RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMX1B (Homo sapiens)

Ensembl gene IDs: ENSG00000136944

Ensembl transcript IDs: ENST00000355497.10, ENST00000373474.9, ENST00000526117.6

Found 1039 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTCCCTGGGGATGACAAGGTCTCTGTGGGCAGGACACAGCCCCTaGCCAGGCTGTGCCCATCTACCGGTCTGGCTGTACCCAACGGGC +
Preference number: 1 (lower is better)
Translates to: GSLGMTRSLWAGHSP*PGCAHLPVWLYPTG
Trigger: GCCCGTTGGGTACAGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCATCCCCAGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp CAGGCTGTGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTaGTCAGGCCCAGCTGGCCGAGGGGAGGGCACCGTATGGCTGTCT +
Preference number: 1 (lower is better)
Translates to: QAVPIYRSGCTQRAQ*SGPAGRGEGTVWLS
Trigger: AGACAGCCATACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCACAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp CTCCCCGCCCAGCTCCCAGCCAAGGCTGCAGCTCCTCCCATAAAGTaGGAGAAGGTTGCCCAGCCCCACAGGCTTCTGCTGGGTGGCCCT +
Preference number: 1 (lower is better)
Translates to: LPAQLPAKAAAPPIK*EKVAQPHRLLLGGP
Trigger: AGGGCCACCCAGCAGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACTTTATGGGAGGAGCTGCAGCCTTGGCTGGGAGCTGGGCGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp CTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGTATGGCTGTCTGTAGTCTGTGCGGA +
Preference number: 1 (lower is better)
Translates to: LPVWLYPTGTVVRPS*PRGGHRMAVCSLCG
Trigger: TCCGCACAGACTACAGACAGCCATACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp TTAGTGATGAAGGTTCCATGTCACGGCACGGGCAAGGGGTGGTCCTaGCTACTCCCCGCCCAGCTCCCAGCCAAGGCTGCAGCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: LVMKVPCHGTGKGWS*LLPAQLPAKAAAPP
Trigger: GGGAGGAGCTGCAGCCTTGGCTGGGAGCTGGGCGGGGAGTAGCCAGGACCACCCCTTGCCCGTGCCGTGACATGGAACCTTCATCACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp TCCCTGCCCAGGCTGCCCCCATTTGGGCCCAGGCTGGGATACAACTaGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCCCCTTCCTCCC +
Preference number: 1 (lower is better)
Translates to: SLPRLPPFGPRLGYN*VRCFKFASSSPLPP
Trigger: GGGAGGAAGGGGAGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp GGGTGTCTCTCCAGAAGCCAGTGCAGCTGCTGCTCAAGAGACCCATaGTGGCACGGACCCTGGTGGGCTGAGGCGGCAGAAGGACCAGAA +
Preference number: 1 (lower is better)
Translates to: GCLSRSQCSCCSRDP*WHGPWWAEAAEGPE
Trigger: TTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAGACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp CCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACACCTCAGGTaGGACCCAGGGCCAACTCCTCACTGGGCAGATGTGCTGGGAGAG +
Preference number: 1 (lower is better)
Translates to: PMSNRERPARSTHLR*DPGPTPHWADVLGE
Trigger: CTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCCTGGGTCTCACCTGAGGTGTGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp AGCCAGTGCAGCTGCTGCTCAAGAGACCCATGGTGGCACGGACCCTaGTGGGCTGAGGCGGCAGAAGGACCAGAACATCAACTGAGGTCC +
Preference number: 1 (lower is better)
Translates to: SQCSCCSRDPWWHGP*WAEAAEGPEHQLRS
Trigger: GGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp AGTCTGTGGGTCACAAGCATGCTGTCCCTAGACCAGCTCCTGGCATaGGGTCCCGGCTGGATTCGGGGGTTTGTGAGGCCCCAGAATGGG +
Preference number: 1 (lower is better)
Translates to: SLWVTSMLSLDQLLA*GPGWIRGFVRPQNG
Trigger: CCCATTCTGGGGCCTCACAAACCCCCGAATCCAGCCGGGACCCCATGCCAGGAGCTGGTCTAGGGACAGCATGCTTGTGACCCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp GTGCCTGCTCACTTCTGGCCGGCTGACATCAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTTAGAGGGACAGCCGGAGGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: VPAHFWPADISGKVK*YLPHTFRGTAGGLL
Trigger: CAGCAGGCCTCCGGCTGTCCCTCTAAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACTGATGTCAGCCGGCCAGAAGTGAGCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp CAGCTGCTGCTCAAGAGACCCATGGTGGCACGGACCCTGGTGGGCTaGGGCGGCAGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAG +
Preference number: 1 (lower is better)
Translates to: QLLLKRPMVARTLVG*GGRRTRTSTEVLGE
Trigger: CTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp CTTCCCAAAGGAGAAGAGGCTTGTCCCTGCCAGGCCCTGCTCATCTaGTGCAGCGCCAGGGCCTTCCCACCTTTACCCACCCTCAGGAAG +
Preference number: 1 (lower is better)
Translates to: LPKGEEACPCQALLI*CSARAFPPLPTLRK
Trigger: CTTCCTGAGGGTGGGTAAAGGTGGGAAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp CAAAAGGAGAAAGAGGGGTGTCTCTCCAGAAGCCAGTGCAGCTGCTaGTCAAGAGACCCATGGTGGCACGGACCCTGGTGGGCTGAGGCG +
Preference number: 1 (lower is better)
Translates to: QKEKEGCLSRSQCSC*SRDPWWHGPWWAEA
Trigger: CGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAGACACCCCTCTTTCTCCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp CCAGGGCCTTCCCACCTTTACCCACCCTCAGGAAGCCTCCTAAGATaGCCAGCCACGTGCACCAACCCCCTTTCTGAGCTCTTTCCAGGC +
Preference number: 1 (lower is better)
Translates to: PGPSHLYPPSGSLLR*PATCTNPLSELFPG
Trigger: GCCTGGAAAGAGCTCAGAAAGGGGGTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCCTGAGGGTGGGTAAAGGTGGGAAGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp CAGTGCAGCTGCTGCTCAAGAGACCCATGGTGGCACGGACCCTGGTaGGCTGAGGCGGCAGAAGGACCAGAACATCAACTGAGGTCCTTG +
Preference number: 1 (lower is better)
Translates to: QCSCCSRDPWWHGPW*AEAAEGPEHQLRSL
Trigger: CAAGGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp TGTCTCTCCAGAAGCCAGTGCAGCTGCTGCTCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCTGAGGCGGCAGAAGGACCAGAACAT +
Preference number: 1 (lower is better)
Translates to: CLSRSQCSCCSRDPW*HGPWWAEAAEGPEH
Trigger: ATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp CCTTGCTGGGGCACAGGTACACACGCTTCTCAGGTCACCGCCTCATaGCACCATTGTCCTGGGGCTTGCATGGAGGGCCATGGACACAGA +
Preference number: 1 (lower is better)
Translates to: PCWGTGTHASQVTAS*HHCPGACMEGHGHR
Trigger: TCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTGAGAAGCGTGTGTACCTGTGCCCCAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp AAGAAGAGCTGCAGAAGGGCTAGCTGGCTGCTGGGGCCCAATGGGTaGCACGAGGCCACATGTCAGGCAAGGAGGTTGGCCCAGGACATT +
Preference number: 1 (lower is better)
Translates to: KKSCRRASWLLGPNG*HEATCQARRLAQDI
Trigger: AATGTCCTGGGCCAACCTCCTTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCAGCTCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp TCCCAGGATAGCAGAGTACCTGGGAGGCTTCACGGAGTAGGCAGATaGGGCTCTGGCTGGGGCCATGCCCAGCTTTTTGTCCCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: SQDSRVPGRLHGVGR*GSGWGHAQLFVPPL
Trigger: CAGAGGAGGGACAAAAAGCTGGGCATGGCCCCAGCCAGAGCCTCATCTGCCTACTCCGTGAAGCCTCCCAGGTACTCTGCTATCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp CACACCTCAGGTGAGACCCAGGGCCAACTCCTCACTGGGCAGATGTaGTGGGAGAGAGGAGAGCAGTGGTCACTGAATCAGGGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: HTSGETQGQLLTGQM*WERGEQWSLNQGAE
Trigger: CTCTGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCCTGGGTCTCACCTGAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp CACCTTTACCCACCCTCAGGAAGCCTCCTAAGATGCCCAGCCACGTaGACCAACCCCCTTTCTGAGCTCTTTCCAGGCTGTGCTGGCACC +
Preference number: 1 (lower is better)
Translates to: HLYPPSGSLLRCPAT*TNPLSELFPGCAGT
Trigger: GGTGCCAGCACAGCCTGGAAAGAGCTCAGAAAGGGGGTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCCTGAGGGTGGGTAAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp ATTCAGATGGGGGCAGAGTGGGGAATCAGCCTCTTGCTAGGAGGCTaGAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCCTGCCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: IQMGAEWGISLLLGG*RASQRRRGLSLPGP
Trigger: AGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp CAGCAGGTGCTTCTGAAGTCCCTGACCCCTGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAG +
Preference number: 1 (lower is better)
Translates to: QQVLLKSLTPGGSVV*SDATWFWGLHLPLE
Trigger: CTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTCAGAAGCACCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp GAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTGCTaGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGAGGT +
Preference number: 1 (lower is better)
Translates to: EALFVRRAAEGLAGC*GPMGDTRPHVRQGG
Trigger: ACCTCCTTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp GTCCCTTCCAACTTATTGGGTCTGAGAGAGAAGGGCCAGGTCTCCTaGGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTG +
Preference number: 1 (lower is better)
Translates to: VPSNLLGLREKGQVS*GIGHLPLNLPRMSL
Trigger: CAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCCCAGGAGACCTGGCCCTTCTCTCTCAGACCCAATAAGTTGGAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp CTGTGCTGGCACCTTGGTCTGACTCTTGTGAGCAGTGTCTCTGTGTaGCCTCCCTGTGCGTTTCCCAGGATAGCAGAGTACCTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: LCWHLGLTLVSSVSV*PPCAFPRIAEYLGG
Trigger: GCCTCCCAGGTACTCTGCTATCCTGGGAAACGCACAGGGAGGCCACACAGAGACACTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp GCACCAACCCCCTTTCTGAGCTCTTTCCAGGCTGTGCTGGCACCTTaGTCTGACTCTTGTGAGCAGTGTCTCTGTGTGGCCTCCCTGTGC +
Preference number: 1 (lower is better)
Translates to: APTPFLSSFQAVLAP*SDSCEQCLCVASLC
Trigger: GCACAGGGAGGCCACACAGAGACACTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAGAGCTCAGAAAGGGGGTTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp GGCCTAGGGCTTGACCTCAGAGTTAAAGGTAGGGTTGTGAGCACCTaGACAAGGGGACACAGTGATCACCAGGGGACAGGGTGGGCTCAC +
Preference number: 1 (lower is better)
Translates to: GLGLDLRVKGRVVST*TRGHSDHQGTGWAH
Trigger: GTGAGCCCACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTTCAGGTGCTCACAACCCTACCTTTAACTCTGAGGTCAAGCCCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp TGCCTGGCCTCCTTTTCTCTTTCTGACAAGGCAGGACAGACCCGCTaGGCATCCCTGTCCCTTCTGGTGTCCCCATACAGCTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: CLASFSLSDKAGQTR*ASLSLLVSPYSCVC
Trigger: ACACACACAGCTGTATGGGGACACCAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAGGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 90 bp ACGGACCCTGGTGGGCTGAGGCGGCAGAAGGACCAGAACATCAACTaGGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: TDPGGLRRQKDQNIN*GPWRGSVCKKSCRR
Trigger: CCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp GTTCCCTGCGTGCAACATGAAAAGGACATTCAGATGGGGGCAGAGTaGGGAATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGG +
Preference number: 1 (lower is better)
Translates to: VPCVQHEKDIQMGAE*GISLLLGGCRASQR
Trigger: CCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTGAATGTCCTTTTCATGTTGCACGCAGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp AGAAGGGGGCAGGAAATGCAATTGGAATGTGTCCCCCAAAGAGGATaGATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCC +
Preference number: 1 (lower is better)
Translates to: RRGQEMQLECVPQRG*INGPMSNRERPARS
Trigger: GGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCTTTGGGGGACACATTCCAATTGCATTTCCTGCCCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp TGTGGCCAAATCATTGTCTTTTGGGCCAAATTAACAGAGGAAGGGTaGCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCT +
Preference number: 1 (lower is better)
Translates to: CGQIIVFWAKLTEEG*HSRRGDVPAHFWPA
Trigger: AGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 90 bp CTGACACAATCTTCTGCAATTGCCCTGGGAGAAGGGGGCAGGAAATaGAATTGGAATGTGTCCCCCAAAGAGGATGCATTAATGGGCCAA +
Preference number: 1 (lower is better)
Translates to: LTQSSAIALGEGGRK*NWNVSPKEDALMGQ
Trigger: TTGGCCCATTAATGCATCCTCTTTGGGGGACACATTCCAATTGCATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 90 bp GGGCAGGGTGAATCTCTAAGGTCATGTGGCCAAATCATTGTCTTTTaGGCCAAATTAACAGAGGAAGGGTGCCACAGCAGGAGAGGTGAT +
Preference number: 1 (lower is better)
Translates to: GQGESLRSCGQIIVF*AKLTEEGCHSRRGD
Trigger: ATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGGCCACATGACCTTAGAGATTCACCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGGCTGGGAGGCGAGTaGCCGTCCGAGAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQGLGGE*PSESSG
Trigger: CCCAGAGCTCTCGGACGGCCACTCGCCTCCCAGCCC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCCTCCCTGCCCAGGCTaGCCCCATTTGGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLPPCPG*PHLGPG
Trigger: GCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGGCTGGGAGGCGAGTaGCCGTCCGAGAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGLGGE*PSESSG
Trigger: CCCAGAGCTCTCGGACGGCCACTCGCCTCCCAGCCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCGATGGAGGCCGAGGTaGGGCTGGGAGGCGAGTGGC +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRRWRPR*GWEASG
Trigger: GCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGTGCGGTTCCAGGCAGTaGGCCTGCCCCCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLCGSRQ*ACPQRP
Trigger: TGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCA...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGCTCCAGACTCAGGCTaGGGGGTGTGCGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLAPDSG*GVCGSR
Trigger: CCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTCCGAGCCCGCCTCCTaGCAGTGCCTCCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSEPAS*QCLPSG
Trigger: GCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCGGACCCTGGTGGGCTaGGGCGGCAGAAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRRTLVG*GGRRTR
Trigger: TCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTCCAGGCAGTGGGCCTaGCCCCAGAGGCCACCCCTG +
Preference number: 2 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRSRQWA*PQRPPL
Trigger: CAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCTGTCCCTTTGCGCCTaGCCAGGCTCAGGCTCCGAG +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLLSLCA*PGSGSE
Trigger: CTCGGAGCCTGAGCCTGGGCAGGCGCAAAGGGACAG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGT +
Preference number: 2 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLVVRPS*PRGGHR
Trigger: ACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCAC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCGATGGAGGCCGAGGTaGGGCTGGGAGGCGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLRWRPR*GWEASG
Trigger: GCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGCAGGACAGACCCGCTaGGCATCCCTGTCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLAGQTR*ASLSLL
Trigger: CAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCAGGCCCTGCTCATCTaGTGCAGCGCCAGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRQALLI*CSARAF
Trigger: GAAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCCCCTGCCCAGGCTGTaGCCATCTACCGGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPPLPRL*PSTGLA
Trigger: AGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCAGGACACAGCCCCTaGCCAGGCTGTGCCCATCTA +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGAGHSP*PGCAHL
Trigger: TAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGCCGTCCGAGAGCTCTaGGTCCCTGGGGATGACAAG +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLAVREL*VPGDDK
Trigger: CTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCAGGCCGAGGTGGGGCTaGGAGGCGAGTGGCCGTCCG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGRPRWG*EASGRP
Trigger: CGGACGGCCACTCGCCTCCCAGCCCCACCTCGGCCT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGGCCGAGGTGGGGCTaGGAGGCGAGTGGCCGTCCG +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICRPRWG*EASGRP
Trigger: CGGACGGCCACTCGCCTCCCAGCCCCACCTCGGCCT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTGCGGTTCCAGGCAGTaGGCCTGCCCCCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLCGSRQ*ACPQRP
Trigger: TGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGTGGCACGGACCCTGGTaGGCTGAGGCGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQWHGPW*AEAAEG
Trigger: TCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCA...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGGTCCCTGCCATGTCTaGACTCTCTGGCTGGGCCGG +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRGPCHV*TLWLGR
Trigger: CCGGCCCAGCCAGAGAGTCCAGACATGGCAGGGACC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 90 bp CTGGCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTaGTTCATCTGCGAGCCACACCCAGTCCGGGGCTGGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LAFLLGDTPQGRPCI*FICEPHPVRGWAEW
Trigger: CCACTCTGCCCAGCCCCGGACTGGGTGTGGCTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 90 bp AGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTaGTCCCTGCCAGGCCCTGCTCATCTGATGCAGCGCCAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: SLLLGGCRASQRRRG*SLPGPAHLMQRQGL
Trigger: AAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCTCCAGACTCAGGCTaGGGGGTGTGCGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSAPDSG*GVCGSR
Trigger: CCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTCCGAGCCCGCCTCCTaGCAGTGCCTCCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSEPAS*QCLPSG
Trigger: GCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCCCCTGCCCAGGCTGTaGCCATCTACCGGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSPLPRL*PSTGLA
Trigger: AGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTCCAGGCAGTGGGCCTaGCCCCAGAGGCCACCCCTG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGSRQWA*PQRPPL
Trigger: CAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGA...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATCCAGGCAGTGGGCCTaGCCCCAGAGGCCACCCCTG +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASRQWA*PQRPPL
Trigger: CAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCTGTCCCTTTGCGCCTaGCCAGGCTCAGGCTCCGAG +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLLSLCA*PGSGSE
Trigger: CTCGGAGCCTGAGCCTGGGCAGGCGCAAAGGGACAG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGCCTCTCTGTCCCTTTaGGCCTGCCCAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRASLSL*ACPGSG
Trigger: GCCTGAGCCTGGGCAGGCGCAAAGGGACAGAGAGGC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACCTCCCTGCCCAGGCTaGCCCCATTTGGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTPPCPG*PHLGPG
Trigger: GCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGGACAGCCGGAGGCCTaGTGGGGGACAGTGTTAAGA +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLGQPEA*WGTVLR
Trigger: TCTTAACACTGTCCCCCAGCAGGCCTCCGGCTGTCC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGAAGGGCTAGCTGGCTaGTGGGGCCCAATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPEGLAG*WGPMGD
Trigger: GTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGGAGGGCACCGTATaGCTGTCTGTAGTCTGTGCG +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGGEGTV*LSVVCA
Trigger: CGCACAGACTACAGACAGCCATACGGTGCCCTCCCC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCCCATCTACCGGTCTaGCTGTACCCAACGGGCACA +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGAHLPV*LYPTGT
Trigger: TGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCGATGGAGGCCGAGGTaGGGCTGGGAGGCGAGTGGC +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGRWRPR*GWEASG
Trigger: GCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTATGGGGAGGAGGCGATaGAGGCCGAGGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASMGRRR*RPRWGW
Trigger: CCAGCCCCACCTCGGCCTCCATCGCCTCCTCCCCAT...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTATGGGGAGGAGGCGATaGAGGCCGAGGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSMGRRR*RPRWGW
Trigger: CCAGCCCCACCTCGGCCTCCATCGCCTCCTCCCCAT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTCCTGGGGCTTGCATaGAGGGCCATGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGVLGLA*RAMDTE
Trigger: CTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGAC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCACCCCTGCCCTTGCTaGGGCACAGGTACACACGCT +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRHPCPC*GTGTHA
Trigger: AGCGTGTGTACCTGTGCCCCAGCAAGGGCAGGGGTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAACAGTAAGTGCAGACTaGGTGCGGTGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQTVSAD*VRWLTP
Trigger: AGGCGTGAGCCACCGCACCCAGTCTGCACTTACTGT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCAGGTCACCGCCTCATaGCACCATTGTCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRQVTAS*HHCPGA
Trigger: AGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCCCCTAGCCACGGCTaGCAGGGCGCCTCCAGCATA +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICAPSHG*QGASSI
Trigger: TATGCTGGAGGCGCCCTGTCAGCCGTGGCTAGGGGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGCTGTCTGTAGTCTGTaGGGAGAGCAGGGCGGGGGT +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLAVCSL*GEQGGG
