Pregenerated sensors for LNCTAM34A (Homo sapiens)
Ensembl gene IDs: ENSG00000234546Ensembl transcript IDs: ENST00000412639.3, ENST00000634966.2, ENST00000635271.1, ENST00000657715.1, ENST00000664915.1, ENST00000665148.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCGGATCCCGGGCTGGAGAGACGCGTCGCGGCCCCGGGGCCTGGTaGCACGAGCAGGAAGGAGGACCCGGCGGCGGGCTCTGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PGSRAGETRRGPGAW*HEQEGGPGGGLCLG Trigger: GCCCAGGCAGAGCCCGCCGCCGGGTCCTCCTTCCTGCTCGTGCCACCAGGCCCCGGGGCCGCGACGCGTCTCTCCAGCCCGGGATCCGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | CCTGGTGGCACGAGCAGGAAGGAGGACCCGGCGGCGGGCTCTGCCTaGGCTTGCCTGGGCTTGTTCCGAGCCGGGCTGCTTCTCGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: PGGTSRKEDPAAGSA*ACLGLFRAGLLLGD Trigger: GTCACCGAGAAGCAGCCCGGCTCGGAACAAGCCCAGGCAAGCCCAGGCAGAGCCCGCCGCCGGGTCCTCCTTCCTGCTCGTGCCACCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | CGAGCAGGAAGGAGGACCCGGCGGCGGGCTCTGCCTGGGCTTGCCTaGGCTTGTTCCGAGCCGGGCTGCTTCTCGGTGACCACGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: RAGRRTRRRALPGLA*ACSEPGCFSVTTQI Trigger: GATCTGCGTGGTCACCGAGAAGCAGCCCGGCTCGGAACAAGCCCAGGCAAGCCCAGGCAGAGCCCGCCGCCGGGTCCTCCTTCCTGCTCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | CCTCTTTCCTTTTCAGGTGGAGGAGATGCCGCTGTCCCGTCGGTCTaGGGACAGCCCAGCTCCCCGGATCCCGGGCTGGAGAGACGCGTC | + |
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Preference number: 5 (lower is better) Translates to: PLSFSGGGDAAVPSV*GQPSSPDPGLERRV Trigger: GACGCGTCTCTCCAGCCCGGGATCCGGGGAGCTGGGCTGTCCCCAGACCGACGGGACAGCGGCATCTCCTCCACCTGAAAAGGAAAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412639.3 ENST00000635271.1 ENST00000657715.1 ENST00000664915.1 ENST00000665148.1 |
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| CDS GCA 90 bp | GCCCTGTGTGTTCTGCGGAGGCGCGGAGTGGAGGGGAGTGTTCGCTaGCCCGCCTTTGGGGGTCCAGCAGAGGTCCAAATCTCACGTCTG | + |
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Preference number: 5 (lower is better) Translates to: ALCVLRRRGVEGSVR*PAFGGPAEVQISRL Trigger: CAGACGTGAGATTTGGACCTCTGCTGGACCCCCAAAGGCGGGGCAGCGAACACTCCCCTCCACTCCGCGCCTCCGCAGAACACACAGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657715.1 |
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| CDS TCA 90 bp | TGCCTGGGCTTGCCTGGGCTTGTTCCGAGCCGGGCTGCTTCTCGGTaGCCACGCAGATCGGGGGCATTTGGAGATTTTGCGGGAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLGLPGLVPSRAASR*PRRSGAFGDFAGVL Trigger: CAGGACTCCCGCAAAATCTCCAAATGCCCCCGATCTGCGTGGTCACCGAGAAGCAGCCCGGCTCGGAACAAGCCCAGGCAAGCCCAGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 90 bp | GATTGGCAGCACGAACCCAGACAGGAGCCCTCATGGATCAGCCACTaGGGCTGGGTCGCATCCTTCCCCCTCCAGCCTTTCCCTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: DWQHEPRQEPSWISH*GWVASFPLQPFPLG Trigger: TCCCAAAGGGAAAGGCTGGAGGGGGAAGGATGCGACCCAGCCGCAGTGGCTGATCCATGAGGGCTCCTGTCTGGGTTCGTGCTGCCAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | GGGAATGCTACTGATTGGCAGCACGAACCCAGACAGGAGCCCTCATaGATCAGCCACTGCGGCTGGGTCGCATCCTTCCCCCTCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: GNATDWQHEPRQEPS*ISHCGWVASFPLQP Trigger: AGGCTGGAGGGGGAAGGATGCGACCCAGCCGCAGTGGCTGATCCATGAGGGCTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | CAGCACGAACCCAGACAGGAGCCCTCATGGATCAGCCACTGCGGCTaGGTCGCATCCTTCCCCCTCCAGCCTTTCCCTTTGGGATCTATC | + |
