RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LONRF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000175556

Ensembl transcript IDs: ENST00000304778.11, ENST00000371628.8, ENST00000422289.3, ENST00000439603.5, ENST00000472173.5, ENST00000481285.5

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCGGCTGTGTTGTAGCCATCCCGCTGGCTCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGCTGTCAACCACTGAGCGGCCATCAG +
Preference number: 1 (lower is better)
Translates to: CRLCCSHPAGSDGAP*SASCLCCQPLSGHQ
Trigger: CTGATGGCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGGCTACAACACAGCCGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR CCA 90 bp TGTTTCCCTGGGCTGGCACCCAGCCATTTCTGTAGCCCCATGCTGTaGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCTGGGTTACAGC +
Preference number: 1 (lower is better)
Translates to: CFPGLAPSHFCSPML*LKGLLPIFLSLGYS
Trigger: GCTGTAACCCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTGCCAGCCCAGGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR GCA 90 bp AGTTCTGTTTCCCTGGGCTGGCACCCAGCCATTTCTGTAGCCCCATaGTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCTGGGTT +
Preference number: 1 (lower is better)
Translates to: SSVSLGWHPAISVAP*CGSRDFCLFSCPWV
Trigger: AACCCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTGCCAGCCCAGGGAAACAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR CCA 90 bp TGGAGTCGAGAGACTAGATCCTTGATGAGTTCTGTTTCCCTGGGCTaGCACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGAC +
Preference number: 1 (lower is better)
Translates to: WSRETRSLMSSVSLG*HPAISVAPCCGSRD
Trigger: GTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTGCCAGCCCAGGGAAACAGAACTCATCAAGGATCTAGTCTCTCGACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 90 bp CCATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCAC +
Preference number: 1 (lower is better)
Translates to: PFSLSFKDLIARKGS*ARLSKGRTANIHQH
Trigger: GTGCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 90 bp GAGCTCCTCTTCGGCAATCCACTCACTAGTTTTGGTTTCGGGATATaGAGGCCAGGACTCGTCGAATACCATTCAGTCTGTCCTTTAAGG +
Preference number: 1 (lower is better)
Translates to: ELLFGNPLTSFGFGI*RPGLVEYHSVCPLR
Trigger: CCTTAAAGGACAGACTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGCCGAAGAGGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 90 bp CTCTTGCCTATGCTGTCAACCACTGAGCGGCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGGATGCAGCCATATTCTGCAAACCTG +
Preference number: 1 (lower is better)
Translates to: LLPMLSTTERPSAKN*TFLISRMQPYSANL
Trigger: CAGGTTTGCAGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATAGGCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 90 bp TGCTGTCAACCACTGAGCGGCCATCAGCAAAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCATATTCTGCAAACCTGTTTATTGAGA +
Preference number: 1 (lower is better)
Translates to: CCQPLSGHQQRIEHF*SLGCSHILQTCLLR
Trigger: TCTCAATAAACAGGTTTGCAGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 90 bp GAAACCACAATGATGCTTGCTGATAGACACAGTTATGTAATCCCATaGGCTCAGCACAATCCTCTCCCTGAACCTTTTGGTCTTCAATGT +
Preference number: 1 (lower is better)
Translates to: ETTMMLADRHSYVIP*AQHNPLPEPFGLQC
Trigger: ACATTGAAGACCAAAAGGTTCAGGGAGAGGATTGTGCTGAGCTCATGGGATTACATAACTGTGTCTATCAGCAAGCATCATTGTGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR TCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCTATGCTGTCAACCACTaGGCGGCCATCAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: GRGAELGFPREELLTSTSYAVNH*AAISKE
Trigger: TTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATA...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR GCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACAAGCGCCTCTTGCCTATaGTGTCAACCACTGAGCGGC +
Preference number: 2 (lower is better)
Translates to: SLLGRGAELGFPREELLTSASCL*CQPLSG
Trigger: GCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCT...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCGGCAGTGGGGAAGGTaGGAGCTCCTCTTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFRQWGR*ELLFGN
Trigger: ATTGCCGAAGAGGAGCTCCCACCTTCCCCACTGCCG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCACCAGCACCAGGCTaGGCCATTCGGGTTCATCTG +
Preference number: 2 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPPAPG*AIRVHL
Trigger: CAGATGAACCCGAATGGCCCAGCCTGGTGCTGGTGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR CAA 90 bp AGTGGGGAAGGTGGGAGCTCCTCTTCGGCAATCCACTCACTAGTTTaGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAG +
Preference number: 2 (lower is better)
Translates to: SGEGGSSSSAIHSLV*VSGYEGQDSSNTIQ
Trigger: CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGCCGAAGAGGAGCTCCCACCTTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCGGCAGTGGGGAAGGTaGGAGCTCCTCTTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: STQFLSVINSRLMPLFDTRQWGR*ELLFGN
Trigger: ATTGCCGAAGAGGAGCTCCCACCTTCCCCACTGCCG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGCTGATGCCTCTGTTTaGCACCCCCTTCTGTTAAGA +
Preference number: 2 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFADASV*HPLLLR
Trigger: TCTTAACAGAAGGGGGTGTCAAACAGAGGCATCAGC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTGTAGCCCCATGCTGTaGCTCAAGGGACTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: STQFLSVINSRLMPLFDTCSPML*LKGLLP
Trigger: AGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR TCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCCGAATGAAACCACAATaGTGCTTGCTGATAGACACA +
Preference number: 2 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGRMKPQ*CLLIDT
Trigger: TGTGTCTATCAGCAAGCATCATTGTGGTTTCATTCG...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR GCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTTCTGTAGCCCCATaGTGTGGCTCAAGGGACTTC +
Preference number: 2 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTISVAP*CGSRDF
Trigger: GAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAAT...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCGGCAGTGGGGAAGGTaGGAGCTCCTCTTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINRQWGR*ELLFGN
Trigger: ATTGCCGAAGAGGAGCTCCCACCTTCCCCACTGCCG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCTGAACCATTTGGAATaGGACCTCAAGTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFLNHLE*DLKSVK
Trigger: TTTCACTGACTTGAGGTCTCATTCCAAATGGTTCAG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGCAAACCTGTTTATTaGGAATGGAGTCGAGAGACT +
Preference number: 2 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCKPVY*EWSRET
Trigger: AGTCTCTCGACTCCATTCTCAATAAACAGGTTTGCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCTGATGCCTCTGTTTaGCACCCCCTTCTGTTAAGA +
Preference number: 2 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKADASV*HPLLLR
Trigger: TCTTAACAGAAGGGGGTGTCAAACAGAGGCATCAGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPRIEHF*SLGCSH
Trigger: ATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACGGCAGTGGGGAAGGTaGGAGCTCCTCTTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKRQWGR*ELLFGN
Trigger: ATTGCCGAAGAGGAGCTCCCACCTTCCCCACTGCCG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 2 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCAAATTATGTTTTTCTaGGCTCTTAAACACCTCTGC +
Preference number: 2 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFQIMFF*ALKHLC
Trigger: GCAGAGGTGTTTAAGAGCCCAGAAAAACATAATTTG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR TCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQPSAKN*TFLISR
Trigger: CCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGG...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR GCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 2 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 2 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
3UTR-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACTGAACCATTTGGAATaGGACCTCAAGTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKLNHLE*DLKSVK
Trigger: TTTCACTGACTTGAGGTCTCATTCCAAATGGTTCAG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 2 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 2 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR TCA 72 bp TGTTGTAGCCATCCCGCTGGCTCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGCTGTCAACCACTGAGC +
Preference number: 3 (lower is better)
Translates to: CCSHPAGSDGAP*SASCLCCQPLS
Trigger: GCTCAGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGGCTACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR CCA 72 bp GGGCTGGCACCCAGCCATTTCTGTAGCCCCATGCTGTaGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: GLAPSHFCSPML*LKGLLPIFLSL
Trigger: CAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 72 bp CTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGAAGAACTGCTAACATC +
Preference number: 3 (lower is better)
Translates to: LSFKDLIARKGS*ARLSKGRTANI
Trigger: GATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR CAA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACACGAGAGACTAGATCCTaGATGAGTTCTGTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: SLLGRGAELGFPREELLTRETRS*MSSVSL
Trigger: CAGGGAAACAGAACTCATCAAGGATCTAGTCTCTCG...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 72 bp CACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACTaGGCGGCCATCAGCAAAGAATTGAACATTTCTGAT +
Preference number: 3 (lower is better)
Translates to: HPEAPLAYAVNH*AAISKELNISD
Trigger: ATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGCACACTTCTAGTATaGTTATTTCCCCCTAGGTAC +
Preference number: 3 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCTLLV*LFPPRY
Trigger: GTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
3UTR TCA 72 bp TTCGGCAATCCACTCACTAGTTTTGGTTTCGGGATATaGAGGCCAGGACTCGTCGAATACCATTCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: FGNPLTSFGFGI*RPGLVEYHSVC
Trigger: ACAGACTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 72 bp CCACTGAGCGGCCATCAGCAAAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCATATTCTGCAAACCTGT +
Preference number: 3 (lower is better)
Translates to: PLSGHQQRIEHF*SLGCSHILQTC
Trigger: ACAGGTTTGCAGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
3UTR TCA 72 bp ATGCTGTCAACCACTGAGCGGCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGGATGCAGCCATATTCT +
Preference number: 3 (lower is better)
Translates to: MLSTTERPSAKN*TFLISRMQPYS
Trigger: AGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACAGTGCCGCCTCCACCTaGCGCTCGCGGTACAGTCGG +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHSAAST*RSRYSR
Trigger: CCGACTGTACCGCGAGCGCCAGGTGGAGGCGGCACT...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp ACCAGCACCAGGCTGGGCCATTCGGGTTCATCTGAGGATCGGCGTCTTTCTCCGCCATCCCGCTGGCTCTaGTGGAGCACCCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TSTRLGHSGSSEDRRLSPPSRWL*WSTLKR
Trigger: GCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGG...CGGAGAAAGACGCCGATCCTCAGATGAACCCGAATGGCCCAGCCTGGTGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCCAGCCACCGCCGCCATaGCACCGAGCTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSQPPPP*HRAPDP
Trigger: AGGGTCAGGAGCTCGGTGGCATGGCGGCGGTGGCTG...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACCGCTCGCGCTGGGCCTaGAAACAACTTGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHRSRWA*KQLAEE
Trigger: CTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCG...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp ACCAGCACCAGGCTGGGCCATTCGGGTTCATCTGAGGATCGGCGTCTTTCTCCGGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TSTRLGHSGSSEDRRLSPARKGS*ARLSKG
Trigger: TCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGC...CGGAGAAAGACGCCGATCCTCAGATGAACCCGAATGGCCCAGCCTGGTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ACCAGCACCAGGCTGGGCCATTCGGGTTCATCTGAGGATCGGCGTCTTTCTCCGGCCAAGGCGTCTGCCTaGGTGAGCAGGACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TSTRLGHSGSSEDRRLSPAKASA*VSRTLL
Trigger: GAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGC...CGGAGAAAGACGCCGATCCTCAGATGAACCCGAATGGCCCAGCCTGGTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp ACCAGCACCAGGCTGGGCCATTCGGGTTCATCTGAGGATCGGCGTCTTTCTCCGCGGCAGTGGGGAAGGTaGGAGCTCCTCTTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: TSTRLGHSGSSEDRRLSPRQWGR*ELLFGN
Trigger: ATTGCCGAAGAGGAGCTCCCACCTTCCCCACTGCCG...CGGAGAAAGACGCCGATCCTCAGATGAACCCGAATGGCCCAGCCTGGTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCTGCTCAGCCACCAGCTaGTGCCGCTCGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSCSATS*CRSESC
Trigger: ACAGCTCTCCGAGCGGCAGCAGCTGGTGGCTGAGCA...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCGGTGCCGCTTGCAGTaGTACCCTCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSRCRLQ*YPRPGA
Trigger: CGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCG...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGGATCCCCAAGCAGTTaGCGCGCCGGCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPGSPSS*RAGLPP
Trigger: CGGCGGGAGGCCGGCGCGGCAACTGCTTGGGGATCC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACCTGTTCGATCCGTACTaGCTCCATGGGAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHLFDPY*LHGKRD
Trigger: GTCCCTCTTCCCATGGAGTCAGTACGGATCGAACAG...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCGTCTACTTGGGCCGCTaGTGCCCCTCGCTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSVYLGR*CPSLRR
Trigger: TCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGAC...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCGGTGCCGCTTGCAGTaGTACCCTCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFRCRLQ*YPRPGA
Trigger: CGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCCCTCGTGCCGGAGTTaGGACGCTCGCGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFPSCRS*DARAGP
Trigger: AGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCGTTGTACTTGAGCAGTaGCGCCTCCACCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSVVLEQ*RLHLAL
Trigger: GAGCGCCAGGTGGAGGCGGCACTGCTCAAGTACAAC...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCGGGCCCATGTCTACTTaGGCCGCTGATGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGGPMST*AADAPR
Trigger: GCGAGGGGCATCAGCGGCCCAAGTAGACATGGGCCC...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp ACCAGCACCAGGCTGGGCCATTCGGGTTCATCTGAGGATCGGCGTCTTTCTCCGCCCCTTCACTTTAGCTaGGTCCATCAGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSTRLGHSGSSEDRRLSPPLHFS*VHQTAA
Trigger: GGCAGCAGTCTGATGGACCCAGCTAAAGTGAAGGGG...CGGAGAAAGACGCCGATCCTCAGATGAACCCGAATGGCCCAGCCTGGTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACCCACCTTGCCTAGGGTaGCTAAGGCTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHPPCLG*LRLGLF
Trigger: GAAAAGCCCAAGCCTTAGCCACCCTAGGCAAGGTGG...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACTGTAGCCCCATGCTGTaGCTCAAGGGACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHCSPML*LKGLLP
Trigger: AGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACA...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGTCTACTTGGGCCGCTaGTGCCCCTCGCTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFVYLGR*CPSLRR
Trigger: TCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGAC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTTTGCTCTCCGGCGTTaGGGTCCCCGGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFFALRR*GPRRLL
Trigger: GAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCAGGCGTCTGCCTGCGTaGGCAGGACTTTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGRRLPA*AGLCSP
Trigger: CGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCT...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCAGCCACCGCCGCCATaGCACCGAGCTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFQPPPP*HRAPDP
Trigger: AGGGTCAGGAGCTCGGTGGCATGGCGGCGGTGGCTG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGCCAGCGCCTCGCCTTaGGGGACTTTCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFASASP*GTFSAR