Trigger: ACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGCCTCTCTGTCCCTTTaGGCCTGCCCAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASASLSL*ACPGSG
Trigger: GCCTGAGCCTGGGCAGGCGCAAAGGGACAGAGAGGC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGGGAGAGGACCACATTaGAGATGGGGTGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPGRGPH*RWGAQQ
Trigger: CTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGCTTAGCTGTCACTTaGGTGTGGGGCCCAGGGATT +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGLAVT*VWGPGI
Trigger: AATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGCCCATCTACCGGTCTaGCTGTACCCAACGGGCACA +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQAHLPV*LYPTGT
Trigger: TGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCCGTCCGAGAGCTCTaGGTCCCTGGGGATGACAAG +
Preference number: 2 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSAVREL*VPGDDK
Trigger: CTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCATGGGGAGGAGGCGATaGAGGCCGAGGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGMGRRR*RPRWGW
Trigger: CCAGCCCCACCTCGGCCTCCATCGCCTCCTCCCCAT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATGCGGTTCCAGGCAGTaGGCCTGCCCCCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSACGSRQ*ACPQRP
Trigger: TGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACATTTGGGCCCAGGCTaGGATACAACTGGGTCCGAT +
Preference number: 2 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQHLGPG*DTTGSD
Trigger: ATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGATGCTACCTGGTTCTaGGGGCTCCATCTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQDATWF*GLHLPL
Trigger: TAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGAAGTCCCTGACCCCTaGAGGCTCTGTTGTCTGGTC +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGEVPDP*RLCCLV
Trigger: GACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGACTGGGCAGATGTGCTaGGAGAGAGGAGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGTGQMC*ERGEQW
Trigger: CCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGT...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCACCAGGGGACAGGGTaGGCTCACCAGTCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVHQGTG*AHQSGP
Trigger: GGGGCCTGACTGGTGAGCCCACCCTGTCCCCTGGTG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTGCAGAAGGGCTAGCTaGCTGCTGGGGCCCAATGGG +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLCRRAS*LLGPNG
Trigger: CCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGTGCTCAAGAGACCCATaGTGGCACGGACCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQCSRDP*WHGPWW
Trigger: CCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCA...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCACCCAGTCCGGGGCTaGGCAGAGTGGGCACTGGTG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVHPVRG*AEWALV
Trigger: CACCAGTGCCCACTCTGCCCAGCCCCGGACTGGGTG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCAGGTCACCGCCTCATaGCACCATTGTCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRQVTAS*HHCPGA
Trigger: AGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCTCCAGACTCAGGCTaGGGGGTGTGCGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAPDSG*GVCGSR
Trigger: CCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCTCTGTTGTCTGGTCTaGTGCTACCTGGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGLCCLV*CYLVLG
Trigger: CCCCAGAACCAGGTAGCATCAGACCAGACAACAGAG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGATCGCCTCCCTTCTCTaGGCCTCAGGCTCCTCATCT +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRIASLL*ASGSSS
Trigger: AGATGAGGAGCCTGAGGCTCAGAGAAGGGAGGCGAT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGCAGGACACAGCCCCTaGCCAGGCTGTGCCCATCTA +
Preference number: 2 (lower is better)
Translates to: RVGPRDLATAGQGESLRSAGHSP*PGCAHL
Trigger: TAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCAGGCCCCTCTCCACTaGTGCTCCAGACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSQAPLH*CSRLRL
Trigger: CAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCTGTCCCTTTGCGCCTaGCCAGGCTCAGGCTCCGAG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVLSLCA*PGSGSE
Trigger: CTCGGAGCCTGAGCCTGGGCAGGCGCAAAGGGACAG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGCCTCTCTGTCCCTTTaGGCCTGCCCAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAASLSL*ACPGSG
Trigger: GCCTGAGCCTGGGCAGGCGCAAAGGGACAGAGAGGC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGCATGTGTCTGCACGTaGCTCTCTGTCCCTTTGCGC +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPACVCT*LSVPLR
Trigger: GCGCAAAGGGACAGAGAGGCACGTGCAGACACATGC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCCTCCCTGCCCAGGCTaGCCCCATTTGGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKPPCPG*PHLGPG
Trigger: GCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAGCCTGGCTCTGGGATaGAGGACAGCACAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSLALG*RTAQLL
Trigger: CAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGAGCCAGTGCAGCTGCTaGTCAAGAGACCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQSQCSC*SRDPWW
Trigger: CCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCATGACAAGGTCTCTGTaGGCAGGACACAGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPMTRSL*AGHSPC
Trigger: GCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCAT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGTCCTGGGGCTTGCATaGAGGGCCATGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLVLGLA*RAMDTE
Trigger: CTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGAC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCATTTGGGCCCAGGCTaGGATACAACTGGGTCCGAT +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGHLGPG*DTTGSD
Trigger: ATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGAACCACAGGGGACAGTaGGGCACAACGTCCCTGTTC +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRNHRGQ*GTTSLF
Trigger: GAACAGGGACGTTGTGCCCCACTGTCCCCTGTGGTT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 90 bp GGGCACAGGTACACACGCTTCTCAGGTCACCGCCTCATGACACCATaGTCCTGGGGCTTGCATGGAGGGCCATGGACACAGAGAGGACAT +
Preference number: 2 (lower is better)
Translates to: GHRYTRFSGHRLMTP*SWGLHGGPWTQRGH
Trigger: ATGTCCTCTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTGAGAAGCGTGTGTACCTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACTGGGTCCCTGGGGATaGCAAGGTCTCTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSALGPWG*QGLCGQ
Trigger: CTGCCCACAGAGACCTTGTCATCCCCAGGGACCCAG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCTGGGTCCCTGGGGATaGCAAGGTCTCTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLGPWG*QGLCGQ
Trigger: CTGCCCACAGAGACCTTGTCATCCCCAGGGACCCAG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCTCCTTTTCTCTTTCTaGCAAGGCAGGACAGACCCG +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGLLFSF*QGRTDP
Trigger: CGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTT +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGSGKVK*YLPHTF
Trigger: AAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACT...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGGCATCAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPGIRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAACAAGGGGACACAGTaGTCACCAGGGGACAGGGTG +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLNKGTQ*SPGDRV
Trigger: CACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGCTGTCTGTAGTCTGTaGGGAGAGCAGGGCGGGGGT +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAAVCSL*GEQGGG
Trigger: ACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCTGTCTGTAGTCTGTaGGGAGAGCAGGGCGGGGGT +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICAVCSL*GEQGGG
Trigger: ACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCAGGACACAGCCCCTaGCCAGGCTGTGCCCATCTA +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAGHSP*PGCAHL
Trigger: TAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACAGGCCCCTCTCCACTaGTGCTCCAGACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTQAPLH*CSRLRL
Trigger: CAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGACATTGCAGATGGGGTaGCCAGCAGGTGCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLTLQMG*PAGASE
Trigger: TTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGT...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGCCTGGCTCTGGGATaGAGGACAGCACAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSLALG*RTAQLL
Trigger: CAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGGCTTAGCTGTCACTTaGGTGTGGGGCCCAGGGATT +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLGLAVT*VWGPGI
Trigger: AATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGAAGGGGGCAGGAAATaGAATTGGAATGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGEGGRK*NWNVSP
Trigger: GGGGGACACATTCCAATTGCATTTCCTGCCCCCTTC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCAGAAGCCAGTGCAGCTaGTGCTCAAGAGACCCATGG +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPRSQCS*CSRDPW
Trigger: CCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGCTCTCCAGAAGCCAGTaGAGCTGCTGCTCAAGAGAC +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQLSRSQ*SCCSRD
Trigger: GTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAG...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCTCTCCAGAAGCCAGTaGAGCTGCTGCTCAAGAGAC +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPLSRSQ*SCCSRD
Trigger: GTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCTCAAGGCAGGCCCTaGATCTTGTTCATCTGCGAG +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPQGRP*ILFICE
Trigger: CTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTGTGTGGCCTCCCTGTaGGTTTCCCAGGATAGCAGA +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRCVASL*VSQDSR
Trigger: TCTGCTATCCTGGGAAACGCACAGGGAGGCCACACA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCATCCCTGTCCCTTCTaGTGTCCCCATACAGCTGTG +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRHPCPF*CPHTAV
Trigger: CACAGCTGTATGGGGACACCAGAAGGGACAGGGATG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAATCGCTCTTAAGAACTaGGGGGTCCCCTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: RVGPRDLATAGQGESLRSIALKN*GVPCLA
Trigger: GGCCAGGCAGGGGACCCCCCAGTTCTTAAGAGCGAT...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACAGGCTGCCCCCATTTaGGCCCAGGCTGGGATACAA +
Preference number: 2 (lower is better)
Translates to: RVGPRDLATAGQGESLRSQAAPI*AQAGIQ
Trigger: TTGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTGGTCTGATGCTACCTaGTTCTGGGGGCTCCATCTG +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRWSDAT*FWGLHL
Trigger: CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGGAGGCAGAGGTGGCTaGGGAGAGGACCACATTGCA +
Preference number: 2 (lower is better)
Translates to: RVGPRDLATAGQGESLRSGGRGG*GEDHIA
Trigger: TGCAATGTGGTCCTCTCCCCAGCCACCTCTGCCTCC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGACTGGGCAGATGTGCTaGGAGAGAGGAGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLTGQMC*ERGEQW
Trigger: CCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGCCCAGGATGTCCCTaGCACGATTCAGATGGTGCA +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPCPGCP*HDSDGA
Trigger: TGCACCATCTGAATCGTGCCAGGGACATCCTGGGCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTCCTTTTCTCTTTCTaGCAAGGCAGGACAGACCCG +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLLFSF*QGRTDP
Trigger: CGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTT +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPSGKVK*YLPHTF
Trigger: AAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCAAGTTGTGACCCCCTaGCCTGGAGGTCATTCACAA +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRQVVTP*PGGHSQ
Trigger: TTGTGAATGACCTCCAGGTCAGGGGGTCACAACTTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGCATGTGTCTGCACGTaGCTCTCTGTCCCTTTGCGC +
Preference number: 2 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASACVCT*LSVPLR
Trigger: GCGCAAAGGGACAGAGAGGCACGTGCAGACACATGC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGAAGTGTGCATGTGTCTaGACGTGCCTCTCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQKCACV*TCLSVP
Trigger: AGGGACAGAGAGGCACGTGCAGACACATGCACACTT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGACATTGCAGATGGGGTaGCCAGCAGGTGCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: GDRASAPESAQDVPGTIQTLQMG*PAGASE
Trigger: TTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGGGAGAGGACCACATTaGAGATGGGGTGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICGRGPH*RWGAQQ
Trigger: CTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCAGCCTGGCTCTGGGATaGAGGACAGCACAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGSLALG*RTAQLL
Trigger: CAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGGACAGCCGGAGGCCTaGTGGGGGACAGTGTTAAGA +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTGQPEA*WGTVLR
Trigger: TCTTAACACTGTCCCCCAGCAGGCCTCCGGCTGTCC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGAGTCTAAACAGTAAGTaGAGACTGGGTGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGSLNSK*RLGAVA
Trigger: AGCCACCGCACCCAGTCTGCACTTACTGTTTAGACT...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGAAGGGGGCAGGAAATaGAATTGGAATGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPEGGRK*NWNVSP
Trigger: GGGGGACACATTCCAATTGCATTTCCTGCCCCCTTC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGGGGAGGGCACCGTATaGCTGTCTGTAGTCTGTGCG +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTGEGTV*LSVVCA
Trigger: CGCACAGACTACAGACAGCCATACGGTGCCCTCCCC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGGGGAGGGCACCGTATaGCTGTCTGTAGTCTGTGCG +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICGEGTV*LSVVCA
Trigger: CGCACAGACTACAGACAGCCATACGGTGCCCTCCCC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCCCATCTACCGGTCTaGCTGTACCCAACGGGCACA +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAHLPV*LYPTGT
Trigger: TGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTATGACAAGGTCTCTGTaGGCAGGACACAGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASMTRSL*AGHSPC
Trigger: GCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCAT...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAGGCCGAGGTGGGGCTaGGAGGCGAGTGGCCGTCCG +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRRPRWG*EASGRP
Trigger: CGGACGGCCACTCGCCTCCCAGCCCCACCTCGGCCT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTCCTGGGGCTTGCATaGAGGGCCATGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVLGLA*RAMDTE
Trigger: CTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGATGACACCATTGTCCTaGGGCTTGCATGGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLMTPLS*GLHGGP
Trigger: TGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCAT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCATCGCTCTTAAGAACTaGGGGGTCCCCTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICIALKN*GVPCLA
Trigger: GGCCAGGCAGGGGACCCCCCAGTTCTTAAGAGCGAT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGGAGGCAGAGGTGGCTaGGGAGAGGACCACATTGCA +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGGGRGG*GEDHIA
Trigger: TGCAATGTGGTCCTCTCCCCAGCCACCTCTGCCTCC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGGGCCAACTCCTCACTaGGCAGATGTGCTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGGPTPH*ADVLGE
Trigger: CTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGCAGGAAATGCAATTaGAATGTGTCCCCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQGRKCN*NVSPKE
Trigger: CTCTTTGGGGGACACATTCCAATTGCATTTCCTGCC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTTCTGCAATTGCCCTaGGAGAAGGGGGCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLLQLP*EKGAGN
Trigger: ATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCTTCTGCAATTGCCCTaGGAGAAGGGGGCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPLLQLP*EKGAGN
Trigger: ATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVSRDPW*HGPWWA
Trigger: AGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSRDPW*HGPWWA
Trigger: AGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTGCTCAAGAGACCCATaGTGGCACGGACCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVCSRDP*WHGPWW
Trigger: CCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTGTGACCCCCTGACCTaGAGGTCATTCACAAACCAC +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRCDPLT*RSFTNH
Trigger: GTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTTTCCAGGCTGTGCTaGCACCTTGGTCTGACTCTT +
Preference number: 2 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLSRLC*HLGLTL
Trigger: AAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATCCGAGCCCGCCTCCTaGCAGTGCCTCCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRSEPAS*QCLPSG
Trigger: GCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGAGAGCAGTGGTCACTaGATCAGGGTGCAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPESSGH*IRVQRN
Trigger: ATTTCTCTGCACCCTGATTCAGTGACCACTGCTCTC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGACCAGAACATCAACTaGGGTCCTTGGAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLDQNIN*GPWRGS
Trigger: AGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCATGTGTCTGCACGTaGCTCTCTGTCCCTTTGCGC +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICACVCT*LSVPLR
Trigger: GCGCAAAGGGACAGAGAGGCACGTGCAGACACATGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAAGTGTGCATGTGTCTaGACGTGCCTCTCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLKCACV*TCLSVP
Trigger: AGGGACAGAGAGGCACGTGCAGACACATGCACACTT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGGCTTAGCTGTCACTTaGGTGTGGGGCCCAGGGATT +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICGLAVT*VWGPGI
Trigger: AATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCTCACTGGGCAGATGTaGTGGGAGAGAGGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLTGQM*WERGEQ
Trigger: CTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGCCAGTGCAGCTGCTaGTCAAGAGACCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSQCSC*SRDPWW
Trigger: CCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGT +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRVVRPS*PRGGHR
Trigger: ACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCAC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCATGACAAGGTCTCTGTaGGCAGGACACAGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICMTRSL*AGHSPC
Trigger: GCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCAT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCATCCCTGTCCCTTCTaGTGTCCCCATACAGCTGTG +
Preference number: 2 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASHPCPF*CPHTAV
Trigger: CACAGCTGTATGGGGACACCAGAAGGGACAGGGATG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGAAGTCCCTGACCCCTaGAGGCTCTGTTGTCTGGTC +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTEVPDP*RLCCLV
Trigger: GACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGTTAAGAGGGAGAGCTaGGGAAGCCTGGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTVKRES*GSLALG
Trigger: TCCCAGAGCCAGGCTTCCCCAGCTCTCCCTCTTAAC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGTTAAGAGGGAGAGCTaGGGAAGCCTGGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAVKRES*GSLALG
Trigger: TCCCAGAGCCAGGCTTCCCCAGCTCTCCCTCTTAAC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGAGAGAGGAGAGCAGTaGTCACTGAATCAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLERGEQ*SLNQGA
Trigger: TGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCACTGGGCAGATGTGCTaGGAGAGAGGAGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGTGQMC*ERGEQW
Trigger: CCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACTCCTTTTCTCTTTCTaGCAAGGCAGGACAGACCCG +
Preference number: 2 (lower is better)
Translates to: RVGPRDLATAGQGESLRSLLFSF*QGRTDP
Trigger: CGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCTCTGTTGTCTGGTCTaGTGCTACCTGGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLCCLV*CYLVLG
Trigger: CCCCAGAACCAGGTAGCATCAGACCAGACAACAGAG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTT +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSGKVK*YLPHTF
Trigger: AAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGCATCAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGIRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTACATTGCAGATGGGGTaGCCAGCAGGTGCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSTLQMG*PAGASE
