAGGCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QGGERSTGISVSTKQ*QGWDSDPSPVKAAA
Trigger: AGCAGCCGCCTTGACTGGGGAAGGGTCTGAATCCCACCCTTGGCATTGCTTGGTGGAGACTGAGATACCCGTGCTCCGCTCGCCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp TCGCCCACCGGGACTGCAGAGTGGAGCGGAGGACAGCAAGAGAACTaGGGACGCCCGGGACTGCAAAGCAATGTGAAAAGGAAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SPTGTAEWSGGQQEN*GRPGLQSNVKRKQE
Trigger: CTCCTGCTTCCTTTTCACATTGCTTTGCAGTCCCGGGCGTCCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS TCA 90 bp GAGGACAGCAAGAGAACTGGGGACGCCCGGGACTGCAAAGCAATGTaGAAAGGAAGCAGGAGGGGCCAGACGCGCGGTTTGCACTGGATT +
Preference number: 5 (lower is better)
Translates to: EDSKRTGDARDCKAM*KGSRRGQTRGLHWI
Trigger: AATCCAGTGCAAACCGCGCGTCTGGCCCCTCCTGCTTCCTTTTCACATTGCTTTGCAGTCCCGGGCGTCCCCAGTTCTCTTGCTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS CCA 90 bp AGGCAACGGGGAGCGGCGCGGCAGTCCCGGAGAGCGGGCAGTGTCTaGAGTGAAGGAAGGAGGAGAGATTTTAAACTTTCTGGCACGTTT +
Preference number: 5 (lower is better)
Translates to: RQRGAARQSRRAGSV*SEGRRRDFKLSGTF
Trigger: AAACGTGCCAGAAAGTTTAAAATCTCTCCTCCTTCCTTCACTCCAGACACTGCCCGCTCTCCGGGACTGCCGCGCCGCTCCCCGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp AAACTTGCTTTGTGGCCTTCAGCCACTCTCCTCTGGGTGTTGGCATCAAGCAGGTGTCGAGTAGCCAGCTaGGAACCAGTGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: KLALWPSATLLWVLASSRCRVAS*EPVTGG
Trigger: ACCGCCCGTCACTGGTTCCAAGCTGGCTACTCGACA...CCTGCTTGATGCCAACACCCAGAGGAGAGTGGCTGAAGGCCACAAAGCAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS GCA 90 bp GGAGACCGTACTGGAAGTAGCCAGTGCCGTATCCGGGCCGGTACCTaGCCCCAGGTCTGGGCCTTTCATAAGTATCGTAGTAGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: GDRTGSSQCRIRAGT*PQVWAFHKYRSSCN
Trigger: ATTACAACTACTACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGATACGGCACTGGCTACTTCCAGTACGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CAA 90 bp TTGTGCAGCCTGAGGCATACGCATGATGTCCTGTGTAGCGAATGTCACAGCGCAACTCCTTTTGCCAGATaGACCCCGCTCGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LCSLRHTHDVLCSECHSATPFAR*TPLEED
Trigger: GTCCTCCTCGAGCGGGGTCAATCTGGCAAAAGGAGT...TGCGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCTGCTGGGCGGAGGCGTaGGCTGCACCAGGGACGGCG +
Preference number: 5 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGCWAEA*AAPGTA
Trigger: CGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGCA...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCGCCGCGGCGGTGCGGTaGTCGCGGATCAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPAAAVR*SRISRI
Trigger: GATCCTGCTGATCCGCGACAACCGCACCGCCGCGGC...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 90 bp GCTGTACGTACTGGAAGTAGCCAGTGCCGTATCCGGGCCGGTACCTaGCCCCAGGTCTGGGCCTTTCATAAGTATCGTAGTAGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: AVRTGSSQCRIRAGT*PQVWAFHKYRSSCN
Trigger: ATTACAACTACTACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGATACGGCACTGGCTACTTCCAGTACGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS CCA 90 bp GGAAGTAGCCAGTGCCGTATCCGGGCCGGTACCTGCCCCCAGGTCTaGGCCTTTCATAAGTATCGTAGTAGTTGTAATAAGGGTTGTCGT +
Preference number: 5 (lower is better)
Translates to: GSSQCRIRAGTCPQV*AFHKYRSSCNKGCR
Trigger: ACGACAACCCTTATTACAACTACTACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGATACGGCACTGGCTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CAA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAATGCTGGGCGGAGGCGTaGGCTGCACCAGGGACGGCG +
Preference number: 5 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKCWAEA*AAPGTA