Trigger: CCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCAGTCGGTTGCCCTCGTaGCGGAGTTGCGACGCTCGC +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSSRLPS*RSCDAR
Trigger: GCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACT...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCGTGCCTCCTCCACCTTaGCTAGGGTGGCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSVPPPP*LGWLRL
Trigger: AAGCCTTAGCCACCCTAGGCAAGGTGGAGGAGGCAC...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCACGCGCCCGCCCAGTaGCCACCATCAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFHAPAQ*PPSRRR
Trigger: TCTCCGCCTTGATGGTGGCCACTGGGCGGGCGCGTG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCAGTGCCGCCTCCACCTaGCGCTCGCGGTACAGTCGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSAAST*RSRYSR
Trigger: CCGACTGTACCGCGAGCGCCAGGTGGAGGCGGCACT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCAAGGCGGAGAGCTTaGCCCCGCACAGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSRRRA*PRTAHS
Trigger: GCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCCATCCCGCTGGCTCTaGTGGAGCACCCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFPSRWL*WSTLKR
Trigger: GCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCATCCCGCTGGCTCTaGTGGAGCACCCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPSRWL*WSTLKR
Trigger: GCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCTCCCAGGCGGCACTaGAAAGCGGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPPRRH*KAGQRR
Trigger: ACGCCTCTGTCCCGCTTTTCAGTGCCGCCTGGGAGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGAGGTCCCCGGAGACTaGTCTTGCTCTGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFEVPGD*SCSGSR
Trigger: GCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCAGCCACCAGCTGCTaGCGCTCGGAGAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFSATSC*RSESCL
Trigger: TAGACAGCTCTCCGAGCGGCAGCAGCTGGTGGCTGA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATGCCAGCGCCTCGCCTTaGGGGACTTTCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNASASP*GTFSAR
Trigger: CCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGC...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCTTCCGCCGCCACGGTaGCGCTTGCAGTGCTACCCT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPLPPPR*RLQCYP
Trigger: AGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCGTGCCGGAGTTaGGACGCTCGCGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTPSCRS*DARAGP
Trigger: AGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCCTCCTCCCCGGCATaGTTCGCCAGACACCGCGCC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTASSPA*FARHRA
Trigger: GGCGCGGTGTCTGGCGAAGCATGCCGGGGAGGAGGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACACCAAGTTGTCGCTGCTaGCCTCAGCGGGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLGRGAELGFPREELLTPSCRC*PQRASS
Trigger: TGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGG...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCTGCCTCGTTGTACTTaGGCAGTGCCGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSLPRCT*AVPPPP
Trigger: AGGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAG...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTGCAGGTTTGTCCCCCTaGTCAGTGGGAGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFAGLSP*SVGGSC
Trigger: GCAAGATCCTCCCACTGATCAGGGGGACAAACCTGC...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFSDGAP*SASCLC
Trigger: GCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCAGGTGCGGGGCCCTCTaGAGCCACCTTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTRCGAL*SHLWVG
Trigger: CCCCACCCAAAGGTGGCTGCAGAGGGCCCCGCACCT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCGAGGTCCCCGGAGACTaGTCTTGCTCTGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTEVPGD*SCSGSR
Trigger: GCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTC...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGCTCAGCCACCAGCTaGTGCCGCTCGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCSATS*CRSESC
Trigger: ACAGCTCTCCGAGCGGCAGCAGCTGGTGGCTGAGCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGCGCCACGGTGCCGCTTaGAGTGCTACCCTCGTCCGG +
Preference number: 4 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQRHGAA*SATLVR
Trigger: CCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCG...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATCGCGGTACAGTCGGTTaGCCTCGTGCCGGAGTTGCG +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNRGTVG*PRAGVA
Trigger: CGCAACTCCGGCACGAGGGCAACCGACTGTACCGCG...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACTCAGTGGGAGGATCTTaGTTGGAGGCTTTATTAGGC +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHSVGGS*LEALLG
Trigger: GCCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGA...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCGCTCGCGCTGGGCCTaGAAACAACTTGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPRSRWA*KQLAEE
Trigger: CTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCAGCAGCCACTTCCTaGGTCCAGGCGTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSAATS*VQAWWV
Trigger: GACCCACCACGCCTGGACCCAGGAAGTGGCTGCTGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCTGCCTCGTTGTACTTaGGCAGTGCCGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPLPRCT*AVPPPP
Trigger: AGGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACGGCATGGGACCAAAGTaGTTGAGTATCCGATTCTTT +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHGMGPK*LSIRFF
Trigger: AAAGAATCGGATACTCAATCACTTTGGTCCCATGCC...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPARKGS*ARLSKG
Trigger: TCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGGACGCCAAGGCGTCTaGCTGCGTGAGCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFGRQGV*LREQDF
Trigger: AAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGGACGCCAAGGCGTCTaGCTGCGTGAGCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPGRQGV*LREQDF
Trigger: AAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCCTCGTGCCGGAGTTaGGACGCTCGCGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKPSCRS*DARAGP
Trigger: AGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGGTCCATCAGACTGCTaGCATCTCCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPGPSDC*HLPWLL
Trigger: CAGCAGCCAGGGGAGATGGCAGCAGTCTGATGGACC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACGTGAAAGACCGTCTTTaGACAATGGACACTTTGCGT +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHVKDRL*TMDTLR
Trigger: ACGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCAC...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCAAGGAGTGGCAGCTaGAGGAAATCGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPARSGS*RKSGQP
Trigger: TGGCTGCCCCGATTTCCTCCAGCTGCCACTCCTTGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGGGCCCATGTCTACTTaGGCCGCTGATGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTGPMST*AADAPR
Trigger: GCGAGGGGCATCAGCGGCCCAAGTAGACATGGGCCC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCAGCCACCTTTGGGTaGGGGCCCATGTCTACTTGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPAATFG*GPMSTW
Trigger: CCAAGTAGACATGGGCCCCCACCCAAAGGTGGCTGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCTCTGCAGCCACCTTTaGGTGGGGGCCCATGTCTAC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPLCSHL*VGAHVY
Trigger: GTAGACATGGGCCCCCACCCAAAGGTGGCTGCAGAG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTGCGACGCTCGCGCTaGGCCTGGAAACAACTTGCC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPLRRSR*AWKQLA
Trigger: GGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCTGTCCCCCTGATCAGTaGGAGGATCTTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGCPPDQ*EDLAWR
Trigger: CCTCCAAGCAAGATCCTCCCACTGATCAGGGGGACA...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTCCTGGGTCCAGGCGTaGTGGGTCAGAGAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSWVQA*WVRERL
Trigger: GAGCCGCTCTCTGACCCACCACGCCTGGACCCAGGA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCAGGCGTCTGCCTGCGTaGGCAGGACTTTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTRRLPA*AGLCSP
Trigger: CGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACAGCTGCTGCTTCCTCCTaGCTAGAACAATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLGRGAELGFPREELLTAAASS*LEQCGS
Trigger: GCTCCCACATTGTTCTAGTCAGGAGGAAGCAGCAGC...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCAGGTTTGTCCCCCTaGTCAGTGGGAGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPAGLSP*SVGGSC
Trigger: GCAAGATCCTCCCACTGATCAGGGGGACAAACCTGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFSDGAP*SASCLC
Trigger: GCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSDGAP*SASCLC
Trigger: GCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACCGAATGAAACCACAATaGTGCTTGCTGATAGACACA +
Preference number: 4 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHRMKPQ*CLLIDT
Trigger: TGTGTCTATCAGCAAGCATCATTGTGGTTTCATTCG...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGCCCACGTTACCCTTaGAGCTGCAAAGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCPRYP*SCKAHP
Trigger: TGGGTGGGCTTTGCAGCTTCAAGGGTAACGTGGGCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCACAGGCAGTGCCCTTTaGCAGGATCTCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSTGSAL*QDLQGT
Trigger: TGTGCCTTGGAGATCCTGTCAAAGGGCACTGCCTGT...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATGGACGCCAAGGCGTCTaGCTGCGTGAGCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNGRQGV*LREQDF
Trigger: AAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCC...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCTGGAGCCAACTTAACTaGCTCGTTGTACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSWSQLN*LVVLEQ
Trigger: CTGCTCAAGTACAACGAGGCAGTTAAGTTGGCTCCA...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCGGTCCATCAGACTGCTaGCATCTCCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTGPSDC*HLPWLL
Trigger: CAGCAGCCAGGGGAGATGGCAGCAGTCTGATGGACC...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCAGCGCCTCTTGCCTATaGTGTCAACCACTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFSASCL*CQPLSG
Trigger: GCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCAGCGCCTCTTGCCTATaGTGTCAACCACTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSASCL*CQPLSG
Trigger: GCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCGCAAGGAGTGGCAGCTaGAGGAAATCGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTARSGS*RKSGQP
Trigger: TGGCTGCCCCGATTTCCTCCAGCTGCCACTCCTTGC...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATGCAGCCACCTTTGGGTaGGGGCCCATGTCTACTTGG +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNAATFG*GPMSTW
Trigger: CCAAGTAGACATGGGCCCCCACCCAAAGGTGGCTGC...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCACGCGCCCGCCCAGTaGCCACCATCAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKHAPAQ*PPSRRR
Trigger: TCTCCGCCTTGATGGTGGCCACTGGGCGGGCGCGTG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCGCTCGCGCTGGGCCTaGAAACAACTTGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTRSRWA*KQLAEE
Trigger: CTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAGTGCCGCCTCCACCTaGCGCTCGCGGTACAGTCGG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSAAST*RSRYSR
Trigger: CCGACTGTACCGCGAGCGCCAGGTGGAGGCGGCACT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
3UTR CAA 72 bp GGTGGGAGCTCCTCTTCGGCAATCCACTCACTAGTTTaGGTTTCGGGATATGAAGGCCAGGACTCGTCGAAT +
Preference number: 4 (lower is better)
Translates to: GGSSSSAIHSLV*VSGYEGQDSSN
Trigger: ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGCCGAAGAGGAGCTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCAAGGCGGAGAGCTTaGCCCCGCACAGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSRRRA*PRTAHS
Trigger: GCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCTGCTGCTTCCTCCTaGCTAGAACAATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPAAASS*LEQCGS
Trigger: GCTCCCACATTGTTCTAGTCAGGAGGAAGCAGCAGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTARKGS*ARLSKG
Trigger: TCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTGGTTTCGGGATATaGAGGCCAGGACTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGFGFGI*RPGLVE
Trigger: TTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAA...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAGCGGGACAGAGGCGTaGCCCATTCGTAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSGTEA*PIRSQP
Trigger: GGGCTGGCTACGAATGGGTCACGCCTCTGTCCCGCT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAGGTGCGGGGCCCTCTaGAGCCACCTTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQERCGAL*SHLWVG
Trigger: CCCCACCCAAAGGTGGCTGCAGAGGGCCCCGCACCT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCAGCGCCTCGCCTTaGGGGACTTTCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEASASP*GTFSAR
Trigger: CCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACGCCACGGTGCCGCTTaGAGTGCTACCCTCGTCCGG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQERHGAA*SATLVR
Trigger: CCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCCCTCGTGCCGGAGTTaGGACGCTCGCGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINPSCRS*DARAGP
Trigger: AGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAGTCGGTTGCCCTCGTaGCGGAGTTGCGACGCTCGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSRLPS*RSCDAR
Trigger: GCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTCGGGCGGAGCTTACATaGTATTTCTGCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFRAELT*YFCIMQ
Trigger: CTGCATGATGCAGAAATAGCATGTAAGCTCCGCCCG...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGGTCCATCAGACTGCTaGCATCTCCCCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTGPSDC*HLPWLL
Trigger: CAGCAGCCAGGGGAGATGGCAGCAGTCTGATGGACC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCAGCGCCTCTTGCCTATaGTGTCAACCACTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTSASCL*CQPLSG
Trigger: GCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCT...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTATTTCTGTAGCCCCATaGTGTGGCTCAAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFISVAP*CGSRDF
Trigger: GAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAAT...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCACACGAAGCAAGGAGTaGCAGCTGGAGGAAATCGGG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFTRSKE*QLEEIG
Trigger: CCCGATTTCCTCCAGCTGCCACTCCTTGCTTCGTGT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCACACGAAGCAAGGAGTaGCAGCTGGAGGAAATCGGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPTRSKE*QLEEIG
Trigger: CCCGATTTCCTCCAGCTGCCACTCCTTGCTTCGTGT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATTCCGTACTGACTCCATaGGAAGAGGGACACGGGAGG +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNSVLTP*EEGHGR
Trigger: CCTCCCGTGTCCCTCTTCCCATGGAGTCAGTACGGA...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCTCTGCAGCCACCTTTaGGTGGGGGCCCATGTCTAC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTLCSHL*VGAHVY
Trigger: GTAGACATGGGCCCCCACCCAAAGGTGGCTGCAGAG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACACGCGCCCGCCCAGTaGCCACCATCAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEHAPAQ*PPSRRR
Trigger: TCTCCGCCTTGATGGTGGCCACTGGGCGGGCGCGTG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTTGCGACGCTCGCGCTaGGCCTGGAAACAACTTGCC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTLRRSR*AWKQLA
Trigger: GGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCCCTTCACTTTAGCTaGGTCCATCAGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPLHFS*VHQTAA
Trigger: GGCAGCAGTCTGATGGACCCAGCTAAAGTGAAGGGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
52% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGTCCCCCTGATCAGTaGGAGGATCTTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCPPDQ*EDLAWR