Trigger: TTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGAAGGGGGCAGGAAATaGAATTGGAATGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSEGGRK*NWNVSP
Trigger: GGGGGACACATTCCAATTGCATTTCCTGCCCCCTTC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCAGAAGCCAGTGCAGCTaGTGCTCAAGAGACCCATGG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVRSQCS*CSRDPW
Trigger: CCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCATGACACCATTGTCCTaGGGCTTGCATGGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICMTPLS*GLHGGP
Trigger: TGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCAT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGATGCTACCTGGTTCTaGGGGCTCCATCTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTDATWF*GLHLPL
Trigger: TAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGCTGTGCTGGCACCTTaGTCTGACTCTTGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVAVLAP*SDSCEQ
Trigger: CTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTACAGCAGGGCAGGGTaGATCTCTAAGGTCATGTGG +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICYSRAG*ISKVMW
Trigger: CCACATGACCTTAGAGATTCACCCTGCCCTGCTGTA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGACCAGAACATCAACTaGGGTCCTTGGAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVDQNIN*GPWRGS
Trigger: AGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCAAGTGTGCATGTGTCTaGACGTGCCTCTCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGKCACV*TCLSVP
Trigger: AGGGACAGAGAGGCACGTGCAGACACATGCACACTT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCATTAACAGAGGAAGGGTaGCACAGCAGGAGAGGTGAT +
Preference number: 2 (lower is better)
Translates to: RVGPRDLATAGQGESLRSLTEEG*HSRRGD
Trigger: ATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAA...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTC +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICGGSVV*SDATWF
Trigger: GAACCAGGTAGCATCAGACCAGACAACAGAGCCTCC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTC +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAGGSVV*SDATWF
Trigger: GAACCAGGTAGCATCAGACCAGACAACAGAGCCTCC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTCGAGTAAGAAGGAATaGAAAAGGAAAGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGSSKKE*KRKEVT
Trigger: CGTGACCTCTTTCCTTTTCCATTCCTTCTTACTCGA...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGAGAGAGGAGAGCAGTaGTCACTGAATCAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: RGCINGPMSNRERPARSTERGEQ*SLNQGA
Trigger: TGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTGTGACCCCCTGACCTaGAGGTCATTCACAAACCAC +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICCDPLT*RSFTNH
Trigger: GTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACTGGGTCCCTGGGGATaGCAAGGTCTCTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRLGPWG*QGLCGQ
Trigger: CTGCCCACAGAGACCTTGTCATCCCCAGGGACCCAG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACTGGGGCCCAATGGGTaGCACGAGGCCACATGTCAG +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRLGPNG*HEATCQ
Trigger: CTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTACAACTGGGTCCGATaGTTCAAGTTCGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGYNWVR*FKFASS
Trigger: GGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTA...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCAAACAAAACAGTAGGTaGCCCCATCCTGCATATACA +
Preference number: 2 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPKQNSR*PHPAYT
Trigger: TGTATATGCAGGATGGGGGCACCTACTGTTTTGTTT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAAGTCTAAACAGTAAGTaGAGACTGGGTGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASLNSK*RLGAVA
Trigger: AGCCACCGCACCCAGTCTGCACTTACTGTTTAGACT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGTCACTGAATCAGGGTaGAGAGAAATTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSVTESG*REIPQA
Trigger: AGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGAC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCCTGACACAATCTTCTaGAATTGCCCTGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGPDTIF*NCPGRR
Trigger: CCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAGG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAGAGGGCCCCAAAGGTaGAAAAGGGACATTCATTAT +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLRGPQR*KRDIHY
Trigger: ATAATGAATGTCCCTTTTCCACCTTTGGGGCCCTCT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGTACAGCAGGGCAGGGTaGATCTCTAAGGTCATGTGG +
Preference number: 2 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKYSRAG*ISKVMW
Trigger: CCACATGACCTTAGAGATTCACCCTGCCCTGCTGTA...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAAACAAAACAGTAGGTaGCCCCATCCTGCATATACA +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLKQNSR*PHPAYT
Trigger: TGTATATGCAGGATGGGGGCACCTACTGTTTTGTTT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGTCACTGAATCAGGGTaGAGAGAAATTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICVTESG*REIPQA
Trigger: AGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGAC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTTCATTATCCTTACTTaGTCAAAGGTTGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLFIILT*SKVGPG
Trigger: GCCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCCTCTTTCCCTCTCTTaGCTCAGGGTTTCCAACTAT +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICPLSLS*LRVSNY
Trigger: ATAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAATCGCTCTTAAGAACTaGGGGGTCCCCTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRIALKN*GVPCLA
Trigger: GGCCAGGCAGGGGACCCCCCAGTTCTTAAGAGCGAT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTC +
Preference number: 2 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGGSVV*SDATWF
Trigger: GAACCAGGTAGCATCAGACCAGACAACAGAGCCTCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGGCAGGAAATGCAATTaGAATGTGTCCCCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAGRKCN*NVSPKE
Trigger: CTCTTTGGGGGACACATTCCAATTGCATTTCCTGCC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGCAGGAAATGCAATTaGAATGTGTCCCCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGRKCN*NVSPKE
Trigger: CTCTTTGGGGGACACATTCCAATTGCATTTCCTGCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAGGCTGGGATACAACTaGGTCCGATGCTTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKRLGYN*VRCFKF
Trigger: GAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCAAATCATTGTCTTTTaGGCCAAATTAACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: PQQPSLLALTGIELSRLGQIIVF*AKLTEE
Trigger: TTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCTGCCCTGTGTTACCTaGGGCAATTATTTCCTCTTT +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVLPCVT*GNYFLF
Trigger: AAAGAGGAAATAATTGCCCCAGGTAACACAGGGCAG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCAGCCCAGCCTCCTTaGTCTGACAGGGATAGAGTT +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRAAQPP*SDRDRV
Trigger: AACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACATCCCTGTCCCTTCTaGTGTCCCCATACAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRHPCPF*CPHTAV
Trigger: CACAGCTGTATGGGGACACCAGAAGGGACAGGGATG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATCGAGTAAGAAGGAATaGAAAAGGAAAGAGGTCACG +
Preference number: 2 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASSKKE*KRKEVT
Trigger: CGTGACCTCTTTCCTTTTCCATTCCTTCTTACTCGA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATACAACTGGGTCCGATaGTTCAAGTTCGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRYNWVR*FKFASS
Trigger: GGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAGGCTGGGATACAACTaGGTCCGATGCTTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRRLGYN*VRCFKF
Trigger: GAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCATCTCTAAGGTCATGTaGCCAAATCATTGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVISKVM*PNHCLL
Trigger: CAAAAGACAATGATTTGGCCACATGACCTTAGAGAT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCAAATCATTGTCTTTTaGGCCAAATTAACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: AFLLGDTPQGRPCILFICQIIVF*AKLTEE
Trigger: TTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCAAATCATTGTCTTTTaGGCCAAATTAACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGQIIVF*AKLTEE
Trigger: TTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp TGGTCAGGCCCAGCTGGCCGAGGGGAGGGCACCGTATaGCTGTCTGTAGTCTGTGCGGAGAGCAGGGCGGGG +
Preference number: 3 (lower is better)
Translates to: WSGPAGRGEGTV*LSVVCAESRAG
Trigger: CCCCGCCCTGCTCTCCGCACAGACTACAGACAGCCATACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTaGTCAGGCCCAGCTGGCCGAGGGGAGGGCACCGTA +
Preference number: 3 (lower is better)
Translates to: PIYRSGCTQRAQ*SGPAGRGEGTV
Trigger: TACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CACAGCCCCTGCCCAGGCTGTGCCCATCTACCGGTCTaGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: HSPCPGCAHLPV*LYPTGTVVRPS
Trigger: GCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp AAGGTTCCATGTCACGGCACGGGCAAGGGGTGGTCCTaGCTACTCCCCGCCCAGCTCCCAGCCAAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: KVPCHGTGKGWS*LLPAQLPAKAA
Trigger: TGCAGCCTTGGCTGGGAGCTGGGCGGGGAGTAGCCAGGACCACCCCTTGCCCGTGCCGTGACATGGAACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACCAGGCTGCCCCCATTaGGGCCCAGGCTGGGATACA +
Preference number: 3 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQPGCPH*GPGWDT
Trigger: TGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTGG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp GGTTGCCCAGCCCCACAGGCTTCTGCTGGGTGGCCCTaGACACATCGCCTCCCTTCTCTGAGCCTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: GCPAPQASAGWP*THRLPSLSLRL
Trigger: GAGCCTGAGGCTCAGAGAAGGGAGGCGATGTGTTCAGGGCCACCCAGCAGAAGCCTGTGGGGCTGGGCAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp TGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGTATGGCTGTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: WLYPTGTVVRPS*PRGGHRMAVCS
Trigger: ACTACAGACAGCCATACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCCAGGCTGCCCCCATTaGGGCCCAGGCTGGGATACA +
Preference number: 3 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGPGCPH*GPGWDT
Trigger: TGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTGG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp AGGCACAGCATAGAGCAAGGGGCCCCTAGCCACGGCTaGCAGGGCGCCTCCAGCATAAGGGACTCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: RHSIEQGAPSHG*QGASSIRDSLR
Trigger: CCTCAGAGAGTCCCTTATGCTGGAGGCGCCCTGTCAGCCGTGGCTAGGGGCCCCTTGCTCTATGCTGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp GGAGAAGAGGCTTGTCCCTGCCAGGCCCTGCTCATCTaGTGCAGCGCCAGGGCCTTCCCACCTTTACCCACC +
Preference number: 3 (lower is better)
Translates to: GEEACPCQALLI*CSARAFPPLPT
Trigger: GGTGGGTAAAGGTGGGAAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTGGCAGGGACAAGCCTCTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp GGGCTCACCAGTCAGGCCCCAGCAGCCCAGCCTCCTTaGTCTGACAGGGATAGAGTTGAGCAGACTGGGGCT +
Preference number: 3 (lower is better)
Translates to: GLTSQAPAAQPP*SDRDRVEQTGA
Trigger: AGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGCCTGACTGGTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp AGAAGCCAGTGCAGCTGCTGCTCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCTGAGGCGGCAGAAGGA +
Preference number: 3 (lower is better)
Translates to: RSQCSCCSRDPW*HGPWWAEAAEG
Trigger: TCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp GTCACAAGCATGCTGTCCCTAGACCAGCTCCTGGCATaGGGTCCCGGCTGGATTCGGGGGTTTGTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: VTSMLSLDQLLA*GPGWIRGFVRP
Trigger: GGGCCTCACAAACCCCCGAATCCAGCCGGGACCCCATGCCAGGAGCTGGTCTAGGGACAGCATGCTTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp AGGCAGAGGTGGCTGGGGAGAGGACCACATTGCAGATaGGGTGCCCAGCAGGTGCTTCTGAAGTCCCTGACC +
Preference number: 3 (lower is better)
Translates to: RQRWLGRGPHCR*GAQQVLLKSLT
Trigger: GGTCAGGGACTTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCCCAGCCACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp AGTGGGAGAAGGTTGCCCAGCCCCACAGGCTTCTGCTaGGTGGCCCTGAACACATCGCCTCCCTTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: SGRRLPSPTGFC*VALNTSPPFSE
Trigger: CTCAGAGAAGGGAGGCGATGTGTTCAGGGCCACCCAGCAGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CAGCTCCCAGCCAAGGCTGCAGCTCCTCCCATAAAGTaGGAGAAGGTTGCCCAGCCCCACAGGCTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: QLPAKAAAPPIK*EKVAQPHRLLL
Trigger: CAGCAGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACTTTATGGGAGGAGCTGCAGCCTTGGCTGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAAGGCATCAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQRHQNH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCCT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp CTCAAGAGACCCATGGTGGCACGGACCCTGGTGGGCTaGGGCGGCAGAAGGACCAGAACATCAACTGAGGTC +
Preference number: 3 (lower is better)
Translates to: LKRPMVARTLVG*GGRRTRTSTEV
Trigger: GACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp AAAGAGGGGTGTCTCTCCAGAAGCCAGTGCAGCTGCTaGTCAAGAGACCCATGGTGGCACGGACCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: KEGCLSRSQCSC*SRDPWWHGPWW
Trigger: CCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAGACACCCCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp GAGAAAGAGGGGTGTCTCTCCAGAAGCCAGTGCAGCTaGTGCTCAAGAGACCCATGGTGGCACGGACCCTGG +
Preference number: 3 (lower is better)
Translates to: EKEGCLSRSQCS*CSRDPWWHGPW
Trigger: CCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAGACACCCCTCTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp TGCTGCTCAAGAGACCCATGGTGGCACGGACCCTGGTaGGCTGAGGCGGCAGAAGGACCAGAACATCAACTG +
Preference number: 3 (lower is better)
Translates to: CCSRDPWWHGPW*AEAAEGPEHQL
Trigger: CAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp AGCTGCTGCTCAAGAGACCCATGGTGGCACGGACCCTaGTGGGCTGAGGCGGCAGAAGGACCAGAACATCAA +
Preference number: 3 (lower is better)
Translates to: SCCSRDPWWHGP*WAEAAEGPEHQ
Trigger: TTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGTGGAACTTGGTCTTTaGCCAAGACTCCCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRVELGL*PRLPLP
Trigger: GGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCAC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp GGCACAGGTACACACGCTTCTCAGGTCACCGCCTCATaGCACCATTGTCCTGGGGCTTGCATGGAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: GTGTHASQVTAS*HHCPGACMEGH
Trigger: ATGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTGAGAAGCGTGTGTACCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp GAAGTCCCTGACCCCTGGAGGCTCTGTTGTCTGGTCTaGTGCTACCTGGTTCTGGGGGCTCCATCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: EVPDPWRLCCLV*CYLVLGAPSAS
Trigger: AGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATaGTTCAAGTTCGCCTCTTCCTCTCCCCTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: PFGPRLGYNWVR*FKFASSSPLPP
Trigger: GGGAGGAAGGGGAGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp GGTGAGACCCAGGGCCAACTCCTCACTGGGCAGATGTaGTGGGAGAGAGGAGAGCAGTGGTCACTGAATCAG +
Preference number: 3 (lower is better)
Translates to: GETQGQLLTGQM*WERGEQWSLNQ
Trigger: CTGATTCAGTGACCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCCTGGGTCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp TCCCACCTTTACCCACCCTCAGGAAGCCTCCTAAGATaGCCAGCCACGTGCACCAACCCCCTTTCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: SHLYPPSGSLLR*PATCTNPLSEL
Trigger: GAGCTCAGAAAGGGGGTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCCTGAGGGTGGGTAAAGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CGCTTCTCAGGTCACCGCCTCATGACACCATTGTCCTaGGGCTTGCATGGAGGGCCATGGACACAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: RFSGHRLMTPLS*GLHGGPWTQRG
Trigger: TCCTCTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTGAGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCGCCTCATGACACCATaGTCCTGGGGCTTGCATGGA +
Preference number: 3 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSRLMTP*SWGLHG
Trigger: TCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGGCAGGAAATGCAATaGGAATGTGTCCCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQGQEMQ*ECVPQR
Trigger: TCTTTGGGGGACACATTCCAATTGCATTTCCTGCCC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCCCCTGGAGGCTCTGTaGTCTGGTCTGATGCTACCT +
Preference number: 3 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSPLEAL*SGLMLP
Trigger: AGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCTGACAGGGATAGAGTaGAGCAGACTGGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVLTGIE*SRLGLG
Trigger: CCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp CACTTCTGGCCGGCTGACATCAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTTAGAGGGACAGCCGGA +
Preference number: 3 (lower is better)
Translates to: HFWPADISGKVK*YLPHTFRGTAG
Trigger: TCCGGCTGTCCCTCTAAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACTGATGTCAGCCGGCCAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp CTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTaGTGGGGCCCAATGGGTGACACGAGGCCACATGTC +
Preference number: 3 (lower is better)
Translates to: LFVRRAAEGLAG*WGPMGDTRPHV
Trigger: GACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp ACCCCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTaGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTG +
Preference number: 3 (lower is better)
Translates to: TPGGSVVWSDAT*FWGLHLPLELV
Trigger: CACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CTTCTGAAGTCCCTGACCCCTGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTG +
Preference number: 3 (lower is better)
Translates to: LLKSLTPGGSVV*SDATWFWGLHL
Trigger: CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp GGTAGTGAGAATCTGTCTGTACAAGGAAAACAGGAATaGCCGGTGGCCCATCCCCACACCTGGCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: GSENLSVQGKQE*PVAHPHTWLGW
Trigger: CCAGCCCAGCCAGGTGTGGGGATGGGCCACCGGCCATTCCTGTTTTCCTTGTACAGACAGATTCTCACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACGCCTCATGACACCATaGTCCTGGGGCTTGCATGGA +
Preference number: 3 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSARLMTP*SWGLHG
Trigger: TCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGGCATCAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSRHQNH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCCT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp GATGGATCTAGTGCACCTGACTTCCAGCAGGGCGCCTaGCACAATCTTCTGCAATTGCCCTGGGAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: DGSSAPDFQQGA*HNLLQLPWEKG
Trigger: CCCCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAGGCGCCCTGCTGGAAGTCAGGTGCACTAGATCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp TTTCCATTTTCTGCTGTTGTGGGAAGAGGTGGAAGGTaGGAGTGGAGGGCAGGGTGGGGGTGGTGGTGTGGT +
Preference number: 3 (lower is better)
Translates to: FPFSAVVGRGGR*EWRAGWGWWCG
Trigger: ACCACACCACCACCCCCACCCTGCCCTCCACTCTCACCTTCCACCTCTTCCCACAACAGCAGAAAATGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp GTCGGGGGAACCAGCAAAGAGGCTCATTGGCAATGGTaGCTTCCAAGGGCCAAATGTTGGAGGGGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: VGGTSKEAHWQW*LPRAKCWRGLS
Trigger: GGAAAGACCCCTCCAACATTTGGCCCTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCTGGTTCCCCCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTaGGGCACAACGTCCCTGTTCTCAGCTCAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: LTWRSFTNHRGQ*GTTSLFSAQLC
Trigger: ACAGAGCTGAGCTGAGAACAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CCCTTTCTGAGCTCTTTCCAGGCTGTGCTGGCACCTTaGTCTGACTCTTGTGAGCAGTGTCTCTGTGTGGCC +
Preference number: 3 (lower is better)
Translates to: PFLSSFQAVLAP*SDSCEQCLCVA
Trigger: GGCCACACAGAGACACTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAGAGCTCAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGACCTAGTGAGCTCCTaGTCACTGGAGGTATGTGAG +
Preference number: 3 (lower is better)
Translates to: RVGPRDLATAGQGESLRSDLVSS*SLEVCE
Trigger: CTCACATACCTCCAGTGACAAGGAGCTCACTAGGTC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGGCATCAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: AFLLGDTPQGRPCILFICRHQNH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCCT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACACAATCTTCTGCAATaGCCCTGGGAGAAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAHNLLQ*PWEKGA
