Pregenerated sensors for LNCARSR (Homo sapiens)
Ensembl gene IDs: ENSG00000233086Ensembl transcript IDs: ENST00000413352.3, ENST00000424980.5, ENST00000608561.1, ENST00000628133.1, ENST00000656806.1, ENST00000663687.1, ENST00000665514.1, ENST00000666862.1, ENST00000670754.1, ENST00000671232.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACTAACCCTAGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SWARKQAALRTSQLS*GIDCLWACTNPRAE Trigger: CTCAGCCCTAGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CCA 90 bp | AGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACCTCAGTGCTAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SWARKQAALRTSQLS*GIDCLWACTSVLAP Trigger: TGGAGCTAGCACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CCA 90 bp | AGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACCCTAGGGCTGAGATAC | + |
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Preference number: 5 (lower is better) Translates to: SWARKQAALRTSQLS*GIDCLWACTLGLRY Trigger: GTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CCA 90 bp | TGGTTGGAGCTGAGCAATCCGTTGGCACATTCAGTGAGGCAGGAGTaGTTGGCAGGGTTAGGGCTGATGAAGAAGCCTGCAGTCCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: WLELSNPLAHSVRQE*LAGLGLMKKPAVPA Trigger: TGCTGGGACTGCAGGCTTCTTCATCAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608561.1 |
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| CDS CCA 90 bp | TGGTTGGAGCTGAGCAATCCGTTGGCACATTCAGTGAGGCAGGAGTaGTTGGCAGGGTTAGGGCTGATGAAGAAGCCCCCAGCACTTCCA | + |
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Preference number: 5 (lower is better) Translates to: WLELSNPLAHSVRQE*LAGLGLMKKPPALP Trigger: TGGAAGTGCTGGGGGCTTCTTCATCAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000663687.1 ENST00000665514.1 ENST00000671232.1 |
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| CDS GCA 90 bp | AAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTaGCTCTGGGCTTGCACTAACCCTAGGGCTGAGATACAGCATCTC | + |
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Preference number: 5 (lower is better) Translates to: KQAALRTSQLSWGID*LWACTNPRAEIQHL Trigger: GAGATGCTGTATCTCAGCCCTAGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS GCA 90 bp | GGCTTGCACCTCAGTGCTAGCTCCATAAGAACAGGGACCTTGCCTTaGCCATCCACAGCTGTATTCCCAGCAACTAGAATAGTGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GLHLSASSIRTGTLP*PSTAVFPATRIVSA Trigger: GGCAGACACTATTCTAGTTGCTGGGAATACAGCTGTGGATGGGCAAGGCAAGGTCCCTGTTCTTATGGAGCTAGCACTGAGGTGCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS GCA 90 bp | TTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCTTaGACCCTAGGGCTGAGATACAGCATCTCAAAAAGAGCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRTSQLSWGIDCLWA*TLGLRYSISKRAPP Trigger: TGGAGGAGCTCTTTTTGAGATGCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 90 bp | AAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTaGCTCTGGGCTTGCACCCTAGGGCTGAGATACAGCATCTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: KQAALRTSQLSWGID*LWACTLGLRYSISK Trigger: TTTTGAGATGCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CCA 90 bp | GCAGCATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTaGGCTTGCACCCTAGGGCTGAGATACAGCATCTCAAAAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: AALRTSQLSWGIDCL*ACTLGLRYSISKRA Trigger: AGCTCTTTTTGAGATGCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CCA 90 bp | GCAGCATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTaGGCTTGCACTAACCCTAGGGCTGAGATACAGCATCTCAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: AALRTSQLSWGIDCL*ACTNPRAEIQHLKK Trigger: CTTTTTGAGATGCTGTATCTCAGCCCTAGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CCA 90 bp | TGGTTGGAGCTGAGCAATCCGTTGGCACATTCAGTGAGGCAGGAGTaGTTGGCAGGGTTAGGGCTGATGAAGAAGCCTTATAATGACATG | + |
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Preference number: 5 (lower is better) Translates to: WLELSNPLAHSVRQE*LAGLGLMKKPYNDM Trigger: CATGTCATTATAAGGCTTCTTCATCAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000413352.3 ENST00000656806.1 ENST00000666862.1 ENST00000670754.1 |