Trigger: CCTCCAAGCAAGATCCTCCCACTGATCAGGGGGACA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGCCACCAGCACCAGGCTaGGCCATTCGGGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQPPAPG*AIRVHL
Trigger: CAGATGAACCCGAATGGCCCAGCCTGGTGCTGGTGG...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCCACCTTGCCTAGGGTaGCTAAGGCTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFPPCLG*LRLGLF
Trigger: GAAAAGCCCAAGCCTTAGCCACCCTAGGCAAGGTGG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCACCTTGCCTAGGGTaGCTAAGGCTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPPCLG*LRLGLF
Trigger: GAAAAGCCCAAGCCTTAGCCACCCTAGGCAAGGTGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR CCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCCTGACTAGAACAATGTaGGAGCTCCAGATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSLTRTM*ELQIVS
Trigger: AGAGACAATCTGGAGCTCCCACATTGTTCTAGTCAG...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCAAACTGCCAGAGCTaGGCAACACCGGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKANCQS*ATPAGG
Trigger: GCCGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGTCTACTTGGGCCGCTaGTGCCCCTCGCTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINVYLGR*CPSLRR
Trigger: TCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGAC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTTTGCTCTCCGGCGTTaGGGTCCCCGGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKFALRR*GPRRLL
Trigger: GAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSDGAP*SASCLC
Trigger: GCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACCATCCCGCTGGCTCTaGTGGAGCACCCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEPSRWL*WSTLKR
Trigger: GCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCAGCCACCGCCGCCATaGCACCGAGCTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINQPPPP*HRAPDP
Trigger: AGGGTCAGGAGCTCGGTGGCATGGCGGCGGTGGCTG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACCCGGAGACTGCTCTTaGTCTGGCTCCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEPGDCS*SGSRVG
Trigger: ACCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTGCTCAGCCACCAGCTaGTGCCGCTCGGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKCSATS*CRSESC
Trigger: ACAGCTCTCCGAGCGGCAGCAGCTGGTGGCTGAGCA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCGCCACGGTGCCGCTTaGAGTGCTACCCTCGTCCGG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINRHGAA*SATLVR
Trigger: CCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACTTCCGCCGCCACGGTaGCGCTTGCAGTGCTACCCT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQELPPPR*RLQCYP
Trigger: AGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACGCGGTACAGTCGGTTaGCCTCGTGCCGGAGTTGCG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQERGTVG*PRAGVA
Trigger: CGCAACTCCGGCACGAGGGCAACCGACTGTACCGCG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCATCTCCCCTGGCTGCTaGTTCCTCCTGACTAGAACA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFISPGC*FLLTRT
Trigger: TGTTCTAGTCAGGAGGAAGCAGCAGCCAGGGGAGAT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGATCTCCAAGGCACATaGCAAACTGTCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFDLQGT*QTVSCL
Trigger: CAGGCACGAGACAGTTTGGCATGTGCCTTGGAGATC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGATCTCCAAGGCACATaGCAAACTGTCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPDLQGT*QTVSCL
Trigger: CAGGCACGAGACAGTTTGGCATGTGCCTTGGAGATC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCGGCTTTTCTGAAATGTaGCTTAAAACCCATCGGGCG +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGGFSEM*LKTHRA
Trigger: CGCCCGATGGGTTTTAAGGCACATTTCAGAAAAGCC...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGGCTCAAGGGACTTCTaGCTATTTTCCTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPGSRDF*LFSCPW
Trigger: CCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTCCGTACTGACTCCATaGGAAGAGGGACACGGGAGG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSVLTP*EEGHGR
Trigger: CCTCCCGTGTCCCTCTTCCCATGGAGTCAGTACGGA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTAGTTTACAAAAGGTGTaGCCACACGACAAGGACACG +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFSLQKV*PHDKDT
Trigger: CGTGTCCTTGTCGTGTGGCCACACCTTTTGTAAACT...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCTCCTCTTCTTCCTaGTCTTTCATGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLGRGAELGFPREELLTSSSSS*SFMWCC
Trigger: GCAGCACCACATGAAAGACCAGGAAGAAGAGGAGGA...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCGCTGGAAGCAGCTTTTaGAGAGGTAGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSAGSSF*RGSIPL
Trigger: AAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGC...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATGGGTCCAGGCGTGGTaGGTCAGAGAGCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEWVQAW*VRERLP
Trigger: AGGGAGCCGCTCTCTGACCCACCACGCCTGGACCCA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCAAGTTGTCGCTGCTaGCCTCAGCGGGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKPSCRC*PQRASS
Trigger: TGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATTTGCTCTCCGGCGTTaGGGTCCCCGGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEFALRR*GPRRLL
Trigger: GAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTCAAGGCGGAGAGCTTaGCCCCGCACAGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINSRRRA*PRTAHS
Trigger: GCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCTGCCTCGTTGTACTTaGGCAGTGCCGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKLPRCT*AVPPPP
Trigger: AGGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCTGCTGCTTCCTCCTaGCTAGAACAATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTAAASS*LEQCGS
Trigger: GCTCCCACATTGTTCTAGTCAGGAGGAAGCAGCAGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTTCATGTGGTGCTGCTaGCCATCCCCCTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFFMWCC*PSPFTL
Trigger: TAAAGTGAAGGGGGATGGTCAGCAGCACCACATGAA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCATGCAAGTGGTAAACTaGGAGCAGGTTTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPMQVVN*EQVCPP
Trigger: AGGGGGACAAACCTGCTCTCAGTTTACCACTTGCAT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCATGCAAGTGGTAAACTaGGAGCAGGTTTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFMQVVN*EQVCPP
Trigger: AGGGGGACAAACCTGCTCTCAGTTTACCACTTGCAT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCCCGCAAGGTGTTGTaGCTGGCTCATAGAATAATC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPARKVL*LAHRII
Trigger: GATTATTCTATGAGCCAGTCACAACACCTTGCGGGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCGGACACTTTGCGTTGTaGTCTAGGCATCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSGHFAL*SRHLSR
Trigger: CCTAGAAAGATGCCTAGATCACAACGCAAAGTGTCC...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTATGCTGTCAACCACTaGGCGGCCATCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFYAVNH*AAISKE
Trigger: TTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCGATAATTTGAGCGAATaGAACCACAATGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSDNLSE*NHNDAC
Trigger: GCAAGCATCATTGTGGTTTCATTCGCTCAAATTATC...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTGGGACCAAAGTGATTaGGTATCCGATTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFWDQSD*VSDSLG
Trigger: CCCTAAAGAATCGGATACTCAATCACTTTGGTCCCA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTTTGGTTTCGGGATATaGAGGCCAGGACTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFFGFGI*RPGLVE
Trigger: TTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGCTGATGCCTCTGTTTaGCACCCCCTTCTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPADASV*HPLLLR
Trigger: TCTTAACAGAAGGGGGTGTCAAACAGAGGCATCAGC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCCTTTAATCTAGGGTaGGGTGCCAACAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSFNLG*GANSFR
Trigger: CCTGAAGCTGTTGGCACCTCACCCTAGATTAAAGGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCCCGGAGACTGCTCTTaGTCTGGCTCCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINPGDCS*SGSRVG
Trigger: ACCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGAGGTCCCCGGAGACTaGTCTTGCTCTGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINEVPGD*SCSGSR
Trigger: GCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACGGTGCCGCTTGCAGTaGTACCCTCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKRCRLQ*YPRPGA
Trigger: CGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCTTCCGCCGCCACGGTaGCGCTTGCAGTGCTACCCT +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINLPPPR*RLQCYP
Trigger: AGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAGTCGGTTGCCCTCGTaGCGGAGTTGCGACGCTCGC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINSRLPS*RSCDAR
Trigger: GCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACT...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCGCGGTACAGTCGGTTaGCCTCGTGCCGGAGTTGCG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINRGTVG*PRAGVA
Trigger: CGCAACTCCGGCACGAGGGCAACCGACTGTACCGCG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGTTGTACTTGAGCAGTaGCGCCTCCACCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKVVLEQ*RLHLAL
Trigger: GAGCGCCAGGTGGAGGCGGCACTGCTCAAGTACAAC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCGGGCGGAGCTTACATaGTATTTCTGCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPRAELT*YFCIMQ
Trigger: CTGCATGATGCAGAAATAGCATGTAAGCTCCGCCCG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCGTGCCTGTCTCAATaGATCTACGAATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SLLGRGAELGFPREELLTSCLSQ*IYESSG
Trigger: GCCTGATGATTCGTAGATGCATTGAGACAGGCACGA...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATGCCAAACTGTCTCGTaGCTGTCTCAATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: SLLGRGAELGFPREELLTCQTVS*LSQCIY
Trigger: GTAGATGCATTGAGACAGGCACGAGACAGTTTGGCA...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTTGCGACGCTCGCGCTaGGCCTGGAAACAACTTGCC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKLRRSR*AWKQLA
Trigger: GGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCTTCACTTTAGCTaGGTCCATCAGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTPLHFS*VHQTAA
Trigger: GGCAGCAGTCTGATGGACCCAGCTAAAGTGAAGGGG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCCTCCTCTTCTTCCTaGTCTTTCATGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSSSSS*SFMWCC
Trigger: GCAGCACCACATGAAAGACCAGGAAGAAGAGGAGGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTCCTCCTCTTCTTCCTaGTCTTTCATGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFSSSSS*SFMWCC
Trigger: GCAGCACCACATGAAAGACCAGGAAGAAGAGGAGGA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGCTGGAAGCAGCTTTTaGAGAGGTAGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFAGSSF*RGSIPL
Trigger: AAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTGTCCCCCTGATCAGTaGGAGGATCTTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTCPPDQ*EDLAWR
Trigger: CCTCCAAGCAAGATCCTCCCACTGATCAGGGGGACA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCACCAGCACCAGGCTaGGCCATTCGGGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKPPAPG*AIRVHL
Trigger: CAGATGAACCCGAATGGCCCAGCCTGGTGCTGGTGG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCGGCAGTGGGGAAGGTaGGAGCTCCTCTTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKRQWGR*ELLFGN
Trigger: ATTGCCGAAGAGGAGCTCCCACCTTCCCCACTGCCG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCAGGTTTGTCCCCCTaGTCAGTGGGAGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKAGLSP*SVGGSC
Trigger: GCAAGATCCTCCCACTGATCAGGGGGACAAACCTGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGCACAATCCTCTCCCTaGACCTTTTGGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFAQSSP*TFWSSM
Trigger: CATTGAAGACCAAAAGGTTCAGGGAGAGGATTGTGC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCAGTTATGTAATCCCATaGGCTCAGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: HFCSPMLWLKGLLPIFLSSYVIP*AQHNPL
Trigger: GAGAGGATTGTGCTGAGCTCATGGGATTACATAACT...GGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEARKGS*ARLSKG
Trigger: TCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCAAGGCGTCTGCCTaGGTGAGCAGGACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEAKASA*VSRTLL
Trigger: GAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATCAGCCACCAGCTGCTaGCGCTCGGAGAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQESATSC*RSESCL
Trigger: TAGACAGCTCTCCGAGCGGCAGCAGCTGGTGGCTGA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGGAGCCAACTTAACTaGCTCGTTGTACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFWSQLN*LVVLEQ
Trigger: CTGCTCAAGTACAACGAGGCAGTTAAGTTGGCTCCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGGAGCCAACTTAACTaGCTCGTTGTACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPWSQLN*LVVLEQ
Trigger: CTGCTCAAGTACAACGAGGCAGTTAAGTTGGCTCCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCATCTCCCCTGGCTGCTaGTTCCTCCTGACTAGAACA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTISPGC*FLLTRT
Trigger: TGTTCTAGTCAGGAGGAAGCAGCAGCCAGGGGAGAT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGATCTCCCCTGGCTGCTaGTTCCTCCTGACTAGAACA +
Preference number: 4 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQISPGC*FLLTRT
Trigger: TGTTCTAGTCAGGAGGAAGCAGCAGCCAGGGGAGAT...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGGCATTTTCCAGTCTTaGTGGAAGCAGCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPGIFQS*WKQLLE
Trigger: CTCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGGCATTTTCCAGTCTTaGTGGAAGCAGCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFGIFQS*WKQLLE
Trigger: CTCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCAGTGGGAGGATCTTaGTTGGAGGCTTTATTAGGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSVGGS*LEALLG
Trigger: GCCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCGTGCCTGTCTCAATaGATCTACGAATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSCLSQ*IYESSG
Trigger: GCCTGATGATTCGTAGATGCATTGAGACAGGCACGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGCCAAACTGTCTCGTaGCTGTCTCAATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCQTVS*LSQCIY
Trigger: GTAGATGCATTGAGACAGGCACGAGACAGTTTGGCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGCCAAACTGTCTCGTaGCTGTCTCAATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCQTVS*LSQCIY
Trigger: GTAGATGCATTGAGACAGGCACGAGACAGTTTGGCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGATCTCCAAGGCACATaGCAAACTGTCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTDLQGT*QTVSCL
Trigger: CAGGCACGAGACAGTTTGGCATGTGCCTTGGAGATC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGGCTTTTCTGAAATGTaGCTTAAAACCCATCGGGCG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPGFSEM*LKTHRA
Trigger: CGCCCGATGGGTTTTAAGGCACATTTCAGAAAAGCC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGTGCCTCCTCCACCTTaGCTAGGGTGGCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKVPPPP*LGWLRL
Trigger: AAGCCTTAGCCACCCTAGGCAAGGTGGAGGAGGCAC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCAAGGAGTGGCAGCTaGAGGAAATCGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEARSGS*RKSGQP
Trigger: TGGCTGCCCCGATTTCCTCCAGCTGCCACTCCTTGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACTCTGCAGCCACCTTTaGGTGGGGGCCCATGTCTAC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQELCSHL*VGAHVY
Trigger: GTAGACATGGGCCCCCACCCAAAGGTGGCTGCAGAG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCGCTCGCGCTGGGCCTaGAAACAACTTGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINRSRWA*KQLAEE
Trigger: CTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCTTCCTTCAGTTCTTCTaGAAGGAATTTAGCTATGAG +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSFLQFF*KEFSYE
Trigger: CTCATAGCTAAATTCCTTCCAGAAGAACTGAAGGAA...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACCACCAGCACCAGGCTaGGCCATTCGGGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEPPAPG*AIRVHL
