Pregenerated sensors for LNCOC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000253741Ensembl transcript IDs: ENST00000520572.2, ENST00000654797.1, ENST00000662059.1, ENST00000663158.1, ENST00000665898.1, ENST00000669349.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGTCCCATTTTCCACGAAAAGTCCCGCGGCTTCGGCCGCGGAGGTaGTGGAGCCTTTGCGCTCAGACGAAGGGCCGAACGGCCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GSHFPRKVPRLRPRR*WSLCAQTKGRTARA Trigger: GGCCCTGGCCGTTCGGCCCTTCGTCTGAGCGCAAAGGCTCCAGCACCTCCGCGGCCGAAGCCGCGGGACTTTTCGTGGAAAATGGGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS CCA 90 bp | TCCCATTTTCCACGAAAAGTCCCGCGGCTTCGGCCGCGGAGGTGCTaGAGCCTTTGCGCTCAGACGAAGGGCCGAACGGCCAGGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SHFPRKVPRLRPRRC*SLCAQTKGRTARAR Trigger: CCTGGCCCTGGCCGTTCGGCCCTTCGTCTGAGCGCAAAGGCTCCAGCACCTCCGCGGCCGAAGCCGCGGGACTTTTCGTGGAAAATGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS GCA 90 bp | GCCCTGGAGGTCCTGGAGCAGAAGCTAGGTTCCCGCAGAGTCCGCTaGAGCGCCGCTGGCGATCGGGCTGGGTCCCATTTTCCACGAAAA | + |
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Preference number: 5 (lower is better) Translates to: ALEVLEQKLGSRRVR*SAAGDRAGSHFPRK Trigger: TTTTCGTGGAAAATGGGACCCAGCCCGATCGCCAGCGGCGCTGCAGCGGACTCTGCGGGAACCTAGCTTCTGCTCCAGGACCTCCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS TCA 90 bp | TGCAGCCGGCCTCAGCCTGTCTTGAGCCACGGGACTGCCACAGACTaGGCCTTCCGGAGCATGGACTCGCTCCAGACCGTTGTCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: CSRPQPVLSHGTATD*AFRSMDSLQTVVTC Trigger: ACAGGTGACAACGGTCTGGAGCGAGTCCATGCTCCGGAAGGCTCAGTCTGTGGCAGTCCCGTGGCTCAAGACAGGCTGAGGCCGGCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | CCAGCACATTCTGCCCACAGGGAGATCTTCAGGGCTCGTGAATTCTaGTTCCGCCCAGCAGTCACTCTCCAGCCCTTCGGTATCCACGAA | + |
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Preference number: 5 (lower is better) Translates to: PAHSAHREIFRAREF*FRPAVTLQPFGIHE Trigger: TTCGTGGATACCGAAGGGCTGGAGAGTGACTGCTGGGCGGAATCAGAATTCACGAGCCCTGAAGATCTCCCTGTGGGCAGAATGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | TGGACACCCAGCACATTCTGCCCACAGGGAGATCTTCAGGGCTCGTaGATTCTGATTCCGCCCAGCAGTCACTCTCCAGCCCTTCGGTAT | + |
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Preference number: 5 (lower is better) Translates to: WTPSTFCPQGDLQGS*ILIPPSSHSPALRY Trigger: ATACCGAAGGGCTGGAGAGTGACTGCTGGGCGGAATCAGAATTCACGAGCCCTGAAGATCTCCCTGTGGGCAGAATGTGCTGGGTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 90 bp | AGGACCACCAGCACCTGTCAGGCTCTGCCTGTGTGTCCATCTTTTTaGCCGTCACAGGCTGGTGTTCACATCCTGCCATTCACACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RTTSTCQALPVCPSF*PSQAGVHILPFTPA Trigger: TGCTGGTGTGAATGGCAGGATGTGAACACCAGCCTGTGACGGGCAAAAAGATGGACACACAGGCAGAGCCTGACAGGTGCTGGTGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
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| CDS GCA 90 bp | CCAGCAACTCAGGACCAGATAGGACCACCAGCACCTGTCAGGCTCTaGCTGTGTGTCCATCTTTTTGCCCGTCACAGGCTGGTGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: PATQDQIGPPAPVRL*LCVHLFARHRLVFT Trigger: TGTGAACACCAGCCTGTGACGGGCAAAAAGATGGACACACAGGCAGAGCCTGACAGGTGCTGGTGGTCCTATCTGGTCCTGAGTTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
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| CDS GCA 90 bp | TCAGAGGCCAGAGAGAGGTGTAGGAACTGTGCTAGTGTAAGGCAGTaGCTGCTACAGTGGGTCCAGATGAAATACTGGGAGGTAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SEARERCRNCASVRQ*LLQWVQMKYWEVGR Trigger: TCTTCCTACCTCCCAGTATTTCATCTGGACCCACTGTAGCAGGCACTGCCTTACACTAGCACAGTTCCTACACCTCTCTCTGGCCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669349.1 |