Trigger: TGCCCCCTTCTCCCAGGGCAATTGCAGAAGATTGTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCACAATCTTCTGCAATaGCCCTGGGAGAAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGHNLLQ*PWEKGA
Trigger: TGCCCCCTTCTCCCAGGGCAATTGCAGAAGATTGTG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGACCTCTCATTCTCTTTaGCTCTGGAGACCACACAGT +
Preference number: 3 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRTSHSL*LWRPHS
Trigger: ACTGTGTGGTCTCCAGAGCAAAAGAGAATGAGAGGT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp TCCTTTTCTCTTTCTGACAAGGCAGGACAGACCCGCTaGGCATCCCTGTCCCTTCTGGTGTCCCCATACAGC +
Preference number: 3 (lower is better)
Translates to: SFSLSDKAGQTR*ASLSLLVSPYS
Trigger: GCTGTATGGGGACACCAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp GGTGGGCTGAGGCGGCAGAAGGACCAGAACATCAACTaGGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GGLRRQKDQNIN*GPWRGSVCKKS
Trigger: GCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGACCTAGTGAGCTCCTaGTCACTGGAGGTATGTGAG +
Preference number: 3 (lower is better)
Translates to: RGCINGPMSNRERPARSTDLVSS*SLEVCE
Trigger: CTCACATACCTCCAGTGACAAGGAGCTCACTAGGTC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGTCCCTTCCAACTTATaGGGTCTGAGAGAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVVPSNL*GLREKG
Trigger: GCCCTTCTCTCTCAGACCCAATAAGTTGGAAGGGAC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCCTCTTTCCCTCTCTaGCCTCAGGGTTTCCAACTA +
Preference number: 3 (lower is better)
Translates to: AFLLGDTPQGRPCILFICASFPL*PQGFQL
Trigger: TAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGGGCAGGAAATGCAATaGGAATGTGTCCCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGGQEMQ*ECVPQR
Trigger: TCTTTGGGGGACACATTCCAATTGCATTTCCTGCCC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp CTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGATaGTGCATGTGCAAAAGGAGAAAGAGGGGTGTCTCT +
Preference number: 3 (lower is better)
Translates to: LNLPRMSLARFR*CMCKRRKRGVS
Trigger: AGAGACACCCCTCTTTCTCCTTTTGCACATGCACCATCTGAATCGTGCCAGGGACATCCTGGGCAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCAAATCATTGTCTTTaGGGCCAAATTAACAGAGGA +
Preference number: 3 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPNHCL*GQINRG
Trigger: TCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp CTGGGAGAGAGGAGAGCAGTGGTCACTGAATCAGGGTaGAGAGAAATTCCACAGGCTGGAATGAATCGAGTA +
Preference number: 3 (lower is better)
Translates to: LGERRAVVTESG*REIPQAGMNRV
Trigger: TACTCGATTCATTCCAGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCATTCATTATCCTTACTaGCTCAAAGGTTGGACCAGG +
Preference number: 3 (lower is better)
Translates to: AFLLGDTPQGRPCILFICIHYPY*LKGWTR
Trigger: CCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAAT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR TCA 72 bp ACCCCAACAGCTGGCAAGTTTACTAAGAACAAGTTGTaGCCCCCTGACCTGGAGGTCATTCACAAACCACAG +
Preference number: 3 (lower is better)
Translates to: TPTAGKFTKNKL*PPDLEVIHKPQ
Trigger: CTGTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACAACTTGTTCTTAGTAAACTTGCCAGCTGTTGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGACCTAGTGAGCTCCTaGTCACTGGAGGTATGTGAG +
Preference number: 3 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRDLVSS*SLEVCE
Trigger: CTCACATACCTCCAGTGACAAGGAGCTCACTAGGTC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACCAAATCATTGTCTTTaGGGCCAAATTAACAGAGGA +
Preference number: 3 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAPNHCL*GQINRG
Trigger: TCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR GCA 72 bp CAGGAAATGCAATTGGAATGTGTCCCCCAAAGAGGATaGATTAATGGGCCAATGTCAAACAGGGAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: QEMQLECVPQRG*INGPMSNRERP
Trigger: TGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCTTTGGGGGACACATTCCAATTGCATTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp AAAAGGGACATTCATTATCCTTACTTGCTCAAAGGTTaGACCAGGCAGACTTTAGGGTGGTGGCCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: KRDIHYPYLLKG*TRQTLGWWPRA
Trigger: AGCCCTAGGCCACCACCCTAAAGTCTGCCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAATGTCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CCA 72 bp GAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGTaGAAAAGGGACATTCATTATCCTTACTTGCTCAAA +
Preference number: 3 (lower is better)
Translates to: EDSRDPGRGPQR*KRDIHYPYLLK
Trigger: TTTGAGCAAGTAAGGATAATGAATGTCCCTTTTCCACCTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGTGCTGCTCCTGCTGCTaGTGGTGCCGCCGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLCCSCC*WCRRAS
Trigger: GCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCA...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGGCGGCGTGAGGCCCTaGTGGAAGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLGGVRP*WKGSLL
Trigger: CAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGCACGGGCAAGGGGTaGTCCTGGCTACTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQGTGKG*SWLLPA
Trigger: GGCGGGGAGTAGCCAGGACCACCCCTTGCCCGTGCC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTCCGAGCCCGCCTCCTaGCAGTGCCTCCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGSEPAS*QCLPSG
Trigger: GCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGA...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACCCGCGCTACTCCAGTaGCATGGTGCGCCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQPALLQ*HGAPAE
Trigger: CTCAGCGGGCGCACCATGGCACTGGAGTAGCGCGGG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTCCAGGCAGTGGGCCTaGCCCCAGAGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGSRQWA*PQRPPL
Trigger: CAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGA...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGTGGTCCGGGGTCGCTTaGGCCTCCGCGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGWSGVA*ASAGPS
Trigger: GGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCA...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGCGTGAGGCCCTGCTaGAAGGGGTCGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGVRPC*KGSLLP
Trigger: CGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACACCAGGGGACAGGGTaGGCTCACCAGTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQHQGTG*AHQSGP
Trigger: GGGGCCTGACTGGTGAGCCCACCCTGTCCCCTGGTG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGACCACGCGCACACTaGGGCCCGTCTCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGGPRAH*GPSQLP
Trigger: TGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCGGACCCTGGTGGGCTaGGGCGGCAGAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGRTLVG*GGRRTR
Trigger: TCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTCGCAGACGGCGGGATaGGGGCAGTCGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPSQTAG*GQSEPS
Trigger: GCTGGGCTCCGACTGCCCGCATCCCGCCGTCTGCGA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTGCTGCTCCTGCTGCTaGTGGTGCCGCCGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRCCSCC*WCRRAS
Trigger: GCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGCTGCTCCTGCTGCTaGTGGTGCCGCCGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPCCSCC*WCRRAS
Trigger: GCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACCCCTGCCCAGGCTGTaGCCATCTACCGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQPLPRL*PSTGLA
Trigger: AGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGCTGTCCCTTTGCGCCTaGCCAGGCTCAGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLLSLCA*PGSGSE
Trigger: CTCGGAGCCTGAGCCTGGGCAGGCGCAAAGGGACAG...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGCCTCCCTGCCCAGGCTaGCCCCATTTGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQPPCPG*PHLGPG
Trigger: GCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGGTCCGGGGTCGCTTaGGCCTCCGCGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPWSGVA*ASAGPS
Trigger: GGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAAGTAGAGCCGGTCGATaGGGTTCCCCACGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQSRAGR*GSPRGP
Trigger: AGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGGGCTGGGAGGCGAGTaGCCGTCCGAGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRGLGGE*PSESSG
Trigger: CCCAGAGCTCTCGGACGGCCACTCGCCTCCCAGCCC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCACCCAGTCCGGGGCTaGGCAGAGTGGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGHPVRG*AEWALV
Trigger: CACCAGTGCCCACTCTGCCCAGCCCCGGACTGGGTG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGTCCCTGCCATGTCTaGACTCTCTGGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQGPCHV*TLWLGR
Trigger: CCGGCCCAGCCAGAGAGTCCAGACATGGCAGGGACC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGTCCTGGCCCAGCCGCTaGGAGTTCTGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLSWPSR*EFCCSC
Trigger: GCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGA...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGGACCACGCGCACACTaGGGCCCGTCTCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPGPRAH*GPSQLP
Trigger: TGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCTCCAGACTCAGGCTaGGGGGTGTGCGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGAPDSG*GVCGSR
Trigger: CCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGCTGGGGCCCAATGGGTaGCACGAGGCCACATGTCAG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLLGPNG*HEATCQ
Trigger: CTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAG...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGCGGACCCTGGTGGGCTaGGGCGGCAGAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQRTLVG*GGRRTR
Trigger: TCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCG...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCTCTCCCGGACACTTaGAGCCACGCGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSALPDT*SHARRL
Trigger: GAGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGCTCTCCCGGACACTTaGAGCCACGCGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLALPDT*SHARRL
Trigger: GAGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTCGCAGACGGCGGGATaGGGGCAGTCGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLSQTAG*GQSEPS
Trigger: GCTGGGCTCCGACTGCCCGCATCCCGCCGTCTGCGA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATCCCGTCATCCCCGCTaGCCTTGCTCTGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQSRHPR*PCSDCP
Trigger: AGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGGCGGCGTGAGGCCCTaGTGGAAGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRGGVRP*WKGSLL
Trigger: CAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGTTCCCCACGCGGGCCTaGAGGGAGCCCACGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQFPTRA*REPTSE
Trigger: CTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAA...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTTCCCCACGCGGGCCTaGAGGGAGCCCACGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPFPTRA*REPTSE
Trigger: CTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTGCCCAAGCGTCCGTaGGCCTGGCTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLPKRP*AWLALR
Trigger: CCTGAGAGCCAGCCAGGCGCACGGACGCTTGGGCAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGCAGGACACAGCCCCTaGCCAGGCTGTGCCCATCTA +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLAGHSP*PGCAHL
Trigger: TAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCCTCCCTGCCCAGGCTaGCCCCATTTGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRPPCPG*PHLGPG
Trigger: GCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCCTCCCTGCCCAGGCTaGCCCCATTTGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLPPCPG*PHLGPG
Trigger: GCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGAAGGGCTAGCTGGCTaGTGGGGCCCAATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLEGLAG*WGPMGD
Trigger: GTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATGCCGTCCAACATCTTaGCGCAGTCCGTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQCRPTS*RSPSAR
Trigger: GCGGGCAGACGGACTGCGCCAAGATGTTGGACGGCA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGGAAGCGGTCGGAGATaGGCCGCTGGCAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSGSGRR*AAGSPR
Trigger: GCGAGGGCTGCCAGCGGCCCATCTCCGACCGCTTCC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTGGTCCGGGGTCGCTTaGGCCTCCGCGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRWSGVA*ASAGPS
Trigger: GGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGTGCCCTCCATGCGGCTaGACAGGACCTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLCPPCG*TGPPGP
Trigger: TGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCA...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTCGTTCCCTGGCATTTaGGGCGGCGTGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGSFPGI*GGVRPC
Trigger: GCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGA...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGCCGTCCGAGAGCTCTaGGTCCCTGGGGATGACAAG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLAVREL*VPGDDK
Trigger: CTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGCCGTCCGAGAGCTCTaGGTCCCTGGGGATGACAAG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQAVREL*VPGDDK
Trigger: CTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGGGCTGGGAGGCGAGTaGCCGTCCGAGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLGLGGE*PSESSG
Trigger: CCCAGAGCTCTCGGACGGCCACTCGCCTCCCAGCCC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGCGATGGAGGCCGAGGTaGGGCTGGGAGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGRWRPR*GWEASG
Trigger: GCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCG...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGTGCGGTTCCAGGCAGTaGGCCTGCCCCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQCGSRQ*ACPQRP
Trigger: TGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCA...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGCTGCTGGGGCCCAATaGGTGACACGAGGCCACATG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQAAGAQ*VTRGHM
Trigger: CATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGCTAGCTGGCTGCTaGGGCCCAATGGGTGACACG +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGGLAGC*GPMGDT
Trigger: CGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGTGGCACGGACCCTGGTaGGCTGAGGCGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGWHGPW*AEAAEG
Trigger: TCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCA...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGAAGGGCCAGGTCTCCTaGGGGATAGGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLKGQVS*GIGHLP
Trigger: GGGCAGATGCCCTATCCCCCAGGAGACCTGGCCCTT...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGAGTAGCAGCTGGTGGTaGGGGCTTGCTGACACGCCG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGSSSWW*GLADTP
Trigger: CGGCGTGTCAGCAAGCCCTCACCACCAGCTGCTACT...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTTCGCTGCTGCGTGGTaGGGATGGTCCGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRFAAAW*GWSGVA
Trigger: AGCGACCCCGGACCATCCTCACCACGCAGCAGCGAA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCCTCGAAGGAGGCCTTaGAGGCTCTTCGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGPRRRP*RLFAAA
Trigger: CGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGGACCACGCGCACACTaGGGCCCGTCTCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGGPRAH*GPSQLP
Trigger: TGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGCATTTGGGGCGGCGTaGGGCCCTGCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGAFGAA*GPAGRG
Trigger: ACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGCTCCAGACTCAGGCTaGGGGGTGTGCGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRAPDSG*GVCGSR
Trigger: CCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCGAGCCCGCCTCCTaGCAGTGCCTCCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASSEPAS*QCLPSG
Trigger: GCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGTCTGCTGGGTGGCCCTaGACACATCGCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLSAGWP*THRLPS
Trigger: AGAAGGGAGGCGATGTGTTCAGGGCCACCCAGCAGA...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPEFCCS*CCWCRR
Trigger: GCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGATGGCCACGATCTGCTaGTGTGGTGGGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQMATIC*CGGASG
Trigger: GCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCAT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGAAGGGGTCGCTGCTaGCGTAGGGGCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGRGRC*RRGSVP
Trigger: TGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCTGCCCAAGCGTCCGTaGGCCTGGCTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSLPKRP*AWLALR
Trigger: CCTGAGAGCCAGCCAGGCGCACGGACGCTTGGGCAG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCCCTGCCCAGGCTGTaGCCATCTACCGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPLPRL*PSTGLA
Trigger: AGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCATCCAGGCAGTGGGCCTaGCCCCAGAGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSSRQWA*PQRPPL
Trigger: CAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGA...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGAAGGGCTAGCTGGCTaGTGGGGCCCAATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGEGLAG*WGPMGD
Trigger: GTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGTCCCTGCCAGGCCCTaGTCATCTGATGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGVPARP*SSDAAP
Trigger: TGGCGCTGCATCAGATGAGCAGGGCCTGGCAGGGAC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCGGAGATGGGCCGCTaGCAGCCCTCGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASSEMGR*QPSQTA
Trigger: CGCCGTCTGCGAGGGCTGCCAGCGGCCCATCTCCGA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGACTGCCCTGCCCCTTaGCCGGCTTCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLDCPAP*PASCPH
Trigger: ATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGGCCCCGGCTCACCCTaGCCCAGCCGCTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGGPGSP*PSRWEF
Trigger: GAACTCCCAGCGGCTGGGCCAGGGTGAGCCGGGGCC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGCCCTCCATGCGGCTaGACAGGACCTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPCPPCG*TGPPGP
Trigger: TGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGATCTGCTGCTGTGGTaGGGCCAGCGGCGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGDLLLW*GQRRVG
Trigger: TCCTACACGCCGCTGGCCCCACCACAGCAGCAGATC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGTCCGTGCGCCTGGCTaGCTCTCAGGAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLVRAPG*LSGGEV
Trigger: TACTTCGCCTCCTGAGAGCCAGCCAGGCGCACGGAC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASVVRPS*PRGGHR
Trigger: ACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCAC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGCCCATCTACCGGTCTaGCTGTACCCAACGGGCACA +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLAHLPV*LYPTGT
Trigger: TGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGATGGGGAGGAGGCGATaGAGGCCGAGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGMGRRR*RPRWGW
Trigger: CCAGCCCCACCTCGGCCTCCATCGCCTCCTCCCCAT...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCACCCCTGCCCTTGCTaGGGCACAGGTACACACGCT +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLHPCPC*GTGTHA
Trigger: AGCGTGTGTACCTGTGCCCCAGCAAGGGCAGGGGTG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTGCGGTTCCAGGCAGTaGGCCTGCCCCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLCGSRQ*ACPQRP
Trigger: TGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGGCACGGACCCTGGTaGGCTGAGGCGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPWHGPW*AEAAEG
Trigger: TCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCATGGGGTCCCGGCTaGATTCGGGGGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGAWGPG*IRGFVR
Trigger: CCTCACAAACCCCCGAATCCAGCCGGGACCCCATGC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGACCAGCTCCTGGCATaGGGTCCCGGCTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQDQLLA*GPGWIR
Trigger: CCGAATCCAGCCGGGACCCCATGCCAGGAGCTGGTC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACATGTCTGGACTCTCTaGCTGGGCCGGAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQHVWTL*LGRRVW
Trigger: CCAGACTCTCCGGCCCAGCCAGAGAGTCCAGACATG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGGCAAGGGGTGGTCCTaGCTACTCCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSGKGWS*LLPAQL