Trigger: CGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGCA...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTGGCCAGACGCGCGGTTaGCACTGGATTCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPGQTRG*HWIPGL
Trigger: CAGCCCTGGAATCCAGTGCAAACCGCGCGTCTGGCC...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS-3UTR CAA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCTGTCGAGTAGCCAGCTaGGAACCAGTGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSCRVAS*EPVTGG
Trigger: ACCGCCCGTCACTGGTTCCAAGCTGGCTACTCGACA...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp GATTTTAAACTTTCTGGCACGTTTGCAAAGTTACACAAGCCGTTCTaGCCCGGCCGCCCCTCAGCTATTTGTTCACGTAATGCGATTGGA +
Preference number: 5 (lower is better)
Translates to: DFKLSGTFAKLHKPF*PGRPSAICSRNAIG
Trigger: TCCAATCGCATTACGTGAACAAATAGCTGAGGGGCGGCCGGGCCAGAACGGCTTGTGTAACTTTGCAAACGTGCCAGAAAGTTTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGCCGCGCATCTCAGGTaGTACATGGACATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSAAHLR*YMDIFC
Trigger: GCAGAAGATGTCCATGTACAACCTGAGATGCGCGGC...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS-3UTR CAA 90 bp TTGTGCAGCCTGAGGCATACGCATGATGTCCTGTGTAGCGAATGTCACAGCGCACCAATGGTAATGTGTTaGTTTCTTTCTCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: LCSLRHTHDVLCSECHSAPMVMC*FLSQHQ
Trigger: CTGGTGCTGAGAAAGAAACAAACACATTACCATTGG...TGCGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp CATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTGTTCACGTAATGCGATaGGAAACGTGCAAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: HSQEYLGRLGKKSDVPWFVHVMR*ETCKAD
Trigger: GTCCGCCTTGCACGTTTCCAATCGCATTACGTGAAC...AAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGTCTAATACGGTGAAATaGTGCAGCCTGAGGCATACG +
Preference number: 5 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWSNTVK*CSLRHT
Trigger: CGTATGCCTCAGGCTGCACAATTTCACCGTATTAGA...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTTCTAATACGGTGAAATaGTGCAGCCTGAGGCATACG +
Preference number: 5 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPSNTVK*CSLRHT
Trigger: CGTATGCCTCAGGCTGCACAATTTCACCGTATTAGA...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACGCCGCGCATCTCAGGTaGTACATGGACATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYAAHLR*YMDIFC
Trigger: GCAGAAGATGTCCATGTACAACCTGAGATGCGCGGC...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CAA 90 bp AATGTTGATGACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTGGGTAAGATTGGTTTTTCACTCTTaGGGGAAATCTGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: NVDDNCAIPRNILVGWVRLVFHS*GKSEQH
Trigger: GTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCAA...TCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTCATCAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CAA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTCTAATACGGTGAAATaGTGCAGCCTGAGGCATACG +
Preference number: 5 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPSNTVK*CSLRHT
Trigger: CGTATGCCTCAGGCTGCACAATTTCACCGTATTAGA...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 90 bp AATGTTGATGACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCCCTTGGTTTTTCACTCTTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: NVDDNCAIPRNILVG*VRNLMSLGFSLFGE
Trigger: TTCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTCATCAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000505593.5
ENST00000508067.1
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAACTCCTTTTGCCAGATaGACCCCGCTCGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PTPQVCNTMCFANLDYISTPFAR*TPLEED