Trigger: CAGATGAACCCGAATGGCCCAGCCTGGTGCTGGTGG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCCAAATTATGTTTTTCTaGGCTCTTAAACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRGAELGFPREELLTSTSQIMFF*ALKHLC
Trigger: GCAGAGGTGTTTAAGAGCCCAGAAAAACATAATTTG...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACAGAGAGCGGCTCCCTaGGGAAATTCGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEQRAAP*GNSGAL
Trigger: TAGGGCACCCGAATTTCCCCAGGGAGCCGCTCTCTG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCTGACTAGAACAATGTaGGAGCTCCAGATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPLTRTM*ELQIVL
Trigger: CAGGACAATCTGGAGCTCCCACATTGTTCTAGTCAG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCTGCTGCTTCCTCCTaGCTAGAACAATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKAAASS*LEQCGS
Trigger: GCTCCCACATTGTTCTAGTCAGGAGGAAGCAGCAGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCCCGCAAGGTGTTGTaGCTGGCTCATAGAATAATC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTARKVL*LAHRII
Trigger: GATTATTCTATGAGCCAGTCACAACACCTTGCGGGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGGCCCGCAAGGTGTTGTaGCTGGCTCATAGAATAATC +
Preference number: 4 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQARKVL*LAHRII
Trigger: GATTATTCTATGAGCCAGTCACAACACCTTGCGGGC...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGPSAKN*TFLISR
Trigger: CCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGG...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTATGCTGTCAACCACTaGGCGGCCATCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTYAVNH*AAISKE
Trigger: TTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATCTGATGGAGCACCCTaGAGCGCCTCTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQESDGAP*SASCLC
Trigger: GCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACCATCCCGCTGGCTCTaGTGGAGCACCCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKPSRWL*WSTLKR
Trigger: GCGCTTCAGGGTGCTCCATCAGAGCCAGCGGGATGG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCGCACAATCCTCTCCCTaGACCTTTTGGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTAQSSP*TFWSSM
Trigger: CATTGAAGACCAAAAGGTTCAGGGAGAGGATTGTGC...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCAGTTATGTAATCCCATaGGCTCAGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSYVIP*AQHNPL
Trigger: GAGAGGATTGTGCTGAGCTCATGGGATTACATAACT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGGGACCAAAGTGATTaGGTATCCGATTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPWDQSD*VSDSLG
Trigger: CCCTAAAGAATCGGATACTCAATCACTTTGGTCCCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTTTGGTTTCGGGATATaGAGGCCAGGACTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTFGFGI*RPGLVE
Trigger: TTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCTGATGCCTCTGTTTaGCACCCCCTTCTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTADASV*HPLLLR
Trigger: TCTTAACAGAAGGGGGTGTCAAACAGAGGCATCAGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCGGGAGAATGTTCCTaGGAATCCCCCGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSGECS*ESPGTD
Trigger: ATCAGTCCCGGGGGATTCTCAGGAACATTCTCCCGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTCAGCCACCAGCTGCTaGCGCTCGGAGAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINSATSC*RSESCL
Trigger: TAGACAGCTCTCCGAGCGGCAGCAGCTGGTGGCTGA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCGGGCGGAGCTTACATaGTATTTCTGCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTRAELT*YFCIMQ
Trigger: CTGCATGATGCAGAAATAGCATGTAAGCTCCGCCCG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATGGCATTTTCCAGTCTTaGTGGAAGCAGCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNGIFQS*WKQLLE
Trigger: CTCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCC...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTTTAAGCAAAAAGTATaGCCGCAAGGTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFFKQKV*PQGVVT
Trigger: AGTCACAACACCTTGCGGGCATACTTTTTGCTTAAA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGTGAAAGACCGTCTTTaGACAATGGACACTTTGCGT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPVKDRL*TMDTLR
Trigger: ACGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCAC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGATGCAGCCATATTCTaGAAACCCTTTGACAGGATC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFDAAIF*KPFDRI
Trigger: GATCCTGTCAAAGGGTTTGCAGAATATGGCTGCATC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAGCGCCTCTTGCCTATaGTGTCAACCACTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQESASCL*CQPLSG
Trigger: GCCGCTCAGTGGTTGACAGCATAGGCAAGAGGCGCT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGCAGCCACCTTTGGGTaGGGGCCCATGTCTACTTGG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINAATFG*GPMSTW
Trigger: CCAAGTAGACATGGGCCCCCACCCAAAGGTGGCTGC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCCCTTCACTTTAGCTaGGTCCATCAGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKPLHFS*VHQTAA
Trigger: GGCAGCAGTCTGATGGACCCAGCTAAAGTGAAGGGG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCTGGAAGCAGCTTTTaGAGAGGTAGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTAGSSF*RGSIPL
Trigger: AAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCATTTTCCAGTCTTGCTaGAAGCAGCTTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPIFQSC*KQLLER
Trigger: CCTCTCCAAAAGCTGCTTCCAGCAAGACTGGAAAAT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCACCGTCTTTGCACAATaGACACTTTGCGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFTVFAQ*TLCVVI
Trigger: GATCACAACGCAAAGTGTCCATTGTGCAAAGACGGT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCCAGATTGTCTCTTTaGGCTTCACATCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSRLSL*ASHLAL
Trigger: GAGAGCAAGATGTGAAGCCCAAAGAGACAATCTGGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCTGACTAGAACAATGTaGGAGCTCCAGATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFLTRTM*ELQIVS
Trigger: AGAGACAATCTGGAGCTCCCACATTGTTCTAGTCAG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACTGGGCAACACCGGCTaGCGGCTCAGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKLGNTG*RLSSHF
Trigger: GAAGTGGCTGCTGAGCCGCCAGCCGGTGTTGCCCAG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACCACGGCCGAGCTCCTaGCAAACTGCCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKPRPSS*QTARAG
Trigger: CCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTGG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCTGATAGAAACCCATaGCATTTCCGGCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSDRNP*HFRHLK
Trigger: CTTTAAGTGCCGGAAATGTCATGGGTTTCTATCAGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGCAGGTTTGTCCCCCTaGTCAGTGGGAGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINAGLSP*SVGGSC
Trigger: GCAAGATCCTCCCACTGATCAGGGGGACAAACCTGC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGGACACTTTGCGTTGTaGTCTAGGCATCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTGHFAL*SRHLSR
Trigger: CCTAGAAAGATGCCTAGATCACAACGCAAAGTGTCC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCATTCTGCAAACCCTTTaGCAGGATCTCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTILQTL*QDLQGT
Trigger: TGTGCCTTGGAGATCCTGTCAAAGGGTTTGCAGAAT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCACAATCCTCTCCCTaGACCTTTTGGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTAQSSP*TFWSSM
Trigger: CATTGAAGACCAAAAGGTTCAGGGAGAGGATTGTGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCGAATGAAACCACAATaGTGCTTGCTGATAGACACA +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPRMKPQ*CLLIDT
Trigger: TGTGTCTATCAGCAAGCATCATTGTGGTTTCATTCG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGCAAACCTGTTTATTaGGAATGGAGTCGAGAGACT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCKPVY*EWSRET
Trigger: AGTCTCTCGACTCCATTCTCAATAAACAGGTTTGCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATCTCCCCTGGCTGCTaGTTCCTCCTGACTAGAACA +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKISPGC*FLLTRT
Trigger: TGTTCTAGTCAGGAGGAAGCAGCAGCCAGGGGAGAT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTCAGTGGGAGGATCTTaGTTGGAGGCTTTATTAGGC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSVGGS*LEALLG
Trigger: GCCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTCGTGCCTGTCTCAATaGATCTACGAATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSCLSQ*IYESSG
Trigger: GCCTGATGATTCGTAGATGCATTGAGACAGGCACGA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGATCTCCAAGGCACATaGCAAACTGTCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKDLQGT*QTVSCL
Trigger: CAGGCACGAGACAGTTTGGCATGTGCCTTGGAGATC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 4 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGTCATTTGGAGCTGTTaGAAGCTTGAGTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFVIWSC*KLEWRL
Trigger: TAATCTCCACTCAAGCTTGCAACAGCTCCAAATGAC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATGTCCCCCTGATCAGTaGGAGGATCTTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQECPPDQ*EDLAWR
Trigger: CCTCCAAGCAAGATCCTCCCACTGATCAGGGGGACA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCACCGTCTTTGCACAATaGACACTTTGCGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTTVFAQ*TLCVVI
Trigger: GATCACAACGCAAAGTGTCCATTGTGCAAAGACGGT...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGTTGCAAGCTTGAGTaGAGATTAAACACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCCKLE*RLNTWR
Trigger: TCTCCACGTGTTTAATCTCCACTCAAGCTTGCAACA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CCA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACACTATTTTCCTGTCCCTaGGTTACAGCTTCAATTACA +
Preference number: 4 (lower is better)
Translates to: SLLGRGAELGFPREELLTLFSCP*VTASIT
Trigger: TGTAATTGAAGCTGTAACCCAGGGACAGGAAAATAG...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACCAAGTTGTCGCTGCTaGCCTCAGCGGGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKPSCRC*PQRASS
Trigger: TGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACTGCCTCGTTGTACTTaGGCAGTGCCGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKLPRCT*AVPPPP
Trigger: AGGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTTCATGTGGTGCTGCTaGCCATCCCCCTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKFMWCC*PSPFTL
Trigger: TAAAGTGAAGGGGGATGGTCAGCAGCACCACATGAA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATGCAAGTGGTAAACTaGGAGCAGGTTTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKMQVVN*EQVCPP
Trigger: AGGGGGACAAACCTGCTCTCAGTTTACCACTTGCAT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFRIEHF*SLGCSH
Trigger: ATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFPSAKN*TFLISR
Trigger: CCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTATGCTGTCAACCACTaGGCGGCCATCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKYAVNH*AAISKE
Trigger: TTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCAGTTATGTAATCCCATaGGCTCAGCACAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSYVIP*AQHNPL
Trigger: GAGAGGATTGTGCTGAGCTCATGGGATTACATAACT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCGATAATTTGAGCGAATaGAACCACAATGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPDNLSE*NHNDAC
Trigger: GCAAGCATCATTGTGGTTTCATTCGCTCAAATTATC...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGATAATTTGAGCGAATaGAACCACAATGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFDNLSE*NHNDAC
Trigger: GCAAGCATCATTGTGGTTTCATTCGCTCAAATTATC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGGCATGGGACCAAAGTaGTTGAGTATCCGATTCTTT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTGMGPK*LSIRFF
Trigger: AAAGAATCGGATACTCAATCACTTTGGTCCCATGCC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGCTAGGAAGGGGAGCTaGGCTCGGCTTTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKARKGS*ARLSKG
Trigger: TCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGCCAAGGCGTCTGCCTaGGTGAGCAGGACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKAKASA*VSRTLL
Trigger: GAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCTTACATGCTATTTCTaGATCATGCAGTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPLTCYF*IMQCIL
Trigger: GAGAATGCACTGCATGATGCAGAAATAGCATGTAAG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCTTACATGCTATTTCTaGATCATGCAGTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFLTCYF*IMQCIL
Trigger: GAGAATGCACTGCATGATGCAGAAATAGCATGTAAG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTTTAAGCAAAAAGTATaGCCGCAAGGTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFFKQKV*PQGVVT
Trigger: AGTCACAACACCTTGCGGGCATACTTTTTGCTTAAA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGTGAAAGACCGTCTTTaGACAATGGACACTTTGCGT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTVKDRL*TMDTLR
Trigger: ACGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCAC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATCTCCAAGGCACATaGCAAACTGTCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEDLQGT*QTVSCL
Trigger: CAGGCACGAGACAGTTTGGCATGTGCCTTGGAGATC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGATGCAGCCATATTCTaGAAACCCTTTGACAGGATC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTDAAIF*KPFDRI
Trigger: GATCCTGTCAAAGGGTTTGCAGAATATGGCTGCATC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACTGGGGAAATTCGGGTaGCCTAGTCTAGCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQELGKFG*PSLAGD
Trigger: ATCTCCAGCTAGACTAGGGCACCCGAATTTCCCCAG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCTGACTAGAACAATGTaGGAGCTCCAGATTGTCCTT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTLTRTM*ELQIVL
Trigger: AAGGACAATCTGGAGCTCCCACATTGTTCTAGTCAG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000439603.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCCTCCTCTTCTTCCTaGTCTTTCATGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSSSSS*SFMWCC
Trigger: GCAGCACCACATGAAAGACCAGGAAGAAGAGGAGGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCTGGAAGCAGCTTTTaGAGAGGTAGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKAGSSF*RGSIPL
Trigger: AAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCATTTTCCAGTCTTGCTaGAAGCAGCTTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTIFQSC*KQLLER
Trigger: CCTCTCCAAAAGCTGCTTCCAGCAAGACTGGAAAAT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGATTTTCCAGTCTTGCTaGAAGCAGCTTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQIFQSC*KQLLER
Trigger: CCTCTCCAAAAGCTGCTTCCAGCAAGACTGGAAAAT...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTGTCCCCCTGATCAGTaGGAGGATCTTGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINCPPDQ*EDLAWR
Trigger: CCTCCAAGCAAGATCCTCCCACTGATCAGGGGGACA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCACCGTCTTTGCACAATaGACACTTTGCGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTTVFAQ*TLCVVI
Trigger: GATCACAACGCAAAGTGTCCATTGTGCAAAGACGGT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACCACCAGCACCAGGCTaGGCCATTCGGGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKPPAPG*AIRVHL
Trigger: CAGATGAACCCGAATGGCCCAGCCTGGTGCTGGTGG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTGGAGATTAAACACGTaGAGACTCCGGCCCACACCC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINWRLNT*RLRPTP
Trigger: GGGTGTGGGCCGGAGTCTCCACGTGTTTAATCTCCA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGTCTGATAGAAACCCATaGCATTTCCGGCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQSDRNP*HFRHLK
Trigger: CTTTAAGTGCCGGAAATGTCATGGGTTTCTATCAGA...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCATGAGACTCCAAGGTaGAATAAATCTGAGACCGAT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTHETPR*NKSETD
Trigger: ATCGGTCTCAGATTTATTTCACCTTGGAGTCTCATG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATTCATGTGGTGCTGCTaGCCATCCCCCTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEFMWCC*PSPFTL
Trigger: TAAAGTGAAGGGGGATGGTCAGCAGCACCACATGAA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCCGCAAGGTGTTGTaGCTGGCTCATAGAATAATC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEARKVL*LAHRII
