Pregenerated sensors for LNCOG (Homo sapiens)
Ensembl gene IDs: ENSG00000257219Ensembl transcript IDs: ENST00000550380.6, ENST00000553247.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGATGTTCCTTGAGCTGGTTGGTCTGAGGACCCGAGGTCGTAGGTaGGTCTCCTCACAGAGTGAGGGCAAGGACAGCGGACTGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: EMFLELVGLRTRGRR*VSSQSEGKDSGLVP Trigger: GGGGACCAGTCCGCTGTCCTTGCCCTCACTCTGTGAGGAGACCCACCTACGACCTCGGGTCCTCAGACCAACCAGCTCAAGGAACATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 90 bp | GTCGTAGGTGGGTCTCCTCACAGAGTGAGGGCAAGGACAGCGGACTaGTCCCCCAAAGGAGTCTCTCTGACCTGGGTCTTCAGCACCAAA | + |
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Preference number: 5 (lower is better) Translates to: VVGGSPHRVRARTAD*SPKGVSLTWVFSTK Trigger: TTTGGTGCTGAAGACCCAGGTCAGAGAGACTCCTTTGGGGGACCAGTCCGCTGTCCTTGCCCTCACTCTGTGAGGAGACCCACCTACGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 90 bp | TGCTGTTCTTCTGGAAGAAAGGGAGAATGGCCTTTGGTGAATTCATaGCAGGCTCCACTTCACTGTCGGTCTCCCTCTATGGGACCCTGG | + |
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Preference number: 5 (lower is better) Translates to: CCSSGRKGEWPLVNS*QAPLHCRSPSMGPW Trigger: CCAGGGTCCCATAGAGGGAGACCGACAGTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGAAGAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS TCA 90 bp | AGTGATACAGAAGTTTATTTCACCCTCACACAACAGTCTTCGGGGTaGGTGGCCCAGGTGGGTGAGATGACTCCACATGGCCACATAGGG | + |
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Preference number: 5 (lower is better) Translates to: SDTEVYFTLTQQSSG*VAQVGEMTPHGHIG Trigger: CCCTATGTGGCCATGTGGAGTCATCTCACCCACCTGGGCCACTCACCCCGAAGACTGTTGTGTGAGGGTGAAATAAACTTCTGTATCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS GCA 90 bp | TGGTGTGCAGGGGATAGGGTATGGGTGCTGCTGATTGGTTTGGGATaGAATCATAAGGGTGTGGAAAACAGTCCTCATGCACTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: WCAGDRVWVLLIGLG*NHKGVENSPHALSP Trigger: TGGACTCAGTGCATGAGGACTGTTTTCCACACCCTTATGATTGCATCCCAAACCAATCAGCAGCACCCATACCCTATCCCCTGCACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 90 bp | GCCATAGGCCCAGCTAAATGCTGTTCTTCTGGAAGAAAGGGAGAATaGCCTTTGGTGAATTCATGGCAGGCTCCACTTCACTGTCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: AIGPAKCCSSGRKGE*PLVNSWQAPLHCRS Trigger: AGACCGACAGTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGAAGAACAGCATTTAGCTGGGCCTATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS TCA 90 bp | CAGCTAAATGCTGTTCTTCTGGAAGAAAGGGAGAATGGCCTTTGGTaGATTCATGGCAGGCTCCACTTCACTGTCGGTCTCCCTCTATGG | + |
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Preference number: 5 (lower is better) Translates to: QLNAVLLEERENGLW*IHGRLHFTVGLPLW Trigger: CCATAGAGGGAGACCGACAGTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGAAGAACAGCATTTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS TCA 90 bp | GGAAACTCCAGACACCTTCACTGTAAGAGTTATCCAAAGTGTCTGTaGTGGTCCTATAGGCTTCCCAGGCAATCAAGCAGTGTCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GNSRHLHCKSYPKCL*WSYRLPRQSSSVSL Trigger: AAGACTGACACTGCTTGATTGCCTGGGAAGCCTATAGGACCATCACAGACACTTTGGATAACTCTTACAGTGAAGGTGTCTGGAGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553247.2 |
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| CDS CCA 90 bp | AATCTCACCAAAGAATCAGAGGTTAGGAGTTTCTCAAAGATAGTTTaGTGTGCAGGGGATAGGGTATGGGTGCTGCTGATTGGTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: NLTKESEVRSFSKIV*CAGDRVWVLLIGLG Trigger: TCCCAAACCAATCAGCAGCACCCATACCCTATCCCCTGCACACCAAACTATCTTTGAGAAACTCCTAACCTCTGATTCTTTGGTGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 90 bp | CCAGGAATGAGCCAAGACAGCCAACCTGTGAGGCTAAAAGCAAGATaGAGTCTGCCATGTCCAATTTCTCTTATTGCCATAATTTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: PGMSQDSQPVRLKAR*SLPCPISLIAIILQ Trigger: TTGCAAAATTATGGCAATAAGAGAAATTGGACATGGCAGACTCCATCTTGCTTTTAGCCTCACAGGTTGGCTGTCTTGGCTCATTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS GCA 90 bp | GAGGCTAAAAGCAAGATGGAGTCTGCCATGTCCAATTTCTCTTATTaGCATAATTTTGCAAAGGTGGTTTCATCTCCATCCATTGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: EAKSKMESAMSNFSY*HNFAKVVSSPSIVN Trigger: GTTGACAATGGATGGAGATGAAACCACCTTTGCAAAATTATGGCAATAAGAGAAATTGGACATGGCAGACTCCATCTTGCTTTTAGCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 90 bp | AGTCTGCCATGTCCAATTTCTCTTATTGCCATAATTTTGCAAAGGTaGTTTCATCTCCATCCATTGTCAACTTACAAGGGAAAAACAGCA | + |
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Preference number: 5 (lower is better) Translates to: SLPCPISLIAIILQR*FHLHPLSTYKGKTA Trigger: TGCTGTTTTTCCCTTGTAAGTTGACAATGGATGGAGATGAAACCACCTTTGCAAAATTATGGCAATAAGAGAAATTGGACATGGCAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS TCA 90 bp | CCATCCATTGTCAACTTACAAGGGAAAAACAGCATCATTTTTCTCTaGTTTCCTCAACAATGCAAGAAGTTCATGTGTATCAGACATTTA | + |
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Preference number: 5 (lower is better) Translates to: PSIVNLQGKNSIIFL*FPQQCKKFMCIRHL Trigger: TAAATGTCTGATACACATGAACTTCTTGCATTGTTGAGGAAATCAGAGAAAAATGATGCTGTTTTTCCCTTGTAAGTTGACAATGGATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS GCA 72 bp | GCCTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTaGCGGGTGAGTTGGACAGTCCATTTTCCAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALGQSSRGSGSG*RVSWTVHFPVG Trigger: CCCCACTGGAAAATGGACTGTCCAACTCACCCGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | CCGAGAAGATCTGGGAAGGAGTCAGTCAGAGAGCCTTaGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PRRSGKESVREP*ARVPGALGVAA Trigger: GGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGCTCTCTGACTGACTCCTTCCCAGATCTTCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | GGGTCTCCTCACAGAGTGAGGGCAAGGACAGCGGACTaGTCCCCCAAAGGAGTCTCTCTGACCTGGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSPHRVRARTAD*SPKGVSLTWVF Trigger: GAAGACCCAGGTCAGAGAGACTCCTTTGGGGGACCAGTCCGCTGTCCTTGCCCTCACTCTGTGAGGAGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | CTTGAGCTGGTTGGTCTGAGGACCCGAGGTCGTAGGTaGGTCTCCTCACAGAGTGAGGGCAAGGACAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: LELVGLRTRGRR*VSSQSEGKDSG Trigger: TCCGCTGTCCTTGCCCTCACTCTGTGAGGAGACCCACCTACGACCTCGGGTCCTCAGACCAACCAGCTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | GAGAGCCTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTaGCTGCCGGGTGAGTTGGACAGTCCATTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ESLGPEFQGLWE*LPGELDSPFSS Trigger: ACTGGAAAATGGACTGTCCAACTCACCCGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | CAGTCAGAGAGCCTTGGGCCAGAGTTCCAGGGGCTCTaGGAGTGGCTGCCGGGTGAGTTGGACAGTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: QSESLGPEFQGL*EWLPGELDSPF Trigger: AAATGGACTGTCCAACTCACCCGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGCTCTCTGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS TCA 72 bp | CAAGGACAGCGGACTGGTCCCCCAAAGGAGTCTCTCTaGCCTGGGTCTTCAGCACCAAATGTCACGCATGTC | + |
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Preference number: 6 (lower is better) Translates to: QGQRTGPPKESL*PGSSAPNVTHV Trigger: GACATGCGTGACATTTGGTGCTGAAGACCCAGGTCAGAGAGACTCCTTTGGGGGACCAGTCCGCTGTCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 90 bp | GGGTCCAAGTTGTTCCATCTTGTTTCTCCACCTTCCCCTAGGGCCTaGTCCTTTGCTGCACAAAGTCGGGCTGCAGACACAGCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSKLFHLVSPPSPRA*SFAAQSRAADTAMF Trigger: GAACATGGCTGTGTCTGCAGCCCGACTTTGTGCAGCAAAGGACAAGGCCCTAGGGGAAGGTGGAGAAACAAGATGGAACAACTTGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS TCA 72 bp | GAAGTTTATTTCACCCTCACACAACAGTCTTCGGGGTaGGTGGCCCAGGTGGGTGAGATGACTCCACATGGC | + |