Trigger: GTCCTCCTCGAGCGGGGTCAATCTGGCAAAAGGAGT...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp GTATTTATTACTCAGCCTTATAGCACCTCCAGCTGTGTGTGTGCAGTACATGCAATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: VFITQPYSTSSCVCAVHAIPRNI*VGWVRN
Trigger: ATTTCTTACCCAGCCGACCAAGATATTCCTGGGAAT...TGCATGTACTGCACACACACAGCTGGAGGTGCTATAAGGCTGAGTAATAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508067.1
CDS-3UTR CAA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSIPRNI*VGWVRN
Trigger: ATTTCTTACCCAGCCGACCAAGATATTCCTGGGAAT...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTCATACTGTGGTAATGTaGATGACAACTGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPHTVVM*MTTVPF
Trigger: GAATGGCACAGTTGTCATCAACATTACCACAGTATG...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTCATACTGTGGTAATGTaGATGACAACTGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: HSQEYLGRLGKKSDVPWFHTVVM*MTTVPF
Trigger: GAATGGCACAGTTGTCATCAACATTACCACAGTATG...AAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CAA 90 bp AGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTGGTGGATTGGGAGTTTTGCTTaGCCTTCTAATACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SSTKALSVLSTGKLVPWWIGSFA*PSNTVK
Trigger: TTTCACCGTATTAGAAGGCAAAGCAAAACTCCCAAT...CCACCAGGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTCCAATGGTAATGTGTTaGTTTCTTTCTCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPPMVMC*FLSQHQ
Trigger: CTGGTGCTGAGAAAGAAACAAACACATTACCATTGG...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCAACTTTCTGGCACGTTaGCAAAGTTACACAAGCCGT +
Preference number: 5 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGNFLAR*QSYTSR
Trigger: ACGGCTTGTGTAACTTTGCAAACGTGCCAGAAAGTT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTATTGGTTTTTCACTCTTaGGGGAAATCTGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LSSFTAALCIPVPRMVILLVFHS*GKSEQH
Trigger: GTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCAA...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAATTGGTTTTTCACTCTTaGGGGAAATCTGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKLVFHS*GKSEQH
Trigger: GTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCAA...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGIPRNI*VGWVRN
Trigger: ATTTCTTACCCAGCCGACCAAGATATTCCTGGGAAT...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKIPRNI*VGWVRN
Trigger: ATTTCTTACCCAGCCGACCAAGATATTCCTGGGAAT...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGTAAGCTTGTGCCCTATCCATTGGGAGTTTaGCTTTGCCTTCTAATACGG +
Preference number: 5 (lower is better)
Translates to: SYSSTKALSVLSTGKLVPYPLGV*LCLLIR
Trigger: CCGTATTAGAAGGCAAAGCAAAACTCCCAATGGATA...GGGCACAAGCTTACCAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCAGCGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: NPTYNISAHGKDKMIEGSALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...GCTGCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCTACGCAGCACAGTCCTaGGTTTTGCAGAAAGTATAT +
Preference number: 5 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGYAAQS*VLQKVY
Trigger: ATATACTTTCTGCAAAACCAAGGACTGTGCTGCGTA...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TCCCACTTCAGAACACCAGGCACTGATTTATCCATTGGGAGTTTTGCTTTGCCTATACCATGTGAGTACTaGGCATATATTAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SHFRTPGTDLSIGSFALPIPCEY*AYIRPS