Trigger: GATTATTCTATGAGCCAGTCACAACACCTTGCGGGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATTCTGCAAACCCTTTaGCAGGATCTCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKILQTL*QDLQGT
Trigger: TGTGCCTTGGAGATCCTGTCAAAGGGTTTGCAGAAT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR TCA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTRIEHF*SLGCSH
Trigger: ATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCT...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATATGCTGTCAACCACTaGGCGGCCATCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEYAVNH*AAISKE
Trigger: TTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCACAATCCTCTCCCTaGACCTTTTGGTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKAQSSP*TFWSSM
Trigger: CATTGAAGACCAAAAGGTTCAGGGAGAGGATTGTGC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCGAATGAAACCACAATaGTGCTTGCTGATAGACACA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTRMKPQ*CLLIDT
Trigger: TGTGTCTATCAGCAAGCATCATTGTGGTTTCATTCG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCTTTAGGGATAATTTaGGCGAATGAAACCACAATG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSLGII*ANETTM
Trigger: CATTGTGGTTTCATTCGCTCAAATTATCCCTAAAGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATTTGGTTTCGGGATATaGAGGCCAGGACTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEFGFGI*RPGLVE
Trigger: TTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCTGAACCATTTGGAATaGGACCTCAAGTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTLNHLE*DLKSVK
Trigger: TTTCACTGACTTGAGGTCTCATTCCAAATGGTTCAG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCAAATCTGAGACCGATTaGTATAAAGCAAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFKSETD*YKASGH
Trigger: ATGACCACTTGCTTTATAGCAATCGGTCTCAGATTT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCAAATCTGAGACCGATTaGTATAAAGCAAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPKSETD*YKASGH
Trigger: ATGACCACTTGCTTTATAGCAATCGGTCTCAGATTT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACGGGCGGAGCTTACATaGTATTTCTGCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQERAELT*YFCIMQ
Trigger: CTGCATGATGCAGAAATAGCATGTAAGCTCCGCCCG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGGCATTTTCCAGTCTTaGTGGAAGCAGCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKGIFQS*WKQLLE
Trigger: CTCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCGTGCCTGTCTCAATaGATCTACGAATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSCLSQ*IYESSG
Trigger: GCCTGATGATTCGTAGATGCATTGAGACAGGCACGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGCTCTTAAACACCTCTaGTGTTTATGTAGTTATGCA +
Preference number: 4 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFALKHL*CLCSYA
Trigger: TGCATAACTACATAAACAGCAGAGGTGTTTAAGAGC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGTGCCTCCTCCACCTTaGCTAGGGTGGCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKVPPPP*LGWLRL
Trigger: AAGCCTTAGCCACCCTAGGCAAGGTGGAGGAGGCAC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATCCGTACTGACTCCATaGGAAGAGGGACACGGGAGG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKSVLTP*EEGHGR
Trigger: CCTCCCGTGTCCCTCTTCCCATGGAGTCAGTACGGA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAGTTTACAAAAGGTGTaGCCACACGACAAGGACACG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSLQKV*PHDKDT
Trigger: CGTGTCCTTGTCGTGTGGCCACACCTTTTGTAAACT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCTTCAGTTCTTCTaGAAGGAATTTAGCTATGAG +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPFLQFF*KEFSYE
Trigger: CTCATAGCTAAATTCCTTCCAGAAGAACTGAAGGAA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCAAATTATGTTTTTCTaGGCTCTTAAACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPQIMFF*ALKHLC
Trigger: GCAGAGGTGTTTAAGAGCCCAGAAAAACATAATTTG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACTGTTCGATCCGTACTaGCTCCATGGGAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKLFDPY*LHGKRD
Trigger: GTCCCTCTTCCCATGGAGTCAGTACGGATCGAACAG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGCCCGCAAGGTGTTGTaGCTGGCTCATAGAATAATC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINARKVL*LAHRII
Trigger: GATTATTCTATGAGCCAGTCACAACACCTTGCGGGC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGACACTTTGCGTTGTaGTCTAGGCATCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEGHFAL*SRHLSR
Trigger: CCTAGAAAGATGCCTAGATCACAACGCAAAGTGTCC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGATAATTTGAGCGAATaGAACCACAATGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTDNLSE*NHNDAC
Trigger: GCAAGCATCATTGTGGTTTCATTCGCTCAAATTATC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATTCTTTAGGGATAATTTaGGCGAATGAAACCACAATG +
Preference number: 4 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNSLGII*ANETTM
Trigger: CATTGTGGTTTCATTCGCTCAAATTATCCCTAAAGA...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTGGGACCAAAGTGATTaGGTATCCGATTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKWDQSD*VSDSLG
Trigger: CCCTAAAGAATCGGATACTCAATCACTTTGGTCCCA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGGCATGGGACCAAAGTaGTTGAGTATCCGATTCTTT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKGMGPK*LSIRFF
Trigger: AAAGAATCGGATACTCAATCACTTTGGTCCCATGCC...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAGCTGTTGCAAGCTTaGGTGGAGATTAAACACGTG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEELLQA*VEIKHV
Trigger: CACGTGTTTAATCTCCACTCAAGCTTGCAACAGCTC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR GCA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTTTAAGCAAAAAGTATaGCCGCAAGGTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: STQFLSVINSRLMPLFDTFKQKV*PQGVVT
Trigger: AGTCACAACACCTTGCGGGCATACTTTTTGCTTAAA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATGCCAAACTGTCTCGTaGCTGTCTCAATGCATCTAC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQECQTVS*LSQCIY
Trigger: GTAGATGCATTGAGACAGGCACGAGACAGTTTGGCA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAAGCAAGTGGTCATTTaGAGCCAACTTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKKQVVI*SQLNCL
Trigger: GAGGCAGTTAAGTTGGCTCCAAATGACCACTTGCTT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCTGACTAGAACAATGTaGGAGCTCCAGATTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKLTRTM*ELQIVL
Trigger: AAGGACAATCTGGAGCTCCCACATTGTTCTAGTCAG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000439603.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATTTTCCAGTCTTGCTaGAAGCAGCTTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKIFQSC*KQLLER
Trigger: CCTCTCCAAAAGCTGCTTCCAGCAAGACTGGAAAAT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCCAGATTGTCTCTTTaGGCTTCACATCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSRLSL*ASHLAL
Trigger: GAGAGCAAGATGTGAAGCCCAAAGAGACAATCTGGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCATGAGACTCCAAGGTaGAATAAATCTGAGACCGAT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKHETPR*NKSETD
Trigger: ATCGGTCTCAGATTTATTTCACCTTGGAGTCTCATG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATGCAGCCATATTCTaGAAACCCTTTGACAGGATC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEDAAIF*KPFDRI
Trigger: GATCCTGTCAAAGGGTTTGCAGAATATGGCTGCATC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGGCTTTTCTGAAATGTaGCTTAAAACCCATCGGGCG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINGFSEM*LKTHRA
Trigger: CGCCCGATGGGTTTTAAGGCACATTTCAGAAAAGCC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAAGCAAGTGGTCATTTaGAGCCAACTTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEKQVVI*SQLNCL
Trigger: GAGGCAGTTAAGTTGGCTCCAAATGACCACTTGCTT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAACCGTCTTTGCACAATaGACACTTTGCGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQETVFAQ*TLCVVI
Trigger: GATCACAACGCAAAGTGTCCATTGTGCAAAGACGGT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACATGAGACTCCAAGGTaGAATAAATCTGAGACCGAT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEHETPR*NKSETD
Trigger: ATCGGTCTCAGATTTATTTCACCTTGGAGTCTCATG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGCTGATGCCTCTGTTTaGCACCCCCTTCTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKADASV*HPLLLR
Trigger: TCTTAACAGAAGGGGGTGTCAAACAGAGGCATCAGC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACGGGCGGAGCTTACATaGTATTTCTGCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKRAELT*YFCIMQ
Trigger: CTGCATGATGCAGAAATAGCATGTAAGCTCCGCCCG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTTTAAGCAAAAAGTATaGCCGCAAGGTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKFKQKV*PQGVVT
Trigger: AGTCACAACACCTTGCGGGCATACTTTTTGCTTAAA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGCTGGAAGCAGCTTTTaGAGAGGTAGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKAGSSF*RGSIPL
Trigger: AAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCTAAGGAGAAGTCTTTaGGCTTCACATCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINLRRSL*ASHLAL
Trigger: GAGAGCAAGATGTGAAGCCCAAAGACTTCTCCTTAG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTCTGATAGAAACCCATaGCATTTCCGGCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINSDRNP*HFRHLK
Trigger: CTTTAAGTGCCGGAAATGTCATGGGTTTCTATCAGA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCATGAGACTCCAAGGTaGAATAAATCTGAGACCGAT +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINHETPR*NKSETD
Trigger: ATCGGTCTCAGATTTATTTCACCTTGGAGTCTCATG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGGACACTTTGCGTTGTaGTCTAGGCATCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKGHFAL*SRHLSR
Trigger: CCTAGAAAGATGCCTAGATCACAACGCAAAGTGTCC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAATTCTGCAAACCCTTTaGCAGGATCTCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKILQTL*QDLQGT
Trigger: TGTGCCTTGGAGATCCTGTCAAAGGGTTTGCAGAAT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQERIEHF*SLGCSH
Trigger: ATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACCATCAGCAAAGAATTaGACATTTCTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEPSAKN*TFLISR
Trigger: CCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCTTTAGGGATAATTTaGGCGAATGAAACCACAATG +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSLGII*ANETTM
Trigger: CATTGTGGTTTCATTCGCTCAAATTATCCCTAAAGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACTTACATGCTATTTCTaGATCATGCAGTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQELTCYF*IMQCIL
Trigger: GAGAATGCACTGCATGATGCAGAAATAGCATGTAAG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATCAGTGGGAGGATCTTaGTTGGAGGCTTTATTAGGC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKSVGGS*LEALLG
Trigger: GCCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATCGTGCCTGTCTCAATaGATCTACGAATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKSCLSQ*IYESSG
Trigger: GCCTGATGATTCGTAGATGCATTGAGACAGGCACGA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAAGTTTACAAAAGGTGTaGCCACACGACAAGGACACG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKSLQKV*PHDKDT
Trigger: CGTGTCCTTGTCGTGTGGCCACACCTTTTGTAAACT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CCA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCAAATTATGTTTTTCTaGGCTCTTAAACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKQIMFF*ALKHLC
Trigger: GCAGAGGTGTTTAAGAGCCCAGAAAAACATAATTTG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINPSAKN*TFLISR
Trigger: CCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATGGGACCAAAGTGATTaGGTATCCGATTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKWDQSD*VSDSLG
Trigger: CCCTAAAGAATCGGATACTCAATCACTTTGGTCCCA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGGCATGGGACCAAAGTaGTTGAGTATCCGATTCTTT +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKGMGPK*LSIRFF
Trigger: AAAGAATCGGATACTCAATCACTTTGGTCCCATGCC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAAATCTGAGACCGATTaGTATAAAGCAAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FWALKHLCCLCSYAACQEKSETD*YKASGH
Trigger: ATGACCACTTGCTTTATAGCAATCGGTCTCAGATTT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR GCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTTTAAGCAAAAAGTATaGCCGCAAGGTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINFKQKV*PQGVVT
Trigger: AGTCACAACACCTTGCGGGCATACTTTTTGCTTAAA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGATGCAGCCATATTCTaGAAACCCTTTGACAGGATC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKDAAIF*KPFDRI
Trigger: GATCCTGTCAAAGGGTTTGCAGAATATGGCTGCATC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAAAGCAAGTGGTCATTTaGAGCCAACTTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKKQVVI*SQLNCL
Trigger: GAGGCAGTTAAGTTGGCTCCAAATGACCACTTGCTT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAATTTTCCAGTCTTGCTaGAAGCAGCTTTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKIFQSC*KQLLER
Trigger: CCTCTCCAAAAGCTGCTTCCAGCAAGACTGGAAAAT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAACCGTCTTTGCACAATaGACACTTTGCGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKTVFAQ*TLCVVI
Trigger: GATCACAACGCAAAGTGTCCATTGTGCAAAGACGGT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAAAGCAAGTGGTCATTTaGAGCTGTTGCAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKKQVVI*SCCKLE
Trigger: CTCAAGCTTGCAACAGCTCCAAATGACCACTTGCTT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAACCTTGGTAGATTATaGCTGGTAACTTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINNLGRL*LVTSVV
Trigger: GACTACTGAAGTTACCAGCCATAATCTACCAAGGTT...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACGAATGAAACCACAATaGTGCTTGCTGATAGACACA +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKRMKPQ*CLLIDT
Trigger: TGTGTCTATCAGCAAGCATCATTGTGGTTTCATTCG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTCTTTAGGGATAATTTaGGCGAATGAAACCACAATG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINSLGII*ANETTM
Trigger: CATTGTGGTTTCATTCGCTCAAATTATCCCTAAAGA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTTCCTTCAGTTCTTCTaGAAGGAATTTAGCTATGAG +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINFLQFF*KEFSYE
Trigger: CTCATAGCTAAATTCCTTCCAGAAGAACTGAAGGAA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCAAATTATGTTTTTCTaGGCTCTTAAACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINQIMFF*ALKHLC
Trigger: GCAGAGGTGTTTAAGAGCCCAGAAAAACATAATTTG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKRIEHF*SLGCSH
Trigger: ATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR TCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAGATAATTTGAGCGAATaGAACCACAATGATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKDNLSE*NHNDAC
Trigger: GCAAGCATCATTGTGGTTTCATTCGCTCAAATTATC...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR GCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAAAATCTGAGACCGATTaGTATAAAGCAAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKKSETD*YKASGH
Trigger: ATGACCACTTGCTTTATAGCAATCGGTCTCAGATTT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CCA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATTCCTTCAGTTCTTCTaGAAGGAATTTAGCTATGAG +
Preference number: 4 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKFLQFF*KEFSYE
Trigger: CTCATAGCTAAATTCCTTCCAGAAGAACTGAAGGAA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS GCA 90 bp CCGCGGCGGCCCCCGTCTCTTCCGCCGCCACGGTGCCGCTTGCAGTaGTACCCTCGTCCGGGGGCGCCGGCGCCAGCGCCTCGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: PRRPPSLPPPRCRLQ*YPRPGAPAPAPRLA
Trigger: CGCAAGGCGAGGCGCTGGCGCCGGCGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAGAGACGGGGGCCGCCGCGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 90 bp GGGCTCCACGCGCCCGCCCAGTGGCCACCATCAAGGCGGAGAGCTTaGCCCCGCACAGCGCACAGCGCCGGTCGGCGGCCCGCCCACGTT +
Preference number: 5 (lower is better)
Translates to: GLHAPAQWPPSRRRA*PRTAHSAGRRPAHV