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| CDS CCA 90 bp | TATAATGACATGTTACCAAGAGGCAGCAGATGTGTAGTTCTAAGTTaGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: YNDMLPRGSRCVVLS*ARKQAALRTSQLSW Trigger: CCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTTAGAACTACACATCTGCTGCCTCTTGGTAACATGTCATTATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000413352.3 ENST00000424980.5 ENST00000608561.1 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 90 bp | GGCACCTTCAACAGCCCTTACACATTTCTGGGAGGTGGTAGCAAGTaGCATGCCCTACACTGCCCAGCATTCATAATAACTTACAACAAT | + |
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Preference number: 5 (lower is better) Translates to: GTFNSPYTFLGGGSK*HALHCPAFIITYNN Trigger: ATTGTTGTAAGTTATTATGAATGCTGGGCAGTGTAGGGCATGGCACTTGCTACCACCTCCCAGAAATGTGTAAGGGCTGTTGAAGGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413352.3 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 90 bp | CCTTACACATTTCTGGGAGGTGGTAGCAAGTGCCATGCCCTACACTaGCCAGCATTCATAATAACTTACAACAATACAATCATAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: PYTFLGGGSKCHALH*PAFIITYNNTIIAF Trigger: AAAAGCTATGATTGTATTGTTGTAAGTTATTATGAATGCTGGGCAGTGTAGGGCATGGCACTTGCTACCACCTCCCAGAAATGTGTAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413352.3 ENST00000608561.1 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS TCA 90 bp | AAATTCATTTTACTTCTTTGTGTCTCCGCTTGCTTTCTCCAGTTGTaGCTTCTCTTCACTCTTAGTAGGAGACAGAATTCTACTCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: KFILLLCVSACFLQL*LLFTLSRRQNSTPP Trigger: AGGGGGAGTAGAATTCTGTCTCCTACTAAGAGTGAAGAGAAGTCACAACTGGAGAAAGCAAGCGGAGACACAAAGAAGTAAAATGAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628133.1 |
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| CDS TCA 90 bp | ATTTCTACATGCTATAGATGTCCCATCAAACCCTGTTTCCAACTTTaGATGATTTGTTTGAATGCCTTCACTTGCTTTTGTCCACTTCGG | + |
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Preference number: 5 (lower is better) Translates to: ISTCYRCPIKPCFQL*MICLNAFTCFCPLR Trigger: CCGAAGTGGACAAAAGCAAGTGAAGGCATTCAAACAAATCATTCAAAGTTGGAAACAGGGTTTGATGGGACATCTATAGCATGTAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663687.1 ENST00000665514.1 ENST00000671232.1 |
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| CDS CCA 72 bp | CGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RKQAALRTSQLS*GIDCLWACTWV Trigger: CACCCAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413352.3 ENST00000424980.5 |
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| CDS CCA 72 bp | CGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACCCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: RKQAALRTSQLS*GIDCLWACTLG Trigger: CCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 72 bp | TGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTaGAGTTGGGGTATAGACTGCCTCTGGGCTTGCACC | + |
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Preference number: 6 (lower is better) Translates to: WARKQAALRTSQ*SWGIDCLWACT Trigger: GGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413352.3 ENST00000424980.5 ENST00000663687.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 90 bp | AAGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTaGGGGTATAGACTGCCTCTGGGCTTGCACCTCAGTGCTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLGTEAGSIEDQPVE*GYRLPLGLHLSASS Trigger: GGAGCTAGCACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CAA 90 bp | GTTCTAAGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTaGAGTTGGGGTATAGACTGCCTCTGGGCTTGCACCCTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VLSWARKQAALRTSQ*SWGIDCLWACTLGL Trigger: CAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CCA 72 bp | CGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RKQAALRTSQLS*GIDCLWACTSV Trigger: CACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CAA 72 bp | ACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTaGGGGTATAGACTGCCTCTGGGCTTGCACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TEAGSIEDQPVE*GYRLPLGLHLG Trigger: ACCCAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413352.3 ENST00000424980.5 |
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| CDS CAA 72 bp | TGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTaGAGTTGGGGTATAGACTGCCTCTGGGCTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: WARKQAALRTSQ*SWGIDCLWACT Trigger: AGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CAA 72 bp | ACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTaGGGGTATAGACTGCCTCTGGGCTTGCACCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TEAGSIEDQPVE*GYRLPLGLHPR Trigger: CCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 90 bp | AAGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTaGGGGTATAGACTGCCTCTGGGCTTGCACCCTAGGGCTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: KLGTEAGSIEDQPVE*GYRLPLGLHPRAEI Trigger: TATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 72 bp | GCATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTaGCTCTGGGCTTGCACCCTAGGGCTGAGATACAGC | + |