Trigger: TGAAGGCCTAATATATGCCAAGTACTCACATGGTAT...AGGCAAAGCAAAACTCCCAATGGATAAATCAGTGCCTGGTGTTCTGAAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AATGTTGATGACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTGGGTAAGAATACCATGTGAGTACTaGGCATATATTAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: NVDDNCAIPRNILVGWVRIPCEY*AYIRPS
Trigger: TGAAGGCCTAATATATGCCAAGTACTCACATGGTAT...TCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTCATCAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS-3UTR CAA 90 bp GGCAAAGAGGTACATCAAAGAAGCTATTCCATAGCTCAGTTACAGCTCAACAAAAGTGGCCCAGGAATTTaGGTAGCTAGGAATGAGACT +
Preference number: 5 (lower is better)
Translates to: GKEVHQRSYSIAQLQLNKSGPGI*VARNET
Trigger: AGTCTCATTCCTAGCTACCAAAATTCCTGGGCCACT...TTTGTTGAGCTGTAACTGAGCTATGGAATAGCTTCTTTGATGTACCTCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CAA 90 bp GTCATAGTGGCTAAACTCATCCATACTGTGGTAATGTTGATGACAACTGTGCCACATACTGTGGTAATGTaGATGACAACTGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: VIVAKLIHTVVMLMTTVPHTVVM*MTTVPF
Trigger: GAATGGCACAGTTGTCATCAACATTACCACAGTATG...TGGCACAGTTGTCATCAACATTACCACAGTATGGATGAGTTTAGCCACTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS-3UTR CAA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCATTGGGAGTTTTGCTTaGCCTTCTAATACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGIGSFA*PSNTVK
Trigger: TTTCACCGTATTAGAAGGCAAAGCAAAACTCCCAAT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CTTTCCAGTTTCACGGCTGCCTTATGTATACCAGTCCCAAGAATGGTGATATTATATCCATTGGGAGTTTaGCTTTGCCTTCTAATACGG +
Preference number: 5 (lower is better)
Translates to: LSSFTAALCIPVPRMVILYPLGV*LCLLIR
Trigger: CCGTATTAGAAGGCAAAGCAAAACTCCCAATGGATA...TAATATCACCATTCTTGGGACTGGTATACATAAGGCAGCCGTGAAACTGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCCAAGAATGGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: PKNGDIKNPTYNISAHGKALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...TTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACCATTCTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGTACTTGTGAGTTATTaGGGTGTGTTTAGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLVLVSY*GVFRGA
Trigger: GGCACCTCTAAACACACCCAAATAACTCACAAGTAC...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231004.5
CDS-3UTR CAA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGTTGGTTTTTCACTCTTaGGGGAAATCTGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMLVFHS*GKSEQH
Trigger: GTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCAA...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp AAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGATAGAGGGCATTGGGAGTTTTGCTTaGCCTTCTAATACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: KNPTYNISAHGKDKMIEGIGSFA*PSNTVK
Trigger: TTTCACCGTATTAGAAGGCAAAGCAAAACTCCCAAT...GCCCTCTATCATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGCACTGATTTATCCATaGGGAGTTTTGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLALIYP*GVLLCL
Trigger: AAGGCAAAGCAAAACTCCCAATGGATAAATCAGTGC...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TCAGACAGGATTGGGCAGCTCCCTTACTTAATTTGTTCCAAAACAAAAGTTGACCCAATGGTAATGTGTTaGTTTCTTTCTCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: SDRIGQLPYLICSKTKVDPMVMC*FLSQHQ
Trigger: CTGGTGCTGAGAAAGAAACAAACACATTACCATTGG...GTCAACTTTTGTTTTGGAACAAATTAAGTAAGGGAGCTGCCCAATCCTGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp GGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGGGCAAGTATATTTTTCCTTaGTTCACCAACCCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GKDKMIEGSLKKYQTGLGKYIFP*FTNPSS
