RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LONRF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154359

Ensembl transcript IDs: ENST00000398246.8, ENST00000524526.2, ENST00000525024.5, ENST00000526680.5, ENST00000527055.1, ENST00000530693.1, ENST00000533751.5, ENST00000534446.1, ENST00000642519.1, ENST00000643566.1, ENST00000643654.1, ENST00000643781.1, ENST00000645502.1, ENST00000646033.1, ENST00000646126.1, ENST00000647269.2

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGTCAACCGTTCTTTCAAAGACTTCATTGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACAC +
Preference number: 1 (lower is better)
Translates to: LVNRSFKDFIDKTDS*YRGSTGRTARSHQH
Trigger: GTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAGAACGGTTGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR TCA 90 bp CAGTATATGCTGTATCTTGGTCAACCGTTCTTTCAAAGACTTCATTaGCAAAACCGACAGCTGGTATCGTGGGTCTACAGGGAGAACTGC +
Preference number: 1 (lower is better)
Translates to: QYMLYLGQPFFQRLH*QNRQLVSWVYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAGAACGGTTGACCAAGATACAGCATATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR TCA 90 bp TTTATGAATAGATGCACAGTACCATGTCAGGTTTACAATTGTTCCTaGAAACTGGCTCTAGGTTCTGCATCCAATGCCTGTCGGCCACTG +
Preference number: 1 (lower is better)
Translates to: FMNRCTVPCQVYNCS*KLALGSASNACRPL
Trigger: CAGTGGCCGACAGGCATTGGATGCAGAACCTAGAGCCAGTTTTCAGGAACAATTGTAAACCTGACATGGTACTGTGCATCTATTCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR TCA 90 bp GTTCATCAGGCAGATACTTCACTATTAATTCTTCCAACAGCTGTGTaGCACAGTACCTCCTATCTGCTAGATACTCTTTTAAGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: VHQADTSLLILPTAV*HSTSYLLDTLLSFL
Trigger: AAGAAAGCTTAAAAGAGTATCTAGCAGATAGGAGGTACTGTGTCACACAGCTGTTGGAAGAATTAATAGTGAAGTATCTGCCTGATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR TCA 90 bp AGATACTCTTTTAAGCTTTCTTTGCAAAGAGGACAATATGGTGCATaGTCTAAACAACGCTCAAGACAATTCTTACAGAACGAATGTCCG +
Preference number: 1 (lower is better)
Translates to: RYSFKLSLQRGQYGA*SKQRSRQFLQNECP
Trigger: CGGACATTCGTTCTGTAAGAATTGTCTTGAGCGTTGTTTAGATCATGCACCATATTGTCCTCTTTGCAAAGAAAGCTTAAAAGAGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR TCA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 2 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 2 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR TCA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 2 (lower is better)
Translates to: LVSWVYRENCKKPPTPCRICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR TCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGGCCTGTCGGCCACTGTaGTGCAAGTATTTACATAAA +
Preference number: 2 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKACRPL*CKYLHK
Trigger: TTTATGTAAATACTTGCATCACAGTGGCCGACAGGC...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAACTTGGGCAATAAATaGCCCTCGGCAAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTNLGNK*PSASSA
Trigger: AGCAGAACTTGCCGAGGGTCATTTATTGCCCAAGTT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 2 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
3UTR-3UTR GCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 2 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR GCA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 2 (lower is better)
Translates to: LVSWVYRENCKKPPTPCRPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR TCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGTATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 2 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR CAA 90 bp GTTTGGTTCCAGTCTGTATACTTCTTCGAATCATCAATCTGTATCTaGGCTCAAATACATGGAGAGGGCAAGGCACAGTGGGGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: VWFQSVYFFESSICI*AQIHGEGKAQWGRP
Trigger: TGGCCTACCCCACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAGATACAGATTGATGATTCGAAGAAGTATACAGACTGGAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR GCA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGGAGGCAAATTCAATTTaGAAAAACTTGTATCGCTAC +
Preference number: 2 (lower is better)
Translates to: LVSWVYRENCKKPPTPCREANSI*KNLYRY
Trigger: GTAGCGATACAAGTTTTTGCAAATTGAATTTGCCTC...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR GCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCACTGGCTCTAGGTTCTaGATCCAATGCCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: AGLRVNQIMKLSEILNLITGSRF*IQCLSA
Trigger: GGCCGACAGGCATTGGATGCAGAACCTAGAGCCAGT...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCTGTGTCATAGTCAATaGTCAAGACAGTTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTLCHSQ*SRQFSK
Trigger: CTTGCTGAACTGTCTTGACCATTGACTATGACACAG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR CCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGACATACAGACTTCATTaGGAGTTTCTCCTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKTYRLH*EFLLVF
Trigger: AAAAACAAGGAGAAACTCCCAATGAAGTCTGTATGT...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR GCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCAGGTTCTGCATCCAATaGCTGTCGGCCACTGTGATG +
Preference number: 2 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIRFCIQ*LSATVM
Trigger: CATCACAGTGGCCGACAGGCATTGGATGCAGAACCT...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR CAA 90 bp TCAGTATATGCTGTATCTTGGTCAACCGTTCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGTATCGTGGGTCTACAGGGAGAACTG +
Preference number: 2 (lower is better)
Translates to: SVYAVSWSTVLSKTS*TKPTAGIVGLQGEL
Trigger: CAGTTCTCCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAGAACGGTTGACCAAGATACAGCATATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR GCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 2 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTGGCATAACTAACATTTaGACCGAGACCAGAATTAAA +
Preference number: 2 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTGITNI*TETRIK
Trigger: TTTAATTCTGGTCTCGGTGCAAATGTTAGTTATGCC...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR CCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR TCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCAACTTGGGCAATAAATaGCCCTCGGCAAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCNLGNK*PSASSA
Trigger: AGCAGAACTTGCCGAGGGTCATTTATTGCCCAAGTT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 2 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR TCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGGTCTAAATCCTAGTTaGAGGTATTCATTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCGLNPS*RYSFAE
Trigger: TTCTGCAAATGAATACCTTCAACTAGGATTTAGACC...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR CCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATCTGTGTCATAGTCAATaGTCAAGACAGTTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNLCHSQ*SRQFSK
Trigger: CTTGCTGAACTGTCTTGACCATTGACTATGACACAG...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR TCA 90 bp CAAACAAATATTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCAGGTCTAAATCCTAGTTaGAGGTATTCATTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: QTNIGTFLVKCESSAVSSGLNPS*RYSFAE
Trigger: TTCTGCAAATGAATACCTTCAACTAGGATTTAGACC...TGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAATATTTGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATTTAAACAGTCCTCTCTaGCAGGCATTTCTGTTGAAT +
Preference number: 2 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNLNSPL*QAFLLN
Trigger: ATTCAACAGAAATGCCTGCCAGAGAGGACTGTTTAA...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 2 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR TCA 90 bp TTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCATCATATATTTGGTCTAAATCCTAGTTaGAGGTATTCATTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LEHSWSSVRVQQFLHHIFGLNPS*RYSFAE
Trigger: TTCTGCAAATGAATACCTTCAACTAGGATTTAGACC...AAATATATGATGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR GCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATGAGGCAAATTCAATTTaGAAAAACTTGTATCGCTAC +
Preference number: 2 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNEANSI*KNLYRY
Trigger: GTAGCGATACAAGTTTTTGCAAATTGAATTTGCCTC...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR-3UTR CAA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGCCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 3 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR GCA 72 bp AACCGACAGCTGGTATCGTGGGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCATGCAGGTCCATTAGG +
Preference number: 3 (lower is better)
Translates to: NRQLVSWVYREN*KKPPTPCRSIR
Trigger: CCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 3 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR TCA 72 bp AGGGGCTGCCTGAAGGTTTTCCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAATTTGGCTTCGAAATCT +
Preference number: 3 (lower is better)
Translates to: RGCLKVFLPLGH*SEMLKNLASKS
Trigger: AGATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGGAAAACCTTCAGGCAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: LVSWVYRENCKKPPTPCREMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHEMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR CCA 72 bp CGTTCTTTCAAAGACTTCATTGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGC +
Preference number: 3 (lower is better)
Translates to: RSFKDFIDKTDS*YRGSTGRTARS
Trigger: GCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR TCA 72 bp AGATGCACAGTACCATGTCAGGTTTACAATTGTTCCTaGAAACTGGCTCTAGGTTCTGCATCCAATGCCTGT +
Preference number: 3 (lower is better)
Translates to: RCTVPCQVYNCS*KLALGSASNAC
Trigger: ACAGGCATTGGATGCAGAACCTAGAGCCAGTTTTCAGGAACAATTGTAAACCTGACATGGTACTGTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR TCA 72 bp AGGTTTTCCTCCCTCTCGGGCATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAATCTGTCTCTTAAATTC +
Preference number: 3 (lower is better)
Translates to: RFSSLSGIDPKC*RIWLRNLSLKF
