RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LNX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072201

Ensembl transcript IDs: ENST00000263925.8, ENST00000306888.6, ENST00000504299.5, ENST00000504605.1, ENST00000507168.5, ENST00000510143.1, ENST00000511398.1, ENST00000512247.5, ENST00000513421.5

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATTTAAATCGCCTCATGACCATGTCTGTGAGCCAGGGTCAAGCTaGTTTGGCCTTCTTGATGCATTTTCCAAGGCCCACTGGTGGAGC +
Preference number: 1 (lower is better)
Translates to: KFKSPHDHVCEPGSS*FGLLDAFSKAHWWS
Trigger: GCTCCACCAGTGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGCTTGACCCTGGCTCACAGACATGGTCATGAGGCGATTTAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR CCA 90 bp GGGTCAAGCTGGTTTGGCCTTCTTGATGCATTTTCCAAGGCCCACTaGTGGAGCAGCATGAGTTTTTATACAGTTACTAACGATTGTGGA +
Preference number: 1 (lower is better)
Translates to: GSSWFGLLDAFSKAH*WSSMSFYTVTNDCG
Trigger: TCCACAATCGTTAGTAACTGTATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGCTTGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR CCA 90 bp TCAAGCTGGTTTGGCCTTCTTGATGCATTTTCCAAGGCCCACTGGTaGAGCAGCATGAGTTTTTATACAGTTACTAACGATTGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: SSWFGLLDAFSKAHW*SSMSFYTVTNDCGK
Trigger: TTTTCCACAATCGTTAGTAACTGTATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATGCCATAATGTACCCTTaGCAGACTTCAGCATATACC +
Preference number: 2 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNAIMYP*QTSAYT
Trigger: GGTATATGCTGAAGTCTGCCAAGGGTACATTATGGC...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCATACACAGATTATCTaGGAAAAGGTCAAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNHTQII*EKVKGS
Trigger: GGAACCCTTGACCTTTTCTCAGATAATCTGTGTATG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR CAA 90 bp TTAAATCGCCTCATGACCATGTCTGTGAGCCAGGGTCAAGCTGGTTaGGCCTTCTTGATGCATTTTCCAAGGCCCACTGGTGGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LNRLMTMSVSQGQAG*AFLMHFPRPTGGAA
Trigger: TGCTGCTCCACCAGTGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGCTTGACCCTGGCTCACAGACATGGTCATGAGGCGATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATTGGAATCATATTTTCTaGGGTGTAACTGGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNWNHIF*GVTGFH
Trigger: ATGAAAGCCAGTTACACCTCAGAAAATATGATTCCA...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGAGCCAGGGTCAAGCTaGTTTGGCCTTCTTGATGCA +
Preference number: 2 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCEPGSS*FGLLDA
Trigger: TGCATCAAGAAGGCCAAACCAGCTTGACCCTGGCTC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATACACACTCTTCATTGTaGCACAAATTTAAATCGCCT +
Preference number: 2 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNTHSSL*HKFKSP
Trigger: AGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGT...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTAATTTGGGTTCCTGGTaGAACCAAATGGGGTACACT +
Preference number: 2 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCNLGSW*NQMGYT
Trigger: AGTGTACCCCATTTGGTTTCACCAGGAACCCAAATT...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCATACACAGATTATCTaGGAAAAGGTCAAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCHTQII*EKVKGS
Trigger: GGAACCCTTGACCTTTTCTCAGATAATCTGTGTATG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACGCCATAATGTACCCTTaGCAGACTTCAGCATATACC +
Preference number: 2 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHAIMYP*QTSAYT
Trigger: GGTATATGCTGAAGTCTGCCAAGGGTACATTATGGC...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACTGGTTTGGCCTTCTTaGTGCATTTTCCAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKLVWPS*CIFQGP
Trigger: TGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCTGGTGAAACCAAATaGGGTACACTTTCATATCCA +
Preference number: 2 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGPGETK*GTLSYP
Trigger: TGGATATGAAAGTGTACCCCATTTGGTTTCACCAGG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTCCAAGGCCCACTGGTaGAGCAGCATGAGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTSKAHW*SSMSFY
Trigger: ATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCTCCAAGGCCCACTGGTaGAGCAGCATGAGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHISKAHW*SSMSFY
Trigger: ATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGA...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTAATTTGGGTTCCTGGTaGAACCAAATGGGGTACACT +
Preference number: 2 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTNLGSW*NQMGYT
Trigger: AGTGTACCCCATTTGGTTTCACCAGGAACCCAAATT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR CAA 90 bp AGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTaGTGTATATTAGTACCAGAAGTAGATACTATAAATCTTGTTATT +
Preference number: 2 (lower is better)
Translates to: RAPKLHLQNRHGFGL*CILVPEVDTINLVI
Trigger: AATAACAAGATTTATAGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR TCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCTGGAATCATATTTTCTaGGGTGTAACTGGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIWNHIF*GVTGFH
Trigger: ATGAAAGCCAGTTACACCTCAGAAAATATGATTCCA...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTACACACTCTTCATTGTaGCACAAATTTAAATCGCCT +
Preference number: 2 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTTHSSL*HKFKSP
Trigger: AGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CAA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACGCTGGTTTGGCCTTCTaGATGCATTTTCCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHAGLAF*MHFPRP
Trigger: GGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGC...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CAA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACCAGGGTCAAGCTGGTTaGGCCTTCTTGATGCATTTT +
Preference number: 3 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHQGQAG*AFLMHF
Trigger: AAAATGCATCAAGAAGGCCAAACCAGCTTGACCCTG...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR CCA 72 bp TGGTTTGGCCTTCTTGATGCATTTTCCAAGGCCCACTaGTGGAGCAGCATGAGTTTTTATACAGTTACTAAC +
Preference number: 3 (lower is better)
Translates to: WFGLLDAFSKAH*WSSMSFYTVTN
Trigger: GTTAGTAACTGTATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CAA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCGCTGGTTTGGCCTTCTaGATGCATTTTCCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIAGLAF*MHFPRP
Trigger: GGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGC...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR CCA 72 bp TTTGGCCTTCTTGATGCATTTTCCAAGGCCCACTGGTaGAGCAGCATGAGTTTTTATACAGTTACTAACGAT +
Preference number: 3 (lower is better)
Translates to: FGLLDAFSKAHW*SSMSFYTVTND
Trigger: ATCGTTAGTAACTGTATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGAAAATGCATCAAGAAGGCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
3UTR-3UTR CAA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCCAGGGTCAAGCTGGTTaGGCCTTCTTGATGCATTTT +
Preference number: 3 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIQGQAG*AFLMHF
Trigger: AAAATGCATCAAGAAGGCCAAACCAGCTTGACCCTG...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATTTCCAGCCGGCTTCCTaGAAGATGTCAGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNFQPAS*KMSGLR
Trigger: GCGGAGCCCTGACATCTTTCAGGAAGCCGGCTGGAA...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCCTGGTCGGCATGGTTaGCAACTGCACTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNPGRHG*QLHSRS
Trigger: AGAGCGGGAGTGCAGTTGCCAACCATGCCGACCAGG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATGTAGCCGGCCGTCTCTaGCGATCACCCCATCACGAT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNVAGRL*RSPHHD
Trigger: ATCGTGATGGGGTGATCGCCAGAGACGGCCGGCTAC...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATGGCATGGTTGGCAACTaGACTCCCGCTCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNGMVGN*TPALCP
Trigger: AGGACAAAGAGCGGGAGTGCAGTTGCCAACCATGCC...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATAGCTCTCATTCCTTGTaGGTGAACCGAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNSSHSL*VNRAAP