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| CDS TCA 90 bp | CCAGAATGGCTGGGAGTCATGTGTCTGTCTGTGGTCACAAAGGCCTaGGCCAACCCTGTGTTTGAGAAGTTGAGACCTGTTTGTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: PEWLGVMCLSVVTKA*ANPVFEKLRPVCSQ Trigger: TTGGGAACAAACAGGTCTCAACTTCTCAAACACAGGGTTGGCTCAGGCCTTTGTGACCACAGACAGACACATGACTCCCAGCCATTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | AAAAGCTCAAGTATTGTTGACCAAAGGTTAAGAGTCAGTCTAGAGTaGGGGATTGGAGAAGCAGGAGATGGTGGCCCAGCTGGTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: KSSSIVDQRLRVSLE*GIGEAGDGGPAGQG Trigger: TCCCTGACCAGCTGGGCCACCATCTCCTGCTTCTCCAATCCCTCACTCTAGACTGACTCTTAACCTTTGGTCAACAATACTTGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS TCA 90 bp | TCGCTCCAGACCGTTGTCACCTGTTGCATTAAACTTGTTTTCTGTTaGTTACCTCTTGGTTTGACTTCCCAGGGTCTTGGGATGGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: SLQTVVTCCIKLVFC*LPLGLTSQGLGMGE Trigger: CTCTCCCATCCCAAGACCCTGGGAAGTCAAACCAAGAGGTAATCAACAGAAAACAAGTTTAATGCAACAGGTGACAACGGTCTGGAGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | GGTGGAGAAGTCAAAGATCAAGATGCCAACAGATTTGATGTCTGGTaGAGGCCTGTTCCTCATAGATGGCACCTTCTATGTGTCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GGEVKDQDANRFDVW*RPVPHRWHLLCVSG Trigger: TCCAGAGACACATAGAAGGTGCCATCTATGAGGAACAGGCCTTCACCAGACATCAAATCTGTTGGCATCTTGATCTTTGACTTCTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | GTTACTGTTCTTTGGCCCTCCAGAAAGTCAATAAGCAAGATGCCTTaGGCATTCACAAAACGGTTGCCACGACCTTTGCCCTTGACATGT | + |
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Preference number: 5 (lower is better) Translates to: VTVLWPSRKSISKMP*AFTKRLPRPLPLTC Trigger: ACATGTCAAGGGCAAAGGTCGTGGCAACCGTTTTGTGAATGCTCAAGGCATCTTGCTTATTGACTTTCTGGAGGGCCAAAGAACAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 90 bp | AACCAAGGTGTACAGCCTTCAAGTGTGTTCTCAAAGGAGGGTGCATaGCTTAAAAATTGTGGAGACCACTGCTCTGTCATCTGTGATTCC | + |
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Preference number: 5 (lower is better) Translates to: NQGVQPSSVFSKEGA*LKNCGDHCSVICDS Trigger: GGAATCACAGATGACAGAGCAGTGGTCTCCACAATTTTTAAGGCATGCACCCTCCTTTGAGAACACACTTGAAGGCTGTACACCTTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 90 bp | GTGTCTGCTCAGAGAATGAGGGTACAAATAAGGTTGGACTTTGAGTaGCATGATGGAAGCTTAGGACTATCCCCAAAGGTAAGAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VSAQRMRVQIRLDFE*HDGSLGLSPKVREK Trigger: CTTCTCTCTTACCTTTGGGGATAGTCCTAAGCTTCCATCATGGCACTCAAAGTCCAACCTTATTTGTACCCTCATTCTCTGAGCAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS TCA 90 bp | AATGACTTAAACAACACAAGAATGTGTATTTCTTGCTCTTGTAAATaGAGTGAGCAAGTAAGCAGCCCAGGGCTGTGGGCCACTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: NDLNNTRMCISCSCK*SEQVSSPGLWATAG Trigger: TCCAGCAGTGGCCCACAGCCCTGGGCTGCTTACTTGCTCACTTCATTTACAAGAGCAAGAAATACACATTCTTGTGTTGTTTAAGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS TCA 90 bp | CAGGTGCACAGATTCATAAATTCCCACACGTGTGTGTTCAACATCTaGAACTTAGGCCAAGTAGAGAGCATCAGGGTAAATGGCGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: QVHRFINSHTCVFNI*NLGQVESIRVNGVH Trigger: ATGAACGCCATTTACCCTGATGCTCTCTACTTGGCCTAAGTTTCAGATGTTGAACACACACGTGTGGGAATTTATGAATCTGTGCACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | TTTGACCCAGACAGAAGGGCCTCGGTGTCAGGCATTGGAATTGCGTaGTTGCCTTCTCTCGGTCTTTATTTCCTATTAGAAATATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: FDPDRRASVSGIGIA*LPSLGLYFLLEIFP Trigger: TGGAAATATTTCTAATAGGAAATAAAGACCGAGAGAAGGCAATCACGCAATTCCAATGCCTGACACCGAGGCCCTTCTGTCTGGGTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 90 bp | CATGAAGACACACTGGAAAGTATCTTGAACATGGGTTTCATGTCTTaGTCTAGTTCTGGCGGTGGAGAAGTCAAAGATCAAGATGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HEDTLESILNMGFMS*SSSGGGEVKDQDAN Trigger: GTTGGCATCTTGATCTTTGACTTCTCCACCGCCAGAACTAGATCAAGACATGAAACCCATGTTCAAGATACTTTCCAGTGTGTCTTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 90 bp | AGCAAGTCAAGAAATGTGAATACGGAAAAATTCGAAATTGGGAACTaGTGGGTCTCTGGTAACACTAGGAGCACTCCCAATTACTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SKSRNVNTEKFEIGN*WVSGNTRSTPNYLS Trigger: ACTCAAGTAATTGGGAGTGCTCCTAGTGTTACCAGAGACCCAGCAGTTCCCAATTTCGAATTTTTCCGTATTCACATTTCTTGACTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS TCA 90 bp | GCAAGAATACAGAGAAAGATCATGTATAGGAAGAGGCCAGGAAGTTaGAAGAATTATCCCCAGCAGTCACATTTTCTCTGTGAAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: ARIQRKIMYRKRPGS*KNYPQQSHFLCETE Trigger: TTCTGTTTCACAGAGAAAATGTGACTGCTGGGGATAATTCTTTCAACTTCCTGGCCTCTTCCTATACATGATCTTTCTCTGTATTCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS GCA 90 bp | TCATCAATGATTTCACCATGTTTCCAGCCAAGCTTCACCATCAATTaGATGTTTGTTCTGGTTTCAATTTTAGCAGAATTCATGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SSMISPCFQPSFTIN*MFVLVSILAEFMCL Trigger: CAGACACATGAATTCTGCTAAAATTGAAACCAGAACAAACATGCAATTGATGGTGAAGCTTGGCTGGAAACATGGTGAAATCATTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | CCACGAAAAGTCCCGCGGCTTCGGCCGCGGAGGTGCTaGAGCCTTTGCGCTCAGACGAAGGGCCGAACGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRKVPRLRPRRC*SLCAQTKGRTA Trigger: GGCCGTTCGGCCCTTCGTCTGAGCGCAAAGGCTCCAGCACCTCCGCGGCCGAAGCCGCGGGACTTTTCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS CCA 72 bp | CCGCAGAGTCCGCTGCAGCGCCGCTGGCGATCGGGCTaGGTCCCATTTTCCACGAAAAGTCCCGCGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: PQSPLQRRWRSG*VPFSTKSPAAS Trigger: CGAAGCCGCGGGACTTTTCGTGGAAAATGGGACCCAGCCCGATCGCCAGCGGCGCTGCAGCGGACTCTGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS TCA 72 bp | CTGCTGGCCTCCATTGCAGCCGGCCTCAGCCTGTCTTaGGCCACGGGACTGCCACAGACTGAGCCTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LLASIAAGLSLS*ATGLPQTEPSG Trigger: TCCGGAAGGCTCAGTCTGTGGCAGTCCCGTGGCTCAAGACAGGCTGAGGCCGGCTGCAATGGAGGCCAGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | TTTCCACGAAAAGTCCCGCGGCTTCGGCCGCGGAGGTaGTGGAGCCTTTGCGCTCAGACGAAGGGCCGAACG | + |
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Preference number: 6 (lower is better) Translates to: FPRKVPRLRPRR*WSLCAQTKGRT Trigger: CGTTCGGCCCTTCGTCTGAGCGCAAAGGCTCCAGCACCTCCGCGGCCGAAGCCGCGGGACTTTTCGTGGAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS GCA 72 bp | GTCCTGGAGCAGAAGCTAGGTTCCCGCAGAGTCCGCTaGAGCGCCGCTGGCGATCGGGCTGGGTCCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: VLEQKLGSRRVR*SAAGDRAGSHF Trigger: AAAATGGGACCCAGCCCGATCGCCAGCGGCGCTGCAGCGGACTCTGCGGGAACCTAGCTTCTGCTCCAGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | CAGCCCTTCCCTGAAGCAGCATTCAACACACAGGCCTaGCCCTCGTCCTCCCGACTCCCCCTTGGTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: QPFPEAAFNTQA*PSSSRLPLGAP Trigger: TGGGGCACCAAGGGGGAGTCGGGAGGACGAGGGCCAGGCCTGTGTGTTGAATGCTGCTTCAGGGAAGGGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | TTGCAGCCGGCCTCAGCCTGTCTTGAGCCACGGGACTaGCACAGACTGAGCCTTCCGGAGCATGGACTCGCT | + |
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Preference number: 6 (lower is better) Translates to: LQPASACLEPRD*HRLSLPEHGLA Trigger: AGCGAGTCCATGCTCCGGAAGGCTCAGTCTGTGGCAGTCCCGTGGCTCAAGACAGGCTGAGGCCGGCTGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | CCTCAGCCTGTCTTGAGCCACGGGACTGCCACAGACTaGGCCTTCCGGAGCATGGACTCGCTCCAGACCGTT | + |
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Preference number: 6 (lower is better) Translates to: PQPVLSHGTATD*AFRSMDSLQTV Trigger: AACGGTCTGGAGCGAGTCCATGCTCCGGAAGGCTCAGTCTGTGGCAGTCCCGTGGCTCAAGACAGGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | GAAGCTAGGTTCCCGCAGAGTCCGCTGCAGCGCCGCTaGCGATCGGGCTGGGTCCCATTTTCCACGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: EARFPQSPLQRR*RSGWVPFSTKS Trigger: ACTTTTCGTGGAAAATGGGACCCAGCCCGATCGCCAGCGGCGCTGCAGCGGACTCTGCGGGAACCTAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000669349.1 |
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| CDS CCA 72 bp | TCGAGCCAGGCCCACCAAGAGGCCAGCTCCACACCCTaGGTGATGGCCAGAATGGCTGGGAGTCATGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSQAHQEASSTP*VMARMAGSHVS Trigger: AGACACATGACTCCCAGCCATTCTGGCCATCACCCAGGGTGTGGAGCTGGCCTCTTGGTGGGCCTGGCTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 90 bp | CCAGTTGACTGTGCACCTTTGAGCAGGGCCGCCAGGGGTGAGGCTTaGACCCAGACAGAAGGGCCTCGGTGTCAGGCATTGGAATTGCGT | + |