Trigger: GAATTTAAGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR GCA 72 bp GGCTTCGAAATCTGTCTCTTAAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCAAATCATGAAGCTCTC +
Preference number: 3 (lower is better)
Translates to: GFEICLLNSETS*RLESKPNHEAL
Trigger: GAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATTTAAGAGACAGATTTCGAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp TCAGGCAGATACTTCACTATTAATTCTTCCAACAGCTGTGTGACACAGTACCTCGTTGAAGGTATTCATTaGCAGAACCACATGATTCAG +
Preference number: 3 (lower is better)
Translates to: SGRYFTINSSNSCVTQYLVEGIH*QNHMIQ
Trigger: CTGAATCATGTGGTTCTGCAAATGAATACCTTCAAC...GAGGTACTGTGTCACACAGCTGTTGGAAGAATTAATAGTGAAGTATCTGCCTGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTGTTGAAGGTATTCATTaGCAGAACCACATGATTCAG +
Preference number: 3 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPVEGIH*QNHMIQ
Trigger: CTGAATCATGTGGTTCTGCAAATGAATACCTTCAAC...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
3UTR TCA 72 bp GCAGATACTTCACTATTAATTCTTCCAACAGCTGTGTaGCACAGTACCTCCTATCTGCTAGATACTCTTTTA +
Preference number: 3 (lower is better)
Translates to: ADTSLLILPTAV*HSTSYLLDTLL
Trigger: TAAAAGAGTATCTAGCAGATAGGAGGTACTGTGTCACACAGCTGTTGGAAGAATTAATAGTGAAGTATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp ACTGTTTGGTTCCAGTCTGTATACTTCTTCGAATCATCAATCTGTATCTTGGCTAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 3 (lower is better)
Translates to: TVWFQSVYFFESSICILANIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...AGCCAAGATACAGATTGATGATTCGAAGAAGTATACAGACTGGAACCAAACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
3UTR-3UTR CAA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATATGTCAGGTTTACAATaGTTCCTGAAAACTGGCTCT +
Preference number: 3 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNMSGLQ*FLKTGS
Trigger: AGAGCCAGTTTTCAGGAACAATTGTAAACCTGACAT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCGGCCCTGCGGCGCTaGGGCCATCTCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTSALRR*GHLPTP
Trigger: GGGAGTCGGGAGATGGCCCCAGCGCCGCAGGGCCGA...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCTCCCGACTCCCTCCTaGGGAGGTCCTCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLPTPS*GGPRHR
Trigger: GCGGTGGCGAGGACCTCCCCAGGAGGGAGTCGGGAG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGGCGGAGCCGGTAGTTaGACACCAGGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLGGAGS*TPGSPP
Trigger: TGGTGGACTGCCTGGTGTTCAACTACCGGCTCCGCC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACCCGCCCCCAGCTTATaGAATTCTGCCCTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLPAPSL*NSALPR
Trigger: CCGCGGGAGGGCAGAATTGCATAAGCTGGGGGCGGG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGGTGACTTTTGTGGGTaGGGAAGGGAGACGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLGDFCG*GRETPP
Trigger: AGGCGGCGTCTCCCTTCCTCACCCACAAAAGTCACC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGCCAGCCGATGGCCGCTaGCGCCGCCCACTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVPADGR*RRPLPR
Trigger: TCTGGGAAGTGGGCGGCGGCAGCGGCCATCGGCTGG...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCCTGCCCGGCCTAGTTaGCCTCGCGGGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKPARPS*PRGGFS
Trigger: AGAGAATCCCCCGCGAGGGCAACTAGGCCGGGCAGG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATTTTTGCCAGCACAGTTaGCCCTCCGTATCCACAGGC +
Preference number: 4 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHFCQHS*PSVSTG
Trigger: GCCTGTGGATACGGAGGGCCAACTGTGCTGGCAAAA...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGACGACGCTGGTTCTaGAGTCTGAAGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGRRWF*SLKRRW
Trigger: CCATCGCCGCTTCAGACTTCAGAACCAGCGTCGTCC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGTGACTTTTGTGGGTaGGGAAGGGAGACGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGDFCG*GRETPP
Trigger: AGGCGGCGTCTCCCTTCCTCACCCACAAAAGTCACC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCCAGCCGATGGCCGCTaGCGCCGCCCACTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWPADGR*RRPLPR
Trigger: TCTGGGAAGTGGGCGGCGGCAGCGGCCATCGGCTGG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCCTCCCGACTCCCTCCTaGGGAGGTCCTCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCLPTPS*GGPRHR
Trigger: GCGGTGGCGAGGACCTCCCCAGGAGGGAGTCGGGAG...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTCGGCCCTGCGGCGCTaGGGCCATCTCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNSALRR*GHLPTP
Trigger: GGGAGTCGGGAGATGGCCCCAGCGCCGCAGGGCCGA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCAGTCTGAAGCGGCGATaGCGGCGGCCAGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCSLKRR*RRPEAA
Trigger: CGCCGCCTCTGGCCGCCGCCATCGCCGCTTCAGACT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCACTTCTCGGCCAGGTaGTTGAGGACGACGCTGGTT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTHFSAR*LRTTLV
Trigger: AACCAGCGTCGTCCTCAACCACCTGGCCGAGAAGTG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTCGGGCCCGCTCGCGCTaGCCCGGAAACCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPRARSR*PGNHFS
Trigger: CGAGAAGTGGTTTCCGGGCCAGCGCGAGCGGGCCCG...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGGACGACGCTGGTTCTaGAGTCTGAAGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSGRRWF*SLKRRW
Trigger: CCATCGCCGCTTCAGACTTCAGAACCAGCGTCGTCC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATCGGGCCCGCTCGCGCTaGCCCGGAAACCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNRARSR*PGNHFS
Trigger: CGAGAAGTGGTTTCCGGGCCAGCGCGAGCGGGCCCG...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTCCCAATTGTCCCGGTaGCTTTTGTGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLSQLSR*LLWVRK
Trigger: CTTCCTCACCCACAAAAGTCACCGGGACAATTGGGA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGCCACCAACACCATaGAGGTCCATTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLKPPTP*RSIRGC
Trigger: GCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAGGTTCTGCATCCAATaGCTGTCGGCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLRFCIQ*LSATVM
Trigger: CATCACAGTGGCCGACAGGCATTGGATGCAGAACCT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGCAAGTAAATGATTTTTaGCAGCACAGTTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKQVNDF*QHSWPS
Trigger: GGAGGGCCAACTGTGCTGGCAAAAATCATTTACTTG...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCCTGCCCGGCCTAGTTaGCCTCGCGGGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWPARPS*PRGGFS
Trigger: AGAGAATCCCCCGCGAGGGCAACTAGGCCGGGCAGG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCAGCTTATGCAATTCTaGCCTCCCGCGGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTQLMQF*PPAVPN
Trigger: ATTGGGAACCGCGGGAGGGCAGAATTGCATAAGCTG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLDKTDS*YRGSTG
Trigger: CCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAGGCCAGGAGAAGCGTaGCAGAGAACTATGGATCAG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTRPGEA*QRTMDQ
Trigger: CTGATCCATAGTTCTCTGCCACGCTTCTCCTGGCCT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCAGCCTGATCCTAAGTaGAAAGGCCAGGAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLQPDPK*KGQEKR
Trigger: ACGCTTCTCCTGGCCTTTCCACTTAGGATCAGGCTG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLLPLGH*SEMLKN
Trigger: ATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATCCCAATTGTCCCGGTaGCTTTTGTGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLSQLSR*LLWVRK
Trigger: CTTCCTCACCCACAAAAGTCACCGGGACAATTGGGA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTACGTAAGAGAAGCTTaGAACTGCCCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTYVREA*NCPLSA
Trigger: CGCTGAAAGGGGGCAGTTTCAAGCTTCTCTTACGTA...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: LVSWVYRENCKKPPTPCRNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAAGCCACCAACACCATaGAGGTCCATTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKKPPTP*RSIRGC
Trigger: GCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTVYREN*KKPPTP
Trigger: TGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGAC...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLVYREN*KKPPTP
Trigger: TGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGAC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGACTGGCTCTAGGTTCTaGATCCAATGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKTGSRF*IQCLSA
Trigger: GGCCGACAGGCATTGGATGCAGAACCTAGAGCCAGT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLDKTDS*YRGSTG
Trigger: CCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCGTGGCAGAGAACTATaGATCAGGCAGCCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKRGREL*IRQPLS
Trigger: TGAGAGGGGCTGCCTGATCCATAGTTCTCTGCCACG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCGTGGCAGAGAACTATaGATCAGGCAGCCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSRGREL*IRQPLS
Trigger: TGAGAGGGGCTGCCTGATCCATAGTTCTCTGCCACG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGCCGAGGCTGCTTCTTaGAGACTAAGAAATGCACTC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLAEAAS*RLRNAL
Trigger: GAGTGCATTTCTTAGTCTCCAAGAAGCAGCCTCGGC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGGCGGAGCCGGTAGTTaGACACCAGGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNGGAGS*TPGSPP
Trigger: TGGTGGACTGCCTGGTGTTCAACTACCGGCTCCGCC...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCCTTTGACAGGCTCTaGAGTGACCTCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTSFDRL*SDLWYF
Trigger: GAAATACCAGAGGTCACTTCAGAGCCTGTCAAAGGA...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLIDCAD*ARFKLP
Trigger: AGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTAT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTIDCAD*ARFKLP
Trigger: AGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTAT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGGACAATATGGTGCATaGTCTAAACAACGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHGQYGA*SKQRSR