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Preference number: 5 (lower is better) Translates to: QHEPRQEPSWISHCG*VASFPLQPFPLGSI Trigger: GATAGATCCCAAAGGGAAAGGCTGGAGGGGGAAGGATGCGACCCAGCCGCAGTGGCTGATCCATGAGGGCTCCTGTCTGGGTTCGTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | AAGTCAGGCCTGGCGCCCACGTCTTGCCTGGGGAATGCTACTGATTaGCAGCACGAACCCAGACAGGAGCCCTCATGGATCAGCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: KSGLAPTSCLGNATD*QHEPRQEPSWISHC Trigger: GCAGTGGCTGATCCATGAGGGCTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCCCAGGCAAGACGTGGGCGCCAGGCCTGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 90 bp | TGCCTCGTGAGTCCAAGGAGAATCCGCCCTTTCGTTTTGCGCAGGTaGAGATCTCGCGGGCCCAGTTCGGAGTCCTGCAAACTGGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CLVSPRRIRPFVLRR*RSRGPSSESCKLVL Trigger: GAGGACCAGTTTGCAGGACTCCGAACTGGGCCCGCGAGATCTCCACCTGCGCAAAACGAAAGGGCGGATTCTCCTTGGACTCACGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412639.3 ENST00000635271.1 ENST00000657715.1 ENST00000664915.1 ENST00000665148.1 |
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| CDS CCA 90 bp | AGCCAACCTTGGGTTTCAAGTCAGGCCTGGCGCCCACGTCTTGCCTaGGGAATGCTACTGATTGGCAGCACGAACCCAGACAGGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SQPWVSSQAWRPRLA*GMLLIGSTNPDRSP Trigger: AGGGCTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCCCAGGCAAGACGTGGGCGCCAGGCCTGACTTGAAACCCAAGGTTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS TCA 90 bp | TTTCAAGTCAGGCCTGGCGCCCACGTCTTGCCTGGGGAATGCTACTaGTTGGCAGCACGAACCCAGACAGGAGCCCTCATGGATCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FQVRPGAHVLPGECY*LAARTQTGALMDQP Trigger: TGGCTGATCCATGAGGGCTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCCCAGGCAAGACGTGGGCGCCAGGCCTGACTTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 90 bp | TTGAAGCCAACCTTGGGTTTCAAGTCAGGCCTGGCGCCCACGTCTTaGCTGGGGAATGCTACTGATTGGCAGCACGAACCCAGACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LKPTLGFKSGLAPTS*LGNATDWQHEPRQE Trigger: CTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCCCAGGCAAGACGTGGGCGCCAGGCCTGACTTGAAACCCAAGGTTGGCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS TCA 90 bp | CCCAGGATGGATACAGCCTTAGGTTCCGTGTCCTGTTGCTGTTACTaGTGGCCGCAACTAATGACGGATGGCCACCTCTCCCGCCCTAGT | + |
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Preference number: 5 (lower is better) Translates to: PRMDTALGSVSCCCY*WPQLMTDGHLSRPS Trigger: ACTAGGGCGGGAGAGGTGGCCATCCGTCATTAGTTGCGGCCATCAGTAACAGCAACAGGACACGGAACCTAAGGCTGTATCCATCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS GCA 90 bp | GCTGGCAGTCTGGTGTCTCTAAAGCAGATTCATCCCACTGTTAGCTaGCCAGGTCCAGGCATTTTGGTGGCTCTGGGTAGCATTCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGSLVSLKQIHPTVS*PGPGILVALGSIRF Trigger: GAAGCGAATGCTACCCAGAGCCACCAAAATGCCTGGACCTGGGCAGCTAACAGTGGGATGAATCTGCTTTAGAGACACCAGACTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665148.1 |