Trigger: ACTTGAGGGGTTGGTGAACAAAGGAAAAATATACTT...GCCCAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CATGGGAAAGATAAAATGATAGAGGGCAGCCTCAAGAAATATCAGACAGGATTGTACGCAGCACAGTCCTaGGTTTTGCAGAAAGTATAT +
Preference number: 5 (lower is better)
Translates to: HGKDKMIEGSLKKYQTGLYAAQS*VLQKVY
Trigger: ATATACTTTCTGCAAAACCAAGGACTGTGCTGCGTA...CAATCCTGTCTGATATTTCTTGAGGCTGCCCTCTATCATTTTATCTTTCCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp GGTGATATTAAGAATCCCACTTACAACATCTCTGCCCATGGGAAAGATAAAATGCATACTGTGGTAATGTaGATGACAACTGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: GDIKNPTYNISAHGKDKMHTVVM*MTTVPF
Trigger: GAATGGCACAGTTGTCATCAACATTACCACAGTATG...CATTTTATCTTTCCCATGGGCAGAGATGTTGTAAGTGGGATTCTTAATATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CTATTCCATAGCTCAGTTACAGCTCAACAAAAGCTCTGTCTGTATTGTCTACTGGCACAGTCCTTGGTTTaGCAGAAAGTATATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LFHSSVTAQQKLCLYCLLAQSLV*QKVYFS
Trigger: GGAAAAATATACTTTCTGCAAAACCAAGGACTGTGC...CAGTAGACAATACAGACAGAGCTTTTGTTGAGCTGTAACTGAGCTATGGAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PTPQVCNTMCFANLDYISIPRNI*VGWVRN
Trigger: ATTTCTTACCCAGCCGACCAAGATATTCCTGGGAAT...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp TATCACATCAGTCATCAAAATGACTTTCCAGTTTCACGGCTGCCTTATGTATACATTGGGAGTTTTGCTTaGCCTTCTAATACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: YHISHQNDFPVSRLPYVYIGSFA*PSNTVK
Trigger: TTTCACCGTATTAGAAGGCAAAGCAAAACTCCCAAT...GTATACATAAGGCAGCCGTGAAACTGGAAAGTCATTTTGATGACTGATGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000513319.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCATATCCATTGGGAGTTTaGCTTTGCCTTCTAATACGG +
Preference number: 5 (lower is better)
Translates to: PTPQVCNTMCFANLDYISYPLGV*LCLLIR
Trigger: CCGTATTAGAAGGCAAAGCAAAACTCCCAATGGATA...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp CCAACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGCACAGTCCTTGGTTTaGCAGAAAGTATATTTTTCC +
Preference number: 5 (lower is better)
Translates to: PTPQVCNTMCFANLDYISAQSLV*QKVYFS
Trigger: GGAAAAATATACTTTCTGCAAAACCAAGGACTGTGC...TGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS-3UTR CAA 90 bp ACCCCTCAAGTATGTAATACTATGTGCTTTGCTAATTTAGACTATATCTCAGACAAGTATATTTTTCCTTaGTTCACCAACCCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: TPQVCNTMCFANLDYISDKYIFP*FTNPSS
Trigger: ACTTGAGGGGTTGGTGAACAAAGGAAAAATATACTT...GTCTGAGATATAGTCTAAATTAGCAAAGCACATAGTATTACATACTTGAGGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS TCA 72 bp ACCAGTGACGGGCGGTGGGCCTGGGGCGGCCAGCGGTaGCTCCAGATGAGCCGGCCGTCCGCGTTCGCGCCG +
Preference number: 6 (lower is better)
Translates to: TSDGRWAWGGQR*LQMSRPSAFAP
Trigger: CGGCGCGAACGCGGACGGCCGGCTCATCTGGAGTCACCGCTGGCCGCCCCAGGCCCACCGCCCGTCACTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CAA 72 bp GAGCCGGCCGTCCGCGTTCGCGCCGCGGCGGTGCGGTaGTCGCGGATCAGCAGGATCGGAGTGCGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: EPAVRVRAAAVR*SRISRIGVRGC
Trigger: GCAGCCCCGCACTCCGATCCTGCTGATCCGCGACAACCGCACCGCCGCGGCGCGAACGCGGACGGCCGGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp CAGATGAGCCGGCCGTCCGCGTTCGCGCCGCGGCGGTaGGGTTGTCGCGGATCAGCAGGATCGGAGTGCGGG +
Preference number: 6 (lower is better)
Translates to: QMSRPSAFAPRR*GCRGSAGSECG
Trigger: CCCGCACTCCGATCCTGCTGATCCGCGACAACCGCACCGCCGCGGCGCGAACGCGGACGGCCGGCTCATCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CAA 90 bp ACTCCAGATGAGCCGGCCGTCCGCGTTCGCGCCGCGGCGGTGCGGTaGTCGCGGATCAGCAGGATCGGAGTGCGGGGCTGCTGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: TPDEPAVRVRAAAVR*SRISRIGVRGCWAE