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Preference number: 6 (lower is better) Translates to: EVYFTLTQQSSG*VAQVGEMTPHG Trigger: GCCATGTGGAGTCATCTCACCCACCTGGGCCACTCACCCCGAAGACTGTTGTGTGAGGGTGAAATAAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | ACAGCGGACTGGTCCCCCAAAGGAGTCTCTCTGACCTaGGTCTTCAGCACCAAATGTCACGCATGTCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: TADWSPKGVSLT*VFSTKCHACRF Trigger: AAAACGACATGCGTGACATTTGGTGCTGAAGACCCAGGTCAGAGAGACTCCTTTGGGGGACCAGTCCGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 72 bp | ATCTTGTTTCTCCACCTTCCCCTAGGGCCTTGTCCTTaGCTGCACAAAGTCGGGCTGCAGACACAGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: ILFLHLPLGPCP*LHKVGLQTQPC Trigger: ACATGGCTGTGTCTGCAGCCCGACTTTGTGCAGCAAAGGACAAGGCCCTAGGGGAAGGTGGAGAAACAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | TGCATACATCACTTCCACTTACATTCCACTGTCACGTaGCCACACCTGGCCACAAGGGTGACTAAGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CIHHFHLHSTVT*PHLATRVTKRC Trigger: GCACCTCTTAGTCACCCTTGTGGCCAGGTGTGGCCACGTGACAGTGGAATGTAAGTGGAAGTGATGTATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 72 bp | TTGTTCCATCTTGTTTCTCCACCTTCCCCTAGGGCCTaGTCCTTTGCTGCACAAAGTCGGGCTGCAGACACA | + |
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Preference number: 6 (lower is better) Translates to: LFHLVSPPSPRA*SFAAQSRAADT Trigger: TGTGTCTGCAGCCCGACTTTGTGCAGCAAAGGACAAGGCCCTAGGGGAAGGTGGAGAAACAAGATGGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 72 bp | CATGGCCACATAGGGATCCAAGTTGTTGGGTCCAAGTaGTTCCATCTTGTTTCTCCACCTTCCCCTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HGHIGIQVVGSK*FHLVSPPSPRA Trigger: GGCCCTAGGGGAAGGTGGAGAAACAAGATGGAACAACTTGGACCCAACAACTTGGATCCCTATGTGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 90 bp | GGCCCAGCTAAATGCTGTTCTTCTGGAAGAAAGGGAGAATGGCCTTaGGTGAATTCATGGCAGGCTCCACTTCACTGTCGGTCTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPAKCCSSGRKGEWP*VNSWQAPLHCRSPS Trigger: AGAGGGAGACCGACAGTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGAAGAACAGCATTTAGCTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 90 bp | AGTTGTTCCATCTTGTTTCTCCACCTTCCCCTAGGGCCTTGTCCTTaGCTGCACAAAGTCGGGCTGCAGACACAGCCATGTTCCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: SCSILFLHLPLGPCP*LHKVGLQTQPCSHS Trigger: TGAATGGGAACATGGCTGTGTCTGCAGCCCGACTTTGTGCAGCAAAGGACAAGGCCCTAGGGGAAGGTGGAGAAACAAGATGGAACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS TCA 72 bp | GCTGTTCTTCTGGAAGAAAGGGAGAATGGCCTTTGGTaGATTCATGGCAGGCTCCACTTCACTGTCGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AVLLEERENGLW*IHGRLHFTVGL Trigger: GAGACCGACAGTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGAAGAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS GCA 72 bp | TGGATGAAGGCTATAGGACTGGTTGAGTCACGGGTCTaGGTGGGGCCATCTAGTTGTCAGAAATGCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: WMKAIGLVESRV*VGPSSCQKCKR Trigger: CCTTTTGCATTTCTGACAACTAGATGGCCCCACGCAGACCCGTGACTCAACCAGTCCTATAGCCTTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 72 bp | TCTGGAAGAAAGGGAGAATGGCCTTTGGTGAATTCATaGCAGGCTCCACTTCACTGTCGGTCTCCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: SGRKGEWPLVNS*QAPLHCRSPSM Trigger: CATAGAGGGAGACCGACAGTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 90 bp | ATGACTCCACATGGCCACATAGGGATCCAAGTTGTTGGGTCCAAGTaGTTCCATCTTGTTTCTCCACCTTCCCCTAGGGCCTTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: MTPHGHIGIQVVGSK*FHLVSPPSPRALSF Trigger: AAAGGACAAGGCCCTAGGGGAAGGTGGAGAAACAAGATGGAACAACTTGGACCCAACAACTTGGATCCCTATGTGGCCATGTGGAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CAA 72 bp | TGTGCAGGGGATAGGGTATGGGTGCTGCTGATTGGTTaGGGATGCAATCATAAGGGTGTGGAAAACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CAGDRVWVLLIG*GCNHKGVENSP Trigger: AGGACTGTTTTCCACACCCTTATGATTGCATCCCAAACCAATCAGCAGCACCCATACCCTATCCCCTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CAA 90 bp | ATAGTTTGGTGTGCAGGGGATAGGGTATGGGTGCTGCTGATTGGTTaGGGATGCAATCATAAGGGTGTGGAAAACAGTCCTCATGCACTG | + |