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| CDS TCA 90 bp | GAACCAGGCCTTCTGAACCCACGGGGGCTCCACAGCTGTTGCTTCTaGATGCTCAGGCATCTGATCTGCCGTTGTTATCTGATAGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: EPGLLNPRGLHSCCF*MLRHLICRCYLIGS Trigger: TGAACCTATCAGATAACAACGGCAGATCAGATGCCTGAGCATTCAGAAGCAACAGCTGTGGAGCCCCCGTGGGTTCAGAAGGCCTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS GCA 90 bp | TTATTGAGGGTTCCACTGATGCCAGCATTTCTACAGCCTTCTCCATaGCAGGACCTCAAAGCCCAGGCAAGGAATTCTATTCAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: LLRVPLMPAFLQPSP*QDLKAQARNSIQPT Trigger: GGTGGGCTGAATAGAATTCCTTGCCTGGGCTTTGAGGTCCTGGCATGGAGAAGGCTGTAGAAATGCTGGCATCAGTGGAACCCTCAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS GCA 90 bp | GTTTCCGTGCATTATGATGAAAATGCAGGAGTTTCTCTCTGTGCCTaGTGTGTTTGTGAAATGGTGCCCTGTGTGTTCTGCGGAGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: VSVHYDENAGVSLCA*CVCEMVPCVFCGGA Trigger: CGCGCCTCCGCAGAACACACAGGGCACCATTTCACAAACACAGCAGGCACAGAGAGAAACTCCTGCATTTTCATCATAATGCACGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657715.1 |
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| CDS GCA 90 bp | CTGGATGCATCTCACTTCTCTGGGCTTGAGGTCAGGGGGTTTCCGTaGATTATGATGAAAATGCAGGAGTTTCTCTCTGTGCCTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LDASHFSGLEVRGFP*IMMKMQEFLSVPAV Trigger: CACAGCAGGCACAGAGAGAAACTCCTGCATTTTCATCATAATGCACGGAAACCCCCTGACCTCAAGCCCAGAGAAGTGAGATGCATCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657715.1 |
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| CDS CCA 90 bp | GACCTCAAAGCCCAGGCAAGGAATTCTATTCAGCCCACCTTTCAGTaGGTGACCCTTTCTCCTATAGACCAATTCCTATACCCTGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: DLKAQARNSIQPTFQ*VTLSPIDQFLYPAG Trigger: GCCAGCAGGGTATAGGAATTGGTCTATAGGAGAAAGGGTCACCCACTGAAAGGTGGGCTGAATAGAATTCCTTGCCTGGGCTTTGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS TCA 90 bp | CGAGCCAGTATACTGAGACATCAGGTGGTAGACTGTTTTGGATGCTaGGATCCAGCAGTGGACAAAACTAAGCCATGCCCACATGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RASILRHQVVDCFGC*DPAVDKTKPCPHAA Trigger: AGCTGCATGTGGGCATGGCTTAGTTTTGTCCACTGCTGGATCTCAGCATCCAAAACAGTCTACCACCTGATGTCTCAGTATACTGGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634966.2 ENST00000664915.1 |
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| CDS GCA 90 bp | CAGCCTTTCCCTTTGGGATCTATCTCTGTGTCCTTGTTCGGGACTTaGTGTTCACAGTCTCAGTGCACTTTTGTGTCCAGTGAGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: QPFPLGSISVSLFGT*CSQSQCTFVSSEFP Trigger: AGGGAACTCACTGGACACAAAAGTGCACTGAGACTGTGAACAGCAAGTCCCGAACAAGGACACAGAGATAGATCCCAAAGGGAAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | AGGAAGGAGGACCCGGCGGCGGGCTCTGCCTGGGCTTGCCTGGGCTaGTTCCGAGCCGGGCTGCTTCTCGGTGACCACGCAGATCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RKEDPAAGSAWACLG*FRAGLLLGDHADRG Trigger: CCCCCGATCTGCGTGGTCACCGAGAAGCAGCCCGGCTCGGAACAAGCCCAGGCAAGCCCAGGCAGAGCCCGCCGCCGGGTCCTCCTTCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | GCAGCCAAGCTCCGGGGCAGGAGAGGCCTGGAAGCCTaGACTACCTGCTCGCCCCGTCCCAGCATGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: AAKLRGRRGLEA*TTCSPRPSMHP Trigger: TGGGTGCATGCTGGGACGGGGCGAGCAGGTAGTGCAGGCTTCCAGGCCTCTCCTGCCCCGGAGCTTGGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 72 bp | TTTTCAGGTGGAGGAGATGCCGCTGTCCCGTCGGTCTaGGGACAGCCCAGCTCCCCGGATCCCGGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FSGGGDAAVPSV*GQPSSPDPGLE Trigger: CTCCAGCCCGGGATCCGGGGAGCTGGGCTGTCCCCAGACCGACGGGACAGCGGCATCTCCTCCACCTGAAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412639.3 ENST00000635271.1 ENST00000657715.1 ENST00000664915.1 ENST00000665148.1 |