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Preference number: 6 (lower is better) Translates to: ALRTSQLSWGID*LWACTLGLRYS Trigger: GCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CCA 72 bp | CGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTTaGGGTATAGACTGCCTCTGGGCTTGCACTAACCCT | + |
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Preference number: 6 (lower is better) Translates to: RKQAALRTSQLS*GIDCLWACTNP Trigger: AGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CAA 72 bp | ACGGAAGCAGGCAGCATTGAGGACCAGCCAGTTGAGTaGGGGTATAGACTGCCTCTGGGCTTGCACCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: TEAGSIEDQPVE*GYRLPLGLHLS Trigger: ACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CAA 90 bp | GGCAGCAGATGTGTAGTTCTAAGTTGGGCACGGAAGCAGGCAGCATaGAGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GSRCVVLSWARKQAA*RTSQLSWGIDCLWA Trigger: AGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTTAGAACTACACATCTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000413352.3 ENST00000424980.5 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 90 bp | TTGGAGCTGAGCAATCCGTTGGCACATTCAGTGAGGCAGGAGTGGTaGGCAGGGTTAGGGCTGATGAAGAAGCCTGCAGTCCCAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: LELSNPLAHSVRQEW*AGLGLMKKPAVPAL Trigger: AAGTGCTGGGACTGCAGGCTTCTTCATCAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608561.1 |
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| CDS CAA 90 bp | GTTCTAAGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTaGAGTTGGGGTATAGACTGCCTCTGGGCTTGCACTAACCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: VLSWARKQAALRTSQ*SWGIDCLWACTNPR Trigger: CCTAGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CAA 90 bp | TTGGAGCTGAGCAATCCGTTGGCACATTCAGTGAGGCAGGAGTGGTaGGCAGGGTTAGGGCTGATGAAGAAGCCCCCAGCACTTCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: LELSNPLAHSVRQEW*AGLGLMKKPPALPS Trigger: ACTTGGAAGTGCTGGGGGCTTCTTCATCAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000663687.1 ENST00000665514.1 ENST00000671232.1 |
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| CDS CAA 90 bp | GTTCTAAGTTGGGCACGGAAGCAGGCAGCATTGAGGACCAGCCAGTaGAGTTGGGGTATAGACTGCCTCTGGGCTTGCACCTCAGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: VLSWARKQAALRTSQ*SWGIDCLWACTSVL Trigger: TAGCACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGCTGCCTGCTTCCGTGCCCAACTTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CAA 72 bp | CAGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCTaGCACCTCAGTGCTAGCTCCATAAGAACAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QPVELGYRLPLG*HLSASSIRTGT Trigger: GGTCCCTGTTCTTATGGAGCTAGCACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CAA 90 bp | ATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCTaGCACCTCAGTGCTAGCTCCATAAGAACAGGGACCTTGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: IEDQPVELGYRLPLG*HLSASSIRTGTLPC Trigger: GCAAGGCAAGGTCCCTGTTCTTATGGAGCTAGCACTGAGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS TCA 72 bp | GCTCCTCCAAGACACAGACACACTCTTAGGGCTGGCTaGGATCCAGACTTTGCTGGAGAGGGCACAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: APPRHRHTLRAG*DPDFAGEGTVV Trigger: TACAACTGTGCCCTCTCCAGCAAAGTCTGGATCTCAGCCAGCCCTAAGAGTGTGTCTGTGTCTTGGAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656806.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 72 bp | GCATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTaGCTCTGGGCTTGCACTAACCCTAGGGCTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: ALRTSQLSWGID*LWACTNPRAEI Trigger: TATCTCAGCCCTAGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CCA 72 bp | AGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTaGGCTTGCACTAACCCTAGGGCTGAGATACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RTSQLSWGIDCL*ACTNPRAEIQH Trigger: ATGCTGTATCTCAGCCCTAGGGTTAGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656806.1 ENST00000665514.1 |