Trigger: AACGTGGGCGGGCCGCCGACCGGCGCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGATGGTGGCCACTGGGCGGGCGCGTGGAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 90 bp GCAGTGCTACCCTCGTCCGGGGGCGCCGGCGCCAGCGCCTCGCCTTaGGGGACTTTCTCCGCCAGGCAGCGCACCAGCTGCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AVLPSSGGAGASASP*GTFSARQRTSCSSC
Trigger: GCAGCTGGAGCAGCTGGTGCGCTGCCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGCGCCGGCGCCCCCGGACGAGGGTAGCACTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 90 bp TCCCCGGCATGCTTCGCCAGACACCGCGCCCCACGGCCGAGCTCCTaGCAAACTGCCAGAGCTGGGCAACACCGGCTGGCGGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SPACFARHRAPRPSS*QTARAGQHRLAAQQ
Trigger: CTGCTGAGCCGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTGGGGCGCGGTGTCTGGCGAAGCATGCCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS CCA 90 bp CAGACACCGCGCCCCACGGCCGAGCTCCTGGCAAACTGCCAGAGCTaGGCAACACCGGCTGGCGGCTCAGCAGCCACTTCCTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QTPRPTAELLANCQS*ATPAGGSAATSWVQ
Trigger: CTGGACCCAGGAAGTGGCTGCTGAGCCGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTGGGGCGCGGTGTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS GCA 90 bp ATGCTTCGCCAGACACCGCGCCCCACGGCCGAGCTCCTGGCAAACTaGCAGAGCTGGGCAACACCGGCTGGCGGCTCAGCAGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: MLRQTPRPTAELLAN*QSWATPAGGSAATS
Trigger: GGAAGTGGCTGCTGAGCCGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTGGGGCGCGGTGTCTGGCGAAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS CCA 90 bp CACGGCCGAGCTCCTGGCAAACTGCCAGAGCTGGGCAACACCGGCTaGCGGCTCAGCAGCCACTTCCTGGGTCCAGGCGTGGTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: HGRAPGKLPELGNTG*RLSSHFLGPGVVGQ
Trigger: CTGACCCACCACGCCTGGACCCAGGAAGTGGCTGCTGAGCCGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS TCA 90 bp GGGCTTCACGGATTCGCCCCCGGGACGCCAAGGCGTCTGCCTGCGTaGGCAGGACTTTGCTCTCCGGCGTTGAGGTCCCCGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: GLHGFAPGTPRRLPA*AGLCSPALRSPETA
Trigger: AGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCCCGGGGGCGAATCCGTGAAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 90 bp AGCAGGACTTTGCTCTCCGGCGTTGAGGTCCCCGGAGACTGCTCTTaGTCTGGCTCCCGCGTCGGTAGAGGTGCGGGGCCCTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SRTLLSGVEVPGDCS*SGSRVGRGAGPSAA
Trigger: GGCTGCAGAGGGCCCCGCACCTCTACCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 90 bp TCGAGGGCTTCACGGATTCGCCCCCGGGACGCCAAGGCGTCTGCCTaGGTGAGCAGGACTTTGCTCTCCGGCGTTGAGGTCCCCGGAGAC +
Preference number: 5 (lower is better)
Translates to: SRASRIRPRDAKASA*VSRTLLSGVEVPGD
Trigger: GTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCCCGGGGGCGAATCCGTGAAGCCCTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 90 bp GACGAGGCGTCTAGGGACCGGGGACACGAAGCAAGGAGTGGCAGCTaGAGGAAATCGGGGCAGCCACCGCCGCCATGCCACCGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: DEASRDRGHEARSGS*RKSGQPPPPCHRAP
Trigger: AGGAGCTCGGTGGCATGGCGGCGGTGGCTGCCCCGATTTCCTCCAGCTGCCACTCCTTGCTTCGTGTCCCCGGTCCCTAGACGCCTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 90 bp TGCGTGAGCAGGACTTTGCTCTCCGGCGTTGAGGTCCCCGGAGACTaGTCTTGCTCTGGCTCCCGCGTCGGTAGAGGTGCGGGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: CVSRTLLSGVEVPGD*SCSGSRVGRGAGPS
Trigger: AGAGGGCCCCGCACCTCTACCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 90 bp CAGTCGGTTGCCCTCGTGCCGGAGTTGCGACGCTCGCGCTGGGCCTaGAAACAACTTGCCGAGGAGGCCGCTGAGCACCACGTTGACTCG +
Preference number: 5 (lower is better)
Translates to: QSVALVPELRRSRWA*KQLAEEAAEHHVDS
Trigger: CGAGTCAACGTGGTGCTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS TCA 90 bp CTCTGCAGCCACCTTTGGGTGGGGGCCCATGTCTACTTGGGCCGCTaGTGCCCCTCGCTCCGCCGACTCCAAGTTGTCGCTGCTGACCTC +
Preference number: 5 (lower is better)
Translates to: LCSHLWVGAHVYLGR*CPSLRRLQVVAADL
Trigger: GAGGTCAGCAGCGACAACTTGGAGTCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGACATGGGCCCCCACCCAAAGGTGGCTGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 90 bp GGGCCGCTGATGCCCCTCGCTCCGCCGACTCCAAGTTGTCGCTGCTaGCCTCAGCGGGCAAGCTCAGCATCTGTTCGATCCGTACTGACT +
Preference number: 5 (lower is better)
Translates to: GPLMPLAPPTPSCRC*PQRASSASVRSVLT
Trigger: AGTCAGTACGGATCGAACAGATGCTGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGAGCGAGGGGCATCAGCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 90 bp TCCAGGCGTGGTGGGTCAGAGAGCGGCTCCCTGGGGAAATTCGGGTaGCCTAGTCTAGCTGGAGATGGGGGACTGCCCACGTTACCCTTG +
Preference number: 5 (lower is better)
Translates to: SRRGGSESGSLGKFG*PSLAGDGGLPTLPL
Trigger: CAAGGGTAACGTGGGCAGTCCCCCATCTCCAGCTAGACTAGGGCACCCGAATTTCCCCAGGGAGCCGCTCTCTGACCCACCACGCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS-3UTR CAA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTGCCCTCGTGCCGGAGTaGCGACGCTCGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFALVPE*RRSRWA
Trigger: GGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGC...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACATCAAGGCGGAGAGCTaGACCCCGCACAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHIKAES*TPHSAQ
Trigger: CTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGAT...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS TCA 90 bp GCTGCTGACCTCAGCGGGCAAGCTCAGCATCTGTTCGATCCGTACTaGCTCCATGGGAAGAGGGACACGGGAGGAGACGAGGCGTCTAGG +
Preference number: 5 (lower is better)
Translates to: AADLSGQAQHLFDPY*LHGKRDTGGDEASR
Trigger: CCTAGACGCCTCGTCTCCTCCCGTGTCCCTCTTCCCATGGAGTCAGTACGGATCGAACAGATGCTGAGCTTGCCCGCTGAGGTCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTCGCCAGCGCCTCGCCTaGCGGGACTTTCTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFRQRLA*RDFLRQ
Trigger: CTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGCG...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACACCGCTGAGCACCACGTaGACTCGCAGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SLLGRGAELGFPREELLTPLSTT*TRSGGG
Trigger: GCCGCCGCCGCTGCGAGTCAACGTGGTGCTCAGCGG...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCGGGCCTGGAAACAACTaGCCGAGGAGGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GRGAELGFPREELLTSTSGPGNN*PRRPLS
Trigger: GCTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCC...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGCCCTCGTGCCGGAGTaGCGACGCTCGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFALVPE*RRSRWA
Trigger: GGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCGCTGAGCACCACGTaGACTCGCAGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPLSTT*TRSGGG
Trigger: GCCGCCGCCGCTGCGAGTCAACGTGGTGCTCAGCGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS TCA 90 bp AAGGTGTGGCCACACGACAAGGACACGGGGTCTGATAGAAACCCATaGCATTTCCGGCACTTAAAGCCGTCCCACACCTCGGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: KVWPHDKDTGSDRNP*HFRHLKPSHTSVAA
Trigger: GGCGGCCACCGAGGTGTGGGACGGCTTTAAGTGCCGGAAATGTCATGGGTTTCTATCAGACCCCGTGTCCTTGTCGTGTGGCCACACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCCGCCACGGTGCCGCTaGCAGTGCTACCCTCGTCCG +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFPPRCR*QCYPRP
Trigger: CGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCGG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGCCCTCGTGCCGGAGTaGCGACGCTCGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTALVPE*RRSRWA
Trigger: GGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGGGATCCCCAAGCAGTaGCCGCGCCGGCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTGIPKQ*PRRPPA
Trigger: GGCGGGAGGCCGGCGCGGCAACTGCTTGGGGATCCC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CAA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCGCCGACTCCAAGTaGTCGCTGCTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFSADSK*SLLTSA
Trigger: CGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCGCTGAGCACCACGTaGACTCGCAGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTPLSTT*TRSGGG
Trigger: GCCGCCGCCGCTGCGAGTCAACGTGGTGCTCAGCGG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CCGCTGGCTCTGATGGAGCACCCTGAAGCGCCTCTTGCCTATGCTGTCAACCACAACTTAACTGCCTCGTaGTACTTGAGCAGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: PLALMEHPEAPLAYAVNHNLTAS*YLSSAA
Trigger: GGCGGCACTGCTCAAGTACAACGAGGCAGTTAAGTT...GTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGTGCTCCATCAGAGCCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCGGAGACTGCTCTaGCTCTGGCTCCCGCGTCGG +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTPRRLL*LWLPRR
Trigger: CCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGGG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TCATTGCTAGGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACACTTTGCTCTCCGGCGTaGAGGTCCCCGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: SLLGRGAELGFPREELLTLCSPA*RSPETA
Trigger: AGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAG...TGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTGCGTGAGCAGGACTTaGCTCTCCGGCGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFCVSRT*LSGVEV
Trigger: GACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCA...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCGGGCCTGGAAACAACTaGCCGAGGAGGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFGPGNN*PRRPLS
Trigger: GCTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCC...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTACTGCCTCGTTGTACTaGAGCAGTGCCGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFTASLY*SSAAST
Trigger: GGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAGT...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS CCA 90 bp GTGGTCATTTGGAGCTGTTGCAAGCTTGAGTGGAGATTAAACACGTaGAGACTCCGGCCCACACCCCTCCTCCACTCCACAGAGTCAGGT +
Preference number: 5 (lower is better)
Translates to: VVIWSCCKLEWRLNT*RLRPTPLLHSTESG
Trigger: ACCTGACTCTGTGGAGTGGAGGAGGGGTGTGGGCCGGAGTCTCCACGTGTTTAATCTCCACTCAAGCTTGCAACAGCTCCAAATGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTCCGCCGACTCCAAGTaGTCGCTGCTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPSADSK*SLLTSA
Trigger: CGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCTTTGCTCTCCGGCGTaGAGGTCCCCGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFLCSPA*RSPETA
Trigger: AGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCATCAAGGCGGAGAGCTaGACCCCGCACAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPIKAES*TPHSAQ
Trigger: CTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGAT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCCTCGTGCCGGAGTaGCGACGCTCGCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEALVPE*RRSRWA
Trigger: GGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGCACAGGCTACGGGTaGGCGGGGCGGGCAAGGGGG +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEGTGYG*AGRARG
Trigger: CCCCCTTGCCCGCCCCGCCAACCCGTAGCCTGTGCC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCCCGGAGACTGCTCTaGCTCTGGCTCCCGCGTCGG +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKPRRLL*LWLPRR
Trigger: CCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGGG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGCGTGAGCAGGACTTaGCTCTCCGGCGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCVSRT*LSGVEV
Trigger: GACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGCGTGAGCAGGACTTaGCTCTCCGGCGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCVSRT*LSGVEV
Trigger: GACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGGGCCTGGAAACAACTaGCCGAGGAGGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTGPGNN*PRRPLS
Trigger: GCTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTCGCGGTACAGTCGGTaGCCCTCGTGCCGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTSRYSR*PSCRSC
Trigger: GCAACTCCGGCACGAGGGCAACCGACTGTACCGCGA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCACTGCCTCGTTGTACTaGAGCAGTGCCGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPTASLY*SSAAST
Trigger: GGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAGT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CATTCAGTCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGGAGCTGAGCTCGGCACCCTGAAGCGCCTCTaGCCTATGCTGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: HSVCPLRTSLLGRGAELGTLKRL*PMLSTT
Trigger: AGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGT...GCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGACTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCAGTGCCTCCTCCACCTaGCCTAGGGTGGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFSASST*PRVAKA
Trigger: AGCCTTAGCCACCCTAGGCAAGGTGGAGGAGGCACT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS CCA 90 bp GCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCTaGGTTACAGCTTCAATTACACAACAGGCAGTGCCCTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: APCCGSRDFCLFSCP*VTASITQQAVPFDR
Trigger: CCTGTCAAAGGGCACTGCCTGTTGTGTAATTGAAGCTGTAACCCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472173.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACGCCAGCGCCTCGCCTaGCGGGACTTTCTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQERQRLA*RDFLRQ
Trigger: CTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGCG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACCGCCACGGTGCCGCTaGCAGTGCTACCCTCGTCCG +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEPPRCR*QCYPRP
Trigger: CGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCGG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCCGCTGAGCACCACGTaGACTCGCAGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINPLSTT*TRSGGG
Trigger: GCCGCCGCCGCTGCGAGTCAACGTGGTGCTCAGCGG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CAA 90 bp GGAAGGGGAGCTGAGCTCGGCTTTCCAAGGGAAGAACTGCTAACATCCACCAGCATCAGTGGGAGGATCTaGCTTGGAGGCTTTATTAGG +
Preference number: 5 (lower is better)
Translates to: GRGAELGFPREELLTSTSISGRI*LGGFIR
Trigger: CCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGAT...GCTGGTGGATGTTAGCAGTTCTTCCCTTGGAAAGCCGAGCTCAGCTCCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS TCA 90 bp GAGCGCATTCAAGGTCAGATGCGTCGAAAGATGCAAGTGGTAAACTaGGAGCAGGTTTGTCCCCCTGATCAGTGGGAGGATCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: ERIQGQMRRKMQVVN*EQVCPPDQWEDLAW
Trigger: CCAAGCAAGATCCTCCCACTGATCAGGGGGACAAACCTGCTCTCAGTTTACCACTTGCATCTTTCGACGCATCTGACCTTGAATGCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000472173.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCGCGGTACAGTCGGTaGCCCTCGTGCCGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSRYSR*PSCRSC
Trigger: GCAACTCCGGCACGAGGGCAACCGACTGTACCGCGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCACCCTGAAGCGCCTCTaGCCTATGCTGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPTLKRL*PMLSTT
Trigger: AGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCACCCTGAAGCGCCTCTaGCCTATGCTGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFTLKRL*PMLSTT
Trigger: AGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS GCA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTaGCTATTTTCCTGTCCCTGGGTTACAGCTTCAATTACACAACAG +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDF*LFSCPWVTASITQQ
Trigger: CTGTTGTGTAATTGAAGCTGTAACCCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472173.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGGGCCTGGAAACAACTaGCCGAGGAGGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEGPGNN*PRRPLS
Trigger: GCTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGTGGGAGCTCCAGATaGTCCTTAAAACCCATCGGG +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCGSSR*SLKPIG
Trigger: CCCGATGGGTTTTAAGGACAATCTGGAGCTCCCACA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000439603.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCCCTTTAAGGACCTCATaGCTAGGAAGGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPPLRTS*LGRGAE