Trigger: AGGAGCTGCTCGGTTCACCCACAAGGAATGAGAGCT...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATTTTCAGAATTTTCCCTaGCCTGGTCGGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNFQNFP*PGRHGW
Trigger: CCAACCATGCCGACCAGGGCAGGGAAAATTCTGAAA...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTATGTCAGGGCTCCGCTaGCGAACCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCMSGLR*RTWRDT
Trigger: CGTGTCCCGCCAGGTTCGGCAGCGGAGCCCTGACAT...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGGGCTTGGGAGTGTTaGTCCTCTCCCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGAWEC*SSPLAL
Trigger: CAGGGCCAGGGGAGAGGAGCAACACTCCCAAGCCCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCAGGTGGTACAACCTTaGAAAGACTTCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNQVVQP*KDFRGS
Trigger: ACTGCCCCTGAAGTCTTTCCAAGGTTGTACCACCTG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATACTCTGGCTGGTTCATaGTGGATTGGAGAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNTLAGS*WIGEQY
Trigger: ATACTGCTCTCCAATCCATCATGAACCAGCCAGAGT...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCATAACCTCCTACAATaGAGAAGCCCAGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNHNLLQ*RSPDFQ
Trigger: CTGGAAGTCTGGGCTTCTGCATTGTAGGAGGTTATG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCACCGAAGCTACACCTaGAGAATAGGCATGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNHRSYT*RIGMVL
Trigger: CAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCTGCCCTGGTCGGCATaGTTGGCAACTGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCLPWSA*LATALP
Trigger: CGGGAGTGCAGTTGCCAACCATGCCGACCAGGGCAG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCAAGTAATTGTAGGATaGAGGGGCTTGGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNQVIVG*RGLGVL
Trigger: CAACACTCCCAAGCCCCTCCATCCTACAATTACTTG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGAGTCCAGGGCTGCTaGGCTGCTGCAGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGVQGC*AAAVFL
Trigger: CAGGAAGACTGCAGCAGCCCAGCAGCCCTGGACTCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCCACCAGGAAGTTGGTaGGGCAGAGGGTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCPPGSW*GRGCSR
Trigger: CCTACTGCACCCTCTGCCTCACCAACTTCCTGGTGG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGGTGCAGTGCTCCCTaGATGGGCAGGTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGCSAP*MGRSPV
Trigger: TACTGGTGACCTGCCCATTCAGGGAGCACTGCACCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR TCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATAATTTGGGTTCCTGGTaGAACCAAATGGGGTACACT +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNNLGSW*NQMGYT
Trigger: AGTGTACCCCATTTGGTTTCACCAGGAACCCAAATT...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACTGGCTGCCCGTCCTCTaGCGAGGACACGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHWLPVL*RGHVGR
Trigger: CCTGCCTACGTGTCCTCGGCAGAGGACGGGCAGCCA...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTAGCACCTGGCAGGGCTaGCGCAGGAGACGCACAGCG +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSSTWQG*RRRRTA
Trigger: CGCTGTGCGTCTCCTGCGGCAGCCCTGCCAGGTGCT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCCACATGACCCAGGATaGGGACCAGTCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCPHDPG*GPVTGW
Trigger: CCACCCAGTGACTGGTCCCCATCCTGGGTCATGTGG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCTCATTCCTTGTGGGTaGACCGAGCAGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCLIPCG*TEQLLG
Trigger: CCCAAGGAGCTGCTCGGTTCACCCACAAGGAATGAG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTTGGCTGCCCGTCCTCTaGCGAGGACACGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSWLPVL*RGHVGR
Trigger: CCTGCCTACGTGTCCTCGGCAGAGGACGGGCAGCCA...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTATGTCAGGGCTCCGCTaGCGAACCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSMSGLR*RTWRDT
Trigger: CGTGTCCCGCCAGGTTCGGCAGCGGAGCCCTGACAT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTGGGGCTTGGGAGTGTTaGTCCTCTCCCCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSGAWEC*SSPLAL
Trigger: CAGGGCCAGGGGAGAGGAGCAACACTCCCAAGCCCC...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCCTCTCCCCTGGCCCTaGGGACCAGCTGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSPLPWP*GPAAIA
Trigger: AGCAATGGCAGCTGGTCCCCAGGGCCAGGGGAGAGG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGACCAGTCACTGGGTaGGGCCATGTTGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGPVTG*GHVVVG
Trigger: TCCAACCACAACATGGCCCCACCCAGTGACTGGTCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCCTGCCTCACTCCGGCTaGCCTCTGTCAGTTCGACCC +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLLPHSG*PLSVRP
Trigger: GGGTCGAACTGACAGAGGTCAGCCGGAGTGAGGCAG...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACGGGACCAGCTGCCATTaGTGTTCCAGCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHGTSCH*CSSRLP
Trigger: AGGAAGCCGGCTGGAACAGCAATGGCAGCTGGTCCC...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCGGGCCATGTTGTGGTTaGAGTCCAGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLGPCCG*SPGLLG
Trigger: GCCCAGCAGCCCTGGACTCCAACCACAACATGGCCC...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCGGGACACGACGAGGTaGACACGTCTTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSRDTTR*TRLSLA
Trigger: GGCCAGTGAAAGACGTGTTCACCTCGTCGTGTCCCG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCTTCCAGCCGGCTTCCTaGAAGATGTCAGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLFQPAS*KMSGLR
Trigger: GCGGAGCCCTGACATCTTTCAGGAAGCCGGCTGGAA...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTTTCCATCTCTGCTTATaGCTCCTCCGGGCTCAACAC +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCFHLCL*LLRAQH
Trigger: GTGTTGAGCCCGGAGGAGTCATAAGCAGAGATGGAA...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATATGTACTTCTACCATTaGCAGCAAGAAGAATATCAC +
Preference number: 4 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNMYFYH*QQEEYH
Trigger: GTGATATTCTTCTTGCTGTCAATGGTAGAAGTACAT...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGATGCTGGACTTCTTaGAGTGCTGCAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGCWTS*SAAEPE
Trigger: CTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCCCTGCGACGGTCATaGCGAGAGATTCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGPLRRS*REIHRG
Trigger: ACCCCGGTGAATCTCTCGGCATGACCGTCGCAGGGG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCGTTGGAGTCCAGGGCTaGTGGGCTGCTGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLVGVQG*WAAAVF
Trigger: GAAGACTGCAGCAGCCCAGCAGCCCTGGACTCCAAC...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACCTTCAAGCGACTGTCTaGGGCTCTCCAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHLQATV*GSPSSS
Trigger: GCTGCTGCTTGGAGAGCCCCAGACAGTCGCTTGAAG...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCCTGGTCGGCATGGTTaGCAACTGCACTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSPGRHG*QLHSRS
Trigger: AGAGCGGGAGTGCAGTTGCCAACCATGCCGACCAGG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGGGCCATGTTGTGGTTaGAGTCCAGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGGPCCG*SPGLLG
Trigger: GCCCAGCAGCCCTGGACTCCAACCACAACATGGCCC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCGGGACACGACGAGGTaGACACGTCTTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGRDTTR*TRLSLA
Trigger: GGCCAGTGAAAGACGTGTTCACCTCGTCGTGTCCCG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTAACACCTGGGTGCAGTaGTCCCTGAATGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSNTWVQ*SLNGQV
Trigger: GACCTGCCCATTCAGGGAGCACTGCACCCAGGTGTT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCAGCACCTGGCAGGGCTaGCGCAGGAGACGCACAGCG +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHISTWQG*RRRRTA
Trigger: CGCTGTGCGTCTCCTGCGGCAGCCCTGCCAGGTGCT...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCCTGTCCATTGTTCCTaGTGCGGAACTTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCPVHCS*CGTSVH
Trigger: GTGAACAGAAGTTCCGCAGCAGGAACAATGGACAGG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACCTGACCATGTCGATATaGCACACCGCCATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHLTMSI*HTAIQH