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Preference number: 6 (lower is better) Translates to: PVDCAPLSRAARGEA*TQTEGPRCQALELR Trigger: ACGCAATTCCAATGCCTGACACCGAGGCCCTTCTGTCTGGGTCAAAGCCTCACCCCTGGCGGCCCTGCTCAAAGGTGCACAGTCAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | GCCACGGGACTGCCACAGACTGAGCCTTCCGGAGCATaGACTCGCTCCAGACCGTTGTCACCTGTTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: ATGLPQTEPSGA*TRSRPLSPVAL Trigger: TAATGCAACAGGTGACAACGGTCTGGAGCGAGTCCATGCTCCGGAAGGCTCAGTCTGTGGCAGTCCCGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | GGCCAGCTCCACACCCTGGGTGATGGCCAGAATGGCTaGGAGTCATGTGTCTGTCTGTGGTCACAAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GQLHTLGDGQNG*ESCVCLWSQRP Trigger: AGGCCTTTGTGACCACAGACAGACACATGACTCCCAGCCATTCTGGCCATCACCCAGGGTGTGGAGCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | TCCAGCCCTTCGGTATCCACGAAGTTGGTGGGGTGCTaGGGTGATGCTTCAGACTCAGTGTGGCCCACATCG | + |
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Preference number: 6 (lower is better) Translates to: SSPSVSTKLVGC*GDASDSVWPTS Trigger: CGATGTGGGCCACACTGAGTCTGAAGCATCACCTCAGCACCCCACCAACTTCGTGGATACCGAAGGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | TCTGCCCACAGGGAGATCTTCAGGGCTCGTGAATTCTaGTTCCGCCCAGCAGTCACTCTCCAGCCCTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: SAHREIFRAREF*FRPAVTLQPFG Trigger: ACCGAAGGGCTGGAGAGTGACTGCTGGGCGGAATCAGAATTCACGAGCCCTGAAGATCTCCCTGTGGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | CCATTCACACCAGCACCCAGAAACAGTAGCCCCAGCTaGTTCCAATTCGCAGCCCTGGGCTTGAGTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PFTPAPRNSSPS*FQFAALGLSLG Trigger: CCCCAAACTCAAGCCCAGGGCTGCGAATTGGAAGCAGCTGGGGCTACTGTTTCTGGGTGCTGGTGTGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
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| CDS GCA 72 bp | CAGGACCAGATAGGACCACCAGCACCTGTCAGGCTCTaGCTGTGTGTCCATCTTTTTGCCCGTCACAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QDQIGPPAPVRL*LCVHLFARHRL Trigger: CAGCCTGTGACGGGCAAAAAGATGGACACACAGGCAGAGCCTGACAGGTGCTGGTGGTCCTATCTGGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
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| CDS CCA 72 bp | GGGCTGCCCCCATTCCAGTGGTGGAGGCGCTGTGGATaGCTGCTTTTCCTCAACCTTTCCTACCAGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: GLPPFQWWRRCG*LLFLNLSYQIP Trigger: TGGAATCTGGTAGGAAAGGTTGAGGAAAAGCAGCCATCCACAGCGCCTCCACCACTGGAATGGGGGCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | AAACAGCAACCCCTAGACCCGCATTCCCAGTGCATATaGACAGGCCATACCACGCAGAAGCCAGCCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: KQQPLDPHSQCI*TGHTTQKPALP Trigger: GGGAAGGGCTGGCTTCTGCGTGGTATGGCCTGTCCATATGCACTGGGAATGCGGGTCTAGGGGTTGCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | AGCACATTCTGCCCACAGGGAGATCTTCAGGGCTCGTaGATTCTGATTCCGCCCAGCAGTCACTCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: STFCPQGDLQGS*ILIPPSSHSPA Trigger: GGCTGGAGAGTGACTGCTGGGCGGAATCAGAATTCACGAGCCCTGAAGATCTCCCTGTGGGCAGAATGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | AGTCACTCTCCAGCCCTTCGGTATCCACGAAGTTGGTaGGGTGCTGAGGTGATGCTTCAGACTCAGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHSPALRYPRSW*GAEVMLQTQCG Trigger: GCCACACTGAGTCTGAAGCATCACCTCAGCACCCCACCAACTTCGTGGATACCGAAGGGCTGGAGAGTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
||
| CDS CCA 72 bp | ACCTCTGGGTACATGAAGCCCTCCCCAAGGGGAATCTaGACACCCAGCACATTCTGCCCACAGGGAGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSGYMKPSPRGI*TPSTFCPQGDL Trigger: AAGATCTCCCTGTGGGCAGAATGTGCTGGGTGTCCAGATTCCCCTTGGGGAGGGCTTCATGTACCCAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
||
| CDS TCA 72 bp | CCCTTCGGTATCCACGAAGTTGGTGGGGTGCTGAGGTaGTGCTTCAGACTCAGTGTGGCCCACATCGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PFGIHEVGGVLR*CFRLSVAHIDF Trigger: AAAGTCGATGTGGGCCACACTGAGTCTGAAGCATCACCTCAGCACCCCACCAACTTCGTGGATACCGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
||