Trigger: CTCCGCCCAGCAGCCCCGCACTCCGATCCTGCTGATCCGCGACAACCGCACCGCCGCGGCGCGAACGCGGACGGCCGGCTCATCTGGAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp GCGGCGGGAGGGGCGCAGTGCACTAGCGCGCAGAGCTaGAAAGGCCCGAGCAGGAGCACGGTCCAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: AAGGAQCTSAQS*KGPSRSTVQAK
Trigger: CTTCGCCTGGACCGTGCTCCTGCTCGGGCCTTTGCAGCTCTGCGCGCTAGTGCACTGCGCCCCTCCCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp CGGTTGTCGCGGATCAGCAGGATCGGAGTGCGGGGCTaGTGGGCGGAGGCGTTGGCTGCACCAGGGACGGCG +
Preference number: 6 (lower is better)
Translates to: RLSRISRIGVRG*WAEALAAPGTA
Trigger: CGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGCAGCCCCGCACTCCGATCCTGCTGATCCGCGACAACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 72 bp TTGTCGCGGATCAGCAGGATCGGAGTGCGGGGCTGCTaGGCGGAGGCGTTGGCTGCACCAGGGACGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LSRISRIGVRGC*AEALAAPGTAA
Trigger: CGCCGCCGTCCCTGGTGCAGCCAACGCCTCCGCCCAGCAGCCCCGCACTCCGATCCTGCTGATCCGCGACAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CAA 90 bp GCGCGAGGCGCCAGCTTCGCGGGCTCTAGATGTCGAGTAGCCAGCTaGGAACCAGTGACGGGCGGTGGGCCTGGGGCGGCCAGCGGTGAC +
Preference number: 6 (lower is better)
Translates to: ARGASFAGSRCRVAS*EPVTGGGPGAASGD
Trigger: GTCACCGCTGGCCGCCCCAGGCCCACCGCCCGTCACTGGTTCCAAGCTGGCTACTCGACATCTAGAGCCCGCGAAGCTGGCGCCTCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CAA 72 bp GCCAGCTTCGCGGGCTCTAGATGTCGAGTAGCCAGCTaGGAACCAGTGACGGGCGGTGGGCCTGGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: ASFAGSRCRVAS*EPVTGGGPGAA
Trigger: GGCCGCCCCAGGCCCACCGCCCGTCACTGGTTCCAAGCTGGCTACTCGACATCTAGAGCCCGCGAAGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS TCA 72 bp CCATGCCGTCCACGCGGCTGGGCGGCCGCAGGTTACTaGGCGCAGGAACTTCTCCCGGCGCTGTCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: PCRPRGWAAAGY*AQELLPALSGS
Trigger: AGAACCAGACAGCGCCGGGAGAAGTTCCTGCGCTCAGTAACCTGCGGCCGCCCAGCCGCGTGGACGGCATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 72 bp AGGTTACTGAGCGCAGGAACTTCTCCCGGCGCTGTCTaGTTCTCCGCGCGCGAGGCGCCAGCTTCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: RLLSAGTSPGAV*FSAREAPASRA
Trigger: AGCCCGCGAAGCTGGCGCCTCGCGCGCGGAGAACCAGACAGCGCCGGGAGAAGTTCCTGCGCTCAGTAACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CCA 72 bp CTTACTCCTCACCCTTCGCCCACCGGGACTGCAGAGTaGAGCGGAGGACAGCAAGAGAACTGGGGACGCCCG +
Preference number: 6 (lower is better)
Translates to: LTPHPSPTGTAE*SGGQQENWGRP
Trigger: CGGGCGTCCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAAGGGTGAGGAGTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS CCA 72 bp CTGTATGCTGTACCTTCGCCCACCGGGACTGCAGAGTaGAGCGGAGGACAGCAAGAGAACTGGGGACGCCCG +
Preference number: 6 (lower is better)
Translates to: LYAVPSPTGTAE*SGGQQENWGRP
Trigger: CGGGCGTCCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAAGGTACAGCATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513319.5
CDS CAA 90 bp CGTTCTGGCCCGGCCGCCCCTCAGCTATTTGTTCACGTAATGCGATaGGAAACGTGCAAGGCGGACAGCTCCTCGCCTCTGCCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RSGPAAPQLFVHVMR*ETCKADSSSPLPLP
Trigger: AGGGAGGGGCAGAGGCGAGGAGCTGTCCGCCTTGCACGTTTCCAATCGCATTACGTGAACAAATAGCTGAGGGGCGGCCGGGCCAGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS GCA 72 bp AGGGTGGGATTCAGACCCTTCCCCAGTCAAGGCGGCTaGTCGGACGTGGCACCCTTCCCTTTCCCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: RVGFRPFPSQGG*SDVAPFPFPFL