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| CDS GCA 72 bp | GTTCTGCGGAGGCGCGGAGTGGAGGGGAGTGTTCGCTaGCCCGCCTTTGGGGGTCCAGCAGAGGTCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: VLRRRGVEGSVR*PAFGGPAEVQI Trigger: GATTTGGACCTCTGCTGGACCCCCAAAGGCGGGGCAGCGAACACTCCCCTCCACTCCGCGCCTCCGCAGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657715.1 |
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| CDS CAA 90 bp | GGGCTGCTTCTCGGTGACCACGCAGATCGGGGGCATTTGGAGATTTaGCGGGAGTCCTGCAGCCAAGCTCCGGGGCAGGAGAGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLLLGDHADRGHLEI*RESCSQAPGQERPG Trigger: TCCAGGCCTCTCCTGCCCCGGAGCTTGGCTGCAGGACTCCCGCAAAATCTCCAAATGCCCCCGATCTGCGTGGTCACCGAGAAGCAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | CACGAACCCAGACAGGAGCCCTCATGGATCAGCCACTaGGGCTGGGTCGCATCCTTCCCCCTCCAGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: HEPRQEPSWISH*GWVASFPLQPF Trigger: GAAAGGCTGGAGGGGGAAGGATGCGACCCAGCCGCAGTGGCTGATCCATGAGGGCTCCTGTCTGGGTTCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 72 bp | CCCAGACAGGAGCCCTCATGGATCAGCCACTGCGGCTaGGTCGCATCCTTCCCCCTCCAGCCTTTCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PRQEPSWISHCG*VASFPLQPFPL Trigger: CAAAGGGAAAGGCTGGAGGGGGAAGGATGCGACCCAGCCGCAGTGGCTGATCCATGAGGGCTCCTGTCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 72 bp | CTCGGTGACCACGCAGATCGGGGGCATTTGGAGATTTaGCGGGAGTCCTGCAGCCAAGCTCCGGGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGDHADRGHLEI*RESCSQAPGQE Trigger: CTCCTGCCCCGGAGCTTGGCTGCAGGACTCCCGCAAAATCTCCAAATGCCCCCGATCTGCGTGGTCACCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS TCA 72 bp | AGGCCTGGCGCCCACGTCTTGCCTGGGGAATGCTACTaGTTGGCAGCACGAACCCAGACAGGAGCCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: RPGAHVLPGECY*LAARTQTGALM Trigger: CATGAGGGCTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCCCAGGCAAGACGTGGGCGCCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | GCCTGCTGTGTTTGTGAAATGGTGCCCTGTGTGTTCTaGGGAGGCGCGGAGTGGAGGGGAGTGTTCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ACCVCEMVPCVF*GGAEWRGVFAA Trigger: GGCAGCGAACACTCCCCTCCACTCCGCGCCTCCGCAGAACACACAGGGCACCATTTCACAAACACAGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657715.1 |
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| CDS CAA 72 bp | GGGCTGCTTCTCGGTGACCACGCAGATCGGGGGCATTaGGAGATTTTGCGGGAGTCCTGCAGCCAAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GLLLGDHADRGH*EILRESCSQAP Trigger: CGGAGCTTGGCTGCAGGACTCCCGCAAAATCTCCAAATGCCCCCGATCTGCGTGGTCACCGAGAAGCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | GGGAGCGGTTGCCTCGTGAGTCCAAGGAGAATCCGCCCTTTCGTTTaGCGCAGGTGGAGATCTCGCGGGCCCAGTTCGGAGTCCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GSGCLVSPRRIRPFV*RRWRSRGPSSESCK Trigger: TTTGCAGGACTCCGAACTGGGCCCGCGAGATCTCCACCTGCGCAAAACGAAAGGGCGGATTCTCCTTGGACTCACGAGGCAACCGCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412639.3 ENST00000635271.1 ENST00000657715.1 ENST00000664915.1 ENST00000665148.1 |