| CDS GCA 72 bp | ACTGCAACCTCGCCTTCCGGGTTCAAGCGATTCTCCTaGCTCAGCCTCCAGAGTAGCTGGTATTATGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: TATSPSGFKRFS*LSLQSSWYYGC Trigger: GCATCCATAATACCAGCTACTCTGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGAAGGCGAGGTTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669349.1 |
||
| CDS CCA 72 bp | AGTCAGTCTAGAGTGAGGGATTGGAGAAGCAGGAGATaGTGGCCCAGCTGGTCAGGGAAGGTCCTTACACAG | + |
|
Preference number: 6 (lower is better) Translates to: SQSRVRDWRSRR*WPSWSGKVLTQ Trigger: CTGTGTAAGGACCTTCCCTGACCAGCTGGGCCACCATCTCCTGCTTCTCCAATCCCTCACTCTAGACTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
||
| CDS CCA 72 bp | AGCAGTCACTCTCCAGCCCTTCGGTATCCACGAAGTTaGTGGGGTGCTGAGGTGATGCTTCAGACTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSHSPALRYPRS*WGAEVMLQTQC Trigger: ACACTGAGTCTGAAGCATCACCTCAGCACCCCACCAACTTCGTGGATACCGAAGGGCTGGAGAGTGACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | CAGCACCTGTCAGGCTCTGCCTGTGTGTCCATCTTTTaGCCCGTCACAGGCTGGTGTTCACATCCTGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: QHLSGSACVSIF*PVTGWCSHPAI Trigger: AATGGCAGGATGTGAACACCAGCCTGTGACGGGCAAAAAGATGGACACACAGGCAGAGCCTGACAGGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
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| CDS TCA 72 bp | GTAGCCCCAGCTGCTTCCAATTCGCAGCCCTGGGCTTaGGTTTGGGGAGCATTACTTTCATTAAGGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VAPAASNSQPWA*VWGALLSLRQA Trigger: TGCCTGCCTTAATGAAAGTAATGCTCCCCAAACTCAAGCCCAGGGCTGCGAATTGGAAGCAGCTGGGGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
||
| CDS GCA 72 bp | CATCTTTTTGCCCGTCACAGGCTGGTGTTCACATCCTaGCATTCACACCAGCACCCAGAAACAGTAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HLFARHRLVFTS*HSHQHPETVAP Trigger: TGGGGCTACTGTTTCTGGGTGCTGGTGTGAATGGCAGGATGTGAACACCAGCCTGTGACGGGCAAAAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
||
| CDS CCA 72 bp | GATGGCCAGAATGGCTGGGAGTCATGTGTCTGTCTGTaGTCACAAAGGCCTGAGCCAACCCTGTGTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DGQNGWESCVCL*SQRPEPTLCLR Trigger: TCTCAAACACAGGGTTGGCTCAGGCCTTTGTGACCACAGACAGACACATGACTCCCAGCCATTCTGGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | AGTAGCCCCAGCTGCTTCCAATTCGCAGCCCTGGGCTaGAGTTTGGGGAGCATTACTTTCATTAAGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSCFQFAALG*SLGSITFIKAG Trigger: GCCTGCCTTAATGAAAGTAATGCTCCCCAAACTCAAGCCCAGGGCTGCGAATTGGAAGCAGCTGGGGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 |
||
| CDS TCA 72 bp | GAGCATTCACAAAACGGTTGCCACGACCTTTGCCCTTaGCATGTCTGCTTTTACTCTGATGGGACCACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EHSQNGCHDLCP*HVCFYSDGTTP Trigger: GGGCGTGGTCCCATCAGAGTAAAAGCAGACATGTCAAGGGCAAAGGTCGTGGCAACCGTTTTGTGAATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | ACTCTGATGGGACCACGCCCACCTCTAGGTAGTCATTaGTTTGCTTGTGCTTTGCCTTCAGGAGTGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLMGPRPPLGSH*FACALPSGVYW Trigger: CCAGTACACTCCTGAAGGCAAAGCACAAGCAAAGCAATGACTACCTAGAGGTGGGCGTGGTCCCATCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
||
| CDS CCA 72 bp | TGTCTCTGGAAAGACCCCAAGACACCTCAGGTGACGTaGATAGCGGAGGCCTCCGAGAAGAGAATCCATTTA | + |
|
Preference number: 6 (lower is better) Translates to: CLWKDPKTPQVT*IAEASEKRIHL Trigger: TAAATGGATTCTCTTCTCGGAGGCCTCCGCTATCCACGTCACCTGAGGTGTCTTGGGGTCTTTCCAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662059.1 ENST00000663158.1 ENST00000665898.1 |
||
| CDS TCA 72 bp | CTGGGAGTCATGTGTCTGTCTGTGGTCACAAAGGCCTaGGCCAACCCTGTGTTTGAGAAGTTGAGACCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGVMCLSVVTKA*ANPVFEKLRPV Trigger: AACAGGTCTCAACTTCTCAAACACAGGGTTGGCTCAGGCCTTTGTGACCACAGACAGACACATGACTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | AGAGAGAGGTGTAGGAACTGTGCTAGTGTAAGGCAGTaGCTGCTACAGTGGGTCCAGATGAAATACTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RERCRNCASVRQ*LLQWVQMKYWE Trigger: CTCCCAGTATTTCATCTGGACCCACTGTAGCAGGCACTGCCTTACACTAGCACAGTTCCTACACCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669349.1 |
||