Trigger: GAGAAAGGGGAAAGGGAAGGGTGCCACGTCCGAGCAGCCGCCTTGACTGGGGAAGGGTCTGAATCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp CAGGAGCACGGTCCAGGCGAAGCGCATCACTCCTTTTaGCAGATTGACCCCGCTCGAGGAGGACGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: QEHGPGEAHHSF*QIDPARGGRGS
Trigger: TGAGCCACGTCCTCCTCGAGCGGGGTCAATCTGGCAAAAGGAGTGATGCGCTTCGCCTGGACCGTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp TCTGCCCTGTATGCTGTACGTACTGGAAGTAGCCAGTaGCGTATCCGGGCCGGTACCTGCCCCCAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SALYAVRTGSSQ*RIRAGTCPQVW
Trigger: CCAGACCTGGGGGCAGGTACCGGCCCGGATACGGCACTGGCTACTTCCAGTACGTACAGCATACAGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508067.1
ENST00000639739.2
CDS GCA 72 bp ATCTGCCCTGTATGCTGTACCTTCGCCCACCGGGACTaGAGAGTGGAGCGGAGGACAGCAAGAGAACTGGGG +
Preference number: 6 (lower is better)
Translates to: ICPVCCTFAHRD*RVERRTARELG
Trigger: CCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCCGGTGGGCGAAGGTACAGCATACAGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513319.5
CDS CCA 72 bp GGGACTGCAGAGTGGAGCGGAGGACAGCAAGAGAACTaGGGACGCCCGGGACTGCAAAGCAATGTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: GTAEWSGGQQEN*GRPGLQSNVKR
Trigger: CCTTTTCACATTGCTTTGCAGTCCCGGGCGTCCCCAGTTCTCTTGCTGTCCTCCGCTCCACTCTGCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503759.5
CDS CAA 72 bp CCGGCCGCCCCTCAGCTATTTGTTCACGTAATGCGATaGGAAACGTGCAAGGCGGACAGCTCCTCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: PAAPQLFVHVMR*ETCKADSSSPL
Trigger: CAGAGGCGAGGAGCTGTCCGCCTTGCACGTTTCCAATCGCATTACGTGAACAAATAGCTGAGGGGCGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS GCA 72 bp GAGCGGAGCACGGGTATCTCAGTCTCCACCAAGCAATaGCAAGGGTGGGATTCAGACCCTTCCCCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: ERSTGISVSTKQ*QGWDSDPSPVK
Trigger: CTTGACTGGGGAAGGGTCTGAATCCCACCCTTGGCATTGCTTGGTGGAGACTGAGATACCCGTGCTCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp ACTGGAAGTAGCCAGTGCCGTATCCGGGCCGGTACCTaGCCCCAGGTCTGGGCCTTTCATAAGTATCGTAGT +
Preference number: 6 (lower is better)
Translates to: TGSSQCRIRAGT*PQVWAFHKYRS
Trigger: ACTACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGATACGGCACTGGCTACTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000508067.1
ENST00000639739.2
CDS CCA 72 bp ACGGGTATCTCAGTCTCCACCAAGCAATGCCAAGGGTaGGATTCAGACCCTTCCCCAGTCAAGGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: TGISVSTKQCQG*DSDPSPVKAAA
Trigger: AGCAGCCGCCTTGACTGGGGAAGGGTCTGAATCCCACCCTTGGCATTGCTTGGTGGAGACTGAGATACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS CAA 72 bp ACGGTCCAGGCGAAGCGCATCACTCCTTTTGCCAGATaGACCCCGCTCGAGGAGGACGTGGCTCACAGAAAA +
Preference number: 6 (lower is better)
Translates to: TVQAKRITPFAR*TPLEEDVAHRK
Trigger: TTTTCTGTGAGCCACGTCCTCCTCGAGCGGGGTCAATCTGGCAAAAGGAGTGATGCGCTTCGCCTGGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000639739.2
CDS GCA 72 bp CCTCAGCTATTTGTTCACGTAATGCGATTGGAAACGTaGAAGGCGGACAGCTCCTCGCCTCTGCCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: PQLFVHVMRLET*KADSSSPLPLP
Trigger: AGGGAGGGGCAGAGGCGAGGAGCTGTCCGCCTTGCACGTTTCCAATCGCATTACGTGAACAAATAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS GCA 72 bp TCTGAGCAGCACCCTGTGATCATAATCTCTGACATCTaGCCTGTATGCTGTACCTTCGCCCACCGGGACTGC +
Preference number: 6 (lower is better)
Translates to: SEQHPVIIISDI*PVCCTFAHRDC
Trigger: GCAGTCCCGGTGGGCGAAGGTACAGCATACAGGGCAGATGTCAGAGATTATGATCACAGGGTGCTGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513319.5
CDS CCA 72 bp ATCTCAGGTTGTACATGGACATCTTCTGCACGTACGTaGACGCCTGGATGTAGTAGGGGTCGGCCACCAGGT +
Preference number: 6 (lower is better)