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| CDS CAA 72 bp | CCTTCTTCTTTTCCTTGGTTGGAGCTGAGCAATCCGTaGGCACATTCAGTGAGGCAGGAGTGGTTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSSFPWLELSNP*AHSVRQEWLAG Trigger: CCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAACCAAGGAAAAGAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000413352.3 ENST00000608561.1 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 90 bp | ATTGAGGACCAGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCTaGCACCCTAGGGCTGAGATACAGCATCTCAAAAAGAGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: IEDQPVELGYRLPLG*HPRAEIQHLKKSSS Trigger: GGAGGAGCTCTTTTTGAGATGCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTGGTCCTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CCA 72 bp | AAGAACAAGGCACCTTCAACAGCCCTTACACATTTCTaGGAGGTGGTAGCAAGTGCCATGCCCTACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: KNKAPSTALTHF*EVVASAMPYTA Trigger: GGCAGTGTAGGGCATGGCACTTGCTACCACCTCCCAGAAATGTGTAAGGGCTGTTGAAGGTGCCTTGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413352.3 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 72 bp | CAGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCTaGCACCCTAGGGCTGAGATACAGCATCTCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: QPVELGYRLPLG*HPRAEIQHLKK Trigger: CTTTTTGAGATGCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS CAA 90 bp | ATCCAACTTCCTTCTTCTTTTCCTTGGTTGGAGCTGAGCAATCCGTaGGCACATTCAGTGAGGCAGGAGTGGTTGGCAGGGTTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IQLPSSFPWLELSNP*AHSVRQEWLAGLGL Trigger: CAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAACCAAGGAAAAGAAGAAGGAAGTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000413352.3 ENST00000608561.1 ENST00000656806.1 ENST00000663687.1 ENST00000665514.1 ENST00000666862.1 ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 72 bp | AGCCAGTTGAGTTGGGGTATAGACTGCCTCTGGGCTTaGACCCTAGGGCTGAGATACAGCATCTCAAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SQLSWGIDCLWA*TLGLRYSISKR Trigger: TCTTTTTGAGATGCTGTATCTCAGCCCTAGGGTGCAAGCCCAGAGGCAGTCTATACCCCAACTCAACTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670754.1 ENST00000671232.1 |
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| CDS GCA 72 bp | CTCAGTGCTAGCTCCATAAGAACAGGGACCTTGCCTTaGCCATCCACAGCTGTATTCCCAGCAACTAGAATA | + |
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Preference number: 6 (lower is better) Translates to: LSASSIRTGTLP*PSTAVFPATRI Trigger: TATTCTAGTTGCTGGGAATACAGCTGTGGATGGGCAAGGCAAGGTCCCTGTTCTTATGGAGCTAGCACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666862.1 |
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| CDS CAA 90 bp | TTGGAGCTGAGCAATCCGTTGGCACATTCAGTGAGGCAGGAGTGGTaGGCAGGGTTAGGGCTGATGAAGAAGCCTTATAATGACATGTTA | + |
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Preference number: 6 (lower is better) Translates to: LELSNPLAHSVRQEW*AGLGLMKKPYNDML Trigger: TAACATGTCATTATAAGGCTTCTTCATCAGCCCTAACCCTGCCAACCACTCCTGCCTCACTGAATGTGCCAACGGATTGCTCAGCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000413352.3 ENST00000656806.1 ENST00000666862.1 ENST00000670754.1 |
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| CDS CAA 72 bp | AATTCCAGCATTTTCCTGACAAACATCAAAGCTACTTaGGATCCAGGGTTGACTTCGCATCCCTCAAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: NSSIFLTNIKAT*DPGLTSHPSKS Trigger: GCTCTTTGAGGGATGCGAAGTCAACCCTGGATCCAAAGTAGCTTTGATGTTTGTCAGGAAAATGCTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424980.5 ENST00000628133.1 |
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| CDS TCA 72 bp | TGCTATAGATGTCCCATCAAACCCTGTTTCCAACTTTaGATGATTTGTTTGAATGCCTTCACTTGCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CYRCPIKPCFQL*MICLNAFTCFC Trigger: ACAAAAGCAAGTGAAGGCATTCAAACAAATCATTCAAAGTTGGAAACAGGGTTTGATGGGACATCTATAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663687.1 ENST00000665514.1 ENST00000671232.1 |
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| CDS GCA 72 bp | ATAATCTGGAGCCATTTTTGTTTAAAGCTGTCCAAGTaGTTCTTGGATACTTATCAATCTATTCCAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: IIWSHFCLKLSK*FLDTYQSIPER Trigger: TCTTTCTGGAATAGATTGATAAGTATCCAAGAAGCACTTGGACAGCTTTAAACAAAAATGGCTCCAGATTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413352.3 |
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