| CDS CCA 72 bp | GGCCATAGAACGCTTTTCTCTTATCTGCAGCTGAGCTaGGAGAAAGTTTTGGCACCCACCGAGTGGACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GHRTLFSYLQLS*EKVLAPTEWTV Trigger: AACTGTCCACTCGGTGGGTGCCAAAACTTTCTCCCAGCTCAGCTGCAGATAAGAGAAAAGCGTTCTATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | GCTTTGACCCAGACAGAAGGGCCTCGGTGTCAGGCATaGGAATTGCGTGATTGCCTTCTCTCGGTCTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: ALTQTEGPRCQA*ELRDCLLSVFI Trigger: AATAAAGACCGAGAGAAGGCAATCACGCAATTCCAATGCCTGACACCGAGGCCCTTCTGTCTGGGTCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
||
| CDS CAA 90 bp | CTGCCACAGACTGAGCCTTCCGGAGCATGGACTCGCTCCAGACCGTaGTCACCTGTTGCATTAAACTTGTTTTCTGTTGATTACCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPQTEPSGAWTRSRP*SPVALNLFSVDYLL Trigger: CAAGAGGTAATCAACAGAAAACAAGTTTAATGCAACAGGTGACAACGGTCTGGAGCGAGTCCATGCTCCGGAAGGCTCAGTCTGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
||
| CDS TCA 72 bp | CTTTGGCCCTCCAGAAAGTCAATAAGCAAGATGCCTTaGGCATTCACAAAACGGTTGCCACGACCTTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LWPSRKSISKMP*AFTKRLPRPLP Trigger: GGGCAAAGGTCGTGGCAACCGTTTTGTGAATGCTCAAGGCATCTTGCTTATTGACTTTCTGGAGGGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
||
| CDS TCA 72 bp | GTCTGTGGTCACAAAGGCCTGAGCCAACCCTGTGTTTaGGAAGTTGAGACCTGTTTGTTCCCAAACAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VCGHKGLSQPCV*EVETCLFPNSN Trigger: GTTGCTGTTTGGGAACAAACAGGTCTCAACTTCTCAAACACAGGGTTGGCTCAGGCCTTTGTGACCACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | GAATTGTTTCCTCACAGACTGATGTGGCTGGCCTGCTaGTGTGGACTTCCTCTCCAACATCATCTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELFPHRLMWLAC*CGLPLQHHLFS Trigger: AGAGAAGAGATGATGTTGGAGAGGAAGTCCACAGCAGCAGGCCAGCCACATCAGTCTGTGAGGAAACAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
||
| CDS GCA 72 bp | GATGAATTGTTTCCTCACAGACTGATGTGGCTGGCCTaGTGCTGTGGACTTCCTCTCCAACATCATCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DELFPHRLMWLA*CCGLPLQHHLF Trigger: GAAGAGATGATGTTGGAGAGGAAGTCCACAGCAGCAGGCCAGCCACATCAGTCTGTGAGGAAACAATTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | ACCCAGACAGAAGGGCCTCGGTGTCAGGCATTGGAATaGCGTGATTGCCTTCTCTCGGTCTTTATTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TQTEGPRCQALE*RDCLLSVFISY Trigger: ATAGGAAATAAAGACCGAGAGAAGGCAATCACGCAATTCCAATGCCTGACACCGAGGCCCTTCTGTCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | AGGAACTGTGCTAGTGTAAGGCAGTGCCTGCTACAGTaGGTCCAGATGAAATACTGGGAGGTAGGAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RNCASVRQCLLQ*VQMKYWEVGRK Trigger: TTTTCTTCCTACCTCCCAGTATTTCATCTGGACCCACTGTAGCAGGCACTGCCTTACACTAGCACAGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669349.1 |
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| CDS CAA 72 bp | CGCCCACCTCTAGGTAGTCATTGCTTTGCTTGTGCTTaGCCTTCAGGAGTGTACTGGTTAAGCCACATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPPLGSHCFACA*PSGVYWLSHIS Trigger: TGAAATGTGGCTTAACCAGTACACTCCTGAAGGCAAAGCACAAGCAAAGCAATGACTACCTAGAGGTGGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | ACTGAGCCTTCCGGAGCATGGACTCGCTCCAGACCGTaGTCACCTGTTGCATTAAACTTGTTTTCTGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TEPSGAWTRSRP*SPVALNLFSVD Trigger: ATCAACAGAAAACAAGTTTAATGCAACAGGTGACAACGGTCTGGAGCGAGTCCATGCTCCGGAAGGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 90 bp | CAGAATACGGTGGTGTCTGCTCAGAGAATGAGGGTACAAATAAGGTaGGACTTTGAGTGCCATGATGGAAGCTTAGGACTATCCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QNTVVSAQRMRVQIR*DFECHDGSLGLSPK Trigger: CTTTGGGGATAGTCCTAAGCTTCCATCATGGCACTCAAAGTCCAACCTTATTTGTACCCTCATTCTCTGAGCAGACACCACCGTATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS CAA 90 bp | ATGCCTAGTGATTTCCCATTGAAACTCTCACAAAACTGGCCTTGTTaGATGAGAGGAATGAGCAGGAGCATTGTCATGGTGGAGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MPSDFPLKLSQNWPC*MRGMSRSIVMVEKG Trigger: GCCCTTCTCCACCATGACAATGCTCCTGCTCATTCCTCTCATCAAACAAGGCCAGTTTTGTGAGAGTTTCAATGGGAAATCACTAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | GACAGAAGGGCCTCGGTGTCAGGCATTGGAATTGCGTaGTTGCCTTCTCTCGGTCTTTATTTCCTATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DRRASVSGIGIA*LPSLGLYFLLE Trigger: TTCTAATAGGAAATAAAGACCGAGAGAAGGCAATCACGCAATTCCAATGCCTGACACCGAGGCCCTTCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS GCA 72 bp | GTACAGCCTTCAAGTGTGTTCTCAAAGGAGGGTGCATaGCTTAAAAATTGTGGAGACCACTGCTCTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VQPSSVFSKEGA*LKNCGDHCSVI Trigger: GATGACAGAGCAGTGGTCTCCACAATTTTTAAGGCATGCACCCTCCTTTGAGAACACACTTGAAGGCTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | AACAACACAAGAATGTGTATTTCTTGCTCTTGTAAATaGAGTGAGCAAGTAAGCAGCCCAGGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NNTRMCISCSCK*SEQVSSPGLWA Trigger: GGCCCACAGCCCTGGGCTGCTTACTTGCTCACTTCATTTACAAGAGCAAGAAATACACATTCTTGTGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS TCA 72 bp | TGTAACTCATTTATTGCTGATGGCCACTCTTTTCCTTaGCTCCCCTCTGCCTCTGAGGGCTTCAGTATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CNSFIADGHSFP*LPSASEGFSID Trigger: ATCAATACTGAAGCCCTCAGAGGCAGAGGGGAGTCAAGGAAAAGAGTGGCCATCAGCAATAAATGAGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | GTGGTGTCTGCTCAGAGAATGAGGGTACAAATAAGGTaGGACTTTGAGTGCCATGATGGAAGCTTAGGACTA | + |
|
Preference number: 6 (lower is better) Translates to: VVSAQRMRVQIR*DFECHDGSLGL Trigger: TAGTCCTAAGCTTCCATCATGGCACTCAAAGTCCAACCTTATTTGTACCCTCATTCTCTGAGCAGACACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS CAA 72 bp | ATCAGTCCTCTTAAATTAGGGCACAAACAAGATGAATaGTTTCCTCACAGACTGATGTGGCTGGCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISPLKLGHKQDE*FPHRLMWLACC Trigger: GCAGCAGGCCAGCCACATCAGTCTGTGAGGAAACAATTCATCTTGTTTGTGCCCTAATTTAAGAGGACTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | CTTTTCTCTTATCTGCAGCTGAGCTGGGAGAAAGTTTaGGCACCCACCGAGTGGACAGTTTACTCAACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LFSYLQLSWEKV*APTEWTVYSTL Trigger: TAAAGTTGAGTAAACTGTCCACTCGGTGGGTGCCAAAACTTTCTCCCAGCTCAGCTGCAGATAAGAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 90 bp | CTGCTATTAATCAGTCCTCTTAAATTAGGGCACAAACAAGATGAATaGTTTCCTCACAGACTGATGTGGCTGGCCTGCTGCTGTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLISPLKLGHKQDE*FPHRLMWLACCCGL Trigger: AAGTCCACAGCAGCAGGCCAGCCACATCAGTCTGTGAGGAAACAATTCATCTTGTTTGTGCCCTAATTTAAGAGGACTGATTAATAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 90 bp | AGTAACCAAATCAGGCCTGGAAGGTGTATGCCTAGTGATTTCCCATaGAAACTCTCACAAAACTGGCCTTGTTTGATGAGAGGAATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SNQIRPGRCMPSDFP*KLSQNWPCLMRGMS Trigger: GCTCATTCCTCTCATCAAACAAGGCCAGTTTTGTGAGAGTTTCAATGGGAAATCACTAGGCATACACCTTCCAGGCCTGATTTGGTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | GTCAAAGATCAAGATGCCAACAGATTTGATGTCTGGTaGAGGCCTGTTCCTCATAGATGGCACCTTCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: VKDQDANRFDVW*RPVPHRWHLLC Trigger: ACATAGAAGGTGCCATCTATGAGGAACAGGCCTTCACCAGACATCAAATCTGTTGGCATCTTGATCTTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | GGGTCTCTGGTAACACTAGGAGCACTCCCAATTACTTaGGTAAGGGAGATAGAAAATTATTGCAGGGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLVTLGALPIT*VREIENYCRVR Trigger: CCTAACCCTGCAATAATTTTCTATCTCCCTTACTCAAGTAATTGGGAGTGCTCCTAGTGTTACCAGAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS GCA 72 bp | CAGAGAATGAGGGTACAAATAAGGTTGGACTTTGAGTaGCATGATGGAAGCTTAGGACTATCCCCAAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QRMRVQIRLDFE*HDGSLGLSPKV Trigger: TACCTTTGGGGATAGTCCTAAGCTTCCATCATGGCACTCAAAGTCCAACCTTATTTGTACCCTCATTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS CAA 72 bp | GATTTCCCATTGAAACTCTCACAAAACTGGCCTTGTTaGATGAGAGGAATGAGCAGGAGCATTGTCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DFPLKLSQNWPC*MRGMSRSIVMV Trigger: CACCATGACAATGCTCCTGCTCATTCCTCTCATCAAACAAGGCCAGTTTTGTGAGAGTTTCAATGGGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | ATCAGGCCTGGAAGGTGTATGCCTAGTGATTTCCCATaGAAACTCTCACAAAACTGGCCTTGTTTGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IRPGRCMPSDFP*KLSQNWPCLMR Trigger: TCTCATCAAACAAGGCCAGTTTTGTGAGAGTTTCAATGGGAAATCACTAGGCATACACCTTCCAGGCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | AATGTGAATACGGAAAAATTCGAAATTGGGAACTGCTaGGTCTCTGGTAACACTAGGAGCACTCCCAATTAC | + |