Trigger: GTGCTGGATGGCGGTGTGGCATATCGACATGGTCAG...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTTCCAAGGAGTGGGCTTaGCCACACACTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSSKEWA*PHTAHR
Trigger: CCTGTGTGCAGTGTGTGGCCAAGCCCACTCCTTGGA...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCAGCGCTGCAACACCTaGGTGCAGTGCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSQRCNT*VQCSLN
Trigger: ATTCAGGGAGCACTGCACCCAGGTGTTGCAGCGCTG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCAGGTGGTACAACCTTaGAAAGACTTCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCQVVQP*KDFRGS
Trigger: ACTGCCCCTGAAGTCTTTCCAAGGTTGTACCACCTG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTATGAGCCGCACTTTCTaGGCTGCCATATCGAAGATC +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCMSRTF*AAISKI
Trigger: GATCTTCGATATGGCAGCCCAGAAAGTGCGGCTCAT...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACCTCTCCCCTGGCCCTaGGGACCAGCTGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKPLPWP*GPAAIA
Trigger: AGCAATGGCAGCTGGTCCCCAGGGCCAGGGGAGAGG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCTGCTGCAGTCTTCCTaGGGCTCATACTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCLLQSS*GSYSLT
Trigger: AGTCAAAGAGTATGAGCCCCAGGAAGACTGCAGCAG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTATGGGGACCAGTCACTaGGTGGGGCCATGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSMGTSH*VGPCCG
Trigger: ACCACAACATGGCCCCACCCAGTGACTGGTCCCCAT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGGCTTGGCCACACACTaGACACAGGGGTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGGLATH*TQGFRI
Trigger: GATCCTGAACCCCTGTGTGCAGTGTGTGGCCAAGCC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCTGACCATGTCGATATaGCACACCGCCATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSLTMSI*HTAIQH
Trigger: GTGCTGGATGGCGGTGTGGCATATCGACATGGTCAG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGCCCTGGGGACCAGCTaGCATTGCTGTTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTALGTS*HCCSSR
Trigger: CCGGCTGGAACAGCAATGGCAGCTGGTCCCCAGGGC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCGCCCTGGGGACCAGCTaGCATTGCTGTTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIALGTS*HCCSSR
Trigger: CCGGCTGGAACAGCAATGGCAGCTGGTCCCCAGGGC...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCCTTTAAGCAAACCTTaGCATGCCCCCACAATCAGT +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCPLSKP*HAPTIS
Trigger: ACTGATTGTGGGGGCATGGCAAGGTTTGCTTAAAGG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCGGGGTTCAGGATCGTTaGCAGACTCTGGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLGVQDR*QTLAGS
Trigger: TGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCC...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSASSYL*SGRSGR
Trigger: CCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGC...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACGAGCCAGGGTCAAGCTaGTTTGGCCTTCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHEPGSS*FGLLDA
Trigger: TGCATCAAGAAGGCCAAACCAGCTTGACCCTGGCTC...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGACTTCTTGCAGTGCTaGAGAACCAGAGGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGDFLQC*RTRGLR
Trigger: CCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACGTCCATTGTTCCTGCTaGGGAACTTCTGTTCACGCA +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHVHCSC*GTSVHA
Trigger: TGCGTGAACAGAAGTTCCGCAGCAGGAACAATGGAC...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAGGGACCAGCTGCCATTaGTGTTCCAGCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKGTSCH*CSSRLP
Trigger: AGGAAGCCGGCTGGAACAGCAATGGCAGCTGGTCCC...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGAGGCTTGCGGTCCATaGGACAGAAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGEACGP*DRSPSP
Trigger: TGGAGAAGGACTTCTGTCCCATGGACCGCAAGCCTC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCCTGCCCTGGTCGGCATaGTTGGCAACTGCACTCCCG +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHILPWSA*LATALP
Trigger: CGGGAGTGCAGTTGCCAACCATGCCGACCAGGGCAG...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCGAATTTTCCCTGCCCTaGTCGGCATGGTTGGCAACT +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLEFSLP*SAWLAT
Trigger: AGTTGCCAACCATGCCGACCAGGGCAGGGAAAATTC...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACCTGCTGCAGTCTTCCTaGGGCTCATACTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHLLQSS*GSYSLT
Trigger: AGTCAAAGAGTATGAGCCCCAGGAAGACTGCAGCAG...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCGGAGTCCAGGGCTGCTaGGCTGCTGCAGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIGVQGC*AAAVFL
Trigger: CAGGAAGACTGCAGCAGCCCAGCAGCCCTGGACTCC...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACCACATGACCCAGGATaGGGACCAGTCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKPHDPG*GPVTGW
Trigger: CCACCCAGTGACTGGTCCCCATCCTGGGTCATGTGG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTTGGACAGCCATCTTGTaGGCGCCTCTTCCTATCTTT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSWTAIL*APLPIF
Trigger: AAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCA...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGTTCCATCTCTGCTTATaGCTCCTCCGGGCTCAACAC +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGFHLCL*LLRAQH
Trigger: GTGTTGAGCCCGGAGGAGTCATAAGCAGAGATGGAA...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGTTGGAGTCCAGGGCTaGTGGGCTGCTGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTVGVQG*WAAAVF
Trigger: GAAGACTGCAGCAGCCCAGCAGCCCTGGACTCCAAC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACCATAACCTCCTACAATaGAGAAGCCCAGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHHNLLQ*RSPDFQ
Trigger: CTGGAAGTCTGGGCTTCTGCATTGTAGGAGGTTATG...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACCACCGAAGCTACACCTaGAGAATAGGCATGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHHRSYT*RIGMVL
Trigger: CAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTG...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCAATGATATGGACCAGTaGGGTTTCGCTACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLNDMDQ*GFATSH
Trigger: GTGGGAGGTAGCGAAACCCCACTGGTCCATATCATT...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTTTTACCACCTTCTCATaGCAAGTAATTGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCFTTFS*QVIVGW
Trigger: CCATCCTACAATTACTTGTCATGAGAAGGTGGTAAA...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCTGGTTTGGCCTTCTTaGTGCATTTTCCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGLVWPS*CIFQGP
Trigger: TGGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGTTTCAGAATTTTCCCTaGCCTGGTCGGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGFQNFP*PGRHGW
Trigger: CCAACCATGCCGACCAGGGCAGGGAAAATTCTGAAA...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGTCCATTGTTCCTGCTaGGGAACTTCTGTTCACGCA +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGVHCSC*GTSVHA
Trigger: TGCGTGAACAGAAGTTCCGCAGCAGGAACAATGGAC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTATTCTCCGAGCAGTGTaGTGCCTTCTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTILRAV*CLLPGH
Trigger: GTGGCCAGGGAGAAGGCAGCACACTGCTCGGAGAAT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR GCA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACTCTGAATACAGGAAGTaGAGGTTGCCCACATTGTCA +
Preference number: 4 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHSEYRK*RLPTLS
Trigger: TGACAATGTGGGCAACCTGCACTTCCTGTATTCAGA...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCATCGTTGGCAGACTCTaGCTGGTTCATGATGGATTG +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLIVGRL*LVHDGL
Trigger: CAATCCATCATGAACCAGCCAGAGTCTGCCAACGAT...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAGCCTGCAGGCAGATGTaGCAGATGAGGTCATCATCC +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKACRQM*QMRSSS
Trigger: GGATGATGACCTCATCTGCCACATCTGCCTGCAGGC...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGATGAGCCGCACTTTCTaGGCTGCCATATCGAAGATC +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGMSRTF*AAISKI