Trigger: TCTTGAGCGTTGTTTAGATCATGCACCATATTGTCC...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAACTTGGGCAATAAATaGCCCTCGGCAAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLNLGNK*PSASSA
Trigger: AGCAGAACTTGCCGAGGGTCATTTATTGCCCAAGTT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCTGAAACAGGCCAGCTaGAACTTTCAAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTLKQAS*NFQEEP
Trigger: TGGTTCCTCTTGAAAGTTTCAGCTGGCCTGTTTCAG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLVYREN*KKPPTP
Trigger: TGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGAC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGGTTCTGCATCCAATaGCTGTCGGCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKRFCIQ*LSATVM
Trigger: CATCACAGTGGCCGACAGGCATTGGATGCAGAACCT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCAGCTTATGCAATTCTaGCCTCCCGCGGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKQLMQF*PPAVPN
Trigger: ATTGGGAACCGCGGGAGGGCAGAATTGCATAAGCTG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTTAGGAGGCCGAGGCTaGTTCTTGGAGACTAAGAAA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLLGGRG*FLETKK
Trigger: TTTCTTAGTCTCCAAGAAGCAGCCTCGGCCTCCTAA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGAGGCCGAGGCTaGTTCTTGGAGACTAAGAAA +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTLGGRG*FLETKK
Trigger: TTTCTTAGTCTCCAAGAAGCAGCCTCGGCCTCCTAA...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGCATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LVSWVYRENCKKPPTPCRHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKDKTDS*YRGSTG
Trigger: CCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSDKTDS*YRGSTG
Trigger: CCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGGCCAGGAGAAGCGTaGCAGAGAACTATGGATCAG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKRPGEA*QRTMDQ
Trigger: CTGATCCATAGTTCTCTGCCACGCTTCTCCTGGCCT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCAGCCTGATCCTAAGTaGAAAGGCCAGGAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKQPDPK*KGQEKR
Trigger: ACGCTTCTCCTGGCCTTTCCACTTAGGATCAGGCTG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACACCCCCACAAGAGGTaGCAACCAAAAATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLHPHKR*QPKISP
Trigger: TGGAGAGATTTTTGGTTGCCACCTCTTGTGGGGGTG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATCCTTTGACAGGCTCTaGAGTGACCTCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLSFDRL*SDLWYF
Trigger: GAAATACCAGAGGTCACTTCAGAGCCTGTCAAAGGA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLPLGH*SEMLKN
Trigger: ATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSLPLGH*SEMLKN
Trigger: ATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000525024.5
ENST00000526680.5
ENST00000643654.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGGGTCTAAATCCTAGTTaGAGGTATTCATTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKGLNPS*RYSFAE
Trigger: TTCTGCAAATGAATACCTTCAACTAGGATTTAGACC...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGTGGTCTGTACAACTaGGTCCAGTTTCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGGLYN*VQFLFS
Trigger: AGAGAAGAGAAACTGGACTCAGTTGTACAGACCACC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTTGCAGCTTTGCAGGTaGAAAATCTTCATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLLQLCR*KIFIKG
Trigger: GCCCTTGATGAAGATTTTGCACCTGCAAAGCTGCAA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGAAGCCACCAACACCATaGAGGTCCATTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVKPPTP*RSIRGC
Trigger: GCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSVYREN*KKPPTP
Trigger: TGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGAC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGGGCATAACTAACATTTaGACCGAGACCAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKGITNI*TETRIK
Trigger: TTTAATTCTGGTCTCGGTGCAAATGTTAGTTATGCC...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAACACTTCTCGGCCAGGTaGTTGAGGACGACGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQHFSAR*LRTTLV
Trigger: AACCAGCGTCGTCCTCAACCACCTGGCCGAGAAGTG...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTTTACAATCAAGTCACTaGGTTCTGCTCGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSLQSSH*VLLAAP
Trigger: AGGCGCTGCGAGCAGAACCCAGTGACTTGATTGTAA...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCAGGCAGATACTTCACTATTAATTCTTCCAACAGCTGTGTGACACAGTACCTCTTTTGCCAGCACAGTTaGCCCTCCGTATCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SGRYFTINSSNSCVTQYLFCQHS*PSVSTG
Trigger: GCCTGTGGATACGGAGGGCCAACTGTGCTGGCAAAA...GAGGTACTGTGTCACACAGCTGTTGGAAGAATTAATAGTGAAGTATCTGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGCCGAGGCTGCTTCTTaGAGACTAAGAAATGCACTC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKAEAAS*RLRNAL
Trigger: GAGTGCATTTCTTAGTCTCCAAGAAGCAGCCTCGGC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTGGTCAGTTACTAGGTaGTCTGTACAACTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLWSVTR*SVQLSP
Trigger: TGGACTCAGTTGTACAGACCACCTAGTAACTGACCA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAAGTCACTGGGTTCATaGTCAGTTACTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLKSLGS*SVTRWS
Trigger: AGACCACCTAGTAACTGACCATGAACCCAGTGACTT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSIDCAD*ARFKLP
Trigger: AGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTAT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTATTCTTGGTCAAGTGTaGGAGTTCAGCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLILGQV*EFSSFF
Trigger: GAAGAAACTGCTGAACTCTCACACTTGACCAAGAAT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AACAACCTCATGCAGAGAGAACACTCGAAATCTGAGACATCGATTAATTCTTCTCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: NNLMQREHSKSETSINSSPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...AGAAGAATTAATCGATGTCTCAGATTTCGAGTGTTCTCTCTGCATGAGGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATCCATTAGGGGCTGCCTaGAGGTTTTCCTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNPLGAA*RFSSLS
Trigger: CGAGAGGGAGGAAAACCTTCAGGCAGCCCCTAATGG...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000525024.5
ENST00000526680.5
ENST00000643654.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGAAATAAGCAGGATCTaGAACAGGCCAGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLEISRI*NRPAET
Trigger: AGTTTCAGCTGGCCTGTTTCAGATCCTGCTTATTTC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGGTGGTCTGTACAACTaGGTCCAGTTTCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKGGLYN*VQFLFS
Trigger: AGAGAAGAGAAACTGGACTCAGTTGTACAGACCACC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTGGTATTTCTTCACTCTaGTTTGGGCTAGGTTCATTG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTGISSL*FGLGSL
Trigger: CAATGAACCTAGCCCAAAGCAGAGTGAAGAAATACC...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAAAGCCACCAACACCATaGAGGTCCATTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQKPPTP*RSIRGC
Trigger: GCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTT...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGAAGCCACCAACACCATaGAGGTCCATTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWKPPTP*RSIRGC
Trigger: GCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTAAGCCACCAACACCATaGAGGTCCATTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPKPPTP*RSIRGC
Trigger: GCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTT...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGGAGGCAAATTCAATTTaGAAAAACTTGTATCGCTAC +
Preference number: 4 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKEANSI*KNLYRY
Trigger: GTAGCGATACAAGTTTTTGCAAATTGAATTTGCCTC...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCACTGGCTCTAGGTTCTaGATCCAATGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCTGSRF*IQCLSA
Trigger: GGCCGACAGGCATTGGATGCAGAACCTAGAGCCAGT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGACTGGCTCTAGGTTCTaGATCCAATGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWTGSRF*IQCLSA
Trigger: GGCCGACAGGCATTGGATGCAGAACCTAGAGCCAGT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGCTGCTTTAAACTCTTaGAGACCAGCATATGATTCC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLAALNS*RPAYDS
Trigger: GGAATCATATGCTGGTCTCCAAGAGTTTAAAGCAGC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTGCTGCTTTAAACTCTTaGAGACCAGCATATGATTCC +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTAALNS*RPAYDS
Trigger: GGAATCATATGCTGGTCTCCAAGAGTTTAAAGCAGC...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR CCA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAAGGTTTATCAACAGTaGCACTTGGGGCCTGATAAT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLKVYQQ*HLGPDN
Trigger: ATTATCAGGCCCCAAGTGCCACTGTTGATAAACCTT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGGTTCATTGAGAGACTaGGACTCTTCCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSGSLRD*DSSITE
Trigger: TTCAGTGATGGAAGAGTCTCAGTCTCTCAATGAACC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGACAATATGGTGCATaGTCTAAACAACGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGQYGA*SKQRSR
Trigger: TCTTGAGCGTTGTTTAGATCATGCACCATATTGTCC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGCCTGTCGGCCACTGTaGTGCAAGTATTTACATAAA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSACRPL*CKYLHK
Trigger: TTTATGTAAATACTTGCATCACAGTGGCCGACAGGC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTACTGTGACAAGTAAATaGTTTTTGCCAGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTTVTSK*FLPAQL
Trigger: CAACTGTGCTGGCAAAAATCATTTACTTGTCACAGT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGAAATAAGCAGGATCTaGAACAGGCCAGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKEISRI*NRPAET
Trigger: AGTTTCAGCTGGCCTGTTTCAGATCCTGCTTATTTC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTTGCAGCTTTGCAGGTaGAAAATCTTCATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLQLCR*KIFIKG