Translates to: ISGCTWTSSART*TPGCSRGRPPG
Trigger: ACCTGGTGGCCGACCCCTACTACATCCAGGCGTCCACGTACGTGCAGAAGATGTCCATGTACAACCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS CCA 72 bp GACAGTTTTCCTCCGCCGCGCATCTCAGGTTGTACATaGACATCTTCTGCACGTACGTGGACGCCTGGATGT +
Preference number: 6 (lower is better)
Translates to: DSFPPPRISGCT*TSSARTWTPGC
Trigger: ACATCCAGGCGTCCACGTACGTGCAGAAGATGTCCATGTACAACCTGAGATGCGCGGCGGAGGAAAACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS CCA 72 bp CAGTGCCGTATCCGGGCCGGTACCTGCCCCCAGGTCTaGGCCTTTCATAAGTATCGTAGTAGTTGTAATAAG +
Preference number: 6 (lower is better)
Translates to: QCRIRAGTCPQV*AFHKYRSSCNK
Trigger: CTTATTACAACTACTACGATACTTATGAAAGGCCCAGACCTGGGGGCAGGTACCGGCCCGGATACGGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231004.5
ENST00000508067.1
ENST00000639739.2
CDS CCA 72 bp CTTTCTGGCACGTTTGCAAAGTTACACAAGCCGTTCTaGCCCGGCCGCCCCTCAGCTATTTGTTCACGTAAT +
Preference number: 6 (lower is better)
Translates to: LSGTFAKLHKPF*PGRPSAICSRN
Trigger: ATTACGTGAACAAATAGCTGAGGGGCGGCCGGGCCAGAACGGCTTGTGTAACTTTGCAAACGTGCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS CAA 90 bp TCTGGAGTGAAGGAAGGAGGAGAGATTTTAAACTTTCTGGCACGTTaGCAAAGTTACACAAGCCGTTCTGGCCCGGCCGCCCCTCAGCTA +
Preference number: 6 (lower is better)
Translates to: SGVKEGGEILNFLAR*QSYTSRSGPAAPQL
Trigger: TAGCTGAGGGGCGGCCGGGCCAGAACGGCTTGTGTAACTTTGCAAACGTGCCAGAAAGTTTAAAATCTCTCCTCCTTCCTTCACTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS CAA 72 bp AAGGAAGGAGGAGAGATTTTAAACTTTCTGGCACGTTaGCAAAGTTACACAAGCCGTTCTGGCCCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: KEGGEILNFLAR*QSYTSRSGPAA
Trigger: GGCGGCCGGGCCAGAACGGCTTGTGTAACTTTGCAAACGTGCCAGAAAGTTTAAAATCTCTCCTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639739.2
CDS GCA 72 bp TCTGAGCAGCACCCTGTGATCATAATCTCTGACATCTaGCCTGTATGCTGTACTGGCCAGACAGTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: SEQHPVIIISDI*PVCCTGQTVFL
Trigger: GAGGAAAACTGTCTGGCCAGTACAGCATACAGGGCAGATGTCAGAGATTATGATCACAGGGTGCTGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231004.5
ENST00000503759.5
CDS CCA 72 bp TATCTTGGTCGGCTGGGTAAGAAATCTGATGTCCCTTaGTTTTTCACTCTTTGGGGAAATCTGAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: YLGRLGKKSDVP*FFTLWGNLSST
Trigger: GGTGCTGCTCAGATTTCCCCAAAGAGTGAAAAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000505593.5
ENST00000508067.1
ENST00000513319.5
ENST00000639739.2
CDS CCA 72 bp GACAACTGTGCCATTCCCAGGAATATCTTGGTCGGCTaGGTAAGAAATCTGATGTCCCTTGGTTTTTCACTC +
Preference number: 6 (lower is better)
Translates to: DNCAIPRNILVG*VRNLMSLGFSL
Trigger: GAGTGAAAAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000505593.5
ENST00000508067.1
ENST00000513319.5
ENST00000639739.2
CDS CAA 90 bp TACTGTGGTAATGTTGATGACAACTGTGCCATTCCCAGGAATATCTaGGTCGGCTGGGTAAGAAATCTGATGTCCCTTGGTTTTTCACTC +
Preference number: 6 (lower is better)
Translates to: YCGNVDDNCAIPRNI*VGWVRNLMSLGFSL
Trigger: GAGTGAAAAACCAAGGGACATCAGATTTCTTACCCAGCCGACCAAGATATTCCTGGGAATGGCACAGTTGTCATCAACATTACCACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231004.5
ENST00000503759.5
ENST00000505593.5
ENST00000508067.1
ENST00000513319.5
ENST00000639739.2
CDS GCA 72 bp TCTGAGCAGCACCCTGTGATCATAATCTCTGACATCTaGCCTGTATGCTGTACCAGATTTAAATTAATAATT +
Preference number: 6 (lower is better)
Translates to: SEQHPVIIISDI*PVCCTRFKLII
Trigger: AATTATTAATTTAAATCTGGTACAGCATACAGGGCAGATGTCAGAGATTATGATCACAGGGTGCTGCTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505593.5