Trigger: CTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGG...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCCCTTTAAGGACCTCATaGCTAGGAAGGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFPLRTS*LGRGAE
Trigger: CTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGG...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CACCCAGCCATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTGCCTATTTCTCCAGATTGTCTCTTaGGGCTTCACATCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: HPAISVAPCCGSRDFCLFLQIVS*GFTSCS
Trigger: AGAGCAAGATGTGAAGCCCAAAGAGACAATCTGGAG...AAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAATGGCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGACTGCCTCGTTGTACTaGAGCAGTGCCGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKTASLY*SSAAST
Trigger: GGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAGT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATCCTTTAAGGACCTCATaGCTAGGAAGGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNPLRTS*LGRGAE
Trigger: CTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGG...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAGTGCCTCCTCCACCTaGCCTAGGGTGGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSASST*PRVAKA
Trigger: AGCCTTAGCCACCCTAGGCAAGGTGGAGGAGGCACT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCCAGGTTAAAGGGGTaGGAGGCGAGGGCACAGGCT +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEARLKG*EARAQA
Trigger: AGCCTGTGCCCTCGCCTCCAACCCCTTTAACCTGGC...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCAACTTAACTGCCTCGTaGTACTTGAGCAGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTNLTAS*YLSSAA
Trigger: GGCGGCACTGCTCAAGTACAACGAGGCAGTTAAGTT...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCGTGGGAGGATCTTGCTaGGAGGCTTTATTAGGCATC +
Preference number: 5 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTVGGSC*EALLGI
Trigger: GATGCCTAATAAAGCCTCCAAGCAAGATCCTCCCAC...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCATCAGTGGGAGGATCTaGCTTGGAGGCTTTATTAGG +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPISGRI*LGGFIR
Trigger: CCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGAT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCATCAGTGGGAGGATCTaGCTTGGAGGCTTTATTAGG +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFISGRI*LGGFIR
Trigger: CCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGAT...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTGCACAATGGACACTTaGCGTTGTGATCTAGGCATC +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPCTMDT*RCDLGI
Trigger: GATGCCTAGATCACAACGCAAAGTGTCCATTGTGCA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGTGAAAGACCGTCTTaGCACAATGGACACTTTGCG +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCERPS*HNGHFA
Trigger: CGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCACA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTATTCTGCAAACCCTTaGACAGGATCTCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPYSANP*TGSPRH
Trigger: GTGCCTTGGAGATCCTGTCAAAGGGTTTGCAGAATA...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR CAA 90 bp GCAATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATCATCCCCGTTTCTTCTaGGGATTCAATCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: AIHSLVLVSGYEGQDSSNHPRFF*GFNLAM
Trigger: CATTGCCAGATTGAATCCCAAGAAGAAACGGGGATG...ATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCGTGGGAGGATCTTGCTaGGAGGCTTTATTAGGCATC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTVGGSC*EALLGI
Trigger: GATGCCTAATAAAGCCTCCAAGCAAGATCCTCCCAC...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCTGCACAATGGACACTTaGCGTTGTGATCTAGGCATC +
Preference number: 5 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTCTMDT*RCDLGI
Trigger: GATGCCTAGATCACAACGCAAAGTGTCCATTGTGCA...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp ACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCATCCACTCACTAGTTTaGGTTTCGGGATATGAAGGC +
Preference number: 5 (lower is better)
Translates to: TQFLSVINSRLMPLFDTPIHSLV*VSGYEG
Trigger: GCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT...GGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ATCCACTCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCCGAGAGACTAGATCCTaGATGAGTTCTGTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: IHSLVLVSGYEGQDSSNTRETRS*MSSVSL
Trigger: CAGGGAAACAGAACTCATCAAGGATCTAGTCTCTCG...GGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS TCA 90 bp CTCTTGCCTATGCTGTCAACCACTGAGCGGCCATCAGCAAAGAATTaGACATTTCTGATCTCTAGGATGCAGCCATATTCTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: LLPMLSTTERPSAKN*TFLISRMQPYSANP
Trigger: AGGGTTTGCAGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGGTTGACAGCATAGGCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATCCGCCGACTCCAAGTaGTCGCTGCTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKSADSK*SLLTSA
Trigger: CGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACTTTGCTCTCCGGCGTaGAGGTCCCCGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKLCSPA*RSPETA
Trigger: AGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAATCAAGGCGGAGAGCTaGACCCCGCACAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKIKAES*TPHSAQ
Trigger: CTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGAT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGAACTTAACTGCCTCGTaGTACTTGAGCAGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKNLTAS*YLSSAA
Trigger: GGCGGCACTGCTCAAGTACAACGAGGCAGTTAAGTT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTGTGGGAGCTCCAGATaGTCCTTAAAACCCATCGGG +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKCGSSR*SLKPIG
Trigger: CCCGATGGGTTTTAAGGACAATCTGGAGCTCCCACA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000439603.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTGGCATTTTCCAGTCTaGCTGGAAGCAGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTWHFPV*LEAAFG
Trigger: TCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCCA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCATCCCCGTTTCTTCTaGGGATTCAATCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTHPRFF*GFNLAM
Trigger: CATTGCCAGATTGAATCCCAAGAAGAAACGGGGATG...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTGCACAATGGACACTTaGCGTTGTGATCTAGGCATC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTCTMDT*RCDLGI
Trigger: GATGCCTAGATCACAACGCAAAGTGTCCATTGTGCA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTGTGAAAGACCGTCTTaGCACAATGGACACTTTGCG +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTCERPS*HNGHFA
Trigger: CGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCACA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGTGTGAAAGACCGTCTTaGCACAATGGACACTTTGCG +
Preference number: 5 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQCERPS*HNGHFA
Trigger: CGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCACA...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTGCACACTTCTAGTATaGTTATTTCCCCCTAGGTAC +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFCTLLV*LFPPRY
Trigger: GTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp CAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCCCCTTCTCACATCTTGCTCTCTaGTTCTTTCCATCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: QFLSVINSRLMPLFDTPFSHLAL*FFPSRD
Trigger: ATCCCTTGATGGAAAGAACAAGAGAGCAAGATGTGA...GAAGGGGGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAACAGGCAGTGCCCTTaGACAGGATCTCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQENRQCP*TGSPRH
Trigger: GTGCCTTGGAGATCCTGTCAAAGGGCACTGCCTGTT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAACTGCCTCGTTGTACTaGAGCAGTGCCGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKTASLY*SSAAST
Trigger: GGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAGT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304778.11
ENST00000371628.8
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAAACTTAACTGCCTCGTaGTACTTGAGCAGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQENLTAS*YLSSAA
Trigger: GGCGGCACTGCTCAAGTACAACGAGGCAGTTAAGTT...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATACCCTGAAGCGCCTCTaGCCTATGCTGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINTLKRL*PMLSTT
Trigger: AGTGGTTGACAGCATAGGCAAGAGGCGCTTCAGGGT...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TCACTAGTTTTGGTTTCGGGATATGAAGGCCAGGACTCGTCGAATACCATTCAGATCCACTCACTAGTTTaGGTTTCGGGATATGAAGGC +
Preference number: 5 (lower is better)
Translates to: SLVLVSGYEGQDSSNTIQIHSLV*VSGYEG
Trigger: GCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT...CTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACCAAAACTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481285.5
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAAAGTGCCTCCTCCACCTaGCCTAGGGTGGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKSASST*PRVAKA
Trigger: AGCCTTAGCCACCCTAGGCAAGGTGGAGGAGGCACT...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACTGCCCACGTTACCCTaGAAGCTGCAAAGCCCACCC +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKLPTLP*KLQSPP
Trigger: GGGTGGGCTTTGCAGCTTCAAGGGTAACGTGGGCAG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTGTGGGAGCTCCAGATaGTCCTGTAACAACCTTGGT +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKCGSSR*SCNNLG
Trigger: ACCAAGGTTGTTACAGGACAATCTGGAGCTCCCACA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTGGCATTTTCCAGTCTaGCTGGAAGCAGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKWHFPV*LEAAFG
Trigger: TCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCCA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGCATCCCCGTTTCTTCTaGGGATTCAATCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKHPRFF*GFNLAM
Trigger: CATTGCCAGATTGAATCCCAAGAAGAAACGGGGATG...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTGTGAAAGACCGTCTTaGCACAATGGACACTTTGCG +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKCERPS*HNGHFA
Trigger: CGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCACA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATCCTTTAAGGACCTCATaGCTAGGAAGGGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINPLRTS*LGRGAE
Trigger: CTCAGCTCCCCTTCCTAGCAATGAGGTCCTTAAAGG...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TCTACTCAATTTCTCTCTGTGATCAACAGCAGGCTGATGCCTCTGTTTGACACCTGCACACTTCTAGTATaGTTATTTCCCCCTAGGTAC +
Preference number: 5 (lower is better)
Translates to: STQFLSVINSRLMPLFDTCTLLV*LFPPRY
Trigger: GTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA...GGTGTCAAACAGAGGCATCAGCCTGCTGTTGATCACAGAGAGAAATTGAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATGGCATTTTCCAGTCTaGCTGGAAGCAGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEWHFPV*LEAAFG
Trigger: TCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCCA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATGTGGGAGGATCTTGCTaGGAGGCTTTATTAGGCATC +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINVGGSC*EALLGI
Trigger: GATGCCTAATAAAGCCTCCAAGCAAGATCCTCCCAC...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATGTGAAAGACCGTCTTaGCACAATGGACACTTTGCG +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQECERPS*HNGHFA
Trigger: CGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCACA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAATATTCTGCAAACCCTTaGACAGGATCTCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQEYSANP*TGSPRH
Trigger: GTGCCTTGGAGATCCTGTCAAAGGGTTTGCAGAATA...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGATCCACTCACTAGTTTaGGTTTCGGGATATGAAGGC +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKIHSLV*VSGYEG
Trigger: GCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000481285.5
CDS-3UTR CAA 90 bp TTCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAACTCCAGATTGTCTCTTaGGGCTTCACATCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: FWALKHLCCLCSYAACQELQIVS*GFTSCS
Trigger: AGAGCAAGATGTGAAGCCCAAAGAGACAATCTGGAG...TTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000481285.5
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATATCAGTGGGAGGATCTaGCTTGGAGGCTTTATTAGG +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINISGRI*LGGFIR
Trigger: CCTAATAAAGCCTCCAAGCAAGATCCTCCCACTGAT...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTGCACAATGGACACTTaGCGTTGTGATCTAGGCATC +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINCTMDT*RCDLGI
Trigger: GATGCCTAGATCACAACGCAAAGTGTCCATTGTGCA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTATTCTGCAAACCCTTaGACAGGATCTCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINYSANP*TGSPRH
Trigger: GTGCCTTGGAGATCCTGTCAAAGGGTTTGCAGAATA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TCTGGGCTCTTAAACACCTCTGCTGTTTATGTAGTTATGCAGCATGTCAAGAAGTCACATCTTGCTCTCTaGTTCTTTCCATCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: SGLLNTSAVYVVMQHVKKSHLAL*FFPSRD
Trigger: ATCCCTTGATGGAAAGAACAAGAGAGCAAGATGTGA...CTTCTTGACATGCTGCATAACTACATAAACAGCAGAGGTGTTTAAGAGCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371628.8
ENST00000422289.3
ENST00000481285.5
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATATCCACTCACTAGTTTaGGTTTCGGGATATGAAGGC +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINIHSLV*VSGYEG
Trigger: GCCTTCATATCCCGAAACCAAAACTAGTGAGTGGAT...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATACTAAGGAGAAGTCTTaGGGCTTCACATCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINTKEKS*GFTSCS
Trigger: AGAGCAAGATGTGAAGCCCAAAGACTTCTCCTTAGT...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422289.3
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATGGCATTTTCCAGTCTaGCTGGAAGCAGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKWHFPV*LEAAFG
Trigger: TCCAAAAGCTGCTTCCAGCAAGACTGGAAAATGCCA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAACATCCCCGTTTCTTCTaGGGATTCAATCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKHPRFF*GFNLAM
Trigger: CATTGCCAGATTGAATCCCAAGAAGAAACGGGGATG...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATGCACAATGGACACTTaGCGTTGTGATCTAGGCATC +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKCTMDT*RCDLGI
Trigger: GATGCCTAGATCACAACGCAAAGTGTCCATTGTGCA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS-3UTR CAA 90 bp TGCACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATTCACATCTTGCTCTCTaGTTCTTTCCATCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: CTLLVLLFPPRYMVNHINSHLAL*FFPSRD
Trigger: ATCCCTTGATGGAAAGAACAAGAGAGCAAGATGTGA...ATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000422289.3
CDS CCA 90 bp TTCCATTTCCTCTTCATAAAGCTTCCTTCGTTCCTTCAGTTCTTCTaGAAGGAATTTAGCTATGAGCTCCTCCATTATTACATTTTTGCT +
Preference number: 5 (lower is better)
Translates to: FHFLFIKLPSFLQFF*KEFSYELLHYYIFA
Trigger: AGCAAAAATGTAATAATGGAGGAGCTCATAGCTAAATTCCTTCCAGAAGAACTGAAGGAACGAAGGAAGCTTTATGAAGAGGAAATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000472173.5
ENST00000481285.5
CDS-3UTR CAA 90 bp ACACTTCTAGTATTGTTATTTCCCCCTAGGTACATGGTAAACCACATCAATAAATGCACACTTCTAGTATaGTTATTTCCCCCTAGGTAC +
Preference number: 5 (lower is better)
Translates to: TLLVLLFPPRYMVNHINKCTLLV*LFPPRY
Trigger: GTACCTAGGGGGAAATAACAATACTAGAAGTGTGCA...TTTATTGATGTGGTTTACCATGTACCTAGGGGGAAATAACAATACTAGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
CDS GCA 72 bp GGCGGCCCCCGTCTCTTCCGCCGCCACGGTGCCGCTTaGAGTGCTACCCTCGTCCGGGGGCGCCGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: GGPRLFRRHGAA*SATLVRGRRRQ
Trigger: CTGGCGCCGGCGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAGAGACGGGGGCCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp CGGCGGCCCCCGTCTCTTCCGCCGCCACGGTGCCGCTaGCAGTGCTACCCTCGTCCGGGGGCGCCGGCGCCA +
Preference number: 6 (lower is better)
Translates to: RRPPSLPPPRCR*QCYPRPGAPAP