Trigger: GCCCTTGATGAAGATTTTGCACCTGCAAAGCTGCAA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTTGTACTTGCAGCTTTaGAGGTGCAAAATCTTCATC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLLYLQL*RCKIFI
Trigger: GATGAAGATTTTGCACCTGCAAAGCTGCAAGTACAA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCAGGTTCTGCATCCAATaGCTGTCGGCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCRFCIQ*LSATVM
Trigger: CATCACAGTGGCCGACAGGCATTGGATGCAGAACCT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTAGGTTCTGCATCCAATaGCTGTCGGCCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPRFCIQ*LSATVM
Trigger: CATCACAGTGGCCGACAGGCATTGGATGCAGAACCT...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATACTGGCTCTAGGTTCTaGATCCAATGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNTGSRF*IQCLSA
Trigger: GGCCGACAGGCATTGGATGCAGAACCTAGAGCCAGT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATTCTTCACTCTGCTTTaGGCTAGGTTCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLFFTLL*ARFIER
Trigger: TCTCTCAATGAACCTAGCCCAAAGCAGAGTGAAGAA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTTAAACAGTCCTCTCTaGCAGGCATTTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLLNSPL*QAFLLN
Trigger: ATTCAACAGAAATGCCTGCCAGAGAGGACTGTTTAA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGCTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCGACAAAACCGACAGCTaGTATCGTGGGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIDKTDS*YRGSTG
Trigger: CCCTGTAGACCCACGATACCAGCTGTCGGTTTTGTC...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATTCATCCAACTGCTTTaGGCTAGGTTCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLFIQLL*ARFIER
Trigger: TCTCTCAATGAACCTAGCCCAAAGCAGTTGGATGAA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAATCAACAGTGGCACTTaGGGCCTGATAATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLINSGT*GLIILC
Trigger: ACAAAGAATTATCAGGCCCCAAGTGCCACTGTTGAT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGTTTATCAACAGTaGCACTTGGGGCCTGATAAT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLKVYQQ*HLGPDN
Trigger: ATTATCAGGCCCCAAGTGCCACTGTTGATAAACCTT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTTGGTCAGTTACTAGGTaGTCTGTACAACTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSWSVTR*SVQLSP
Trigger: TGGACTCAGTTGTACAGACCACCTAGTAACTGACCA...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAAGTCACTGGGTTCATaGTCAGTTACTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKKSLGS*SVTRWS
Trigger: AGACCACCTAGTAACTGACCATGAACCCAGTGACTT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
3UTR CAA 72 bp GCTGTATCTTGGTCAACCGTTCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGTATCGTGGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: AVSWSTVLSKTS*TKPTAGIVGLQ
Trigger: CTGTAGACCCACGATACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAGAACGGTTGACCAAGATACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGGCCAATCTGGAAGTTaGAAAAGAACTGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLGQSGS*KRTAFK
Trigger: TTTAAATGCAGTTCTTTTTCAACTTCCAGATTGGCC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVIDCAD*ARFKLP
Trigger: AGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTAT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGGACAATATGGTGCATaGTCTAAACAACGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKGQYGA*SKQRSR
Trigger: TCTTGAGCGTTGTTTAGATCATGCACCATATTGTCC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGGACAATATGGTGCATaGTCTAAACAACGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSGQYGA*SKQRSR
Trigger: TCTTGAGCGTTGTTTAGATCATGCACCATATTGTCC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGATTCTTGGTCAAGTGTaGGAGTTCAGCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKILGQV*EFSSFF
Trigger: GAAGAAACTGCTGAACTCTCACACTTGACCAAGAAT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTIDPKC*RIWLRN
Trigger: ATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAAT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTACGTAAGAGAAGCTTaGAACTGCCCCCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWYVREA*NCPLSA
Trigger: CGCTGAAAGGGGGCAGTTTCAAGCTTCTCTTACGTA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTCCTCACGAAGGCACTaGAAGAATACAAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKSSRRH*KNTKIS
Trigger: GGAGATTTTTGTATTCTTTCAGTGCCTTCGTGAGGA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTTCCTCACGAAGGCACTaGAAGAATACAAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSSSRRH*KNTKIS
Trigger: GGAGATTTTTGTATTCTTTCAGTGCCTTCGTGAGGA...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGGTATTTCTTCACTCTaGTTTGGGCTAGGTTCATTG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSGISSL*FGLGSL
Trigger: CAATGAACCTAGCCCAAAGCAGAGTGAAGAAATACC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPVYREN*KKPPTP
Trigger: TGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGAC...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAGTCTACAGGGAGAACTaGAAGAAGCCACCAACACCA +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQVYREN*KKPPTP
Trigger: TGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGAC...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGGCATAACTAACATTTaGACCGAGACCAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLGITNI*TETRIK
Trigger: TTTAATTCTGGTCTCGGTGCAAATGTTAGTTATGCC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATCCCCTATCATTTCATaGCAATGGATAGACACTAAG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLSPIIS*QWIDTK
Trigger: CTTAGTGTCTATCCATTGGCATGAAATGATAGGGGA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATTTCTATTTTATACCTaGCTACTCCTCACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLFLFYT*LLLTKA
Trigger: TGCCTTCGTGAGGAGTAGGCAGGTATAAAATAGAAA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTTCTTCACTCTGCTTTaGGCTAGGTTCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKFFTLL*ARFIER
Trigger: TCTCTCAATGAACCTAGCCCAAAGCAGAGTGAAGAA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATTAAACAGTCCTCTCTaGCAGGCATTTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLLNSPL*QAFLLN
Trigger: ATTCAACAGAAATGCCTGCCAGAGAGGACTGTTTAA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTCTTGGCTCAAATACATaGAGAGGGCAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPLGSNT*RGQGTV
Trigger: CACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAG...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGATCAACAGTGGCACTTaGGGCCTGATAATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKINSGT*GLIILC
Trigger: ACAAAGAATTATCAGGCCCCAAGTGCCACTGTTGAT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
3UTR CAA 72 bp CAGTCTGTATACTTCTTCGAATCATCAATCTGTATCTaGGCTCAAATACATGGAGAGGGCAAGGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QSVYFFESSICI*AQIHGEGKAQW
Trigger: CCACTGTGCCTTGCCCTCTCCATGTATTTGAGCCAAGATACAGATTGATGATTCGAAGAAGTATACAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGCCAATCTGGAAGTTaGAAAAGAACTGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGQSGS*KRTAFK
Trigger: TTTAAATGCAGTTCTTTTTCAACTTCCAGATTGGCC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTTCCTTTGACAGGCTCTaGAGTGACCTCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPSFDRL*SDLWYF
Trigger: GAAATACCAGAGGTCACTTCAGAGCCTGTCAAAGGA...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTCCTTTGACAGGCTCTaGAGTGACCTCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWSFDRL*SDLWYF
Trigger: GAAATACCAGAGGTCACTTCAGAGCCTGTCAAAGGA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWIDCAD*ARFKLP
Trigger: AGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTAT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLIDPKC*RIWLRN
Trigger: ATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAAT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AACAACCTCATGCAGAGAGAACACTCGAAATCTGAGACATCGATTAATTCTTCTCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: NNLMQREHSKSETSINSSLPLGH*SEMLKN
Trigger: ATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAG...AGAAGAATTAATCGATGTCTCAGATTTCGAGTGTTCTCTCTGCATGAGGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNLPLGH*SEMLKN
Trigger: ATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAG...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGTCTAAATCCTAGTTaGAGGTATTCATTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGLNPS*RYSFAE
Trigger: TTCTGCAAATGAATACCTTCAACTAGGATTTAGACC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGAACTTGGGCAATAAATaGCCCTCGGCAAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWNLGNK*PSASSA
Trigger: AGCAGAACTTGCCGAGGGTCATTTATTGCCCAAGTT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTTGTACTTGCAGCTTTaGAGGTGCAAAATCTTCATC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLYLQL*RCKIFI
Trigger: GATGAAGATTTTGCACCTGCAAAGCTGCAAGTACAA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCAATCTGGCCATCAATaGAGCCAGATTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWQSGHQ*SQIRVT
Trigger: AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGAGGCAAATTCAATTTaGAAAAACTTGTATCGCTAC +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLEANSI*KNLYRY
Trigger: GTAGCGATACAAGTTTTTGCAAATTGAATTTGCCTC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGCATAACTAACATTTaGACCGAGACCAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGITNI*TETRIK
Trigger: TTTAATTCTGGTCTCGGTGCAAATGTTAGTTATGCC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTTTTCTATTTTATACCTaGCTACTCCTCACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSFLFYT*LLLTKA
Trigger: TGCCTTCGTGAGGAGTAGGCAGGTATAAAATAGAAA...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTTACAATCAAGTCACTaGGTTCTGCTCGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNLQSSH*VLLAAP