Trigger: GATCTTCGATATGGCAGCCCAGAAAGTGCGGCTCAT...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGAACACGTCTTTCACTaGCCTGAATCAGATGAGCCG +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGEHVFH*PESDEP
Trigger: CGGCTCATCTGATTCAGGCCAGTGAAAGACGTGTTC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGGACCAGTCACTGGGTaGGGCCATGTTGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTGPVTG*GHVVVG
Trigger: TCCAACCACAACATGGCCCCACCCAGTGACTGGTCC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTATGGGGACCAGTCACTaGGTGGGGCCATGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTMGTSH*VGPCCG
Trigger: ACCACAACATGGCCCCACCCAGTGACTGGTCCCCAT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTTCCATCATTGTATGCTaGTGTTCCTTCAACAATGGA +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCSIIVC*CSFNNG
Trigger: TCCATTGTTGAAGGAACACCAGCATACAATGATGGA...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCTCCAAGGCCCACTGGTaGAGCAGCATGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLSKAHW*SSMSFY
Trigger: ATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGA...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCATCCCATTCTCTATGTaGTGCTCCCCCTGCGACGGT +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIIPFSM*CSPCDG
Trigger: ACCGTCGCAGGGGGAGCATCACATAGAGAATGGGAT...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGCAGAACCAGAGGCTTaGGGTCCATGGGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTAEPEA*GPWDRS
Trigger: ACTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR GCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACTGGACTTCTTGCAGTaGTGCAGAACCAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKLDFLQ*CRTRGL
Trigger: CAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIASSYL*SGRSGR
Trigger: CCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGC...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGTCCAAGGCCCACTGGTaGAGCAGCATGAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGSKAHW*SSMSFY
Trigger: ATAAAAACTCATGCTGCTCCACCAGTGGGCCTTGGA...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAGAGCCAGGGTCAAGCTaGTTTGGCCTTCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKEPGSS*FGLLDA
Trigger: TGCATCAAGAAGGCCAAACCAGCTTGACCCTGGCTC...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTACACACTCTTCATTGTaGCACAAATTTAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCTHSSL*HKFKSP
Trigger: AGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGT...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACCTGTCCATTGTTCCTaGTGCGGAACTTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKPVHCS*CGTSVH
Trigger: GTGAACAGAAGTTCCGCAGCAGGAACAATGGACAGG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTTTTCCTCCAAGGAGTaGGCTTGGCCACACACTGCA +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTFSSKE*AWPHTA
Trigger: TGCAGTGTGTGGCCAAGCCCACTCCTTGGAGGAAAA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTATCATCCACTTCCTCTaGATAGCTGTAGAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSIIHFL*IAVEVV
Trigger: AACCACTTCTACAGCTATCCAGAGGAAGTGGATGAT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGAATTTTCCCTGCCCTaGTCGGCATGGTTGGCAACT +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTEFSLP*SAWLAT
Trigger: AGTTGCCAACCATGCCGACCAGGGCAGGGAAAATTC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAAATGATATGGACCAGTaGGGTTTCGCTACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKNDMDQ*GFATSH
Trigger: GTGGGAGGTAGCGAAACCCCACTGGTCCATATCATT...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAGAACACGTCTTTCACTaGCCTGAATCAGATGAGCCG +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKEHVFH*PESDEP
Trigger: CGGCTCATCTGATTCAGGCCAGTGAAAGACGTGTTC...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTTCACCGGGGTCTTTTTaGATATTTACCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSSPGSF*IFTTFS
Trigger: TGAGAAGGTGGTAAATATCCAAAAAGACCCCGGTGA...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCCTGGTGAAACCAAATaGGGTACACTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSPGETK*GTLSYP
Trigger: TGGATATGAAAGTGTACCCCATTTGGTTTCACCAGG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCATACACAGATTATCTaGGAAAAGGTCAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGHTQII*EKVKGS
Trigger: GGAACCCTTGACCTTTTCTCAGATAATCTGTGTATG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTTCTTCCATCATTGTATaGTGGTGTTCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSSSIIV*WCSFNN
Trigger: ATTGTTGAAGGAACACCAGCATACAATGATGGAAGA...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGTTCTTTCAGCAGTCTTaGCAAGCAAGCATGTATCAT +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGFFQQS*QASMYH
Trigger: ATGATACATGCTTGCTTGGCAAGACTGCTGAAAGAA...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTTGGCAGACTCTGGCTaGTTCATGATGGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTLADSG*FMMDWR
Trigger: TCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCCAAGTAATTGTAGGATaGAGGGGCTTGGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIQVIVG*RGLGVL
Trigger: CAACACTCCCAAGCCCCTCCATCCTACAATTACTTG...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTACACACTCTTCATTGTaGCACAAATTTAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSTHSSL*HKFKSP
Trigger: AGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGTGGAATCATATTTTCTaGGGTGTAACTGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGWNHIF*GVTGFH
Trigger: ATGAAAGCCAGTTACACCTCAGAAAATATGATTCCA...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACATACACAGATTATCTaGGAAAAGGTCAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKHTQII*EKVKGS
Trigger: GGAACCCTTGACCTTTTCTCAGATAATCTGTGTATG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTCTCTGATTCTCAGATaGGAGGATGTAGGAACGCAA +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTSLILR*EDVGTQ
Trigger: TTGCGTTCCTACATCCTCTCATCTGAGAATCAGAGA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR GCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTACAGGAAGTGCAGGTTaGCCACATTGTCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTTGSAG*PHCQCS
Trigger: ACTACATTGACAATGTGGGCAACCTGCACTTCCTGT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCGCCATAATGTACCCTTaGCAGACTTCAGCATATACC +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIAIMYP*QTSAYT
Trigger: GGTATATGCTGAAGTCTGCCAAGGGTACATTATGGC...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGAAGATTATGCTCTCTaGTTCTCAGATGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTEDYAL*FSDERM
Trigger: CATCCTCTCATCTGAGAATCAGAGAGCATAATCTTC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR TCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCACCTTTACAGAGTTCTaGATACAGGAAGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHITFTEF*IQEVQV
Trigger: AACCTGCACTTCCTGTATTCAGAACTCTGTAAAGGT...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTCACCGGGGTCTTTTTaGATATTTACCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTSPGSF*IFTTFS
Trigger: TGAGAAGGTGGTAAATATCCAAAAAGACCCCGGTGA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCCCTGGTGAAACCAAATaGGGTACACTTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIPGETK*GTLSYP
Trigger: TGGATATGAAAGTGTACCCCATTTGGTTTCACCAGG...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTTCTTTCAGCAGTCTTaGCAAGCAAGCATGTATCAT +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTFFQQS*QASMYH
Trigger: ATGATACATGCTTGCTTGGCAAGACTGCTGAAAGAA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCTCCATCATTGTATGCTaGTGTTCCTTCAACAATGGA +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHISIIVC*CSFNNG
Trigger: TCCATTGTTGAAGGAACACCAGCATACAATGATGGA...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR TCA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTATGTACTTCTACCATTaGCAGCAAGAAGAATATCAC +
Preference number: 4 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTMYFYH*QQEEYH