Trigger: GAGCTGGGCGGGGAGTAGCCAGGACCACCCCTTGCC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGGCAAGGGGTGGTCCTaGCTACTCCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLGKGWS*LLPAQL
Trigger: GAGCTGGGCGGGGAGTAGCCAGGACCACCCCTTGCC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGGCACGGGCAAGGGGTaGTCCTGGCTACTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASGTGKG*SWLLPA
Trigger: GGCGGGGAGTAGCCAGGACCACCCCTTGCCCGTGCC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGCCCAGAGCTCAAGGATaGAGCCAGGCAGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLPRAQG*SQAGIR
Trigger: CCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGAACAGGAATGGCCGGTaGCCCATCCCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGNRNGR*PIPTPG
Trigger: GCCAGGTGTGGGGATGGGCCACCGGCCATTCCTGTT...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGTCCTGGCCCAGCCGCTaGGAGTTCTGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQSWPSR*EFCCSC
Trigger: GCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGA...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGAGTAGCAGCTGGTGGTaGGGGCTTGCTGACACGCCG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRSSSWW*GLADTP
Trigger: CGGCGTGTCAGCAAGCCCTCACCACCAGCTGCTACT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGTTCGCTGCTGCGTGGTaGGGATGGTCCGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGFAAAW*GWSGVA
Trigger: AGCGACCCCGGACCATCCTCACCACGCAGCAGCGAA...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGCATTTGGGGCGGCGTaGGGCCCTGCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSAFGAA*GPAGRG
Trigger: ACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTCCGAGCCCGCCTCCTaGCAGTGCCTCCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVSEPAS*QCLPSG
Trigger: GCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGCAGGACAGACCCGCTaGGCATCCCTGTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPAGQTR*ASLSLL
Trigger: CAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGCCCCTAGCCACGGCTaGCAGGGCGCCTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSAPSHG*QGASSI
Trigger: TATGCTGGAGGCGCCCTGTCAGCCGTGGCTAGGGGC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGCCCCTAGCCACGGCTaGCAGGGCGCCTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSAPSHG*QGASSI
Trigger: TATGCTGGAGGCGCCCTGTCAGCCGTGGCTAGGGGC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCACGGAGTAGGCAGATaGGGCTCTGGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRHGVGR*GSGWGH
Trigger: ATGGCCCCAGCCAGAGCCTCATCTGCCTACTCCGTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCAGGCCCTGCTCATCTaGTGCAGCGCCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSQALLI*CSARAF
Trigger: GAAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCCACATGTGCCTGTaGGTATGGGTCCGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGGHMCL*VWVRKP
Trigger: AGGCTTGCGGACCCATACTCACAGGCACATGTGGCC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGCCACATGTGCCTGTaGGTATGGGTCCGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGHMCL*VWVRKP
Trigger: AGGCTTGCGGACCCATACTCACAGGCACATGTGGCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCCCGCGCTACTCCAGTaGCATGGTGCGCCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSPALLQ*HGAPAE
Trigger: CTCAGCGGGCGCACCATGGCACTGGAGTAGCGCGGG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCTCCTCTGTCACCTaGTTGTCAGTCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGGSSVT*LSVPEP
Trigger: GGGTTCCGGGACTGACAAGCAGGTGACAGAGGAGCC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGCTCTCCCGGACACTTaGAGCCACGCGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAALPDT*SHARRL
Trigger: GAGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTCGCAGACGGCGGGATaGGGGCAGTCGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVSQTAG*GQSEPS
Trigger: GCTGGGCTCCGACTGCCCGCATCCCGCCGTCTGCGA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGTCTCGTAGTCACCCTTaGACAGCAGCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLSRSHP*TAAGPP
Trigger: AGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGA...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTGCCCTTGCTCTGACTaGCCTGCCCCTTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLCPCSD*PAPWPA
Trigger: AGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAGGGCA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTGCCCTTGCTCTGACTaGCCTGCCCCTTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLCPCSD*PAPWPA
Trigger: AGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAGGGCA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGTCCCGTCATCCCCGCTaGCCTTGCTCTGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQSRHPR*PCSDCP
Trigger: AGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGA...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCGCTGGGAGTTCTGCTaGTCCTGCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPRWEFC*SCCCWC
Trigger: GCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCCATCATGCCCTCCATaGGGCTGGACAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGPSCPP*GWTGPP
Trigger: AGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGCTGGAAGGGGTCGCTaGTGCCGTAGGGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRAGRGR*CRRGSV
Trigger: AACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGCTGGAAGGGGTCGCTaGTGCCGTAGGGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPAGRGR*CRRGSV
Trigger: AACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGCGGCGTGAGGCCCTaGTGGAAGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGGVRP*WKGSLL
Trigger: CAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCAGGCCCCTCTCCACTaGTGCTCCAGACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRQAPLH*CSRLRL
Trigger: CAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGCAGGCCCCTCTCCACTaGTGCTCCAGACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQQAPLH*CSRLRL
Trigger: CAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTG...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCTGTCCCTTTGCGCCTaGCCAGGCTCAGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRLSLCA*PGSGSE
Trigger: CTCGGAGCCTGAGCCTGGGCAGGCGCAAAGGGACAG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGGAGAGGACCACATTaGAGATGGGGTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGRGPH*RWGAQQ
Trigger: CTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGAGCCAGTGCAGCTGCTaGTCAAGAGACCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLSQCSC*SRDPWW
Trigger: CCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCT...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATCGGAGATGGGCCGCTaGCAGCCCTCGCAGACGGCG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTSEMGR*QPSQTA
Trigger: CGCCGTCTGCGAGGGCTGCCAGCGGCCCATCTCCGA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGGAAGCGGTCGGAGATaGGCCGCTGGCAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTGSGRR*AAGSPR
Trigger: GCGAGGGCTGCCAGCGGCCCATCTCCGACCGCTTCC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGACTGCCCTGCCCCTTaGCCGGCTTCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQDCPAP*PASCPH
Trigger: ATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGTGCCCTCCATGCGGCTaGACAGGACCTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGCPPCG*TGPPGP
Trigger: TGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCA...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGATCTGCTGCTGTGGTaGGGCCAGCGGCGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRDLLLW*GQRRVG
Trigger: TCCTACACGCCGCTGGCCCCACCACAGCAGCAGATC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCACGATCTGCTGCTGTaGTGGGGCCAGCGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRHDLLL*WGQRRV
Trigger: TACACGCCGCTGGCCCCACCACAGCAGCAGATCGTG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGAGGGGCTCTGTTCCATaGCCACGATCTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLRGSVP*PRSAAV
Trigger: CACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCT...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGGCGTGAGGCCCTGCTaGAAGGGGTCGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAGVRPC*KGSLLP
Trigger: CGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTCGTTCCCTGGCATTTaGGGCGGCGTGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRSFPGI*GGVRPC
Trigger: GCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGAGTAGAGCCGGTCGATaGGGTTCCCCACGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGSRAGR*GSPRGP
Trigger: AGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACT...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGGGGAGGGCACCGTATaGCTGTCTGTAGTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLGEGTV*LSVVCA
Trigger: CGCACAGACTACAGACAGCCATACGGTGCCCTCCCC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTVVRPS*PRGGHR
Trigger: ACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCAC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCCCATCTACCGGTCTaGCTGTACCCAACGGGCACA +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGAHLPV*LYPTGT
Trigger: TGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGATGACAAGGTCTCTGTaGGCAGGACACAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLMTRSL*AGHSPC
Trigger: GCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCAT...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCGATGGAGGCCGAGGTaGGGCTGGGAGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICRWRPR*GWEASG
Trigger: GCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACGATGGAGGCCGAGGTaGGGCTGGGAGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTRWRPR*GWEASG
Trigger: GCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGGGCCAACTCCTCACTaGGCAGATGTGCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGGPTPH*ADVLGE
Trigger: CTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTGCAGAAGGGCTAGCTaGCTGCTGGGGCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRCRRAS*LLGPNG
Trigger: CCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGTCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGSRDPW*HGPWWA
Trigger: AGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGA...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGCATGGGGTCCCGGCTaGATTCGGGGGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRAWGPG*IRGFVR
Trigger: CCTCACAAACCCCCGAATCCAGCCGGGACCCCATGC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCACCCAGTCCGGGGCTaGGCAGAGTGGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASHPVRG*AEWALV
Trigger: CACCAGTGCCCACTCTGCCCAGCCCCGGACTGGGTG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGAGGCAGATGAGGCTCTaGCTGGGGCCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQRQMRL*LGPCPA
Trigger: AGCTGGGCATGGCCCCAGCCAGAGCCTCATCTGCCT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCATGGGACCCCCAGGTaGGGTCGGGGGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLHGTPR*GRGNQQ
Trigger: TTGCTGGTTCCCCCGACCCCACCTGGGGGTCCCATG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGAACAGGAATGGCCGGTaGCCCATCCCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQNRNGR*PIPTPG
Trigger: GCCAGGTGTGGGGATGGGCCACCGGCCATTCCTGTT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGTGGTCACCTGGCATTTaGGGCGGCGTGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGWSPGI*GGVRPC
Trigger: GCAGGGCCTCACGCCGCCCCAAATGCCAGGTGACCA...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373474.9
3UTR CAA 72 bp CTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTaGTTCATCTGCGAGCCACACCCAGTCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGDTPQGRPCI*FICEPHPVRGW
Trigger: CCAGCCCCGGACTGGGTGTGGCTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 72 bp CTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTaGTCCCTGCCAGGCCCTGCTCATCTGATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LGGCRASQRRRG*SLPGPAHLMQR
Trigger: GCGCTGCATCAGATGAGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCCATGGTGCGCCCGCTaGGCCGCCGGGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVPWCAR*AAGFRA
Trigger: AGCTCTAAACCCGGCGGCTCAGCGGGCGCACCATGG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGTGGTGAGGGCTTGCTaGCACGCCGCGCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLVVRAC*HAAHCK
Trigger: TTTGCAGTGCGCGGCGTGTCAGCAAGCCCTCACCAC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAGTAGCAGCTGGTGGTaGGGGCTTGCTGACACGCCG +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSSSSWW*GLADTP
Trigger: CGGCGTGTCAGCAAGCCCTCACCACCAGCTGCTACT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGCAGCTGGCCCTCCTTaGGCACGAATTCGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRAAGPP*ARIRRP
Trigger: AGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTTTCGCTGCTGCGTGGTaGGGATGGTCCGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSFAAAW*GWSGVA
Trigger: AGCGACCCCGGACCATCCTCACCACGCAGCAGCGAA...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCCTCGAAGGAGGCCTTaGAGGCTCTTCGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRPRRRP*RLFAAA
Trigger: CGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCATTTGGGGCGGCGTaGGGCCCTGCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICAFGAA*GPAGRG
Trigger: ACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCTGGGTCCCTGGGGATaGCAAGGTCTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRLGPWG*QGLCGQ
Trigger: CTGCCCACAGAGACCTTGTCATCCCCAGGGACCCAG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGCTCCAGACTCAGGCTaGGGGGTGTGCGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASAPDSG*GVCGSR
Trigger: CCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCAGGACAGACCCGCTaGGCATCCCTGTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSAGQTR*ASLSLL
Trigger: CAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGGCATCAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQGIRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCTGGGGCCCAATGGGTaGCACGAGGCCACATGTCAG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLGPNG*HEATCQ
Trigger: CTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCCCGCGCTACTCCAGTaGCATGGTGCGCCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVPALLQ*HGAPAE
Trigger: CTCAGCGGGCGCACCATGGCACTGGAGTAGCGCGGG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGGCTCCTCTGTCACCTaGTTGTCAGTCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRGSSVT*LSVPEP
Trigger: GGGTTCCGGGACTGACAAGCAGGTGACAGAGGAGCC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCGACTCGGGACCTGTTaGTATATCCATGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLRLGTC*YIHGTR
Trigger: CCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACCGGGGCGCAGGGCGTaGTCCTCCATCTTGATGCCG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTPGRRA*SSILMP
Trigger: CGGCATCAAGATGGAGGAGCACGCCCTGCGCCCCGG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACCGGGGCGCAGGGCGTaGTCCTCCATCTTGATGCCG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAPGRRA*SSILMP
Trigger: CGGCATCAAGATGGAGGAGCACGCCCTGCGCCCCGG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGGGCGATCTTCTCCATaGAGCCGCTGCACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGGRSSP*SRCTWP
Trigger: CGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACGAATTCGTCGCCCTTaGGTAGCTGCCGTTCACACA +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQRIRRP*VAAVHT
Trigger: TGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTTCCCGTCATCCCCGCTaGCCTTGCTCTGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSSRHPR*PCSDCP
Trigger: AGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGA...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCAAGGCTCTTCGCTGCTaGGTGGTGAGGATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPKALRC*VVRMVR
Trigger: CCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGAGGCCCGTCTCAGCTaGCAGTGTCTCTCGGACCTT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLREARLS*QCLSDL
Trigger: AAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGAGGCCCGTCTCAGCTaGCAGTGTCTCTCGGACCTT +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPEARLS*QCLSDL
Trigger: AAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSEFCCS*CCWCRR
Trigger: GCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCGCTGGGAGTTCTGCTaGTCCTGCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLRWEFC*SCCCWC
Trigger: GCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTATGGCCACGATCTGCTaGTGTGGTGGGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSMATIC*CGGASG
Trigger: GCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCAT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATTCCCCACGCGGGCCTaGAGGGAGCCCACGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTFPTRA*REPTSE
Trigger: CTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCTGCCCAAGCGTCCGTaGGCCTGGCTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVLPKRP*AWLALR
Trigger: CCTGAGAGCCAGCCAGGCGCACGGACGCTTGGGCAG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGCTGTCTGTAGTCTGTaGGGAGAGCAGGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGAVCSL*GEQGGG
Trigger: ACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCATGTGTCTGCACGTaGCTCTCTGTCCCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGACVCT*LSVPLR
Trigger: GCGCAAAGGGACAGAGAGGCACGTGCAGACACATGC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGGGAGAGGACCACATTaGAGATGGGGTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQGRGPH*RWGAQQ
Trigger: CTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGGACAGCCGGAGGCCTaGTGGGGGACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPGQPEA*WGTVLR
Trigger: TCTTAACACTGTCCCCCAGCAGGCCTCCGGCTGTCC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGAAGGGCTAGCTGGCTaGTGGGGCCCAATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQREGLAG*WGPMGD
Trigger: GTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATGCATCTTGTTCATCTaGGAGCCACACCCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQCILFI*EPHPVR
Trigger: CCGGACTGGGTGTGGCTCGCAGATGAACAAGATGCA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAAAAGTGGGAGAAGGTTaGCCAGCCCCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQKVGEG*PAPQAS
Trigger: AGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACTTT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGAGATGCCCAGCCACGTaGACCAACCCCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGRCPAT*TNPLSE
Trigger: CTCAGAAAGGGGGTTGGTGCACGTGGCTGGGCATCT...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGTCCCTGCCAGGCCCTaGTCATCTGATGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGVPARP*SSDAAP
Trigger: TGGCGCTGCATCAGATGAGCAGGGCCTGGCAGGGAC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTTGCCGTCCAACATCTTaGCGCAGTCCGTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSCRPTS*RSPSAR
Trigger: GCGGGCAGACGGACTGCGCCAAGATGTTGGACGGCA...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGCAGCCGCTGCACTTaGCCGCGAAGAGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPCSRCT*PRRAVG
Trigger: ACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGACTGCCCTGCCCCTTaGCCGGCTTCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRDCPAP*PASCPH
Trigger: ATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCCCTGGCCCAGCCGCTaGGAGTTCTGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVPWPSR*EFCCSC
Trigger: GCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCACGATCTGCTGCTGTaGTGGGGCCAGCGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSHDLLL*WGQRRV
Trigger: TACACGCCGCTGGCCCCACCACAGCAGCAGATCGTG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGATGGAGTCGTTCCCTaGCATTTGGGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRDGVVP*HLGRRE
Trigger: CTCACGCCGCCCCAAATGCCAGGGAACGACTCCATC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGTCCGTGCGCCTGGCTaGCTCTCAGGAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGVRAPG*LSGGEV
Trigger: TACTTCGCCTCCTGAGAGCCAGCCAGGCGCACGGAC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGATGACAAGGTCTCTGTaGGCAGGACACAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGMTRSL*AGHSPC
Trigger: GCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCAT...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGCCGTCCGAGAGCTCTaGGTCCCTGGGGATGACAAG +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLAVREL*VPGDDK