Trigger: AGGCGCTGCGAGCAGAACCCAGTGACTTGATTGTAA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTACATACAGACTTCATTaGGAGTTTCTCCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTTYRLH*EFLLVF
Trigger: AAAAACAAGGAGAAACTCCCAATGAAGTCTGTATGT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAGTGCAAACAAATATTaGAACATTCTTGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: CAKAADNLAINAARLGSLSANKY*NILGQV
Trigger: CACTTGACCAAGAATGTTCCAATATTTGTTTGCACT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCATCATATATTTCGACAGCTGGTATCGTaGGTCTACAGGGAGAACTGC +
Preference number: 4 (lower is better)
Translates to: LEHSWSSVRVQQFLHHIFRQLVS*VYRENC
Trigger: GCAGTTCTCCCTGTAGACCCACGATACCAGCTGTCG...AAATATATGATGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AACAACCTCATGCAGAGAGAACACTCGAAATCTGAGACATCGATTAATTCTTCTAGGCAGCAGACAATCTaGCCATCAATGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: NNLMQREHSKSETSINSSRQQTI*PSMQPD
Trigger: ATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCT...AGAAGAATTAATCGATGTCTCAGATTTCGAGTGTTCTCTCTGCATGAGGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAGTGCAAACAAATATTaGAACATTCTTGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTSANKY*NILGQA
Trigger: AGCTTGACCAAGAATGTTCCAATATTTGTTTGCACT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525024.5
ENST00000646126.1
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTATTACAATCAAGTCACTaGGTTCATGGTCAGTTACTA +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLLQSSH*VHGQLL
Trigger: TAGTAACTGACCATGAACCCAGTGACTTGATTGTAA...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGGTTCATTGAGAGACTaGGACTCTTCCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCGSLRD*DSSITE
Trigger: TTCAGTGATGGAAGAGTCTCAGTCTCTCAATGAACC...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGGGTTCATTGAGAGACTaGGACTCTTCCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWGSLRD*DSSITE
Trigger: TTCAGTGATGGAAGAGTCTCAGTCTCTCAATGAACC...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCGGTTCATTGAGAGACTaGGACTCTTCCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIGSLRD*DSSITE
Trigger: TTCAGTGATGGAAGAGTCTCAGTCTCTCAATGAACC...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTCCTTTGACAGGCTCTaGAGTGACCTCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNSFDRL*SDLWYF
Trigger: GAAATACCAGAGGTCACTTCAGAGCCTGTCAAAGGA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGATTCTTGGTCAAGTGTaGGAGTTCAGCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVILGQV*EFSSFF
Trigger: GAAGAAACTGCTGAACTCTCACACTTGACCAAGAAT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSIDPKC*RIWLRN
Trigger: ATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAAT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKIDPKC*RIWLRN
Trigger: ATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAAT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000525024.5
ENST00000526680.5
ENST00000643654.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATAACTTGGGCAATAAATaGCCCTCGGCAAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNNLGNK*PSASSA
Trigger: AGCAGAACTTGCCGAGGGTCATTTATTGCCCAAGTT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGGCCTGTCGGCCACTGTaGTGCAAGTATTTACATAAA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWACRPL*CKYLHK
Trigger: TTTATGTAAATACTTGCATCACAGTGGCCGACAGGC...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGCCTGTCGGCCACTGTaGTGCAAGTATTTACATAAA +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCACRPL*CKYLHK
Trigger: TTTATGTAAATACTTGCATCACAGTGGCCGACAGGC...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGGCTGCTTTAAACTCTTaGAGACCAGCATATGATTCC +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVAALNS*RPAYDS
Trigger: GGAATCATATGCTGGTCTCCAAGAGTTTAAAGCAGC...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAACATACAGACTTCATTaGGAGTTTCTCCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLTYRLH*EFLLVF
Trigger: AAAAACAAGGAGAAACTCCCAATGAAGTCTGTATGT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAGTGCAAACAAATATTaGAACATTCTTGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLSANKY*NILGQV
Trigger: CACTTGACCAAGAATGTTCCAATATTTGTTTGCACT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAATCATTTCATGCCAATaGATAGACACTAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLIISCQ*IDTKIL
Trigger: CAAGATCTTAGTGTCTATCCATTGGCATGAAATGAT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTTACAATCAAGTCACTaGGTTCATGGTCAGTTACTA +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLQSSH*VHGQLL
Trigger: TAGTAACTGACCATGAACCCAGTGACTTGATTGTAA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGGGACAATATGGTGCATaGTCTAAACAACGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWGQYGA*SKQRSR
Trigger: TCTTGAGCGTTGTTTAGATCATGCACCATATTGTCC...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCATTCTTGGTCAAGTGTaGGAGTTCAGCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCILGQV*EFSSFF
Trigger: GAAGAAACTGCTGAACTCTCACACTTGACCAAGAAT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAATTCTTGGTCAAGTGTaGGAGTTCAGCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQILGQV*EFSSFF
Trigger: GAAGAAACTGCTGAACTCTCACACTTGACCAAGAAT...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATCTCCCTCTCGGGCATTaGTCCGAAATGCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNLPLGH*SEMLKN
Trigger: ATTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAG...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGGGTATTTCTTCACTTTaGTTCCAACACTGTGACAAG +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVGISSL*FQHCDK
Trigger: CTTGTCACAGTGTTGGAATCAAAGTGAAGAAATACC...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTTGCAGCTTTGCAGGTaGAAAATCTTCATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNLQLCR*KIFIKG
Trigger: GCCCTTGATGAAGATTTTGCACCTGCAAAGCTGCAA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTGTACTTGCAGCTTTaGAGGTGCAAAATCTTCATC +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVLYLQL*RCKIFI
Trigger: GATGAAGATTTTGCACCTGCAAAGCTGCAAGTACAA...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGGTATTTCTTCACTCTaGTTTGGGCTAGGTTCATTG +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCGISSL*FGLGSL
Trigger: CAATGAACCTAGCCCAAAGCAGAGTGAAGAAATACC...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGGCTGCTTTAAACTCTTaGAGACCAGCATATGATTCC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWAALNS*RPAYDS
Trigger: GGAATCATATGCTGGTCTCCAAGAGTTTAAAGCAGC...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTTCTTCACTCTGCTTTaGGCTAGGTTCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWFFTLL*ARFIER
Trigger: TCTCTCAATGAACCTAGCCCAAAGCAGAGTGAAGAA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000533751.5
ENST00000642519.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTAGTGCAAACAAATATTaGAACATTCTTGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSSANKY*NILGQV
Trigger: CACTTGACCAAGAATGTTCCAATATTTGTTTGCACT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGCAAACAAATATTaGAACATTCTTGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKSANKY*NILGQV
Trigger: CACTTGACCAAGAATGTTCCAATATTTGTTTGCACT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAACTGTGTCATAGTCAATaGTCAAGACAGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQLCHSQ*SRQFSK
Trigger: CTTGCTGAACTGTCTTGACCATTGACTATGACACAG...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCCTGTGTCATAGTCAATaGTCAAGACAGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCLCHSQ*SRQFSK
Trigger: CTTGCTGAACTGTCTTGACCATTGACTATGACACAG...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTCTGTGTCATAGTCAATaGTCAAGACAGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPLCHSQ*SRQFSK
Trigger: CTTGCTGAACTGTCTTGACCATTGACTATGACACAG...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGCAAACAAATATTaGAACATTCTTGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKSANKY*NILGQA
Trigger: AGCTTGACCAAGAATGTTCCAATATTTGTTTGCACT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525024.5
ENST00000646126.1
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTTCATCCAACTGCTTTaGGCTAGGTTCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWFIQLL*ARFIER
Trigger: TCTCTCAATGAACCTAGCCCAAAGCAGTTGGATGAA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNIDCAD*ARFKLP
Trigger: AGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTAT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATAACTTGGGCAATAAATaGCCCTCGGCAAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNNLGNK*PSASSA
Trigger: AGCAGAACTTGCCGAGGGTCATTTATTGCCCAAGTT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGACTGTGACAAGTAAATaGTTTTTGCCAGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWTVTSK*FLPAQL
Trigger: CAACTGTGCTGGCAAAAATCATTTACTTGTCACAGT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAGGTATTTCTTCACTTTaGTTCCAACACTGTGACAAG +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQGISSL*FQHCDK
Trigger: CTTGTCACAGTGTTGGAATCAAAGTGAAGAAATACC...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTCCGTCCGGTAAGAAATaGACGTTTCTAATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPPSGKK*TFLICN
Trigger: GTTACAAATTAGAAACGTGCATTTCTTACCGGACGG...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATAATTCTGAAACCAGCTaGAGGCTTGAGAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNNSETS*RLESKP
Trigger: TGGTTTACTCTCAAGCCTGCAGCTGGTTTCAGAATT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAAACAAATATTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCACAAGTAAATGATTTTTaGCAGCACAGTTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QTNIGTFLVKCESSAVSSQVNDF*QHSWPS
Trigger: GGAGGGCCAACTGTGCTGGCAAAAATCATTTACTTG...TGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAATATTTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTCCCCTATCATTTCATaGCAATGGATAGACACTAAG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWSPIIS*QWIDTK