Trigger: GTGATATTCTTCTTGCTGTCAATGGTAGAAGTACAT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR GCA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCTCTTCCATCATTGTATaGTGGTGTTCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHISSIIV*WCSFNN
Trigger: ATTGTTGAAGGAACACCAGCATACAATGATGGAAGA...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCCCTGGTCGGCATGGTaGGCAACTGCACTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNPWSAW*ATALPL
Trigger: GAGCGGGAGTGCAGTTGCCAACCATGCCGACCAGGG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CCA 90 bp CAGGCAGGCAGCTCTCATTCCTTGTGGGTGAACCGAGCAGCTCCTTaGGCCGCCGGAGTTGTGACCAGCCTCAACTTCGGTGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: QAGSSHSLWVNRAAP*AAGVVTSLNFGEQV
Trigger: CACCTGTTCACCGAAGTTGAGGCTGGTCACAACTCCGGCGGCCCAAGGAGCTGCTCGGTTCACCCACAAGGAATGAGAGCTGCCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504299.5
ENST00000504605.1
ENST00000507168.5
ENST00000512247.5
ENST00000513421.5
CDS-3UTR CAA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATCTCCAAGGAGTGGGCTaGGCCACACACTGCACACAG +
Preference number: 5 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNLQGVG*ATHCTQ
Trigger: CTGTGTGCAGTGTGTGGCCAAGCCCACTCCTTGGAG...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS GCA 90 bp GGACCAGTCACTGGGTGGGGCCATGTTGTGGTTGGAGTCCAGGGCTaGTGGGCTGCTGCAGTCTTCCTGGGGCTCATACTCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: GPVTGWGHVVVGVQG*WAAAVFLGLILFDF
Trigger: GAAGTCAAAGAGTATGAGCCCCAGGAAGACTGCAGCAGCCCAGCAGCCCTGGACTCCAACCACAACATGGCCCCACCCAGTGACTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CGGGCAGTGAGCCTGCCCCTGAACAGGAGAGCACCGAAGCTACACCTGCAGAATGCTGGTTTGGCCTTCTaGATGCATTTTCCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: RAVSLPLNRRAPKLHLQNAGLAF*MHFPRP
Trigger: GGGCCTTGGAAAATGCATCAAGAAGGCCAAACCAGC...ATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGTTCAGGGGCAGGCTCACTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGGGACCAGCTGCCATaGCTGTTCCAGCCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGDQLP*LFQPAS
Trigger: GGAAGCCGGCTGGAACAGCAATGGCAGCTGGTCCCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGGGGCCATGTTGTGGTaGGAGTCCAGGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCGAMLW*ESRAAG
Trigger: CCCAGCAGCCCTGGACTCCAACCACAACATGGCCCC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS TCA 90 bp GTAGTGGGAGGCACCTTTACAGCTGTAACAGAACCAGCGGGGAGGTaGAGAAGAGCTTTGGCTCTGCTGCCATTCCTCAGTCAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: VVGGTFTAVTEPAGR*RRALALLPFLSQPS
Trigger: AGAGGGCTGACTGAGGAATGGCAGCAGAGCCAAAGCTCTTCTTCACCTCCCCGCTGGTTCTGTTACAGCTGTAAAGGTGCCTCCCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS GCA 90 bp GCTGTAGAAGTGGTTTTCCTCCAAGGAGTGGGCTTGGCCACACACTaGACACAGGGGTTCAGGATCGTTGGCAGACTCTGGCTGGTTCAT +
Preference number: 5 (lower is better)
Translates to: AVEVVFLQGVGLATH*TQGFRIVGRLWLVH
Trigger: ATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCTGTGTGCAGTGTGTGGCCAAGCCCACTCCTTGGAGGAAAACCACTTCTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS CCA 90 bp CACAGCCGTCTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGGCACCTTTACAGCTGTAACAGAACC +
Preference number: 5 (lower is better)
Translates to: HSRLDSHLVSASSYL*SGRSGRHLYSCNRT
Trigger: GGTTCTGTTACAGCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAGACGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS TCA 90 bp GGGCTCAACACTGATGACATAGATAGGCAAATCCCATTCTCTATGTaGTGCTCCCCCTGCGACGGTCATGCCGAGAGATTCACCGGGGTC +
Preference number: 5 (lower is better)
Translates to: GLNTDDIDRQIPFSM*CSPCDGHAERFTGV
Trigger: GACCCCGGTGAATCTCTCGGCATGACCGTCGCAGGGGGAGCATCACATAGAGAATGGGATTTGCCTATCTATGTCATCAGTGTTGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CCA 90 bp CACAGCCGTCTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGGCACCTTTACAGCTGGTTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: HSRLDSHLVSASSYL*SGRSGRHLYSWFES
Trigger: ACTTTCAAACCAGCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAGACGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS GCA 90 bp AGCTTGTTGAGGAGTTTGTTGACCAGGATGCTGGACTTCTTGCAGTaGTGCAGAACCAGAGGCTTGCGGTCCATGGGACAGAAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLLRSLLTRMLDFLQ*CRTRGLRSMGQKSF
Trigger: GAAGGACTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS CCA 90 bp CACAGCCGTCTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGGCACCTTTACAGAGTTCTGAATACA +
Preference number: 5 (lower is better)
Translates to: HSRLDSHLVSASSYL*SGRSGRHLYRVLNT
Trigger: TGTATTCAGAACTCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAGACGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CAA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTTTCTCCACCAGGAAGTaGGTGAGGCAGAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCFSTRK*VRQRVQ
Trigger: CTGCACCCTCTGCCTCACCAACTTCCTGGTGGAGAA...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTAGGGGCTTGGGAGTGTaGCTCCTCTCCCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSRGLGV*LLSPGP
Trigger: AGGGCCAGGGGAGAGGAGCAACACTCCCAAGCCCCT...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CCA 90 bp TTGGCCACACACTGCACACAGGGGTTCAGGATCGTTGGCAGACTCTaGCTGGTTCATGATGGATTGGAGAGCAGTATAACAGGAAACTCA +
Preference number: 5 (lower is better)
Translates to: LATHCTQGFRIVGRL*LVHDGLESSITGNS
Trigger: TGAGTTTCCTGTTATACTGCTCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCTGTGTGCAGTGTGTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS-3UTR CAA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCGTGCCCTAGTTCGGTaGCTCCGGCCAGAGTCCACT +
Preference number: 5 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGRALVR*LRPEST
Trigger: AGTGGACTCTGGCCGGAGCAACCGAACTAGGGCACG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCAAGGAGCCACCACGGTaGGCGAGAGAGCTTAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLKEPPR*ARELRL
Trigger: CAGCCTAAGCTCTCTCGCCAACCGTGGTGGCTCCTT...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS TCA 90 bp ATAAATCACGGGCCCGTAAGAAGATTATGCTCTCTGATTCTCAGATaGGAGGATGTAGGAACGCAAGGAGCCACCACGGTTGGCGAGAGA +
Preference number: 5 (lower is better)
Translates to: INHGPVRRLCSLILR*EDVGTQGATTVGER
Trigger: TCTCTCGCCAACCGTGGTGGCTCCTTGCGTTCCTACATCCTCTCATCTGAGAATCAGAGAGCATAATCTTCTTACGGGCCCGTGATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CAA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCAGGGGTTCAGGATCGTaGGCAGACTCTGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLRGSGS*ADSGWF
Trigger: GAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCT...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGGTAGGATGGAGGGGCTaGGGAGTGTTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGVGWRG*GVLLLS
Trigger: GGAGAGGAGCAACACTCCCAAGCCCCTCCATCCTAC...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS TCA 90 bp CTGCACACAGGGGTTCAGGATCGTTGGCAGACTCTGGCTGGTTCATaGTGGATTGGAGAGCAGTATAACAGGAAACTCAGTCACACAATA +
Preference number: 5 (lower is better)
Translates to: LHTGVQDRWQTLAGS*WIGEQYNRKLSHTI
Trigger: TATTGTGTGACTGAGTTTCCTGTTATACTGCTCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCTGTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263925.8
ENST00000507168.5
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS-3UTR CAA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTTTGTTGAGGAGTTTGTaGACCAGGATGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCLLRSL*TRMLDF
Trigger: GAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAA...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACGTGCCCTAGTTCGGTaGCTCCGGCCAGAGTCCACT +
Preference number: 5 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKRALVR*LRPEST
Trigger: AGTGGACTCTGGCCGGAGCAACCGAACTAGGGCACG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTCCCTGGTCGGCATGGTaGGCAACTGCACTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTPWSAW*ATALPL
Trigger: GAGCGGGAGTGCAGTTGCCAACCATGCCGACCAGGG...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCCGCCATCCAGCACATaGAAGATGAAAACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSPPSST*KMKTPG