Trigger: TGGCGCCGGCGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAGAGACGGGGGCCGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 72 bp CCCTCGTCCGGGGGCGCCGGCGCCAGCGCCTCGCCTTaGGGGACTTTCTCCGCCAGGCAGCGCACCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PSSGGAGASASP*GTFSARQRTSC
Trigger: GCAGCTGGTGCGCTGCCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGCGCCGGCGCCCCCGGACGAGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 72 bp CCCCCGTCTCTTCCGCCGCCACGGTGCCGCTTGCAGTaGTACCCTCGTCCGGGGGCGCCGGCGCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: PPSLPPPRCRLQ*YPRPGAPAPAP
Trigger: AGGCGCTGGCGCCGGCGCCCCCGGACGAGGGTAGCACTGCAAGCGGCACCGTGGCGGCGGAAGAGACGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 90 bp CGGGCTCCACGCGCCCGCCCAGTGGCCACCATCAAGGCGGAGAGCTaGACCCCGCACAGCGCACAGCGCCGGTCGGCGGCCCGCCCACGT +
Preference number: 6 (lower is better)
Translates to: RAPRARPVATIKAES*TPHSAQRRSAARPR
Trigger: ACGTGGGCGGGCCGCCGACCGGCGCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGATGGTGGCCACTGGGCGGGCGCGTGGAGCCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp ATCGGGGCAGCCACCGCCGCCATGCCACCGAGCTCCTaGCCCTGCCGCGCCTCCGGGAGCTCCATGCCGGCC +
Preference number: 6 (lower is better)
Translates to: IGAATAAMPPSS*PCRASGSSMPA
Trigger: GGCCGGCATGGAGCTCCCGGAGGCGCGGCAGGGTCAGGAGCTCGGTGGCATGGCGGCGGTGGCTGCCCCGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp GCGCCCGCCCAGTGGCCACCATCAAGGCGGAGAGCTTaGCCCCGCACAGCGCACAGCGCCGGTCGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: APAQWPPSRRRA*PRTAHSAGRRP
Trigger: GGGCCGCCGACCGGCGCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGATGGTGGCCACTGGGCGGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp ACCCTCGTCCGGGGGCGCCGGCGCCAGCGCCTCGCCTaGCGGGACTTTCTCCGCCAGGCAGCGCACCAGCTG +
Preference number: 6 (lower is better)
Translates to: TLVRGRRRQRLA*RDFLRQAAHQL
Trigger: CAGCTGGTGCGCTGCCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGCGCCGGCGCCCCCGGACGAGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp CGCGCCCGCCCAGTGGCCACCATCAAGGCGGAGAGCTaGACCCCGCACAGCGCACAGCGCCGGTCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RARPVATIKAES*TPHSAQRRSAA
Trigger: GGCCGCCGACCGGCGCTGTGCGCTGTGCGGGGTCAAGCTCTCCGCCTTGATGGTGGCCACTGGGCGGGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp CGCCGGCCTCCCGCCGGGCTGGCCAGGTTAAAGGGGTaGGAGGCGAGGGCACAGGCTACGGGTTGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: RRPPAGLARLKG*EARAQATGWRG
Trigger: GCCCCGCCAACCCGTAGCCTGTGCCCTCGCCTCCAACCCCTTTAACCTGGCCAGCCCGGCGGGAGGCCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS CAA 90 bp CAGTTGCCGCGCCGGCCTCCCGCCGGGCTGGCCAGGTTAAAGGGGTaGGAGGCGAGGGCACAGGCTACGGGTTGGCGGGGCGGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: QLPRRPPAGLARLKG*EARAQATGWRGGQG
Trigger: CCCTTGCCCGCCCCGCCAACCCGTAGCCTGTGCCCTCGCCTCCAACCCCTTTAACCTGGCCAGCCCGGCGGGAGGCCGGCGCGGCAACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS GCA 72 bp GTGCCGCCTCCACCTGGCGCTCGCGGTACAGTCGGTTaGCCTCGTGCCGGAGTTGCGACGCTCGCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VPPPPGARGTVG*PRAGVATLALG
Trigger: GCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACTGTACCGCGAGCGCCAGGTGGAGGCGGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS CAA 72 bp GTAGCCAGCCCACGGTCCCCAGGGATCCCCAAGCAGTaGCCGCGCCGGCCTCCCGCCGGGCTGGCCAGGTTA +
Preference number: 6 (lower is better)
Translates to: VASPRSPGIPKQ*PRRPPAGLARL
Trigger: TAACCTGGCCAGCCCGGCGGGAGGCCGGCGCGGCAACTGCTTGGGGATCCCTGGGGACCGTGGGCTGGCTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS CAA 90 bp TGCAGTGCTACCCTCGTCCGGGGGCGCCGGCGCCAGCGCCTCGCCTaGCGGGACTTTCTCCGCCAGGCAGCGCACCAGCTGCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: CSATLVRGRRRQRLA*RDFLRQAAHQLLQL
Trigger: CAGCTGGAGCAGCTGGTGCGCTGCCTGGCGGAGAAAGTCCCGCAAGGCGAGGCGCTGGCGCCGGCGCCCCCGGACGAGGGTAGCACTGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 72 bp CGCCCCACGGCCGAGCTCCTGGCAAACTGCCAGAGCTaGGCAACACCGGCTGGCGGCTCAGCAGCCACTTCC +
Preference number: 6 (lower is better)
Translates to: RPTAELLANCQS*ATPAGGSAATS
Trigger: GGAAGTGGCTGCTGAGCCGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS CCA 72 bp TGCTTCGCCAGACACCGCGCCCCACGGCCGAGCTCCTaGCAAACTGCCAGAGCTGGGCAACACCGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CFARHRAPRPSS*QTARAGQHRLA
Trigger: CGCCAGCCGGTGTTGCCCAGCTCTGGCAGTTTGCCAGGAGCTCGGCCGTGGGGCGCGGTGTCTGGCGAAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS TCA 72 bp GGATTCGCCCCCGGGACGCCAAGGCGTCTGCCTGCGTaGGCAGGACTTTGCTCTCCGGCGTTGAGGTCCCCG +
Preference number: 6 (lower is better)
Translates to: GFAPGTPRRLPA*AGLCSPALRSP
Trigger: CGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCCCGGGGGCGAATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 72 bp TTGCTCTCCGGCGTTGAGGTCCCCGGAGACTGCTCTTaGTCTGGCTCCCGCGTCGGTAGAGGTGCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: LLSGVEVPGDCS*SGSRVGRGAGP
Trigger: GGGCCCCGCACCTCTACCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 72 bp GCCCTCGTGCCGGAGTTGCGACGCTCGCGCTGGGCCTaGAAACAACTTGCCGAGGAGGCCGCTGAGCACCAC +
Preference number: 6 (lower is better)
Translates to: ALVPELRRSRWA*KQLAEEAAEHH
Trigger: GTGGTGCTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS GCA 72 bp CGCTCGCGGTACAGTCGGTTGCCCTCGTGCCGGAGTTaGGACGCTCGCGCTGGGCCTGGAAACAACTTGCCG +
Preference number: 6 (lower is better)
Translates to: RSRYSRLPSCRS*DARAGPGNNLP
Trigger: CGGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACTGTACCGCGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS CCA 72 bp TCGGTTGCCCTCGTGCCGGAGTTGCGACGCTCGCGCTaGGCCTGGAAACAACTTGCCGAGGAGGCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: SVALVPELRRSR*AWKQLAEEAAE
Trigger: CTCAGCGGCCTCCTCGGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGCAACCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS CCA 72 bp GCTGGCGGCTCAGCAGCCACTTCCTGGGTCCAGGCGTaGTGGGTCAGAGAGCGGCTCCCTGGGGAAATTCGG +
Preference number: 6 (lower is better)
Translates to: AGGSAATSWVQA*WVRERLPGEIR
Trigger: CCGAATTTCCCCAGGGAGCCGCTCTCTGACCCACCACGCCTGGACCCAGGAAGTGGCTGCTGAGCCGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS CAA 72 bp GCGTCGGTAGAGGTGCGGGGCCCTCTGCAGCCACCTTaGGGTGGGGGCCCATGTCTACTTGGGCCGCTGATG +
Preference number: 6 (lower is better)
Translates to: ASVEVRGPLQPP*GGGPCLLGPLM
Trigger: CATCAGCGGCCCAAGTAGACATGGGCCCCCACCCAAAGGTGGCTGCAGAGGGCCCCGCACCTCTACCGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp GCGCTCGCGGTACAGTCGGTTGCCCTCGTGCCGGAGTaGCGACGCTCGCGCTGGGCCTGGAAACAACTTGCC +
Preference number: 6 (lower is better)
Translates to: ALAVQSVALVPE*RRSRWAWKQLA
Trigger: GGCAAGTTGTTTCCAGGCCCAGCGCGAGCGTCGCAACTCCGGCACGAGGGCAACCGACTGTACCGCGAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS CAA 90 bp ATTCGCCCCCGGGACGCCAAGGCGTCTGCCTGCGTGAGCAGGACTTaGCTCTCCGGCGTTGAGGTCCCCGGAGACTGCTCTTGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: IRPRDAKASACVSRT*LSGVEVPGDCSCSG
Trigger: GCCAGAGCAAGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCCCGGGGGCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp CCCTCCCAGGCGGCACTGAAAAGCGGGACAGAGGCGTaGCCCATTCGTAGCCAGCCCACGGTCCCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: PSQAALKSGTEA*PIRSQPTVPRD
Trigger: ATCCCTGGGGACCGTGGGCTGGCTACGAATGGGTCACGCCTCTGTCCCGCTTTTCAGTGCCGCCTGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS GCA 72 bp TCACGGATTCGCCCCCGGGACGCCAAGGCGTCTGCCTaGGTGAGCAGGACTTTGCTCTCCGGCGTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: SRIRPRDAKASA*VSRTLLSGVEV
Trigger: GACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCCCGGGGGCGAATCCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 72 bp TCTAGGGACCGGGGACACGAAGCAAGGAGTGGCAGCTaGAGGAAATCGGGGCAGCCACCGCCGCCATGCCAC +
Preference number: 6 (lower is better)
Translates to: SRDRGHEARSGS*RKSGQPPPPCH
Trigger: GTGGCATGGCGGCGGTGGCTGCCCCGATTTCCTCCAGCTGCCACTCCTTGCTTCGTGTCCCCGGTCCCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 72 bp TCTGCAGCCACCTTTGGGTGGGGGCCCATGTCTACTTaGGCCGCTGATGCCCCTCGCTCCGCCGACTCCAAG +
Preference number: 6 (lower is better)
Translates to: SAATFGWGPMST*AADAPRSADSK
Trigger: CTTGGAGTCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGACATGGGCCCCCACCCAAAGGTGGCTGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp TGGGCCGCTGATGCCCCTCGCTCCGCCGACTCCAAGTaGTCGCTGCTGACCTCAGCGGGCAAGCTCAGCATC +
Preference number: 6 (lower is better)
Translates to: WAADAPRSADSK*SLLTSAGKLSI
Trigger: GATGCTGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGAGCGAGGGGCATCAGCGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp CGGGACGCCAAGGCGTCTGCCTGCGTGAGCAGGACTTaGCTCTCCGGCGTTGAGGTCCCCGGAGACTGCTCT +
Preference number: 6 (lower is better)
Translates to: RDAKASACVSRT*LSGVEVPGDCS
Trigger: AGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGACGCCTTGGCGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp CACCTTTGGGTGGGGGCCCATGTCTACTTGGGCCGCTaGTGCCCCTCGCTCCGCCGACTCCAAGTTGTCGCT +
Preference number: 6 (lower is better)
Translates to: HLWVGAHVYLGR*CPSLRRLQVVA
Trigger: AGCGACAACTTGGAGTCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGACATGGGCCCCCACCCAAAGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp GTCTGCCTGCGTGAGCAGGACTTTGCTCTCCGGCGTTaGGGTCCCCGGAGACTGCTCTTGCTCTGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: VCLREQDFALRR*GPRRLLLLWLP
Trigger: CGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCTGCTCACGCAGGCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 72 bp AGGACTTTGCTCTCCGGCGTTGAGGTCCCCGGAGACTaGTCTTGCTCTGGCTCCCGCGTCGGTAGAGGTGCG +
Preference number: 6 (lower is better)
Translates to: RTLLSGVEVPGD*SCSGSRVGRGA
Trigger: CGCACCTCTACCGACGCGGGAGCCAGAGCAAGAGCAGTCTCCGGGGACCTCAACGCCGGAGAGCAAAGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS GCA 72 bp GGTGGGTCAGAGAGCGGCTCCCTGGGGAAATTCGGGTaGCCTAGTCTAGCTGGAGATGGGGGACTGCCCACG +
Preference number: 6 (lower is better)
Translates to: GGSESGSLGKFG*PSLAGDGGLPT
Trigger: CGTGGGCAGTCCCCCATCTCCAGCTAGACTAGGGCACCCGAATTTCCCCAGGGAGCCGCTCTCTGACCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS TCA 72 bp ATGCCCCTCGCTCCGCCGACTCCAAGTTGTCGCTGCTaGCCTCAGCGGGCAAGCTCAGCATCTGTTCGATCC +
Preference number: 6 (lower is better)
Translates to: MPLAPPTPSCRC*PQRASSASVRS
Trigger: GGATCGAACAGATGCTGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGAGCGAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 90 bp ATGTCTACTTGGGCCGCTGATGCCCCTCGCTCCGCCGACTCCAAGTaGTCGCTGCTGACCTCAGCGGGCAAGCTCAGCATCTGTTCGATC +
Preference number: 6 (lower is better)
Translates to: MSTWAADAPRSADSK*SLLTSAGKLSICSI
Trigger: GATCGAACAGATGCTGAGCTTGCCCGCTGAGGTCAGCAGCGACAACTTGGAGTCGGCGGAGCGAGGGGCATCAGCGGCCCAAGTAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp CTCAGCGGGCAAGCTCAGCATCTGTTCGATCCGTACTaGCTCCATGGGAAGAGGGACACGGGAGGAGACGAG +
Preference number: 6 (lower is better)
Translates to: LSGQAQHLFDPY*LHGKRDTGGDE
Trigger: CTCGTCTCCTCCCGTGTCCCTCTTCCCATGGAGTCAGTACGGATCGAACAGATGCTGAGCTTGCCCGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 72 bp CATGTGGTGCTGCTGACCATCCCCCTTCACTTTAGCTaGGTCCATCAGACTGCTGCCATCTCCCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: HVVLLTIPLHFS*VHQTAAISPGC
Trigger: GCAGCCAGGGGAGATGGCAGCAGTCTGATGGACCCAGCTAAAGTGAAGGGGGATGGTCAGCAGCACCACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000472173.5
ENST00000481285.5
CDS CAA 72 bp TGGTCATTTGGAGCCAACTTAACTGCCTCGTTGTACTaGAGCAGTGCCGCCTCCACCTGGCGCTCGCGGTAC +
Preference number: 6 (lower is better)
Translates to: WSFGANLTASLY*SSAASTWRSRY
Trigger: GTACCGCGAGCGCCAGGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAGTTAAGTTGGCTCCAAATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS CCA 72 bp GCCCGCCCACGTTCCAGGCACAGTTTACAAAAGGTGTaGCCACACGACAAGGACACGGGGTCTGATAGAAAC +
Preference number: 6 (lower is better)
Translates to: ARPRSRHSLQKV*PHDKDTGSDRN
Trigger: GTTTCTATCAGACCCCGTGTCCTTGTCGTGTGGCCACACCTTTTGTAAACTGTGCCTGGAACGTGGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CAA 72 bp AGCAAGTGGTCATTTGGAGCCAACTTAACTGCCTCGTaGTACTTGAGCAGTGCCGCCTCCACCTGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: SKWSFGANLTAS*YLSSAASTWRS
Trigger: CGAGCGCCAGGTGGAGGCGGCACTGCTCAAGTACAACGAGGCAGTTAAGTTGGCTCCAAATGACCACTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000439603.5
ENST00000481285.5
CDS TCA 72 bp CCACACGACAAGGACACGGGGTCTGATAGAAACCCATaGCATTTCCGGCACTTAAAGCCGTCCCACACCTCG +
Preference number: 6 (lower is better)
Translates to: PHDKDTGSDRNP*HFRHLKPSHTS
Trigger: CGAGGTGTGGGACGGCTTTAAGTGCCGGAAATGTCATGGGTTTCTATCAGACCCCGTGTCCTTGTCGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000481285.5
CDS CCA 72 bp AAGCAAGTGGTCATTTGGAGCTGTTGCAAGCTTGAGTaGAGATTAAACACGTGGAGACTCCGGCCCACACCC +
Preference number: 6 (lower is better)
Translates to: KQVVIWSCCKLE*RLNTWRLRPTP
Trigger: GGGTGTGGGCCGGAGTCTCCACGTGTTTAATCTCCACTCAAGCTTGCAACAGCTCCAAATGACCACTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS TCA 72 bp CAAGGTCAGATGCGTCGAAAGATGCAAGTGGTAAACTaGGAGCAGGTTTGTCCCCCTGATCAGTGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: QGQMRRKMQVVN*EQVCPPDQWED
Trigger: ATCCTCCCACTGATCAGGGGGACAAACCTGCTCTCAGTTTACCACTTGCATCTTTCGACGCATCTGACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000472173.5
ENST00000481285.5
CDS CCA 72 bp TGTGGCTCAAGGGACTTCTGCCTATTTTCCTGTCCCTaGGTTACAGCTTCAATTACACAACAGGCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: CGSRDFCLFSCP*VTASITQQAVP
Trigger: GGGCACTGCCTGTTGTGTAATTGAAGCTGTAACCCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472173.5
ENST00000481285.5
CDS TCA 72 bp GGTGCCAACAGCTTCAGGATATCGGGAGAATGTTCCTaGGAATCCCCCGGGACTGATGGTGAAAAGAAACTA +
Preference number: 6 (lower is better)
Translates to: GANSFRISGECS*ESPGTDGEKKL
Trigger: TAGTTTCTTTTCACCATCAGTCCCGGGGGATTCTCAGGAACATTCTCCCGATATCCTGAAGCTGTTGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5
CDS GCA 72 bp ATTTCTGTAGCCCCATGCTGTGGCTCAAGGGACTTCTaGCTATTTTCCTGTCCCTGGGTTACAGCTTCAATT +
Preference number: 6 (lower is better)
Translates to: ISVAPCCGSRDF*LFSCPWVTASI
Trigger: AATTGAAGCTGTAACCCAGGGACAGGAAAATAGGCAGAAGTCCCTTGAGCCACAGCATGGGGCTACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472173.5
ENST00000481285.5
CDS CAA 72 bp GTGGGAGCTCCAGATTGTCTCTTTGGGCTTCACATCTaGCTCTCTTGTTCTTTCCATCAAGGGATACACAGT +
Preference number: 6 (lower is better)
Translates to: VGAPDCLFGLHI*LSCSFHQGIHS
Trigger: ACTGTGTATCCCTTGATGGAAAGAACAAGAGAGCAAGATGTGAAGCCCAAAGAGACAATCTGGAGCTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371628.8
ENST00000481285.5
CDS TCA 72 bp CCACTGAGCGGCCATCAGCAAAGAATTGAACATTTCTaGTCTCTAGGATGCAGCCATATTCTGCAAACCCTT +
Preference number: 6 (lower is better)
Translates to: PLSGHQQRIEHF*SLGCSHILQTL
Trigger: AAGGGTTTGCAGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAATTCTTTGCTGATGGCCGCTCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
CDS GCA 72 bp ATTTTCTTGATGCCAAGCACTGTGAAAGACCGTCTTTaGACAATGGACACTTTGCGTTGTGATCTAGGCATC +
Preference number: 6 (lower is better)
Translates to: IFLMPSTVKDRL*TMDTLRCDLGI
Trigger: GATGCCTAGATCACAACGCAAAGTGTCCATTGTGCAAAGACGGTCTTTCACAGTGCTTGGCATCAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000472173.5
ENST00000481285.5
CDS TCA 72 bp CTGCATCATGCAGTGCATTCTCATGAGACTCCAAGGTaGAATAAATCTGAGACCGATTGCTATAAAGCAAGT +
Preference number: 6 (lower is better)
Translates to: LHHAVHSHETPR*NKSETDCYKAS
Trigger: ACTTGCTTTATAGCAATCGGTCTCAGATTTATTTCACCTTGGAGTCTCATGAGAATGCACTGCATGATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304778.11
ENST00000371628.8
ENST00000422289.3
ENST00000439603.5
ENST00000472173.5
ENST00000481285.5
CDS CCA 72 bp AGCTCCAGATTGTCCTGTAACAACCTTGGTAGATTATaGCTGGTAACTTCAGTAGTCATTGACTCTACGTTT +
Preference number: 6 (lower is better)
Translates to: SSRLSCNNLGRL*LVTSVVIDSTF
Trigger: AAACGTAGAGTCAATGACTACTGAAGTTACCAGCCATAATCTACCAAGGTTGTTACAGGACAATCTGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422289.3
ENST00000472173.5