Trigger: CTTAGTGTCTATCCATTGGCATGAAATGATAGGGGA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTTAAACAGTCCTCTCTaGCAGGCATTTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWLNSPL*QAFLLN
Trigger: ATTCAACAGAAATGCCTGCCAGAGAGGACTGTTTAA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATCTGTGTCATAGTCAATaGTCAAGACAGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNLCHSQ*SRQFSK
Trigger: CTTGCTGAACTGTCTTGACCATTGACTATGACACAG...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTTGGAGACCAGCATATaGTTCCGCTCTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNLETSI*FRSVNF
Trigger: AAAATTTACAGAGCGGAATCATATGCTGGTCTCCAA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR TCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCGGCCAATCTGGAAGTTaGAAAAGAACTGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIGQSGS*KRTAFK
Trigger: TTTAAATGCAGTTCTTTTTCAACTTCCAGATTGGCC...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCTATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAATATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: AGLRVNQIMKLSEILNLIIDPKC*RIWLRN
Trigger: ATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAAT...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGATTGATCCGAAATGCTaGAGAATTTGGCTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWIDPKC*RIWLRN
Trigger: ATTTCGAAGCCAAATTCTTCAGCATTTCGGATCAAT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATATTTGCAGAACCACATaGTTCAGGAGGTCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNICRTT*FRRSKE
Trigger: TTCCTTCGACCTCCTGAATCATGTGGTTCTGCAAAT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTGGTCTAAATCCTAGTTaGAGGTATTCATTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPGLNPS*RYSFAE
Trigger: TTCTGCAAATGAATACCTTCAACTAGGATTTAGACC...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATGCCTGTCGGCCACTGTaGTGCAAGTATTTACATAAA +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNACRPL*CKYLHK
Trigger: TTTATGTAAATACTTGCATCACAGTGGCCGACAGGC...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR GCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGGAGGCAAATTCAATTTaGAAAAACTTGTATCGCTAC +
Preference number: 4 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVEANSI*KNLYRY
Trigger: GTAGCGATACAAGTTTTTGCAAATTGAATTTGCCTC...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTTAAACAGTCCTCTCTaGCAGGCATTTCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNLNSPL*QAFLLN
Trigger: ATTCAACAGAAATGCCTGCCAGAGAGGACTGTTTAA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CGACACACATTCAATGCGTGTTTTTCTGTGCAAGTTCTTAGTGGTCTAAATCCTATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RHTFNACFSVQVLSGLNPILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...AGGATTTAGACCACTAAGAACTTGCACAGAAAAACACGCATTGAATGTGTGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TCAGGCAGATACTTCACTATTAATTCTTCCAACAGCTGTGTGACACAGTACCTCAGTGCAAACAAATATTaGAACATTCTTGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SGRYFTINSSNSCVTQYLSANKY*NILGQV
Trigger: CACTTGACCAAGAATGTTCCAATATTTGTTTGCACT...GAGGTACTGTGTCACACAGCTGTTGGAAGAATTAATAGTGAAGTATCTGCCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATATTCTTGGTCAAGTGTaGGAGTTCAGCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNILGQV*EFSSFF
Trigger: GAAGAAACTGCTGAACTCTCACACTTGACCAAGAAT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGGCATAACTAACATTTaGACCGAGACCAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNGITNI*TETRIK
Trigger: TTTAATTCTGGTCTCGGTGCAAATGTTAGTTATGCC...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATTTCTTCACTCTGCTTTaGGCTAGGTTCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNFFTLL*ARFIER
Trigger: TCTCTCAATGAACCTAGCCCAAAGCAGAGTGAAGAA...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CCA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAACATACAGACTTCATTaGGAGTTTCTCCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQTYRLH*EFLLVF
Trigger: AAAAACAAGGAGAAACTCCCAATGAAGTCTGTATGT...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATATATTGGAACATTCTTaGTCAAGTGTGAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNILEHS*SSVRVQ
Trigger: CTGAACTCTCACACTTGACCAAGAATGTTCCAATAT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCAGTGCAAACAAATATTaGAACATTCTTGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCSANKY*NILGQV
Trigger: CACTTGACCAAGAATGTTCCAATATTTGTTTGCACT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp ACTGTTTGGTTCCAGTCTGTATACTTCTTCGAATCATCAATCTGTATCTTGGCTGTATATGCTGTATCTTaGTCAACCGTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TVWFQSVYFFESSICILAVYAVS*STVLSK
Trigger: CTTTGAAAGAACGGTTGACCAAGATACAGCATATAC...AGCCAAGATACAGATTGATGATTCGAAGAAGTATACAGACTGGAACCAAACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGATCATTTCATGCCAATaGATAGACACTAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWIISCQ*IDTKIL
Trigger: CAAGATCTTAGTGTCTATCCATTGGCATGAAATGAT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CCA 90 bp ACTGTTTGGTTCCAGTCTGTATACTTCTTCGAATCATCAATCTGTATCTTGGCTACATACAGACTTCATTaGGAGTTTCTCCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TVWFQSVYFFESSICILATYRLH*EFLLVF
Trigger: AAAAACAAGGAGAAACTCCCAATGAAGTCTGTATGT...AGCCAAGATACAGATTGATGATTCGAAGAAGTATACAGACTGGAACCAAACAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATCATCAATCTGTATCTTaGCTCAAATACATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNHQSVS*LKYMER
Trigger: CCTCTCCATGTATTTGAGCCAAGATACAGATTGATG...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp TTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCATCATATATTTACATGCCAAACTGTTTaGTTCCAGTCTGTATACTTC +
Preference number: 4 (lower is better)
Translates to: LEHSWSSVRVQQFLHHIFTCQTV*FQSVYF
Trigger: GAAGTATACAGACTGGAACCAAACAGTTTGGCATGT...AAATATATGATGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR TCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATTATTTTGTGTATCACTaGCACACATGCCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNYFVYH*HTCQTV
Trigger: AACAGTTTGGCATGTGTGTCAGTGATACACAAAATA...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR GCA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATATTCAATGTCGGCAGTaGAATATCCATCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNIQCRQ*NIHLSF
Trigger: GAATGAAAGATGGATATTGCACTGCCGACATTGAAT...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CCA 90 bp CAAACAAATATTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCAACATACAGACTTCATTaGGAGTTTCTCCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QTNIGTFLVKCESSAVSSTYRLH*EFLLVF
Trigger: AAAAACAAGGAGAAACTCCCAATGAAGTCTGTATGT...TGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAATATTTGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS GCA 90 bp CCCAGCGCTCCGACTCCGCGGCCGCGCGCTCCAGCCGATGGCCGCTaGCGCCGCCCACTTCCCAGAACCGGCCTCGGCCCTGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PSAPTPRPRAPADGR*RRPLPRTGLGPAAL
Trigger: CAGCGCCGCAGGGCCGAGGCCGGTTCTGGGAAGTGGGCGGCGGCAGCGGCCATCGGCTGGAGCGCGCGGCCGCGGAGTCGGAGCGCTGGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS CCA 90 bp AGCAGCTCCCAGCGCTCCGACTCCGCGGCCGCGCGCTCCAGCCGATaGCCGCTGCCGCCGCCCACTTCCCAGAACCGGCCTCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SSSQRSDSAAARSSR*PLPPPTSQNRPRPC
Trigger: GCAGGGCCGAGGCCGGTTCTGGGAAGTGGGCGGCGGCAGCGGCCATCGGCTGGAGCGCGCGGCCGCGGAGTCGGAGCGCTGGGAGCTGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS GCA 90 bp CCAGGGCCTCCCGGTAGCGCCCCTGGTGCAGTAGCTCCCCGAGCCTaGCGGCCGCCCGGGCCCGCTCGCGCTGGCCCGGAAACCACTTCT +
Preference number: 5 (lower is better)
Translates to: PGPPGSAPGAVAPRA*RPPGPARAGPETTS
Trigger: AGAAGTGGTTTCCGGGCCAGCGCGAGCGGGCCCGGGCGGCCGGCAGGCTCGGGGAGCTACTGCACCAGGGGCGCTACCGGGAGGCCCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS GCA 90 bp CGATGGCCGCTGCCGCCGCCCACTTCCCAGAACCGGCCTCGGCCCTaGGGCGCTGGGGCCATCTCCCGACTCCCTCCTGGGGAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: RWPLPPPTSQNRPRP*GAGAISRLPPGEVL
Trigger: GAGGACCTCCCCAGGAGGGAGTCGGGAGATGGCCCCAGCGCCGCAGGGCCGAGGCCGGTTCTGGGAAGTGGGCGGCGGCAGCGGCCATCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS TCA 90 bp CAACCGGGGCCGCGCTCCAGCCCAGCCCGTGGCGGAGCCGGTAGTTaGACACCAGGCAGTCCACCAGGGCGCCCAGGCACTCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QPGPRSSPARGGAGS*TPGSPPGRPGTRAW
Trigger: CCAGGCCCGAGTGCCTGGGCGCCCTGGTGGACTGCCTGGTGTTCAACTACCGGCTCCGCCACGGGCTGGGCTGGAGCGCGGCCCCGGTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS TCA 90 bp CCACTTCTCGGCCAGGTGGTTGAGGACGACGCTGGTTCTGAAGTCTaGAGCGGCGATGGCGGCGGCCAGAGGCGGCGGCCGCGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: PLLGQVVEDDAGSEV*SGDGGGQRRRPRGG
Trigger: ACCGCCCCGCGGCCGCCGCCTCTGGCCGCCGCCATCGCCGCTTCAGACTTCAGAACCAGCGTCGTCCTCAACCACCTGGCCGAGAAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS CCA 90 bp GCCCGGGCCCGCTCGCGCTGGCCCGGAAACCACTTCTCGGCCAGGTaGTTGAGGACGACGCTGGTTCTGAAGTCTGAAGCGGCGATGGCG +
Preference number: 5 (lower is better)
Translates to: ARARSRWPGNHFSAR*LRTTLVLKSEAAMA
Trigger: CGCCATCGCCGCTTCAGACTTCAGAACCAGCGTCGTCCTCAACCACCTGGCCGAGAAGTGGTTTCCGGGCCAGCGCGAGCGGGCCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS TCA 90 bp TTCTGCCCTCCCGCGGTTCCCAATTGTCCCGGTGACTTTTGTGGGTaGGGAAGGGAGACGCCGCCTGCCCGGCCTAGTTGCCCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: FCPPAVPNCPGDFCG*GRETPPARPSCPRG
Trigger: CCCGCGAGGGCAACTAGGCCGGGCAGGCGGCGTCTCCCTTCCTCACCCACAAAAGTCACCGGGACAATTGGGAACCGCGGGAGGGCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTTTCTCGGCCAGGTGGTaGAGGACGACGCTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSFSARW*RTTLVL
Trigger: CAGAACCAGCGTCGTCCTCAACCACCTGGCCGAGAA...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS CCA 90 bp GTGTGGGCAGTTACTGCTGCCCAATACTTGGTTAGAAGCACCCCATaGCAGCTTCCCTATAATAGCGAGGAAATAAGCTGGGAGACAGCT +
Preference number: 5 (lower is better)
Translates to: VWAVTAAQYLVRSTP*QLPYNSEEISWETA