Trigger: GCCTGGGGTTTTCATCTTCAATGTGCTGGATGGCGG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTAGGGGCTTGGGAGTGTaGCTCCTCTCCCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTRGLGV*LLSPGP
Trigger: AGGGCCAGGGGAGAGGAGCAACACTCCCAAGCCCCT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTGGGGCCATGTTGTGGTaGGAGTCCAGGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTGAMLW*ESRAAG
Trigger: CCCAGCAGCCCTGGACTCCAACCACAACATGGCCCC...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS GCA 90 bp CATCAAGTTCATGTTGAGGGCCAAACCTGTCCACCTAAGTGCCTTTaGACCACACACTTCTACCACTGGGAATCATTGGAAGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HQVHVEGQTCPPKCL*TTHFYHWESLEASF
Trigger: GAAAGAAGCTTCCAATGATTCCCAGTGGTAGAAGTGTGTGGTGCAAAGGCACTTAGGTGGACAGGTTTGGCCCTCAACATGAACTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513421.5
CDS-3UTR CAA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTCTGATGTCCATCCCGTaGACCTTTAGAATGATGTCT +
Preference number: 5 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCLMSIP*TFRMMS
Trigger: AGACATCATTCTAAAGGTCAACGGGATGGACATCAG...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCGCCATCCAGCACATaGAAGATGAAAACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGPPSST*KMKTPG
Trigger: GCCTGGGGTTTTCATCTTCAATGTGCTGGATGGCGG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp ACAGGAGAGCACCGAAGCTACACCTGCAGAATAGGCATGGTTTTGGCCTTTTGTGTTCTTTCAGCAGTCTaGCCAAGCAAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: TGEHRSYTCRIGMVLAFCVLSAV*PSKHVS
Trigger: TGATACATGCTTGCTTGGCAAGACTGCTGAAAGAAC...ACAAAAGGCCAAAACCATGCCTATTCTGCAGGTGTAGCTTCGGTGCTCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CCA 90 bp GCGTCTCTTTGTGGACAAATAAATCAGTTAGAGCAATTTGCCAGGTaGAATTTACTTTCTTTCCTGAGCACAGCACGTGTCCAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: ASLCGQINQLEQFAR*NLLSFLSTARVQPR
Trigger: ACGGGGCTGGACACGTGCTGTGCTCAGGAAAGAAAGTAAATTCCACCTGGCAAATTGCTCTAACTGATTTATTTGTCCACAAAGAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512247.5
CDS-3UTR CAA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAGGCAGCTCTCATTCCTaGTGGGTGAACCGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKGSSHS*WVNRAA
Trigger: AGCTGCTCGGTTCACCCACAAGGAATGAGAGCTGCC...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCGTAGGATGGAGGGGCTaGGGAGTGTTGCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIVGWRG*GVLLLS
Trigger: GGAGAGGAGCAACACTCCCAAGCCCCTCCATCCTAC...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTTCCTTTAAGCAAACCTaGCCATGCCCCCACAATCAG +
Preference number: 5 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSSFKQT*PCPHNQ
Trigger: CTGATTGTGGGGGCATGGCAAGGTTTGCTTAAAGGA...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTTGCAGAACCAGAGGCTaGCGGTCCATGGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTCRTRG*RSMGQK
Trigger: CTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGCA...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp TGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACAGTCAGGGTCAAGCTGGTTaGGCCTTCTTGATGCATTTT +
Preference number: 5 (lower is better)
Translates to: CTYTDYLRKGQGFHLGHSQGQAG*AFLMHF
Trigger: AAAATGCATCAAGAAGGCCAAACCAGCTTGACCCTG...ACTGTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS TCA 90 bp AGCAAACCTTGCCATGCCCCCACAATCAGTAGATCACAAAGAATTTaGCTGAGAACCTTCAGATTAAGCCACGTTAATAAATCACGGGCC +
Preference number: 5 (lower is better)
Translates to: SKPCHAPTISRSQRI*LRTFRLSHVNKSRA
Trigger: GGCCCGTGATTTATTAACGTGGCTTAATCTGAAGGTTCTCAGTCAAATTCTTTGTGATCTACTGATTGTGGGGGCATGGCAAGGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS CCA 90 bp AACAGGTGCCTGAATACCTGCAAGCAGGTAGGTGGCGTCTCTTTGTaGACAAATAAATCAGTTAGAGCAATTTGCCAGGTGGAATTTACT +
Preference number: 5 (lower is better)
Translates to: NRCLNTCKQVGGVSL*TNKSVRAICQVEFT
Trigger: AGTAAATTCCACCTGGCAAATTGCTCTAACTGATTTATTTGTCCACAAAGAGACGCCACCTACCTGCTTGCAGGTATTCAGGCACCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512247.5
CDS-3UTR CAA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCTGGTTCATGATGGATaGGAGAGCAGTATAACAGGA +
Preference number: 5 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGLVHDG*ESSITG
Trigger: TCCTGTTATACTGCTCTCCAATCCATCATGAACCAG...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAAGTCACCAGTAGCTTGTaGAGGAGTTTGTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKVTSSL*RSLLTR
Trigger: CCTGGTCAACAAACTCCTCAACAAGCTACTGGTGAC...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAACAGGTCACCAGTAGCTaGTTGAGGAGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKQVTSS*LRSLLT
Trigger: GGTCAACAAACTCCTCAACAAGCTACTGGTGACCTG...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp CTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGCCACTTGACTTCCAAAGCTTaGAGTACTATCGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: LCTYTDYLRKGQGFHLGHLTSKA*STIEDD
Trigger: ATCATCCTCGATAGTACTCAAAGCTTTGGAAGTCAA...GTGGCCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTAGCTTGTTGAGGAGTTaGTTGACCAGGATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTSLLRS*LTRMLD
Trigger: GTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS-3UTR CAA 90 bp CTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATCGCCTCACTGCTGTGACACTCTaGCTTAGTATATTAAGAGAC +
Preference number: 5 (lower is better)
Translates to: LGGMCTHTLHCGTNLNRLTAVTL*LSILRD
Trigger: GTCTCTTAATATACTAAGCAAGAGTGTCACAGCAGT...GAGGCGATTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp GTAGTTTCTAGGAGGCATGTGTACACACACTCTTCATTGTGGCACAAATTTAAATTCACCGGGGTCTTTTaGGATATTTACCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: VVSRRHVYTHSSLWHKFKFTGVF*DIYHLL
Trigger: GAGAAGGTGGTAAATATCCAAAAAGACCCCGGTGAA...TTTAAATTTGTGCCACAATGAAGAGTGTGTGTACACATGCCTCCTAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp TTAGCTGTGTACATACACAGATTATCTGAGAAAAGGTCAAGGGTTCCACTTGGGTTGACTTCCAAAGCTTaGAGTACTATCGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: LAVYIHRLSEKRSRVPLGLTSKA*STIEDD
Trigger: ATCATCCTCGATAGTACTCAAAGCTTTGGAAGTCAA...CCCAAGTGGAACCCTTGACCTTTTCTCAGATAATCTGTGTATGTACACAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTCTGATGTCCATCCCGTaGACCTTTAGAATGATGTCT +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTLMSIP*TFRMMS
Trigger: AGACATCATTCTAAAGGTCAACGGGATGGACATCAG...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAATATTCTAAATTTGGGTTCCTGGTGAAACCAAATGGGGTACACTTTCATATCTTCACCGGGGTCTTTTaGGATATTTACCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: QYSKFGFLVKPNGVHFHIFTGVF*DIYHLL
Trigger: GAGAAGGTGGTAAATATCCAAAAAGACCCCGGTGAA...GATATGAAAGTGTACCCCATTTGGTTTCACCAGGAACCCAAATTTAGAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS TCA 90 bp TTTAAGTTCTTTCAGCAGTCTTGCCAAGCAAGCATGTATCATTCCTaGTGTACTTCTACCATTGACAGCAAGAAGAATATCACCACATCT +
Preference number: 5 (lower is better)
Translates to: FKFFQQSCQASMYHS*CTSTIDSKKNITTS
Trigger: AGATGTGGTGATATTCTTCTTGCTGTCAATGGTAGAAGTACATCAGGAATGATACATGCTTGCTTGGCAAGACTGCTGAAAGAACTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS-3UTR CAA 90 bp CAGAATAGGCATGGTTTTGGCCTTTTGTGTATATTAGTACCAGAAGTAGATACTACTGCTGTGACACTCTaGCTTAGTATATTAAGAGAC +
Preference number: 5 (lower is better)
Translates to: QNRHGFGLLCILVPEVDTTAVTL*LSILRD
Trigger: GTCTCTTAATATACTAAGCAAGAGTGTCACAGCAGT...AGTATCTACTTCTGGTACTAATATACACAAAAGGCCAAAACCATGCCTATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS TCA 72 bp GGGGACCAGCTGCCATTGCTGTTCCAGCCGGCTTCCTaGAAGATGTCAGGGCTCCGCTGCCGAACCTGGCGG +
Preference number: 6 (lower is better)
Translates to: GDQLPLLFQPAS*KMSGLRCRTWR
Trigger: CCGCCAGGTTCGGCAGCGGAGCCCTGACATCTTTCAGGAAGCCGGCTGGAACAGCAATGGCAGCTGGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CAA 72 bp CAGCTCTCATTCCTTGTGGGTGAACCGAGCAGCTCCTaGGGCCGCCGGAGTTGTGACCAGCCTCAACTTCGG +
Preference number: 6 (lower is better)
Translates to: QLSFLVGEPSSS*GRRSCDQPQLR