Trigger: CTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAGGCCGAGGTGGGGCTaGGAGGCGAGTGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKRPRWG*EASGRP
Trigger: CGGACGGCCACTCGCCTCCCAGCCCCACCTCGGCCT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTGCGGTTCCAGGCAGTaGGCCTGCCCCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICCGSRQ*ACPQRP
Trigger: TGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGACTGGGCAGATGTGCTaGGAGAGAGGAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLTGQMC*ERGEQW
Trigger: CCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGT...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGCTGCTGGGGCCCAATaGGTGACACGAGGCCACATG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRAAGAQ*VTRGHM
Trigger: CATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGGGCTAGCTGGCTGCTaGGGCCCAATGGGTGACACG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSGLAGC*GPMGDT
Trigger: CGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTGCAGAAGGGCTAGCTaGCTGCTGGGGCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLCRRAS*LLGPNG
Trigger: CCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTGCAGAAGGGCTAGCTaGCTGCTGGGGCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRCRRAS*LLGPNG
Trigger: CCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCATGGTGGCACGGACCCTaGTGGGCTGAGGCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSWWHGP*WAEAAE
Trigger: TTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCA...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGTGCCCAGGATGTCCCTaGCACGATTCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLCPGCP*HDSDGA
Trigger: TGCACCATCTGAATCGTGCCAGGGACATCCTGGGCA...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAAGGGCCAGGTCTCCTaGGGGATAGGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSKGQVS*GIGHLP
Trigger: GGGCAGATGCCCTATCCCCCAGGAGACCTGGCCCTT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAAGGGCCAGGTCTCCTaGGGGATAGGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRKGQVS*GIGHLP
Trigger: GGGCAGATGCCCTATCCCCCAGGAGACCTGGCCCTT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGACCAGCTCCTGGCATaGGGTCCCGGCTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSDQLLA*GPGWIR
Trigger: CCGAATCCAGCCGGGACCCCATGCCAGGAGCTGGTC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACACCCAGTCCGGGGCTaGGCAGAGTGGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAHPVRG*AEWALV
Trigger: CACCAGTGCCCACTCTGCCCAGCCCCGGACTGGGTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCATGTCTGGACTCTCTaGCTGGGCCGGAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRHVWTL*LGRRVW
Trigger: CCAGACTCTCCGGCCCAGCCAGAGAGTCCAGACATG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGCAAGGGGTGGTCCTaGCTACTCCCCGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGKGWS*LLPAQL
Trigger: GAGCTGGGCGGGGAGTAGCCAGGACCACCCCTTGCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACCAAGGGCCAAATGTTaGAGGGGTCTTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQPRAKC*RGLSCS
Trigger: GGAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCATGGGACCCCCAGGTaGGGTCGGGGGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSHGTPR*GRGNQQ
Trigger: TTGCTGGTTCCCCCGACCCCACCTGGGGGTCCCATG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCGTGCTCCTCCATCTTaGTGCCGTCCAACATCTTGG +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGRAPPS*CRPTSW
Trigger: CCAAGATGTTGGACGGCATCAAGATGGAGGAGCACG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCGGGGCTCACGGAGCTaGGCAGGTCCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSRGSRS*AGPSPS
Trigger: AGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACCTCGAAGGAGGCCTTaGAGGCTCTTCGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSPRRRP*RLFAAA
Trigger: CGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCTGGGTCCCTGGGGATaGCAAGGTCTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASLGPWG*QGLCGQ
Trigger: CTGCCCACAGAGACCTTGTCATCCCCAGGGACCCAG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGCAGGACAGACCCGCTaGGCATCCCTGTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSAGQTR*ASLSLL
Trigger: CAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCTCTGTTGTCTGGTCTaGTGCTACCTGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLLCCLV*CYLVLG
Trigger: CCCCAGAACCAGGTAGCATCAGACCAGACAACAGAG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATACAGCAGGGCAGGGTaGATCTCTAAGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQYSRAG*ISKVMW
Trigger: CCACATGACCTTAGAGATTCACCCTGCCCTGCTGTA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTCTGCTGGGTGGCCCTaGACACATCGCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSAGWP*THRLPS
Trigger: AGAAGGGAGGCGATGTGTTCAGGGCCACCCAGCAGA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCCTCTTTCTGAGCCTTaGCTTCCCCAGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGPLSEP*LPQQGS
Trigger: ACTTCCCTGCTGGGGAAGTCAAGGCTCAGAAAGAGG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCACCAACCCCCTTTCTaGGCTCTTTCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPHQPPF*ALSRLC
Trigger: GCACAGCCTGGAAAGAGCTCAGAAAGGGGGTTGGTG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACAGGCCCTGCTCATCTaGTGCAGCGCCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAQALLI*CSARAF
Trigger: GAAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGGCAATCCTCCTTCCTaGGGTTCCCTGCGTGCAACA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPGNPPS*GSLRAT
Trigger: TGTTGCACGCAGGGAACCTCAGGAAGGAGGATTGCC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTTGGCGCAGTCCGTCTaGCCGCGAGGGAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLAQSV*PRGKHL
Trigger: GAGGTGCTTCCCTCGCGGGCAGACGGACTGCGCCAA...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATTGGCGCAGTCCGTCTaGCCGCGAGGGAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTLAQSV*PRGKHL
Trigger: GAGGTGCTTCCCTCGCGGGCAGACGGACTGCGCCAA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTCTCCATGCAGCCGCTaGACTTGGCCGCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSPCSR*TWPRRA
Trigger: AGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGTCGCCCTTGCGTAGCTaGCGTTCACACACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGSPLRS*RSHTQQ
Trigger: CTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGA...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTCGCCCTTGCGTAGCTaGCGTTCACACACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSPLRS*RSHTQQ
Trigger: CTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCGAATTCGTCGCCCTTaGGTAGCTGCCGTTCACACA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGRIRRP*VAAVHT
Trigger: TGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTGCCCTTGCTCTGACTaGCCTGCCCCTTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICCPCSD*PAPWPA
Trigger: AGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAGGGCA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCATCATGCCCTCCATaGGGCTGGACAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLPSCPP*GWTGPP
Trigger: AGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCATGGCCACGATCTGCTaGTGTGGTGGGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICMATIC*CGGASG
Trigger: GCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCAT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGGAAGGGGTCGCTGCTaGCGTAGGGGCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASGRGRC*RRGSVP
Trigger: TGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCCCCTGCCCAGGCTGTaGCCATCTACCGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGPLPRL*PSTGLA
Trigger: AGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGTCCAGGCAGTGGGCCTaGCCCCAGAGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKSRQWA*PQRPPL
Trigger: CAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGA...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGCCTCTCTGTCCCTTTaGGCCTGCCCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVASLSL*ACPGSG
Trigger: GCCTGAGCCTGGGCAGGCGCAAAGGGACAGAGAGGC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGAGCCTGGCTCTGGGATaGAGGACAGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGSLALG*RTAQLL
Trigger: CAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCT...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGGACAGCCGGAGGCCTaGTGGGGGACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRGQPEA*WGTVLR
Trigger: TCTTAACACTGTCCCCCAGCAGGCCTCCGGCTGTCC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTCACTGGGCAGATGTaGTGGGAGAGAGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLTGQM*WERGEQ
Trigger: CTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGAAGGGGGCAGGAAATaGAATTGGAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQEGGRK*NWNVSP
Trigger: GGGGGACACATTCCAATTGCATTTCCTGCCCCCTTC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGAGAAGCCAGTGCAGCTaGTGCTCAAGAGACCCATGG +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGRSQCS*CSRDPW
Trigger: CCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCT...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCCTCAAGGCAGGCCCTaGATCTTGTTCATCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLPQGRP*ILFICE
Trigger: CTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAGCCCCACAGGCTTCTaGTGGGTGGCCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSSPTGF*WVALNT
Trigger: TGTGTTCAGGGCCACCCAGCAGAAGCCTGTGGGGCT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCTCTGGCTGGGGCCATaGCCAGCTTTTTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLWLGP*PAFCPS
Trigger: GGAGGGACAAAAAGCTGGGCATGGCCCCAGCCAGAG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCTCTGGCTGGGGCCATaGCCAGCTTTTTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRLWLGP*PAFCPS
Trigger: GGAGGGACAAAAAGCTGGGCATGGCCCCAGCCAGAG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGTGTGTGGCCTCCCTGTaGGTTTCCCAGGATAGCAGA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGCVASL*VSQDSR
Trigger: TCTGCTATCCTGGGAAACGCACAGGGAGGCCACACA...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGGAAGCCTCCTAAGATaGCCAGCCACGTGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQGSLLR*PATCTN
Trigger: GTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCTGTTGCTATATCCATaGGACGCGGGGCGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASLLLYP*DAGRAA
Trigger: CGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGAAGCGGTCGGAGATaGGCCGCTGGCAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGSGRR*AAGSPR
Trigger: GCGAGGGCTGCCAGCGGCCCATCTCCGACCGCTTCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTGCAGCCGCTGCACTTaGCCGCGAAGAGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLCSRCT*PRRAVG
Trigger: ACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGCATCACGAACTCGGTaGGGGCGATCTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRASRTR*GRSSPC
Trigger: GCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGATCTGCTGCTGTGGTaGGGCCAGCGGCGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASDLLLW*GQRRVG
Trigger: TCCTACACGCCGCTGGCCCCACCACAGCAGCAGATC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGCGTGAGGCCCTGCTaGAAGGGGTCGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGVRPC*KGSLLP
Trigger: CGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGATGGAGTCGTTCCCTaGCATTTGGGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLDGVVP*HLGRRE
Trigger: CTCACGCCGCCCCAAATGCCAGGGAACGACTCCATC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGTGGTCAGGCCCAGCTaGCCGAGGGGAGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKVVRPS*PRGGHR
Trigger: ACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCAC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGTCCTGGGGCTTGCATaGAGGGCCATGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRVLGLA*RAMDTE
Trigger: CTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGAC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGTCCTGGGGCTTGCATaGAGGGCCATGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSVLGLA*RAMDTE
Trigger: CTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGAC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCATCCCTGTCCCTTCTaGTGTCCCCATACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGHPCPF*CPHTAV
Trigger: CACAGCTGTATGGGGACACCAGAAGGGACAGGGATG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGATCGCTCTTAAGAACTaGGGGGTCCCCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLIALKN*GVPCLA
Trigger: GGCCAGGCAGGGGACCCCCCAGTTCTTAAGAGCGAT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCATTTGGGCCCAGGCTaGGATACAACTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGHLGPG*DTTGSD
Trigger: ATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGACAGTAAGTGCAGACTaGGTGCGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRTVSAD*VRWLTP
Trigger: AGGCGTGAGCCACCGCACCCAGTCTGCACTTACTGT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGAGAGAGGAGAGCAGTaGTCACTGAATCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLERGEQ*SLNQGA
Trigger: TGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGGGCCAACTCCTCACTaGGCAGATGTGCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRGPTPH*ADVLGE
Trigger: CTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGCTGCTGGGGCCCAATaGGTGACACGAGGCCACATG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSAAGAQ*VTRGHM
Trigger: CATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGGCTAGCTGGCTGCTaGGGCCCAATGGGTGACACG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGLAGC*GPMGDT
Trigger: CGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTGGCACGGACCCTGGTaGGCTGAGGCGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICWHGPW*AEAAEG
Trigger: TCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATGGTGGCACGGACCCTaGTGGGCTGAGGCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAWWHGP*WAEAAE
Trigger: TTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTGCTCAAGAGACCCATaGTGGCACGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRCSRDP*WHGPWW
Trigger: CCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATGTGACCCCCTGACCTaGAGGTCATTCACAAACCAC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQCDPLT*RSFTNH
Trigger: GTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGTGTGACCCCCTGACCTaGAGGTCATTCACAAACCAC +
Preference number: 4 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLCDPLT*RSFTNH
Trigger: GTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACA...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCCAGAGCTCAAGGATaGAGCCAGGCAGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLPRAQG*SQAGIR
Trigger: CCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCCCAGAGCTCAAGGATaGAGCCAGGCAGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRPRAQG*SQAGIR
Trigger: CCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCATGGGACCCCCAGGTaGGGTCGGGGGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICHGTPR*GRGNQQ
Trigger: TTGCTGGTTCCCCCGACCCCACCTGGGGGTCCCATG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCTGGACAGGACCTCCTaGCCCAGCCGCTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICLDRTS*PSRWEF
Trigger: GAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCTGGACAGGACCTCCTaGCCCAGCCGCTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLDRTS*PSRWEF
Trigger: GAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
3UTR CAA 72 bp CAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTaGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QQPSLLALTGIE*SRLGLGMDLVH
Trigger: GTGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCCATGGTGCGCCCGCTaGGCCGCCGGGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKPWCAR*AAGFRA
Trigger: AGCTCTAAACCCGGCGGCTCAGCGGGCGCACCATGG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCGTGCTCCTCCATCTTaGTGCCGTCCAACATCTTGG +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPRAPPS*CRPTSW
Trigger: CCAAGATGTTGGACGGCATCAAGATGGAGGAGCACG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGTGGTGAGGGCTTGCTaGCACGCCGCGCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICVVRAC*HAAHCK
Trigger: TTTGCAGTGCGCGGCGTGTCAGCAAGCCCTCACCAC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTGGTGAGGGCTTGCTaGCACGCCGCGCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVVRAC*HAAHCK
Trigger: TTTGCAGTGCGCGGCGTGTCAGCAAGCCCTCACCAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCAGCTGGCCCTCCTTaGGCACGAATTCGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAAGPP*ARIRRP
Trigger: AGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGCAGCTGGCCCTCCTTaGGCACGAATTCGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAAAGPP*ARIRRP
Trigger: AGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGTACAGCAGGGCAGGGTaGATCTCTAAGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLYSRAG*ISKVMW
Trigger: CCACATGACCTTAGAGATTCACCCTGCCCTGCTGTA...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGAACAAGGGGACACAGTaGTCACCAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLNKGTQ*SPGDRV
Trigger: CACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTT...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGACCAGAACATCAACTaGGGTCCTTGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLDQNIN*GPWRGS
Trigger: AGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCTCTTTCTGAGCCTTaGCTTCCCCAGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPLSEP*LPQQGS
Trigger: ACTTCCCTGCTGGGGAAGTCAAGGCTCAGAAAGAGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACACGGAGTAGGCAGATaGGGCTCTGGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAHGVGR*GSGWGH
Trigger: ATGGCCCCAGCCAGAGCCTCATCTGCCTACTCCGTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGCACCAACCCCCTTTCTaGGCTCTTTCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGHQPPF*ALSRLC
Trigger: GCACAGCCTGGAAAGAGCTCAGAAAGGGGGTTGGTG...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGGCAATCCTCCTTCCTaGGGTTCCCTGCGTGCAACA +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLGNPPS*GSLRAT
Trigger: TGTTGCACGCAGGGAACCTCAGGAAGGAGGATTGCC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCGACTCGGGACCTGTTaGTATATCCATGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSRLGTC*YIHGTR
Trigger: CCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCGACTCGGGACCTGTTaGTATATCCATGGGACGCGG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRRLGTC*YIHGTR
Trigger: CCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCCGGGGCGCAGGGCGTaGTCCTCCATCTTGATGCCG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKPGRRA*SSILMP
Trigger: CGGCATCAAGATGGAGGAGCACGCCCTGCGCCCCGG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGGGCGATCTTCTCCATaGAGCCGCTGCACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGGRSSP*SRCTWP
Trigger: CGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCGCCCTTGCGTAGCTaGCGTTCACACACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASSPLRS*RSHTQQ
Trigger: CTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAAGGCTCTTCGCTGCTaGGTGGTGAGGATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSKALRC*VVRMVR
Trigger: CCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCGCTGGGAGTTCTGCTaGTCCTGCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGRWEFC*SCCCWC
Trigger: GCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCAGCCGCTGGGAGTTCTaGTGCTCCTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVSRWEF*CSCCCW
Trigger: CCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAAGCCGCTGGGAGTTCTaGTGCTCCTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTSRWEF*CSCCCW
Trigger: CCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCT...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGCTGGAAGGGGTCGCTaGTGCCGTAGGGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTAGRGR*CRRGSV
Trigger: AACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCTGTCTGTAGTCTGTaGGGAGAGCAGGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAVCSL*GEQGGG
Trigger: ACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGCAGGACACAGCCCCTaGCCAGGCTGTGCCCATCTA +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVAGHSP*PGCAHL
Trigger: TAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACAGGCCCCTCTCCACTaGTGCTCCAGACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAQAPLH*CSRLRL