Trigger: AGCTGTCTCCCAGCTTATTTCCTCGCTATTATAGGGAAGCTGCCATGGGGTGCTTCTAACCAAGTATTGGGCAGCAGTAACTGCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534446.1
ENST00000645502.1
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTCTCGGCCAGGTGGTaGAGGACGACGCTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVFSARW*RTTLVL
Trigger: CAGAACCAGCGTCGTCCTCAACCACCTGGCCGAGAA...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAGGCCGAGGCTGCTTCTaGGAGACTAAGAAATGCACT +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLGRGCF*ETKKCT
Trigger: AGTGCATTTCTTAGTCTCCAAGAAGCAGCCTCGGCC...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CAA 90 bp GAGAACTGCAAGAAGCCACCAACACCATGCAGGTCCATTAGGGGCTGCCTGAAGGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: ENCKKPPTPCRSIRGCLKEMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...CTTCAGGCAGCCCCTAATGGACCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGGCCGAGGCTGCTTCTaGGAGACTAAGAAATGCACT +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKGRGCF*ETKKCT
Trigger: AGTGCATTTCTTAGTCTCCAAGAAGCAGCCTCGGCC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CAA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCCTGATAATTCTTTGTaGTGGGAATCCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CAKAADNLAINAARLGSLPDNSL*WESCCA
Trigger: GGCACAGCAGGATTCCCACAACAAAGAATTATCAGG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCGGTTTAAGCTTCCTTaGACAGGCTCTGAAGTGACC +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSRFKLP*TGSEVT
Trigger: GGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCGGTTTAAGCTTCCTTaGACAGGCTCTGAAGTGACC +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKRFKLP*TGSEVT
Trigger: GGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATGCAGGAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: LVSWVYRENCKKPPTPCRNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...CCTGCATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTAAACCAGCTGCAGGCTaGAGAGTAAACCAAATCATG +
Preference number: 5 (lower is better)
Translates to: CAKAADNLAINAARLGSLKPAAG*RVNQIM
Trigger: CATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTT...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp GACAGCTGGTATCGTGGGTCTACAGGGAGAACTGCAAGAAGCCACCAACACCATATGTCAGGTTTACAATaGTTCCTGAAAACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: DSWYRGSTGRTARSHQHHMSGLQ*FLKTGS
Trigger: AGAGCCAGTTTTCAGGAACAATTGTAAACCTGACAT...ATGGTGTTGGTGGCTTCTTGCAGTTCTCCCTGTAGACCCACGATACCAGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACCTGATAATTCTTTGTaGTGGGAATCCTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLPDNSL*WESCCA
Trigger: GGCACAGCAGGATTCCCACAACAAAGAATTATCAGG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS TCA 90 bp TCCTCTCTGGCAGGCATTTCTGTTGAATTTATAGACTGTGCTGACTaGGCACGGTTTAAGCTTCCTTTGACAGGCTCTGAAGTGACCTCT +
Preference number: 5 (lower is better)
Translates to: SSLAGISVEFIDCAD*ARFKLPLTGSEVTS
Trigger: AGAGGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCGTGCTCAGTCAGCACAGTCTATAAATTCAACAGAAATGCCTGCCAGAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000534446.1
ENST00000642519.1
ENST00000643654.1
ENST00000645502.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: CAKAADNLAINAARLGSLHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAACCAGCTGCAGGCTaGAGAGTAAACCAAATCATG +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLKPAAG*RVNQIM
Trigger: CATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: CAKAADNLAINAARLGSLLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAATATGACTAAGCACTaGGGACAAAAGATGACCCGA +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTNMTKH*GQKMTR
Trigger: TCGGGTCATCTTTTGTCCCAAGTGCTTAGTCATATT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CAA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGCGGTTTAAGCTTCCTTaGACAGGCTCTGAAGTGACC +
Preference number: 5 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVRFKLP*TGSEVT
Trigger: GGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCG...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTCATCAATCTGTATCTaGGCTCAAATACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTSSICI*AQIHGE
Trigger: CTCTCCATGTATTTGAGCCAAGATACAGATTGATGA...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTCATCAATCTGTATCTaGGCTCAAATACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: CAKAADNLAINAARLGSLSSICI*AQIHGE
Trigger: CTCTCCATGTATTTGAGCCAAGATACAGATTGATGA...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTAAACCAGCTGCAGGCTaGAGAGTAAACCAAATCATG +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSKPAAG*RVNQIM
Trigger: CATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: CAKAADNLAINAARLGSLEMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...AAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTEMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCCCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTACTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAATATGACTAAGCACTaGGGACAAAAGATGACCCGA +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLNMTKH*GQKMTR
Trigger: TCGGGTCATCTTTTGTCCCAAGTGCTTAGTCATATT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS-3UTR CAA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCCGGTTTAAGCTTCCTTaGACAGGCTCTGAAGTGACC +
Preference number: 5 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCRFKLP*TGSEVT
Trigger: GGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCG...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGTGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: MCKGSRQSGHQCSQIRVTNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...AGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATCCTCCCTCTCGGGCATaGATCCGAAATGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNPPSRA*IRNAEE
Trigger: TTCTTCAGCATTTCGGATCAATGCCCGAGAGGGAGG...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGTTTGTACTTGCAGCTTaGCAGGTGCAAAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKFVLAA*QVQNLH
Trigger: ATGAAGATTTTGCACCTGCAAAGCTGCAAGTACAAA...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATCGGTTTAAGCTTCCTTaGACAGGCTCTGAAGTGACC +
Preference number: 5 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNRFKLP*TGSEVT
Trigger: GGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCG...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AACAACCTCATGCAGAGAGAACACTCGAAATCTGAGACATCGATTAATTCTTCTCGGTTTAAGCTTCCTTaGACAGGCTCTGAAGTGACC +
Preference number: 5 (lower is better)
Translates to: NNLMQREHSKSETSINSSRFKLP*TGSEVT
Trigger: GGTCACTTCAGAGCCTGTCAAAGGAAGCTTAAACCG...AGAAGAATTAATCGATGTCTCAGATTTCGAGTGTTCTCTCTGCATGAGGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp TGCAAAGGCAGCAGACAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: CKGSRQSGHQCSQIRVTLNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...TAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTGTCTGCTGCCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTTCATCAATCTGTATCTaGGCTCAAATACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSSSICI*AQIHGE
Trigger: CTCTCCATGTATTTGAGCCAAGATACAGATTGATGA...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGAAACCAGCTGCAGGCTaGAGAGTAAACCAAATCATG +
Preference number: 5 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVKPAAG*RVNQIM
Trigger: CATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTT...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSEMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGGTTGAAGGTATTCATTaGCAGAACCACATGATTCAG +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKVEGIH*QNHMIQ
Trigger: CTGAATCATGTGGTTCTGCAAATGAATACCTTCAAC...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTATGTCAGGTTTACAATaGTTCCTGAAAACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSMSGLQ*FLKTGS
Trigger: AGAGCCAGTTTTCAGGAACAATTGTAAACCTGACAT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS GCA 90 bp AATACAATAGTCAGTAAGACTTCTGTGTCTAATCCCCCGTCCATATaGCATATGCCAACCGACACAAATGGAAAAAGGGATCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: NTIVSKTSVSNPPSI*HMPTDTNGKRDQKN
Trigger: GTTCTTCTGATCCCTTTTTCCATTTGTGTCGGTTGGCATATGGCATATGGACGGGGGATTAGACACAGAAGTCTTACTGACTATTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527055.1
ENST00000643781.1
CDS-3UTR CAA 90 bp CAATCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: QSGHQCSQIRVTLKGDPKNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...CTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TCTGGCCATCAATGCAGCCAGATTAGGGTCACTTTAAAGGGAGATCCAAAGAGTAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SGHQCSQIRVTLKGDPKSNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...ACTCTTTGGATCTCCCTTTAAAGTGACCCTAATCTGGCTGCATTGATGGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: MVHSATSQCRGSTHIQCVHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...CACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGAAACCAGCTGCAGGCTaGAGAGTAAACCAAATCATG +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWKPAAG*RVNQIM
Trigger: CATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCAAACCAGCTGCAGGCTaGAGAGTAAACCAAATCATG +
Preference number: 5 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCKPAAG*RVNQIM
Trigger: CATGATTTGGTTTACTCTCAAGCCTGCAGCTGGTTT...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAACACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGCCACATGCCAAACTGTTaGGTTCCAGTCTGTATACTT +
Preference number: 5 (lower is better)
Translates to: SMVHSATSQCRGSTHIQCHMPNC*VPVCIL
Trigger: AAGTATACAGACTGGAACCAAACAGTTTGGCATGTG...GCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp GCAGGCTTGAGAGTAAACCAAATCATGAAGCTCTCTGAGATTCTTAATCTCATCCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: AGLRVNQIMKLSEILNLILSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...GATGAGATTAAGAATCTCAGAGAGCTTCATGATTTGGTTTACTCTCAAGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGTCATCAATCTGTATCTaGGCTCAAATACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWSSICI*AQIHGE