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Preference number: 6 (lower is better) Translates to: IVWCAGDRVWVLLIG*GCNHKGVENSPHAL Trigger: CAGTGCATGAGGACTGTTTTCCACACCCTTATGATTGCATCCCAAACCAATCAGCAGCACCCATACCCTATCCCCTGCACACCAAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 72 bp | CCAGCTAAATGCTGTTCTTCTGGAAGAAAGGGAGAATaGCCTTTGGTGAATTCATGGCAGGCTCCACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PAKCCSSGRKGE*PLVNSWQAPLH Trigger: GTGAAGTGGAGCCTGCCATGAATTCACCAAAGGCCATTCTCCCTTTCTTCCAGAAGAACAGCATTTAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550380.6 ENST00000553247.2 |
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| CDS CCA 72 bp | ATAGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTaGAAGGCAAACGAAAAGAGAGGCAAGACTTACATG | + |
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Preference number: 6 (lower is better) Translates to: IAGEASGNLQSW*KANEKRGKTYM Trigger: CATGTAAGTCTTGCCTCTCTTTTCGTTTGCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553247.2 |
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| CDS CCA 72 bp | AGCCAAGACAGCCAACCTGTGAGGCTAAAAGCAAGATaGAGTCTGCCATGTCCAATTTCTCTTATTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: SQDSQPVRLKAR*SLPCPISLIAI Trigger: TATGGCAATAAGAGAAATTGGACATGGCAGACTCCATCTTGCTTTTAGCCTCACAGGTTGGCTGTCTTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 72 bp | TTCTCAAAGATAGTTTGGTGTGCAGGGGATAGGGTATaGGTGCTGCTGATTGGTTTGGGATGCAATCATAAG | + |
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Preference number: 6 (lower is better) Translates to: FSKIVWCAGDRV*VLLIGLGCNHK Trigger: CTTATGATTGCATCCCAAACCAATCAGCAGCACCCATACCCTATCCCCTGCACACCAAACTATCTTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 72 bp | AAAGAATCAGAGGTTAGGAGTTTCTCAAAGATAGTTTaGTGTGCAGGGGATAGGGTATGGGTGCTGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: KESEVRSFSKIV*CAGDRVWVLLI Trigger: AATCAGCAGCACCCATACCCTATCCCCTGCACACCAAACTATCTTTGAGAAACTCCTAACCTCTGATTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS GCA 72 bp | AGCAAGATGGAGTCTGCCATGTCCAATTTCTCTTATTaGCATAATTTTGCAAAGGTGGTTTCATCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: SKMESAMSNFSY*HNFAKVVSSPS Trigger: GGATGGAGATGAAACCACCTTTGCAAAATTATGGCAATAAGAGAAATTGGACATGGCAGACTCCATCTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CAA 90 bp | GCAAGATGGAGTCTGCCATGTCCAATTTCTCTTATTGCCATAATTTaGCAAAGGTGGTTTCATCTCCATCCATTGTCAACTTACAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ARWSLPCPISLIAII*QRWFHLHPLSTYKG Trigger: TCCCTTGTAAGTTGACAATGGATGGAGATGAAACCACCTTTGCAAAATTATGGCAATAAGAGAAATTGGACATGGCAGACTCCATCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CCA 72 bp | AGGTTCTACAATACTGAAGTTATTTACAGGAGTAACTaGGGAGGTTGCACATCTTGTGACTTCCAGAATAAT | + |
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Preference number: 6 (lower is better) Translates to: RFYNTEVIYRSN*GGCTSCDFQNN Trigger: ATTATTCTGGAAGTCACAAGATGTGCAACCTCCCCAGTTACTCCTGTAAATAACTTCAGTATTGTAGAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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| CDS CAA 72 bp | AGTCTGCCATGTCCAATTTCTCTTATTGCCATAATTTaGCAAAGGTGGTTTCATCTCCATCCATTGTCAACT | + |
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Preference number: 6 (lower is better) Translates to: SLPCPISLIAII*QRWFHLHPLST Trigger: AGTTGACAATGGATGGAGATGAAACCACCTTTGCAAAATTATGGCAATAAGAGAAATTGGACATGGCAGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550380.6 |
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