Trigger: CAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGCATGTGTCTGCACGTaGCTCTCTGTCCCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGACVCT*LSVPLR
Trigger: GCGCAAAGGGACAGAGAGGCACGTGCAGACACATGC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAAGCCTGGCTCTGGGATaGAGGACAGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSSLALG*RTAQLL
Trigger: CAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCT...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGGCTTAGCTGTCACTTaGGTGTGGGGCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRGLAVT*VWGPGI
Trigger: AATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGGCTTAGCTGTCACTTaGGTGTGGGGCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGGLAVT*VWGPGI
Trigger: AATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAAGTCTAAACAGTAAGTaGAGACTGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQSLNSK*RLGAVA
Trigger: AGCCACCGCACCCAGTCTGCACTTACTGTTTAGACT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGCTCACTGGGCAGATGTaGTGGGAGAGAGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGLTGQM*WERGEQ
Trigger: CTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAG...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGCAGCCCAGCCTCCTTaGTCTGACAGGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPAAQPP*SDRDRV
Trigger: AACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGCAGCCCAGCCTCCTTaGTCTGACAGGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQAAQPP*SDRDRV
Trigger: AACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTCTCCAGAAGCCAGTaGAGCTGCTGCTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLSRSQ*SCCSRD
Trigger: GTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCAAAGTGGGAGAAGGTTaGCCAGCCCCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPKVGEG*PAPQAS
Trigger: AGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACTTT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTGGAACTTGGTCTTTTaGCAAGACTCCCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGWNLVF*QDSPCP
Trigger: TGGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCA...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGTTTTTGTCCCTCCTCTaGCCTGTGTTACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGFLSLL*PVLPGA
Trigger: TGCCCCAGGTAACACAGGGCAGAGGAGGGACAAAAA...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGTGTGGCCTCCCTGTaGGTTTCCCAGGATAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPCVASL*VSQDSR
Trigger: TCTGCTATCCTGGGAAACGCACAGGGAGGCCACACA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAGATGCCCAGCCACGTaGACCAACCCCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRRCPAT*TNPLSE
Trigger: CTCAGAAAGGGGGTTGGTGCACGTGGCTGGGCATCT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGGAAGCCTCCTAAGATaGCCAGCCACGTGCACCAAC +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLGSLLR*PATCTN
Trigger: GTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCTGTTGCTATATCCATaGGACGCGGGGCGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLLLYP*DAGRAA
Trigger: CGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCTGTTGCTATATCCATaGGACGCGGGGCGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICLLLYP*DAGRAA
Trigger: CGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGCATCACGAACTCGGTaGGGGCGATCTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRASRTR*GRSSPC
Trigger: GCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGCATCACGAACTCGGTaGGGGCGATCTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGASRTR*GRSSPC
Trigger: GCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACACGATCTGCTGCTGTaGTGGGGCCAGCGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAHDLLL*WGQRRV
Trigger: TACACGCCGCTGGCCCCACCACAGCAGCAGATCGTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTCCGTGCGCCTGGCTaGCTCTCAGGAGGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVRAPG*LSGGEV
Trigger: TACTTCGCCTCCTGAGAGCCAGCCAGGCGCACGGAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCACCCCTGCCCTTGCTaGGGCACAGGTACACACGCT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICHPCPC*GTGTHA
Trigger: AGCGTGTGTACCTGTGCCCCAGCAAGGGCAGGGGTG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCACCCCTGCCCTTGCTaGGGCACAGGTACACACGCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVHPCPC*GTGTHA
Trigger: AGCGTGTGTACCTGTGCCCCAGCAAGGGCAGGGGTG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCATCCCTGTCCCTTCTaGTGTCCCCATACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPHPCPF*CPHTAV
Trigger: CACAGCTGTATGGGGACACCAGAAGGGACAGGGATG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCATTTGGGCCCAGGCTaGGATACAACTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPHLGPG*DTTGSD
Trigger: ATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCAGGCTGCCCCCATTTaGGCCCAGGCTGGGATACAA +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASQAAPI*AQAGIQ
Trigger: TTGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCAGGCTGCCCCCATTTaGGCCCAGGCTGGGATACAA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSQAAPI*AQAGIQ
Trigger: TTGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGATGCTACCTGGTTCTaGGGGCTCCATCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQDATWF*GLHLPL
Trigger: TAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGAAGTCCCTGACCCCTaGAGGCTCTGTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLEVPDP*RLCCLV
Trigger: GACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGGAGGCAGAGGTGGCTaGGGAGAGGACCACATTGCA +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASGGRGG*GEDHIA
Trigger: TGCAATGTGGTCCTCTCCCCAGCCACCTCTGCCTCC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGACAGTAAGTGCAGACTaGGTGCGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLTVSAD*VRWLTP
Trigger: AGGCGTGAGCCACCGCACCCAGTCTGCACTTACTGT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGACTGGGCAGATGTGCTaGGAGAGAGGAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLTGQMC*ERGEQW
Trigger: CCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGT...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGACTGGGCAGATGTGCTaGGAGAGAGGAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRTGQMC*ERGEQW
Trigger: CCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCACCAGGGGACAGGGTaGGCTCACCAGTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKHQGTG*AHQSGP
Trigger: GGGGCCTGACTGGTGAGCCCACCCTGTCCCCTGGTG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAACCACAGGGGACAGTaGGGCACAACGTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSNHRGQ*GTTSLF
Trigger: GAACAGGGACGTTGTGCCCCACTGTCCCCTGTGGTT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAACCACAGGGGACAGTaGGGCACAACGTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRNHRGQ*GTTSLF
Trigger: GAACAGGGACGTTGTGCCCCACTGTCCCCTGTGGTT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAACCACAGGGGACAGTaGGGCACAACGTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLNHRGQ*GTTSLF
Trigger: GAACAGGGACGTTGTGCCCCACTGTCCCCTGTGGTT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCATGGGGTCCCGGCTaGATTCGGGGGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAWGPG*IRGFVR
Trigger: CCTCACAAACCCCCGAATCCAGCCGGGACCCCATGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTCTGGACTCTCTGGCTaGGCCGGAGAGTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRSGLSG*AGESGF
Trigger: AAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCTCCTCCCATAAAGTaGGAGAAGGTTGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSAPPIK*EKVAQP
Trigger: GGGCTGGGCAACCTTCTCCCACTTTATGGGAGGAGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACAGGGAAGTGGAACTTaGTCTTTTGCCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQQGSGT*SFAKTP
Trigger: GGGAGTCTTGGCAAAAGACCAAGTTCCACTTCCCTG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATCCCCAGCAGGGAAGTaGAACTTGGTCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQSPAGK*NLVFCQ
Trigger: TTGGCAAAAGACCAAGTTCCACTTCCCTGCTGGGGA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCAGGCAGATGAGGCTCTaGCTGGGGCCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGRQMRL*LGPCPA
Trigger: AGCTGGGCATGGCCCCAGCCAGAGCCTCATCTGCCT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAGCAGTGTCTCTGTGTaGCCTCCCTGTGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRSSVSV*PPCAFP
Trigger: GGGAAACGCACAGGGAGGCCACACAGAGACACTGCT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCTTTCCAGGCTGTGCTaGCACCTTGGTCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLLSRLC*HLGLTL
Trigger: AAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCTTTCCAGGCTGTGCTaGCACCTTGGTCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGLSRLC*HLGLTL
Trigger: AAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCTCCCTCACCCTAGGTaGTGCCCAGAGCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRLPHPR*CPELKD
Trigger: ATCCTTGAGCTCTGGGCACCACCTAGGGTGAGGGAG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCTCCCTCACCCTAGGTaGTGCCCAGAGCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLPHPR*CPELKD
Trigger: ATCCTTGAGCTCTGGGCACCACCTAGGGTGAGGGAG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGAGGCTCATTGGCAATaGTGCCTTCCAAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGEAHWQ*CLPRAK
Trigger: TTTGGCCCTTGGAAGGCACCATTGCCAATGAGCCTC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAAACAGGAATGGCCGGTaGCCCATCCCCACACCTGGC +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTNRNGR*PIPTPG
Trigger: GCCAGGTGTGGGGATGGGCCACCGGCCATTCCTGTT...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGCCAGGACGACTCGTTaGCTCGCATCAGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAARTTR*LASGSG
Trigger: ACCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGCCAGGACGACTCGTTaGCTCGCATCAGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTARTTR*LASGSG
Trigger: ACCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCAGGTCACCGCCTCATaGCACCATTGTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGQVTAS*HHCPGA
Trigger: AGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCAGGTCACCGCCTCATaGCACCATTGTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVQVTAS*HHCPGA
Trigger: AGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCTCTGTTGTCTGGTCTaGTGCTACCTGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSLCCLV*CYLVLG
Trigger: CCCCAGAACCAGGTAGCATCAGACCAGACAACAGAG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAAGGGGCAGATGAGATaGCCGCTTCTGACGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLKGQMR*PLLTSL
Trigger: AAGGGACGTCAGAAGCGGTCATCTCATCTGCCCCTT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCCAAGTTGTGACCCCCTaGCCTGGAGGTCATTCACAA +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPQVVTP*PGGHSQ
Trigger: TTGTGAATGACCTCCAGGTCAGGGGGTCACAACTTG...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGGCCACATGTGCCTGTaGGTATGGGTCCGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGGHMCL*VWVRKP
Trigger: AGGCTTGCGGACCCATACTCACAGGCACATGTGGCC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGTTGGCGCAGTCCGTCTaGCCGCGAGGGAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKLAQSV*PRGKHL
Trigger: GAGGTGCTTCCCTCGCGGGCAGACGGACTGCGCCAA...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATCTCCATGCAGCCGCTaGACTTGGCCGCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASPCSR*TWPRRA
Trigger: AGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTTCTCGTAGTCACCCTTaGACAGCAGCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSRSHP*TAAGPP
Trigger: AGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGA...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTTGAAGGCTCTTCGCTaGTGCGTGGTGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRLKALR*CVVRMV
Trigger: GACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCCATCATGCCCTCCATaGGGCTGGACAGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVPSCPP*GWTGPP
Trigger: AGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGAAGTGTGCATGTGTCTaGACGTGCCTCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRKCACV*TCLSVP
Trigger: AGGGACAGAGAGGCACGTGCAGACACATGCACACTT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGACATTGCAGATGGGGTaGCCAGCAGGTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRTLQMG*PAGASE
Trigger: TTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGGGAGAGGACCACATTaGAGATGGGGTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTGRGPH*RWGAQQ
Trigger: CTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGCCTGGCTCTGGGATaGAGGACAGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSLALG*RTAQLL
Trigger: CAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCTCACTGGGCAGATGTaGTGGGAGAGAGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSLTGQM*WERGEQ
Trigger: CTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGCAGCCCAGCCTCCTTaGTCTGACAGGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRAAQPP*SDRDRV
Trigger: AACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGCCCCACAGGCTTCTaGTGGGTGGCCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSPTGF*WVALNT
Trigger: TGTGTTCAGGGCCACCCAGCAGAAGCCTGTGGGGCT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAAGCCCCACAGGCTTCTaGTGGGTGGCCCTGAACACA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASPTGF*WVALNT
Trigger: TGTGTTCAGGGCCACCCAGCAGAAGCCTGTGGGGCT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTGGAACTTGGTCTTTTaGCAAGACTCCCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRWNLVF*QDSPCP
Trigger: TGGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCTCTGGCTGGGGCCATaGCCAGCTTTTTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGLWLGP*PAFCPS
Trigger: GGAGGGACAAAAAGCTGGGCATGGCCCCAGCCAGAG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCTCATTGGCAATGGTaGCTTCCAAGGGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGAHWQW*LPRAKC
Trigger: ACATTTGGCCCTTGGAAGGCACCATTGCCAATGAGC...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCCCTTGCACAGCAGCTaGCCCTCCTTGAGCACGAAT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSPLHSS*PSLSTN
Trigger: ATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGGGAGGGCACCGTATaGCTGTCTGTAGTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGEGTV*LSVVCA
Trigger: CGCACAGACTACAGACAGCCATACGGTGCCCTCCCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGATGACACCATTGTCCTaGGGCTTGCATGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRMTPLS*GLHGGP
Trigger: TGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCAT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCATCGCTCTTAAGAACTaGGGGGTCCCCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVIALKN*GVPCLA
Trigger: GGCCAGGCAGGGGACCCCCCAGTTCTTAAGAGCGAT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACAGGCTGCCCCCATTTaGGCCCAGGCTGGGATACAA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAQAAPI*AQAGIQ
Trigger: TTGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTGGTCTGATGCTACCTaGTTCTGGGGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLWSDAT*FWGLHL
Trigger: CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGAAGTCCCTGACCCCTaGAGGCTCTGTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSEVPDP*RLCCLV
Trigger: GACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGAGGCAGAGGTGGCTaGGGAGAGGACCACATTGCA +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGGRGG*GEDHIA
Trigger: TGCAATGTGGTCCTCTCCCCAGCCACCTCTGCCTCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGTTAAGAGGGAGAGCTaGGGAAGCCTGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSVKRES*GSLALG
Trigger: TCCCAGAGCCAGGCTTCCCCAGCTCTCCCTCTTAAC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGGCCAACTCCTCACTaGGCAGATGTGCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGPTPH*ADVLGE
Trigger: CTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASRDPW*HGPWWA
Trigger: AGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATGCTCAAGAGACCCATaGTGGCACGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTCSRDP*WHGPWW
Trigger: CCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATGCTCAAGAGACCCATaGTGGCACGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSACSRDP*WHGPWW
Trigger: CCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGTGCCCAGGATGTCCCTaGCACGATTCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRCPGCP*HDSDGA
Trigger: TGCACCATCTGAATCGTGCCAGGGACATCCTGGGCA...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTTCTGGACTCTCTGGCTaGGCCGGAGAGTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSGLSG*AGESGF
Trigger: AAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCATGTCTGGACTCTCTaGCTGGGCCGGAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICHVWTL*LGRRVW
Trigger: CCAGACTCTCCGGCCCAGCCAGAGAGTCCAGACATG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGTCCCTGCCATGTCTaGACTCTCTGGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGPCHV*TLWLGR
Trigger: CCGGCCCAGCCAGAGAGTCCAGACATGGCAGGGACC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCAGGGAAGTGGAACTTaGTCTTTTGCCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLQGSGT*SFAKTP
Trigger: GGGAGTCTTGGCAAAAGACCAAGTTCCACTTCCCTG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGTCCCCAGCAGGGAAGTaGAACTTGGTCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGSPAGK*NLVFCQ
Trigger: TTGGCAAAAGACCAAGTTCCACTTCCCTGCTGGGGA...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGCAGTGTCTCTGTGTaGCCTCCCTGTGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSSVSV*PPCAFP
Trigger: GGGAAACGCACAGGGAGGCCACACAGAGACACTGCT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGCTGTGCTGGCACCTTaGTCTGACTCTTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLAVLAP*SDSCEQ
Trigger: CTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTCAGATGGGGGCAGAGTaGGGAATCAGCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSQMGAE*GISLLL
Trigger: TAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTG...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCCAAGGGCCAAATGTTaGAGGGGTCTTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLPRAKC*RGLSCS
Trigger: GGAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGAGCAAAGAGGCTCATTaGCAATGGTGCCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGSKEAH*QWCLPR
Trigger: CCTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCT...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGAGCAAAGAGGCTCATTaGCAATGGTGCCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLSKEAH*QWCLPR
Trigger: CCTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCT...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGTTCATGTGGTCACCTaGCATTTGGGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASVHVVT*HLGRRE
Trigger: CTCACGCCGCCCCAAATGCCAGGTGACCACATGAAC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373474.9
CDS-3UTR CCA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCGATGTCATGGAAGATaGAGTCGTTCCCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGRCHGR*SRSHRG
Trigger: ACCCCTATGGGAACGACTCCATCTTCCATGACATCG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373474.9
3UTR CAA 72 bp TACACACGCTTCTCAGGTCACCGCCTCATGACACCATaGTCCTGGGGCTTGCATGGAGGGCCATGGACACAG +
Preference number: 4 (lower is better)
Translates to: YTRFSGHRLMTP*SWGLHGGPWTQ
Trigger: CTGTGTCCATGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTGAGAAGCGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCGGGGCTCACGGAGCTaGGCAGGTCCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKRGSRS*AGPSPS
Trigger: AGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSGKVK*YLPHTF
Trigger: AAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACT...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGGCATCAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASGIRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCCAACTTATTGGGTCTaGGAGAGAAGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRPTYWV*ERRARS
Trigger: AGACCTGGCCCTTCTCTCTCAGACCCAATAAGTTGG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAAAGGGGCAGATGAGATaGCCGCTTCTGACGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSKGQMR*PLLTSL