Trigger: CTCTCCATGTATTTGAGCCAAGATACAGATTGATGA...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGGAAATGCTGAAGAATTaGGCTTCGAAATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWEMLKN*ASKSVS
Trigger: AGAGACAGATTTCGAAGCCAAATTCTTCAGCATTTC...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000525024.5
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000646126.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAACTTCACAATGTAGAGGTTCGACACACATTCAATGCGTGTTTTTCTGTGCAAATGTCAGGTTTACAATaGTTCCTGAAAACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: QLHNVEVRHTFNACFSVQMSGLQ*FLKTGS
Trigger: AGAGCCAGTTTTCAGGAACAATTGTAAACCTGACAT...TTGCACAGAAAAACACGCATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTTTGTACTTGCAGCTTaGCAGGTGCAAAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNFVLAA*QVQNLH
Trigger: ATGAAGATTTTGCACCTGCAAAGCTGCAAGTACAAA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp TTCATTAAATTTCTGAAACCAGCACTAGATGTGCAAAGGCAGCAGACAATCTGGAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: FIKFLKPALDVQRQQTIWNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...CCAGATTGTCTGCTGCCTTTGCACATCTAGTGCTGGTTTCAGAAATTTAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398246.8
ENST00000524526.2
ENST00000526680.5
ENST00000533751.5
ENST00000642519.1
ENST00000643654.1
ENST00000646033.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATTCATCAATCTGTATCTaGGCTCAAATACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNSSICI*AQIHGE
Trigger: CTCTCCATGTATTTGAGCCAAGATACAGATTGATGA...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATGTTGAAGGTATTCATTaGCAGAACCACATGATTCAG +
Preference number: 5 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNVEGIH*QNHMIQ
Trigger: CTGAATCATGTGGTTCTGCAAATGAATACCTTCAAC...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp ACTGTTTGGTTCCAGTCTGTATACTTCTTCGAATCATCAATCTGTATCTTGGCTGTTGAAGGTATTCATTaGCAGAACCACATGATTCAG +
Preference number: 5 (lower is better)
Translates to: TVWFQSVYFFESSICILAVEGIH*QNHMIQ
Trigger: CTGAATCATGTGGTTCTGCAAATGAATACCTTCAAC...AGCCAAGATACAGATTGATGATTCGAAGAAGTATACAGACTGGAACCAAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp AGAGTATGGTACATAGTGCAACTTCACAATGTAGAGGTTCGACACACATTCAATAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: RVWYIVQLHNVEVRHTFNNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...ATTGAATGTGTGTCGAACCTCTACATTGTGAAGTTGCACTATGTACCATACTCT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp AACAACCTCATGCAGAGAGAACACTCGAAATCTGAGACATCGATTAATTCTTCTAATATTGGAACATTCTaGGTCAAGTGTGAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: NNLMQREHSKSETSINSSNIGTF*VKCESS
Trigger: TGAACTCTCACACTTGACCAAGAATGTTCCAATATT...AGAAGAATTAATCGATGTCTCAGATTTCGAGTGTTCTCTCTGCATGAGGTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp CAAACAAATATTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCATCATCAATCTGTATCTaGGCTCAAATACATGGAGAG +
Preference number: 5 (lower is better)
Translates to: QTNIGTFLVKCESSAVSSSSICI*AQIHGE
Trigger: CTCTCCATGTATTTGAGCCAAGATACAGATTGATGA...TGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAATATTTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp AGGCAAATTCAATTTGCAAAAACTTGTATCGCTACTCTTGTAAACTTGGGCAATCTTTCAAAGACTTCATaGACAAAACCGACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RQIQFAKTCIATLVNLGNLSKTS*TKPTAG
Trigger: ACCAGCTGTCGGTTTTGTCAATGAAGTCTTTGAAAG...ATTGCCCAAGTTTACAAGAGTAGCGATACAAGTTTTTGCAAATTGAATTTGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398246.8
ENST00000526680.5
ENST00000643654.1
ENST00000647269.2
CDS-3UTR CAA 90 bp CAAACAAATATTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCAGTTGAAGGTATTCATTaGCAGAACCACATGATTCAG +
Preference number: 5 (lower is better)
Translates to: QTNIGTFLVKCESSAVSSVEGIH*QNHMIQ
Trigger: CTGAATCATGTGGTTCTGCAAATGAATACCTTCAAC...TGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAATATTTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS-3UTR CAA 90 bp TTGGAACATTCTTGGTCAAGTGTGAGAGTTCAGCAGTTTCTTCATCATATATTTTTTGTACTTGCAGCTTaGCAGGTGCAAAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: LEHSWSSVRVQQFLHHIFFVLAA*QVQNLH
Trigger: ATGAAGATTTTGCACCTGCAAAGCTGCAAGTACAAA...AAATATATGATGAAGAAACTGCTGAACTCTCACACTTGACCAAGAATGTTCCAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526680.5
ENST00000643654.1
CDS GCA 72 bp CCGACTCCGCGGCCGCGCGCTCCAGCCGATGGCCGCTaGCGCCGCCCACTTCCCAGAACCGGCCTCGGCCCT +
Preference number: 6 (lower is better)
Translates to: PTPRPRAPADGR*RRPLPRTGLGP
Trigger: AGGGCCGAGGCCGGTTCTGGGAAGTGGGCGGCGGCAGCGGCCATCGGCTGGAGCGCGCGGCCGCGGAGTCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS CCA 72 bp GCGGGGCGGTCCCTTCAGCATCAGTGGCACTGGCGGTaGCGGGCGGCAGCCGGTCCCGGCAGAGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: AGRSLQHQWHWR*RAAAGPGRGGS
Trigger: GCTGCCGCCTCTGCCGGGACCGGCTGCCGCCCGCCACCGCCAGTGCCACTGATGCTGAAGGGACCGCCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS CCA 72 bp GCCCTGCGGCGCTGGGGCCATCTCCCGACTCCCTCCTaGGGAGGTCCTCGCCACCGCCGGAGAGGACATGGC +
Preference number: 6 (lower is better)
Translates to: ALRRWGHLPTPS*GGPRHRRRGHG
Trigger: GCCATGTCCTCTCCGGCGGTGGCGAGGACCTCCCCAGGAGGGAGTCGGGAGATGGCCCCAGCGCCGCAGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS TCA 72 bp CCGCGCTCCAGCCCAGCCCGTGGCGGAGCCGGTAGTTaGACACCAGGCAGTCCACCAGGGCGCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: PRSSPARGGAGS*TPGSPPGRPGT
Trigger: AGTGCCTGGGCGCCCTGGTGGACTGCCTGGTGTTCAACTACCGGCTCCGCCACGGGCTGGGCTGGAGCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS CAA 90 bp CGGGCCCGCTCGCGCTGGCCCGGAAACCACTTCTCGGCCAGGTGGTaGAGGACGACGCTGGTTCTGAAGTCTGAAGCGGCGATGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RARSRWPGNHFSARW*RTTLVLKSEAAMAA
Trigger: CGCCGCCATCGCCGCTTCAGACTTCAGAACCAGCGTCGTCCTCAACCACCTGGCCGAGAAGTGGTTTCCGGGCCAGCGCGAGCGGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398246.8
ENST00000647269.2
CDS TCA 72 bp CCCGCGGTTCCCAATTGTCCCGGTGACTTTTGTGGGTaGGGAAGGGAGACGCCGCCTGCCCGGCCTAGTTGC +
Preference number: 6 (lower is better)
Translates to: PAVPNCPGDFCG*GRETPPARPSC
Trigger: GCAACTAGGCCGGGCAGGCGGCGTCTCCCTTCCTCACCCACAAAAGTCACCGGGACAATTGGGAACCGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS CCA 72 bp CACAGGCTCTGCATCCGTGGGTTCATCCAACTGCTTTaGGCTAGGTTCATTGAGAGACTGAGACTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: HRLCIRGFIQLL*ARFIERLRLFH
Trigger: ATGGAAGAGTCTCAGTCTCTCAATGAACCTAGCCCAAAGCAGTTGGATGAACCCACGGATGCAGAGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526680.5
ENST00000534446.1
ENST00000643654.1
ENST00000645502.1
CDS CCA 72 bp GTTACTGCTGCCCAATACTTGGTTAGAAGCACCCCATaGCAGCTTCCCTATAATAGCGAGGAAATAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VTAAQYLVRSTP*QLPYNSEEISW
Trigger: CCAGCTTATTTCCTCGCTATTATAGGGAAGCTGCCATGGGGTGCTTCTAACCAAGTATTGGGCAGCAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534446.1
ENST00000645502.1
CDS GCA 72 bp AGACTTCTGTGTCTAATCCCCCGTCCATATGCCATATaGCAACCGACACAAATGGAAAAAGGGATCAGAAGA +
Preference number: 6 (lower is better)
Translates to: RLLCLIPRPYAI*QPTQMEKGIRR
Trigger: TCTTCTGATCCCTTTTTCCATTTGTGTCGGTTGGCATATGGCATATGGACGGGGGATTAGACACAGAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527055.1
ENST00000643781.1
CDS GCA 72 bp GTCAGTAAGACTTCTGTGTCTAATCCCCCGTCCATATaGCATATGCCAACCGACACAAATGGAAAAAGGGAT +
Preference number: 6 (lower is better)
Translates to: VSKTSVSNPPSI*HMPTDTNGKRD
Trigger: ATCCCTTTTTCCATTTGTGTCGGTTGGCATATGGCATATGGACGGGGGATTAGACACAGAAGTCTTACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527055.1
ENST00000643781.1
CDS CCA 72 bp ACTAGATGTCGGTACCAGCACCACCCCCACAAGAGGTaGCAACCAAAAATCTCTCCAGATATTGTTCTAAAT +
Preference number: 6 (lower is better)
Translates to: TRCRYQHHPHKR*QPKISPDIVLN
Trigger: ATTTAGAACAATATCTGGAGAGATTTTTGGTTGCCACCTCTTGTGGGGGTGGTGCTGGTACCGACATCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS CAA 72 bp ATAAAATCTGTGTGGGCAGTTACTGCTGCCCAATACTaGGTTAGAAGCACCCCATGGCAGCTTCCCTATAAT +
Preference number: 6 (lower is better)
Translates to: IKSVWAVTAAQY*VRSTPWQLPYN
Trigger: ATTATAGGGAAGCTGCCATGGGGTGCTTCTAACCAAGTATTGGGCAGCAGTAACTGCCCACACAGATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534446.1
ENST00000645502.1
CDS CAA 90 bp ATAAATCACATAAAATCTGTGTGGGCAGTTACTGCTGCCCAATACTaGGTTAGAAGCACCCCATGGCAGCTTCCCTATAATAGCGAGGAA +
Preference number: 6 (lower is better)
Translates to: INHIKSVWAVTAAQY*VRSTPWQLPYNSEE
Trigger: TTCCTCGCTATTATAGGGAAGCTGCCATGGGGTGCTTCTAACCAAGTATTGGGCAGCAGTAACTGCCCACACAGATTTTATGTGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534446.1
ENST00000645502.1
CDS CCA 72 bp AATACGCGTAACACAAGGTTTATCAACAGTGGCACTTaGGGCCTGATAATTCTTTGTTGTGGGAATCCTGCT +
Preference number: 6 (lower is better)
Translates to: NTRNTRFINSGT*GLIILCCGNPA
Trigger: AGCAGGATTCCCACAACAAAGAATTATCAGGCCCCAAGTGCCACTGTTGATAAACCTTGTGTTACGCGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS CCA 72 bp ACAATCAAGTCACTGGGTTCATGGTCAGTTACTAGGTaGTCTGTACAACTGAGTCCAGTTTCTCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: TIKSLGSWSVTR*SVQLSPVSLLF
Trigger: AAAGAGAAGAGAAACTGGACTCAGTTGTACAGACCACCTAGTAACTGACCATGAACCCAGTGACTTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533751.5
ENST00000642519.1
CDS TCA 72 bp TTCTATGGCTGCTTTAAACTCTTGGAGACCAGCATATaGTTCCGCTCTGTAAATTTTTACAATCAAGTCACT +
Preference number: 6 (lower is better)
Translates to: FYGCFKLLETSI*FRSVNFYNQVT
Trigger: AGTGACTTGATTGTAAAAATTTACAGAGCGGAATCATATGCTGGTCTCCAAGAGTTTAAAGCAGCCATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000398246.8
ENST00000530693.1
ENST00000533751.5
ENST00000642519.1
ENST00000643566.1
ENST00000647269.2