Trigger: CCGAAGTTGAGGCTGGTCACAACTCCGGCGGCCCAAGGAGCTGCTCGGTTCACCCACAAGGAATGAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504299.5
ENST00000504605.1
ENST00000507168.5
ENST00000512247.5
ENST00000513421.5
CDS GCA 72 bp TGCTCGAGGTCACAGCGCTGCAACACCTGGGTGCAGTaGTCCCTGAATGGGCAGGTCACCAGTAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: CSRSQRCNTWVQ*SLNGQVTSSLL
Trigger: CAACAAGCTACTGGTGACCTGCCCATTCAGGGAGCACTGCACCCAGGTGTTGCAGCGCTGTGACCTCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS CCA 72 bp AGCTCTCATTCCTTGTGGGTGAACCGAGCAGCTCCTTaGGCCGCCGGAGTTGTGACCAGCCTCAACTTCGGT +
Preference number: 6 (lower is better)
Translates to: SSHSLWVNRAAP*AAGVVTSLNFG
Trigger: ACCGAAGTTGAGGCTGGTCACAACTCCGGCGGCCCAAGGAGCTGCTCGGTTCACCCACAAGGAATGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504299.5
ENST00000504605.1
ENST00000507168.5
ENST00000512247.5
ENST00000513421.5
CDS TCA 72 bp TGTGAGGCTCGCACAGCCGTCTGGACAGCCATCTTGTaGGCGCCTCTTCCTATCTTTGGTCAGGCCGTAGTG +
Preference number: 6 (lower is better)
Translates to: CEARTAVWTAIL*APLPIFGQAVV
Trigger: CACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAGACGGCTGTGCGAGCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263925.8
ENST00000306888.6
ENST00000511398.1
CDS GCA 72 bp GTGGTTTTCCTCCAAGGAGTGGGCTTGGCCACACACTaGACACAGGGGTTCAGGATCGTTGGCAGACTCTGG +
Preference number: 6 (lower is better)
Translates to: VVFLQGVGLATH*TQGFRIVGRLW
Trigger: CCAGAGTCTGCCAACGATCCTGAACCCCTGTGTGCAGTGTGTGGCCAAGCCCACTCCTTGGAGGAAAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS GCA 72 bp ACCTTTGTACGTGCGGGGGTTAACCTGGGCATCCCCTaGCCCTTCTGCAAGGCTTTGAGTAGAGCAGATCCA +
Preference number: 6 (lower is better)
Translates to: TFVRAGVNLGIP*PFCKALSRADP
Trigger: TGGATCTGCTCTACTCAAAGCCTTGCAGAAGGGGCAGGGGATGCCCAGGTTAACCCCCGCACGTACAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504605.1
ENST00000507168.5
ENST00000510143.1
CDS CCA 72 bp CTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGGCACCTTTACAGCTGG +
Preference number: 6 (lower is better)
Translates to: LDSHLVSASSYL*SGRSGRHLYSW
Trigger: CCAGCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263925.8
CDS CAA 72 bp ATGCTGGACTTCTTGCAGTGCTGCAGAACCAGAGGCTaGCGGTCCATGGGACAGAAGTCCTTCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: MLDFLQCCRTRG*RSMGQKSFSTR
Trigger: CCTGGTGGAGAAGGACTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000513421.5
CDS CAA 90 bp TTGACCAGGATGCTGGACTTCTTGCAGTGCTGCAGAACCAGAGGCTaGCGGTCCATGGGACAGAAGTCCTTCTCCACCAGGAAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: LTRMLDFLQCCRTRG*RSMGQKSFSTRKLV
Trigger: CACCAACTTCCTGGTGGAGAAGGACTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000513421.5
CDS CAA 90 bp ACCTGGGTGCAGTGCTCCCTGAATGGGCAGGTCACCAGTAGCTTGTaGAGGAGTTTGTTGACCAGGATGCTGGACTTCTTGCAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: TWVQCSLNGQVTSSL*RSLLTRMLDFLQCC
Trigger: GCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGTGACCTGCCCATTCAGGGAGCACTGCACCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS GCA 72 bp AGGAGTTTGTTGACCAGGATGCTGGACTTCTTGCAGTaGTGCAGAACCAGAGGCTTGCGGTCCATGGGACAG +
Preference number: 6 (lower is better)
Translates to: RSLLTRMLDFLQ*CRTRGLRSMGQ
Trigger: CTGTCCCATGGACCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000513421.5
CDS CCA 72 bp CTCTGGAGGTCTCTTCTTACCGGGGAGGATGATCCCTaGTGGCTCCCTGCTGACATTCTTCAAAACTCGGCT +
Preference number: 6 (lower is better)
Translates to: LWRSLLTGEDDP*WLPADILQNSA
Trigger: AGCCGAGTTTTGAAGAATGTCAGCAGGGAGCCACCAGGGATCATCCTCCCCGGTAAGAAGAGACCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513421.5
CDS CCA 72 bp CTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGGCACCTTTACAGCTGT +
Preference number: 6 (lower is better)
Translates to: LDSHLVSASSYL*SGRSGRHLYSC
Trigger: ACAGCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS CAA 72 bp GCTTGGCCACACACTGCACACAGGGGTTCAGGATCGTaGGCAGACTCTGGCTGGTTCATGATGGATTGGAGA +
Preference number: 6 (lower is better)
Translates to: AWPHTAHRGSGS*ADSGWFMMDWR
Trigger: TCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCTGTGTGCAGTGTGTGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS CAA 90 bp TTCCTCTGGATAGCTGTAGAAGTGGTTTTCCTCCAAGGAGTGGGCTaGGCCACACACTGCACACAGGGGTTCAGGATCGTTGGCAGACTC +
Preference number: 6 (lower is better)
Translates to: FLWIAVEVVFLQGVG*ATHCTQGFRIVGRL
Trigger: GAGTCTGCCAACGATCCTGAACCCCTGTGTGCAGTGTGTGGCCAAGCCCACTCCTTGGAGGAAAACCACTTCTACAGCTATCCAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS CAA 90 bp TGCTCCCTGAATGGGCAGGTCACCAGTAGCTTGTTGAGGAGTTTGTaGACCAGGATGCTGGACTTCTTGCAGTGCTGCAGAACCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CSLNGQVTSSLLRSL*TRMLDFLQCCRTRG
Trigger: GCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGTGACCTGCCCATTCAGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS CAA 90 bp AACACCTGGGTGCAGTGCTCCCTGAATGGGCAGGTCACCAGTAGCTaGTTGAGGAGTTTGTTGACCAGGATGCTGGACTTCTTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: NTWVQCSLNGQVTSS*LRSLLTRMLDFLQC
Trigger: GCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGTGACCTGCCCATTCAGGGAGCACTGCACCCAGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS TCA 72 bp GGCACCTTTACAGCTGTAACAGAACCAGCGGGGAGGTaGAGAAGAGCTTTGGCTCTGCTGCCATTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: GTFTAVTEPAGR*RRALALLPFLS
Trigger: ACTGAGGAATGGCAGCAGAGCCAAAGCTCTTCTTCACCTCCCCGCTGGTTCTGTTACAGCTGTAAAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS GCA 72 bp AGTTTGTTGACCAGGATGCTGGACTTCTTGCAGTGCTaGAGAACCAGAGGCTTGCGGTCCATGGGACAGAAG +
Preference number: 6 (lower is better)
Translates to: SLLTRMLDFLQC*RTRGLRSMGQK
Trigger: CTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263925.8
ENST00000510143.1
ENST00000513421.5
CDS CCA 72 bp CTGGACAGCCATCTTGTGAGCGCCTCTTCCTATCTTTaGTCAGGCCGTAGTGGGAGGCACCTTTACAGAGTT +
Preference number: 6 (lower is better)
Translates to: LDSHLVSASSYL*SGRSGRHLYRV
Trigger: AACTCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAAGATAGGAAGAGGCGCTCACAAGATGGCTGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS CAA 90 bp ACCAGTAGCTTGTTGAGGAGTTTGTTGACCAGGATGCTGGACTTCTaGCAGTGCTGCAGAACCAGAGGCTTGCGGTCCATGGGACAGAAG +
Preference number: 6 (lower is better)
Translates to: TSSLLRSLLTRMLDF*QCCRTRGLRSMGQK
Trigger: CTTCTGTCCCATGGACCGCAAGCCTCTGGTTCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS GCA 72 bp TTTCCAGTGTTCTTCGTCCCAGCTATGCATGAAAACTaGTCCACCTTTGTACGTGCGGGGGTTAACCTGGGC +
Preference number: 6 (lower is better)
Translates to: FPVFFVPAMHEN*STFVRAGVNLG
Trigger: GCCCAGGTTAACCCCCGCACGTACAAAGGTGGAGCAGTTTTCATGCATAGCTGGGACGAAGAACACTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504605.1
ENST00000507168.5
ENST00000510143.1
CDS GCA 72 bp GAGCTTCGAGGGAGAGTGGTCCCCTGCAGAGCAGCATaGATTAGCATCAGTGACAAATCTCTTCTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: ELRGRVVPCRAA*ISISDKSLLVW
Trigger: CCAAACCAGAAGAGATTTGTCACTGATGCTAATGCATGCTGCTCTGCAGGGGACCACTCTCCCTCGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510143.1
CDS GCA 72 bp CAGAACCAGCGGGGAGGTGAAGAAGAGCTTTGGCTCTaGTGCCATTCCTCAGTCAGCCCTCTTCAAATACAA +
Preference number: 6 (lower is better)
Translates to: QNQRGGEEELWL*CHSSVSPLQIQ
Trigger: TTGTATTTGAAGAGGGCTGACTGAGGAATGGCAGCAGAGCCAAAGCTCTTCTTCACCTCCCCGCTGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS CCA 72 bp TGGAGGTCTCTTCTTACCGGGGAGGATGATCCCTGGTaGCTCCCTGCTGACATTCTTCAAAACTCGGCTATT +
Preference number: 6 (lower is better)
Translates to: WRSLLTGEDDPW*LPADILQNSAI
Trigger: AATAGCCGAGTTTTGAAGAATGTCAGCAGGGAGCCACCAGGGATCATCCTCCCCGGTAAGAAGAGACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513421.5
CDS CAA 72 bp CTGAATGGGCAGGTCACCAGTAGCTTGTTGAGGAGTTaGTTGACCAGGATGCTGGACTTCTTGCAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LNGQVTSSLLRS*LTRMLDFLQCC
Trigger: GCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGTGACCTGCCCATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS CAA 72 bp CAGTGCTCCCTGAATGGGCAGGTCACCAGTAGCTTGTaGAGGAGTTTGTTGACCAGGATGCTGGACTTCTTG +