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| CDS TCA 72 bp | TTGCCTGGGCTTGTTCCGAGCCGGGCTGCTTCTCGGTaGCCACGCAGATCGGGGGCATTTGGAGATTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LPGLVPSRAASR*PRRSGAFGDFA Trigger: CGCAAAATCTCCAAATGCCCCCGATCTGCGTGGTCACCGAGAAGCAGCCCGGCTCGGAACAAGCCCAGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CCA 72 bp | CTGGCGCCCACGTCTTGCCTGGGGAATGCTACTGATTaGCAGCACGAACCCAGACAGGAGCCCTCATGGATC | + |
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Preference number: 6 (lower is better) Translates to: LAPTSCLGNATD*QHEPRQEPSWI Trigger: GATCCATGAGGGCTCCTGTCTGGGTTCGTGCTGCCAATCAGTAGCATTCCCCAGGCAAGACGTGGGCGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 72 bp | TGCCTCGTGAGTCCAAGGAGAATCCGCCCTTTCGTTTaGCGCAGGTGGAGATCTCGCGGGCCCAGTTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: CLVSPRRIRPFV*RRWRSRGPSSE Trigger: CTCCGAACTGGGCCCGCGAGATCTCCACCTGCGCAAAACGAAAGGGCGGATTCTCCTTGGACTCACGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412639.3 ENST00000635271.1 ENST00000657715.1 ENST00000664915.1 ENST00000665148.1 |
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| CDS CAA 90 bp | TCCCTGGGGGCCCAGGATGGATACAGCCTTAGGTTCCGTGTCCTGTaGCTGTTACTGATGGCCGCAACTAATGACGGATGGCCACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLGAQDGYSLRFRVL*LLLMAATNDGWPPL Trigger: GAGAGGTGGCCATCCGTCATTAGTTGCGGCCATCAGTAACAGCAACAGGACACGGAACCTAAGGCTGTATCCATCCTGGGCCCCCAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 90 bp | AGCCACTGCGGCTGGGTCGCATCCTTCCCCCTCCAGCCTTTCCCTTaGGGATCTATCTCTGTGTCCTTGTTCGGGACTTGCTGTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SHCGWVASFPLQPFP*GSISVSLFGTCCSQ Trigger: CTGTGAACAGCAAGTCCCGAACAAGGACACAGAGATAGATCCCAAAGGGAAAGGCTGGAGGGGGAAGGATGCGACCCAGCCGCAGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | TGCCCCGCCTTTGGGGGTCCAGCAGAGGTCCAAATCTCACGTCTGTaGCTTACACACTGTAGGACCTGGGTAGCATTCGCTTCCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: CPAFGGPAEVQISRL*LTHCRTWVAFASLS Trigger: GGACAGGGAAGCGAATGCTACCCAGGTCCTACAGTGTGTAAGCAACAGACGTGAGATTTGGACCTCTGCTGGACCCCCAAAGGCGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657715.1 |
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| CDS CCA 72 bp | AGTCCAAGGAGAATCCGCCCTTTCGTTTTGCGCAGGTaGAGATCTCGCGGGCCCAGTTCGGAGTCCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SPRRIRPFVLRR*RSRGPSSESCK Trigger: TTTGCAGGACTCCGAACTGGGCCCGCGAGATCTCCACCTGCGCAAAACGAAAGGGCGGATTCTCCTTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412639.3 ENST00000635271.1 ENST00000657715.1 ENST00000664915.1 ENST00000665148.1 |
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| CDS CAA 72 bp | ACCAGGCCTTCTGAACCCACGGGGGCTCCACAGCTGTaGCTTCTGAATGCTCAGGCATCTGATCTGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: TRPSEPTGAPQL*LLNAQASDLPL Trigger: CAACGGCAGATCAGATGCCTGAGCATTCAGAAGCAACAGCTGTGGAGCCCCCGTGGGTTCAGAAGGCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 72 bp | GGCTGGGTCGCATCCTTCCCCCTCCAGCCTTTCCCTTaGGGATCTATCTCTGTGTCCTTGTTCGGGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: GWVASFPLQPFP*GSISVSLFGTC Trigger: GCAAGTCCCGAACAAGGACACAGAGATAGATCCCAAAGGGAAAGGCTGGAGGGGGAAGGATGCGACCCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | GAGACGGGAACCAGGCCTTCTGAACCCACGGGGGCTCCACAGCTGTaGCTTCTGAATGCTCAGGCATCTGATCTGCCGTTGTTATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ETGTRPSEPTGAPQL*LLNAQASDLPLLSD