|
Preference number: 6 (lower is better) Translates to: NVNTEKFEIGNC*VSGNTRSTPNY Trigger: GTAATTGGGAGTGCTCCTAGTGTTACCAGAGACCCAGCAGTTCCCAATTTCGAATTTTTCCGTATTCACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS TCA 72 bp | ACACTGGAAAGTATCTTGAACATGGGTTTCATGTCTTaGTCTAGTTCTGGCGGTGGAGAAGTCAAAGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: TLESILNMGFMS*SSSGGGEVKDQ Trigger: TTGATCTTTGACTTCTCCACCGCCAGAACTAGATCAAGACATGAAACCCATGTTCAAGATACTTTCCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | CAGAGAAAGATCATGTATAGGAAGAGGCCAGGAAGTTaGAAGAATTATCCCCAGCAGTCACATTTTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QRKIMYRKRPGS*KNYPQQSHFLC Trigger: ACAGAGAAAATGTGACTGCTGGGGATAATTCTTTCAACTTCCTGGCCTCTTCCTATACATGATCTTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
||
| CDS GCA 72 bp | TCACATTTTCTCTGTGAAACAGAATACGGTGGTGTCTaGTCAGAGAATGAGGGTACAAATAAGGTTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: SHFLCETEYGGV*SENEGTNKVGL Trigger: AAGTCCAACCTTATTTGTACCCTCATTCTCTGAGCAGACACCACCGTATTCTGTTTCACAGAGAAAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520572.2 ENST00000654797.1 ENST00000662059.1 |
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| CDS CCA 72 bp | CATTGCTTTGCTTGTGCTTTGCCTTCAGGAGTGTACTaGTTAAGCCACATTTCATCTCCGGCTATAATTATA | + |
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Preference number: 6 (lower is better) Translates to: HCFACALPSGVY*LSHISSPAIII Trigger: TATAATTATAGCCGGAGATGAAATGTGGCTTAACCAGTACACTCCTGAAGGCAAAGCACAAGCAAAGCAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CCA 72 bp | GGTGACGATTTCCTGGGTGTTTTCCTGCTAAATCGTTaGCTGACTTTCTCTATACACTCTCATAATAAGATG | + |
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Preference number: 6 (lower is better) Translates to: GDDFLGVFLLNR*LTFSIHSHNKM Trigger: CATCTTATTATGAGAGTGTATAGAGAAAGTCAGCCAACGATTTAGCAGGAAAACACCCAGGAAATCGTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | AGATTCATAAATTCCCACACGTGTGTGTTCAACATCTaGAACTTAGGCCAAGTAGAGAGCATCAGGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: RFINSHTCVFNI*NLGQVESIRVN Trigger: ATTTACCCTGATGCTCTCTACTTGGCCTAAGTTTCAGATGTTGAACACACACGTGTGGGAATTTATGAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | AAGCTGAACACCTTGGGATACCTACAGCGTTGGCTATaGTTTCTGCTGCTATTAATCAGTCCTCTTAAATTA | + |
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Preference number: 6 (lower is better) Translates to: KLNTLGYLQRWL*FLLLLISPLKL Trigger: TAATTTAAGAGGACTGATTAATAGCAGCAGAAACAATAGCCAACGCTGTAGGTATCCCAAGGTGTTCAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | TTACTCAACTTTAATTTCAGTCAGAATTGTGTAAGCTaGACACCTTGGGATACCTACAGCGTTGGCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: LLNFNFSQNCVS*TPWDTYSVGYC Trigger: ACAATAGCCAACGCTGTAGGTATCCCAAGGTGTTCAGCTTACACAATTCTGACTGAAATTAAAGTTGAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS CAA 72 bp | TCTCTATACACTCTCATAATAAGATGTTACTGTTCTTaGGCCCTCCAGAAAGTCAATAAGCAAGATGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLYTLIIRCYCS*ALQKVNKQDAL Trigger: CAAGGCATCTTGCTTATTGACTTTCTGGAGGGCCAAAGAACAGTAACATCTTATTATGAGAGTGTATAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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| CDS TCA 72 bp | AGGCATTGTCCCTATAAACTTTCAATAAATCATCAATaGTTTCACCATGTTTCCAGCCAAGCTTCACCATCA | + |
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Preference number: 6 (lower is better) Translates to: RHCPYKLSINHQ*FHHVSSQASPS Trigger: TGATGGTGAAGCTTGGCTGGAAACATGGTGAAATCATTGATGATTTATTGAAAGTTTATAGGGACAATGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520572.2 ENST00000663158.1 ENST00000665898.1 ENST00000669349.1 |
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