Preference number: 6 (lower is better)
Translates to: QCSLNGQVTSSL*RSLLTRMLDFL
Trigger: CAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGTGACCTGCCCATTCAGGGAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS CAA 72 bp GTTCCCAGCTGTGTGACGTCTCAGGAGATAGTCCGTTaGAGAGCTGAGCTTTTCTGGCTTAGCAGTAGCTCG +
Preference number: 6 (lower is better)
Translates to: VPSCVTSQEIVR*RAELFWLSSSS
Trigger: CGAGCTACTGCTAAGCCAGAAAAGCTCAGCTCTCAAACGGACTATCTCCTGAGACGTCACACAGCTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504605.1
ENST00000507168.5
ENST00000510143.1
CDS TCA 72 bp GGGCCCGTAAGAAGATTATGCTCTCTGATTCTCAGATaGGAGGATGTAGGAACGCAAGGAGCCACCACGGTT +
Preference number: 6 (lower is better)
Translates to: GPVRRLCSLILR*EDVGTQGATTV
Trigger: AACCGTGGTGGCTCCTTGCGTTCCTACATCCTCTCATCTGAGAATCAGAGAGCATAATCTTCTTACGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS GCA 72 bp AACCAGCGGGGAGGTGAAGAAGAGCTTTGGCTCTGCTaGCATTCCTCAGTCAGCCCTCTTCAAATACAATTG +
Preference number: 6 (lower is better)
Translates to: NQRGGEEELWLC*HSSVSPLQIQL
Trigger: CAATTGTATTTGAAGAGGGCTGACTGAGGAATGGCAGCAGAGCCAAAGCTCTTCTTCACCTCCCCGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS CCA 72 bp CACTGCACACAGGGGTTCAGGATCGTTGGCAGACTCTaGCTGGTTCATGATGGATTGGAGAGCAGTATAACA +
Preference number: 6 (lower is better)
Translates to: HCTQGFRIVGRL*LVHDGLESSIT
Trigger: TGTTATACTGCTCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCTGTGTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263925.8
ENST00000507168.5
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS CAA 72 bp AATGGGCAGGTCACCAGTAGCTTGTTGAGGAGTTTGTaGACCAGGATGCTGGACTTCTTGCAGTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: NGQVTSSLLRSL*TRMLDFLQCCR
Trigger: TCTGCAGCACTGCAAGAAGTCCAGCATCCTGGTCAACAAACTCCTCAACAAGCTACTGGTGACCTGCCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000513421.5
CDS TCA 72 bp GGGGTTCAGGATCGTTGGCAGACTCTGGCTGGTTCATaGTGGATTGGAGAGCAGTATAACAGGAAACTCAGT +
Preference number: 6 (lower is better)
Translates to: GVQDRWQTLAGS*WIGEQYNRKLS
Trigger: ACTGAGTTTCCTGTTATACTGCTCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263925.8
ENST00000507168.5
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS TCA 72 bp ACTGATGACATAGATAGGCAAATCCCATTCTCTATGTaGTGCTCCCCCTGCGACGGTCATGCCGAGAGATTC +
Preference number: 6 (lower is better)
Translates to: TDDIDRQIPFSM*CSPCDGHAERF
Trigger: GAATCTCTCGGCATGACCGTCGCAGGGGGAGCATCACATAGAGAATGGGATTTGCCTATCTATGTCATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS GCA 72 bp CAAGTTCATGTTGAGGGCCAAACCTGTCCACCTAAGTaGCTTTGCACCACACACTTCTACCACTGGGAATCA +
Preference number: 6 (lower is better)
Translates to: QVHVEGQTCPPK*LCTTHFYHWES
Trigger: TGATTCCCAGTGGTAGAAGTGTGTGGTGCAAAGGCACTTAGGTGGACAGGTTTGGCCCTCAACATGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513421.5
CDS CAA 72 bp GCTGGGCTGCTGCAGTCTTCCTGGGGCTCATACTCTTaGACTTCCAAAGCTTTGAGTACTATCGAGGATGAT +
Preference number: 6 (lower is better)
Translates to: AGLLQSSWGSYS*TSKALSTIEDD
Trigger: ATCATCCTCGATAGTACTCAAAGCTTTGGAAGTCAAAGAGTATGAGCCCCAGGAAGACTGCAGCAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CAA 90 bp TGCGGATCAGTTCCCAGCTGTGTGACGTCTCAGGAGATAGTCCGTTaGAGAGCTGAGCTTTTCTGGCTTAGCAGTAGCTCGGAAAATTTT +
Preference number: 6 (lower is better)
Translates to: CGSVPSCVTSQEIVR*RAELFWLSSSSENF
Trigger: AAAATTTTCCGAGCTACTGCTAAGCCAGAAAAGCTCAGCTCTCAAACGGACTATCTCCTGAGACGTCACACAGCTGGGAACTGATCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504605.1
ENST00000507168.5
ENST00000510143.1
CDS TCA 72 bp ATGTTCTTTTCAATAATGCCACTGCCTCACTCCGGCTaGCCTCTGTCAGTTCGACCCCATCCACATTCAACA +
Preference number: 6 (lower is better)
Translates to: MFFSIMPLPHSG*PLSVRPHPHST
Trigger: TGTTGAATGTGGATGGGGTCGAACTGACAGAGGTCAGCCGGAGTGAGGCAGTGGCATTATTGAAAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS GCA 72 bp AGGGCCCAAACCAGCCAAGCTCCTTTAAGCAAACCTTaGCATGCCCCCACAATCAGTAGATCACAAAGAATT +
Preference number: 6 (lower is better)
Translates to: RAQTSQAPLSKP*HAPTISRSQRI
Trigger: AATTCTTTGTGATCTACTGATTGTGGGGGCATGGCAAGGTTTGCTTAAAGGAGCTTGGCTGGTTTGGGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306888.6
CDS GCA 72 bp TTTTCTTTCTCTTTCCAGTGTTCTTCGTCCCAGCTATaGATGAAAACTGCTCCACCTTTGTACGTGCGGGGG +
Preference number: 6 (lower is better)
Translates to: FSFSFQCSSSQL*MKTAPPLYVRG
Trigger: CCCCCGCACGTACAAAGGTGGAGCAGTTTTCATGCATAGCTGGGACGAAGAACACTGGAAAGAGAAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504605.1
ENST00000507168.5
ENST00000510143.1
CDS CAA 90 bp CAGGGGTTCAGGATCGTTGGCAGACTCTGGCTGGTTCATGATGGATaGGAGAGCAGTATAACAGGAAACTCAGTCACACAATATTTCCTC +
Preference number: 6 (lower is better)
Translates to: QGFRIVGRLWLVHDG*ESSITGNSVTQYFL
Trigger: GAGGAAATATTGTGTGACTGAGTTTCCTGTTATACTGCTCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCTGAACCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263925.8
ENST00000507168.5
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS CAA 72 bp AGGATCGTTGGCAGACTCTGGCTGGTTCATGATGGATaGGAGAGCAGTATAACAGGAAACTCAGTCACACAA +
Preference number: 6 (lower is better)
Translates to: RIVGRLWLVHDG*ESSITGNSVTQ
Trigger: TTGTGTGACTGAGTTTCCTGTTATACTGCTCTCCAATCCATCATGAACCAGCCAGAGTCTGCCAACGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263925.8
ENST00000507168.5
ENST00000510143.1
ENST00000512247.5
ENST00000513421.5
CDS CAA 90 bp GTGAACAGGTGCCTGAATACCTGCAAGCAGGTAGGTGGCGTCTCTTaGTGGACAAATAAATCAGTTAGAGCAATTTGCCAGGTGGAATTT +
Preference number: 6 (lower is better)
Translates to: VNRCLNTCKQVGGVS*WTNKSVRAICQVEF
Trigger: AAATTCCACCTGGCAAATTGCTCTAACTGATTTATTTGTCCACAAAGAGACGCCACCTACCTGCTTGCAGGTATTCAGGCACCTGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512247.5
CDS CAA 72 bp TGCGACGGTCATGCCGAGAGATTCACCGGGGTCTTTTaGGATATTTACCACCTTCTCATGACAAGTAATTGT +
Preference number: 6 (lower is better)
Translates to: CDGHAERFTGVF*DIYHLLMTSNC
Trigger: ACAATTACTTGTCATGAGAAGGTGGTAAATATCCAAAAAGACCCCGGTGAATCTCTCGGCATGACCGTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CAA 90 bp AGTCAGCCCTCTTCAAATACAATTGAAGAATGTATAATAGGCTTGTaGAACTTGGAATTTGATTTGCCTGCCGCTATATCCTCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: SQPSSNTIEECIIGL*NLEFDLPAAISSLP
Trigger: GGGAAGAGAGGATATAGCGGCAGGCAAATCAAATTCCAAGTTCAACAAGCCTATTATACATTCTTCAATTGTATTTGAAGAGGGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS TCA 72 bp TTTCAGCAGTCTTGCCAAGCAAGCATGTATCATTCCTaGTGTACTTCTACCATTGACAGCAAGAAGAATATC +
Preference number: 6 (lower is better)
Translates to: FQQSCQASMYHS*CTSTIDSKKNI
Trigger: GATATTCTTCTTGCTGTCAATGGTAGAAGTACATCAGGAATGATACATGCTTGCTTGGCAAGACTGCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CAA 72 bp GAATGTATAATAGGCTTGTTGAACTTGGAATTTGATTaGCCTGCCGCTATATCCTCTCTTCCCTTTTCACAC +
Preference number: 6 (lower is better)
Translates to: ECIIGLLNLEFD*PAAISSLPFSH
Trigger: GTGTGAAAAGGGAAGAGAGGATATAGCGGCAGGCAAATCAAATTCCAAGTTCAACAAGCCTATTATACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511398.1
CDS CAA 90 bp AGTCTTGCCAAGCAAGCATGTATCATTCCTGATGTACTTCTACCATaGACAGCAAGAAGAATATCACCACATCTAATTCTTCCATCATTG +
Preference number: 6 (lower is better)
Translates to: SLAKQACIIPDVLLP*TARRISPHLILPSL
Trigger: CAATGATGGAAGAATTAGATGTGGTGATATTCTTCTTGCTGTCAATGGTAGAAGTACATCAGGAATGATACATGCTTGCTTGGCAAGACT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CAA 72 bp AAGCAAGCATGTATCATTCCTGATGTACTTCTACCATaGACAGCAAGAAGAATATCACCACATCTAATTCTT +
Preference number: 6 (lower is better)
Translates to: KQACIIPDVLLP*TARRISPHLIL
Trigger: AAGAATTAGATGTGGTGATATTCTTCTTGCTGTCAATGGTAGAAGTACATCAGGAATGATACATGCTTGCTT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263925.8
ENST00000306888.6
CDS CAA 72 bp TCTTCAAATACAATTGAAGAATGTATAATAGGCTTGTaGAACTTGGAATTTGATTTGCCTGCCGCTATATCC +
Preference number: 6 (lower is better)
Translates to: SSNTIEECIIGL*NLEFDLPAAIS
Trigger: GGATATAGCGGCAGGCAAATCAAATTCCAAGTTCAACAAGCCTATTATACATTCTTCAATTGTATTTGAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511398.1