Trigger: ATCAGATAACAACGGCAGATCAGATGCCTGAGCATTCAGAAGCAACAGCTGTGGAGCCCCCGTGGGTTCAGAAGGCCTGGTTCCCGTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 90 bp | TCCTTTGGCTTCAGGGAGGGGAAGAGTTGCCTTCTTCGCAACTCCTaGTACGTAGGAACAAGAAGCCAAAGTAGTGGGCCCAGGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SFGFREGKSCLLRNS*YVGTRSQSSGPRRE Trigger: CTCCCTCCTGGGCCCACTACTTTGGCTTCTTGTTCCTACGTACAAGGAGTTGCGAAGAAGGCAACTCTTCCCCTCCCTGAAGCCAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS TCA 72 bp | GATACAGCCTTAGGTTCCGTGTCCTGTTGCTGTTACTaGTGGCCGCAACTAATGACGGATGGCCACCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DTALGSVSCCCY*WPQLMTDGHLS Trigger: GGAGAGGTGGCCATCCGTCATTAGTTGCGGCCATCAGTAACAGCAACAGGACACGGAACCTAAGGCTGTATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 72 bp | GCCCAGGATGGATACAGCCTTAGGTTCCGTGTCCTGTaGCTGTTACTGATGGCCGCAACTAATGACGGATGG | + |
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Preference number: 6 (lower is better) Translates to: AQDGYSLRFRVL*LLLMAATNDGW Trigger: CCATCCGTCATTAGTTGCGGCCATCAGTAACAGCAACAGGACACGGAACCTAAGGCTGTATCCATCCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 72 bp | TTCAGGGAGGGGAAGAGTTGCCTTCTTCGCAACTCCTaGTACGTAGGAACAAGAAGCCAAAGTAGTGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FREGKSCLLRNS*YVGTRSQSSGP Trigger: GGGCCCACTACTTTGGCTTCTTGTTCCTACGTACAAGGAGTTGCGAAGAAGGCAACTCTTCCCCTCCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 72 bp | TGGGAGGGGATGGTTACTGTTCCCCTCCATGGGCCTTaGTCTCTAAGAGATGAGCACTTCCTTAGTACCGCT | + |
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Preference number: 6 (lower is better) Translates to: WEGMVTVPLHGP*SLRDEHFLSTA Trigger: AGCGGTACTAAGGAAGTGCTCATCTCTTAGAGACAAAGGCCCATGGAGGGGAACAGTAACCATCCCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 90 bp | GCTCCACAGCTGTTGCTTCTGAATGCTCAGGCATCTGATCTGCCGTaGTTATCTGATAGGTTCATTTGCCCGATGTGCCGCGAGCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: APQLLLLNAQASDLP*LSDRFICPMCREPV Trigger: TACTGGCTCGCGGCACATCGGGCAAATGAACCTATCAGATAACAACGGCAGATCAGATGCCTGAGCATTCAGAAGCAACAGCTGTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 90 bp | TTTCTGAATTGGGAGGGGATGGTTACTGTTCCCCTCCATGGGCCTTaGTCTCTAAGAGATGAGCACTTCCTTAGTACCGCTCCCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: FLNWEGMVTVPLHGP*SLRDEHFLSTAPAD Trigger: ATCAGCGGGAGCGGTACTAAGGAAGTGCTCATCTCTTAGAGACAAAGGCCCATGGAGGGGAACAGTAACCATCCCCTCCCAATTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS GCA 72 bp | GTTCCACTGATGCCAGCATTTCTACAGCCTTCTCCATaGCAGGACCTCAAAGCCCAGGCAAGGAATTCTATT | + |
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Preference number: 6 (lower is better) Translates to: VPLMPAFLQPSP*QDLKAQARNSI Trigger: AATAGAATTCCTTGCCTGGGCTTTGAGGTCCTGGCATGGAGAAGGCTGTAGAAATGCTGGCATCAGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 72 bp | CTGTTGCTTCTGAATGCTCAGGCATCTGATCTGCCGTaGTTATCTGATAGGTTCATTTGCCCGATGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LLLLNAQASDLP*LSDRFICPMCR Trigger: GCGGCACATCGGGCAAATGAACCTATCAGATAACAACGGCAGATCAGATGCCTGAGCATTCAGAAGCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412639.3 ENST00000634966.2 ENST00000657715.1 ENST00000664915.1 |
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| CDS CAA 72 bp | CCCTTTGGGATCTATCTCTGTGTCCTTGTTCGGGACTaGCTGTTCACAGTCTCAGTGCACTTTTGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PFGIYLCVLVRD*LFTVSVHFCVQ Trigger: CTGGACACAAAAGTGCACTGAGACTGTGAACAGCAAGTCCCGAACAAGGACACAGAGATAGATCCCAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | CTCAGAGATGAATTGCTGCGGTTATCCAGAAGACAGCCCATTTTCTaGTACCAGGAGATGACCTCTCTTCTGGGTAGCATTCGCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LRDELLRLSRRQPIF*YQEMTSLLGSIRFP Trigger: AGGGAAGCGAATGCTACCCAGAAGAGAGGTCATCTCCTGGTACAAGAAAATGGGCTGTCTTCTGGATAACCGCAGCAATTCATCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | GTGTCCTTGTTCGGGACTTGCTGTTCACAGTCTCAGTaGACTTTTGTGTCCAGTGAGTTCCCTCTTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VSLFGTCCSQSQ*TFVSSEFPLFS Trigger: AGAGAAAAGAGGGAACTCACTGGACACAAAAGTGCACTGAGACTGTGAACAGCAAGTCCCGAACAAGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | CCTTTGGGATCTATCTCTGTGTCCTTGTTCGGGACTTaGTGTTCACAGTCTCAGTGCACTTTTGTGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PLGSISVSLFGT*CSQSQCTFVSS Trigger: ACTGGACACAAAAGTGCACTGAGACTGTGAACAGCAAGTCCCGAACAAGGACACAGAGATAGATCCCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | CTGTGTCCTTGTTCGGGACTTGCTGTTCACAGTCTCAGTGCACTTTaGTGTCCAGTGAGTTCCCTCTTTTCTCTCAAATGGTTCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LCPCSGLAVHSLSAL*CPVSSLFSLKWFHL Trigger: CAAGTGGAACCATTTGAGAGAAAAGAGGGAACTCACTGGACACAAAAGTGCACTGAGACTGTGAACAGCAAGTCCCGAACAAGGACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS TCA 72 bp | ATACTGAGACATCAGGTGGTAGACTGTTTTGGATGCTaGGATCCAGCAGTGGACAAAACTAAGCCATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ILRHQVVDCFGC*DPAVDKTKPCP Trigger: TGGGCATGGCTTAGTTTTGTCCACTGCTGGATCTCAGCATCCAAAACAGTCTACCACCTGATGTCTCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634966.2 ENST00000664915.1 |
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| CDS CAA 72 bp | GAATTGCTGCGGTTATCCAGAAGACAGCCCATTTTCTaGTACCAGGAGATGACCTCTCTTCTGGGTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: ELLRLSRRQPIF*YQEMTSLLGSI Trigger: AATGCTACCCAGAAGAGAGGTCATCTCCTGGTACAAGAAAATGGGCTGTCTTCTGGATAACCGCAGCAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | ATACTAATGACCTTCAGCTACTCAGAGATGAATTGCTaGGGTTATCCAGAAGACAGCCCATTTTCTTGTACC | + |
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Preference number: 6 (lower is better) Translates to: ILMTFSYSEMNC*GYPEDSPFSCT Trigger: GGTACAAGAAAATGGGCTGTCTTCTGGATAACCGCAGCAATTCATCTCTGAGTAGCTGAAGGTCATTAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS GCA 72 bp | TGCATACTAATGACCTTCAGCTACTCAGAGATGAATTaGTGCGGTTATCCAGAAGACAGCCCATTTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CILMTFSYSEMN*CGYPEDSPFSC Trigger: ACAAGAAAATGGGCTGTCTTCTGGATAACCGCAGCAATTCATCTCTGAGTAGCTGAAGGTCATTAGTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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| CDS CAA 90 bp | ACTTGTATAATGCATACTAATGACCTTCAGCTACTCAGAGATGAATaGCTGCGGTTATCCAGAAGACAGCCCATTTTCTTGTACCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TCIMHTNDLQLLRDE*LRLSRRQPIFLYQE Trigger: CTCCTGGTACAAGAAAATGGGCTGTCTTCTGGATAACCGCAGCAATTCATCTCTGAGTAGCTGAAGGTCATTAGTATGCATTATACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635271.1 |
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