Trigger: AAGGGACGTCAGAAGCGGTCATCTCATCTGCCCCTT...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTAAGGGGCAGATGAGATaGCCGCTTCTGACGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASKGQMR*PLLTSL
Trigger: AAGGGACGTCAGAAGCGGTCATCTCATCTGCCCCTT...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCAAGTTGTGACCCCCTaGCCTGGAGGTCATTCACAA +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLQVVTP*PGGHSQ
Trigger: TTGTGAATGACCTCCAGGTCAGGGGGTCACAACTTG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCATCGCCTCCCTTCTCTaGGCCTCAGGCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVIASLL*ASGSSS
Trigger: AGATGAGGAGCCTGAGGCTCAGAGAAGGGAGGCGAT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCACGGAGTAGGCAGATaGGGCTCTGGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKHGVGR*GSGWGH
Trigger: ATGGCCCCAGCCAGAGCCTCATCTGCCTACTCCGTG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACACCAACCCCCTTTCTaGGCTCTTTCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTHQPPF*ALSRLC
Trigger: GCACAGCCTGGAAAGAGCTCAGAAAGGGGGTTGGTG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGGCGATCTTCTCCATaGAGCCGCTGCACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGRSSP*SRCTWP
Trigger: CGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTCTCGTAGTCACCCTTaGACAGCAGCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVSRSHP*TAAGPP
Trigger: AGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTTGAAGGCTCTTCGCTaGTGCGTGGTGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASLKALR*CVVRMV
Trigger: GACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAGCCGCTGGGAGTTCTaGTGCTCCTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKSRWEF*CSCCCW
Trigger: CCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGCTGTCTGTAGTCTGTaGGGAGAGCAGGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKAVCSL*GEQGGG
Trigger: ACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAAGTGTGCATGTGTCTaGACGTGCCTCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRKCACV*TCLSVP
Trigger: AGGGACAGAGAGGCACGTGCAGACACATGCACACTT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAAGTGTGCATGTGTCTaGACGTGCCTCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSKCACV*TCLSVP
Trigger: AGGGACAGAGAGGCACGTGCAGACACATGCACACTT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTACAACTGGGTCCGATaGTTCAAGTTCGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPYNWVR*FKFASS
Trigger: GGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGTACAACTGGGTCCGATaGTTCAAGTTCGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRYNWVR*FKFASS
Trigger: GGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTA...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGACATTGCAGATGGGGTaGCCAGCAGGTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLTLQMG*PAGASE
Trigger: TTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGT...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTACATTGCAGATGGGGTaGCCAGCAGGTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSTLQMG*PAGASE
Trigger: TTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCTGACACAATCTTCTaGAATTGCCCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPDTIF*NCPGRR
Trigger: CCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGCCTGACACAATCTTCTaGAATTGCCCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GDRASAPESAQDVPGTIQPDTIF*NCPGRR
Trigger: CCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAGG...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCAGCCAGTGCAGCTGCTaGTCAAGAGACCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVSQCSC*SRDPWW
Trigger: CCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGCACGATTCAGATGGTaGATGTGCAAAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQARFRW*MCKRRK
Trigger: CTTTCTCCTTTTGCACATGCACCATCTGAATCGTGC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTGCCAAGACTCCCCCTaGCCACCTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLCQDSP*PPLILF
Trigger: AAAGAGAATGAGAGGTGGGCAGGGGGAGTCTTGGCA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGAAGCCTCCTAAGATaGCCAGCCACGTGCACCAAC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGSLLR*PATCTN
Trigger: GTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCTCTTGCTAGGAGGCTaGAGGGCTTCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASLLLGG*RASQRR
Trigger: TCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGAGGTTCCCTGCGTaGAACATGAAAAGGACATTC +
Preference number: 4 (lower is better)
Translates to: PQQPSLLALTGIELSRLGLRFPA*NMKRTF
Trigger: GAATGTCCTTTTCATGTTGCACGCAGGGAACCTCAG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACCCTTGCACAGCAGCTaGCCCTCCTTGAGCACGAAT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAPLHSS*PSLSTN
Trigger: ATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGGGGCTCTGTTCCATaGCCACGATCTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICRGSVP*PRSAAV
Trigger: CACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGAGTAGGAACTCTGCATaGAGTAGAGCCGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGSRNSA*SRAGRW
Trigger: CCATCGACCGGCTCTACTCCATGCAGAGTTCCTACT...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGATGCTACCTGGTTCTaGGGGCTCCATCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSDATWF*GLHLPL
Trigger: TAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCATGGTCTGATGCTACCTaGTTCTGGGGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSWSDAT*FWGLHL
Trigger: CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGGGSVV*SDATWF
Trigger: GAACCAGGTAGCATCAGACCAGACAACAGAGCCTCC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTTAAGAGGGAGAGCTaGGGAAGCCTGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVKRES*GSLALG
Trigger: TCCCAGAGCCAGGCTTCCCCAGCTCTCCCTCTTAAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCACAGTAAGTGCAGACTaGGTGCGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVTVSAD*VRWLTP
Trigger: AGGCGTGAGCCACCGCACCCAGTCTGCACTTACTGT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCTTCTGCAATTGCCCTaGGAGAAGGGGGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLLQLP*EKGAGN
Trigger: ATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCTGGCACGATTCAGATaGTGCATGTGCAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLLARFR*CMCKRR
Trigger: TCTCCTTTTGCACATGCACCATCTGAATCGTGCCAG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCATGCCCAGGATGTCCCTaGCACGATTCAGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSCPGCP*HDSDGA
Trigger: TGCACCATCTGAATCGTGCCAGGGACATCCTGGGCA...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTCTGGACTCTCTGGCTaGGCCGGAGAGTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSGLSG*AGESGF
Trigger: AAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCTCCTCCCATAAAGTaGGAGAAGGTTGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICAPPIK*EKVAQP
Trigger: GGGCTGGGCAACCTTCTCCCACTTTATGGGAGGAGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGCTCCTCCCATAAAGTaGGAGAAGGTTGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAAPPIK*EKVAQP
Trigger: GGGCTGGGCAACCTTCTCCCACTTTATGGGAGGAGC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAGGCAGATGAGGCTCTaGCTGGGGCCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKRQMRL*LGPCPA
Trigger: AGCTGGGCATGGCCCCAGCCAGAGCCTCATCTGCCT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAAGCAGTGTCTCTGTGTaGCCTCCCTGTGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSASSVSV*PPCAFP
Trigger: GGGAAACGCACAGGGAGGCCACACAGAGACACTGCT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGCTGTGCTGGCACCTTaGTCTGACTCTTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSAVLAP*SDSCEQ
Trigger: CTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCAAGGAAAACAGGAATaGCCGGTGGCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGQGKQE*PVAHPH
Trigger: GTGGGGATGGGCCACCGGCCATTCCTGTTTTCCTTG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCAAGGAAAACAGGAATaGCCGGTGGCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVQGKQE*PVAHPH
Trigger: GTGGGGATGGGCCACCGGCCATTCCTGTTTTCCTTG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 72 bp CCTGTTCTCAGCTCAGCTCTGTCACTAACCCGGACCTaGGACAGGCCTCTTTCCCTCTCTTGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PVLSSALSLTRT*DRPLSLSCLRV
Trigger: AACCCTGAGGCAAGAGAGGGAAAGAGGCCTGTCCAAGGTCCGGGTTAGTGACAGAGCTGAGCTGAGAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACCATGGTGCGCCCGCTaGGCCGCCGGGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRPWCAR*AAGFRA
Trigger: AGCTCTAAACCCGGCGGCTCAGCGGGCGCACCATGG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGAGAGCAGTGGTCACTaGATCAGGGTGCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGESSGH*IRVQRN
Trigger: ATTTCTCTGCACCCTGATTCAGTGACCACTGCTCTC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGAGAGCAGTGGTCACTaGATCAGGGTGCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSESSGH*IRVQRN
Trigger: ATTTCTCTGCACCCTGATTCAGTGACCACTGCTCTC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACCAACTTATTGGGTCTaGGAGAGAAGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSPTYWV*ERRARS
Trigger: AGACCTGGCCCTTCTCTCTCAGACCCAATAAGTTGG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCCAACTTATTGGGTCTaGGAGAGAAGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASPTYWV*ERRARS
Trigger: AGACCTGGCCCTTCTCTCTCAGACCCAATAAGTTGG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCCCCTAGCCACGGCTaGCAGGGCGCCTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRAPSHG*QGASSI
Trigger: TATGCTGGAGGCGCCCTGTCAGCCGTGGCTAGGGGC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCCTCTTTCTGAGCCTTaGCTTCCCCAGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICPLSEP*LPQQGS
Trigger: ACTTCCCTGCTGGGGAAGTCAAGGCTCAGAAAGAGG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACGAATTCGTCGCCCTTaGGTAGCTGCCGTTCACACA +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTRIRRP*VAAVHT
Trigger: TGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTTGAAGGCTCTTCGCTaGTGCGTGGTGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVLKALR*CVVRMV
Trigger: GACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGAGGCCCGTCTCAGCTaGCAGTGTCTCTCGGACCTT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKEARLS*QCLSDL
Trigger: AAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGACAGCCGGAGGCCTaGTGGGGGACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGQPEA*WGTVLR
Trigger: TCTTAACACTGTCCCCCAGCAGGCCTCCGGCTGTCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTTAACAGAGGAAGGGTaGCACAGCAGGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLLTEEG*HSRRGD
Trigger: ATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGTTAACAGAGGAAGGGTaGCACAGCAGGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLTEEG*HSRRGD
Trigger: ATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAA...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAAAACAAAACAGTAGGTaGCCCCATCCTGCATATACA +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQKQNSR*PHPAYT
Trigger: TGTATATGCAGGATGGGGGCACCTACTGTTTTGTTT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAGTCTAAACAGTAAGTaGAGACTGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRSLNSK*RLGAVA
Trigger: AGCCACCGCACCCAGTCTGCACTTACTGTTTAGACT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGAAGGGGGCAGGAAATaGAATTGGAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASEGGRK*NWNVSP
Trigger: GGGGGACACATTCCAATTGCATTTCCTGCCCCCTTC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAAGAAGCCAGTGCAGCTaGTGCTCAAGAGACCCATGG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSARSQCS*CSRDPW
Trigger: CCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCAGAAGCCAGTGCAGCTaGTGCTCAAGAGACCCATGG +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGRSQCS*CSRDPW
Trigger: CCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCTCTTTCCCTCTCTTaGCTCAGGGTTTCCAACTAT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPLSLS*LRVSNY
Trigger: ATAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCCTCAAGGCAGGCCCTaGATCTTGTTCATCTGCGAG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICPQGRP*ILFICE
Trigger: CTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACCTCAAGGCAGGCCCTaGATCTTGTTCATCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTPQGRP*ILFICE
Trigger: CTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAAAGTGGGAGAAGGTTaGCCAGCCCCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICKVGEG*PAPQAS
Trigger: AGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACTTT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTTGCCAAGACTCCCCCTaGCCACCTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSCQDSP*PPLILF
Trigger: AAAGAGAATGAGAGGTGGGCAGGGGGAGTCTTGGCA...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTGCCAAGACTCCCCCTaGCCACCTCTCATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASCQDSP*PPLILF
Trigger: AAAGAGAATGAGAGGTGGGCAGGGGGAGTCTTGGCA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTTTTTGTCCCTCCTCTaGCCTGTGTTACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASFLSLL*PVLPGA
Trigger: TGCCCCAGGTAACACAGGGCAGAGGAGGGACAAAAA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATGTGTGGCCTCCCTGTaGGTTTCCCAGGATAGCAGA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSACVASL*VSQDSR
Trigger: TCTGCTATCCTGGGAAACGCACAGGGAGGCCACACA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCTCTTGCTAGGAGGCTaGAGGGCTTCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVLLLGG*RASQRR
Trigger: TCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCTGAGGTTCCCTGCGTaGAACATGAAAAGGACATTC +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRLRFPA*NMKRTF
Trigger: GAATGTCCTTTTCATGTTGCACGCAGGGAACCTCAG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGTTGTTTCCATTTTCTaGTGTTGTGGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLVVSIF*CCGKRW
Trigger: CCACCTCTTCCCACAACAGCAGAAAATGGAAACAAC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGTGCAGCCGCTGCACTTaGCCGCGAAGAGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKCSRCT*PRRAVG
Trigger: ACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCA...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTAGGAACTCTGCATaGAGTAGAGCCGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSRNSA*SRAGRW
Trigger: CCATCGACCGGCTCTACTCCATGCAGAGTTCCTACT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAATGGGGAGGAGGCGATaGAGGCCGAGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRMGRRR*RPRWGW
Trigger: CCAGCCCCACCTCGGCCTCCATCGCCTCCTCCCCAT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCATGACACCATTGTCCTaGGGCTTGCATGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGMTPLS*GLHGGP
Trigger: TGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCAT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAGGCTGGGATACAACTaGGTCCGATGCTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRRLGYN*VRCFKF
Trigger: GAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCATTTGGGCCCAGGCTaGGATACAACTGGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICHLGPG*DTTGSD
Trigger: ATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTGGTCTGATGCTACCTaGTTCTGGGGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICWSDAT*FWGLHL
Trigger: CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGGAGGCTCTGTTGTCTaGTCTGATGCTACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSGGSVV*SDATWF
Trigger: GAACCAGGTAGCATCAGACCAGACAACAGAGCCTCC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATCGAGTAAGAAGGAATaGAAAAGGAAAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQSSKKE*KRKEVT
Trigger: CGTGACCTCTTTCCTTTTCCATTCCTTCTTACTCGA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGAGAGAGGAGAGCAGTaGTCACTGAATCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSERGEQ*SLNQGA
Trigger: TGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCTTCTGCAATTGCCCTaGGAGAAGGGGGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASLLQLP*EKGAGN
Trigger: ATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACACCAGGGGACAGGGTaGGCTCACCAGTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRHQGTG*AHQSGP
Trigger: GGGGCCTGACTGGTGAGCCCACCCTGTCCCCTGGTG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGTCAAGAGACCCATGGTaGCACGGACCCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKSRDPW*HGPWWA
Trigger: AGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGA...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTGTGACCCCCTGACCTaGAGGTCATTCACAAACCAC +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASCDPLT*RSFTNH
Trigger: GTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCTGCCCTGTGTTACCTaGGGCAATTATTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLLPCVT*GNYFLF
Trigger: AAAGAGGAAATAATTGCCCCAGGTAACACAGGGCAG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGCTGTGCTGGCACCTTaGTCTGACTCTTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGAVLAP*SDSCEQ
Trigger: CTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACTTTCCAGGCTGTGCTaGCACCTTGGTCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: RVGPRDLATAGQGESLRSLSRLC*HLGLTL
Trigger: AAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACAGATGGGGGCAGAGTaGGGAATCAGCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTQMGAE*GISLLL
Trigger: TAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAAATGTGTCTGGGGATaGCGGGTGGGTAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSKCVWG*RVGSEN
Trigger: ATTCTCACTACCCACCCGCCATCCCCAGACACATTT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCTCCTTTTCTCTTTCTaGCAAGGCAGGACAGACCCG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICLLFSF*QGRTDP
Trigger: CGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACTCCTTTTCTCTTTCTaGCAAGGCAGGACAGACCCG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTLLFSF*QGRTDP
Trigger: CGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSGKVK*YLPHTF
Trigger: AAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACT...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATACAGCAGGGCAGGGTaGATCTCTAAGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTYSRAG*ISKVMW
Trigger: CCACATGACCTTAGAGATTCACCCTGCCCTGCTGTA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAACAAGGGGACACAGTaGTCACCAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKNKGTQ*SPGDRV
Trigger: CACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGATCGCCTCCCTTCTCTaGGCCTCAGGCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKIASLL*ASGSSS
Trigger: AGATGAGGAGCCTGAGGCTCAGAGAAGGGAGGCGAT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGCAATCCTCCTTCCTaGGGTTCCCTGCGTGCAACA +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGNPPS*GSLRAT
Trigger: TGTTGCACGCAGGGAACCTCAGGAAGGAGGATTGCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCATGCAAACACTCCTCGTaGCAGGACGACTCGTTGACT +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSACKHSS*QDDSLT
Trigger: AGTCAACGAGTCGTCCTGGCACGAGGAGTGTTTGCA...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRREFCCS*CCWCRR
Trigger: GCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCCTCTCTGTCCCTTTaGGCCTGCCCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRASLSL*ACPGSG
Trigger: GCCTGAGCCTGGGCAGGCGCAAAGGGACAGAGAGGC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGGCTTAGCTGTCACTTaGGTGTGGGGCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKGLAVT*VWGPGI
Trigger: AATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTAGTCTAAACAGTAAGTaGAGACTGGGTGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASSLNSK*RLGAVA
Trigger: AGCCACCGCACCCAGTCTGCACTTACTGTTTAGACT...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGTCACTGAATCAGGGTaGAGAGAAATTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLVTESG*REIPQA
Trigger: AGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGAC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTTTCCCTCTCTTaGCTCAGGGTTTCCAACTAT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLPLSLS*LRVSNY
Trigger: ATAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCTGAGGTTCCCTGCGTaGAACATGAAAAGGACATTC +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLRFPA*NMKRTF
Trigger: GAATGTCCTTTTCATGTTGCACGCAGGGAACCTCAG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGCTCATTGGCAATGGTaGCTTCCAAGGGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASAHWQW*LPRAKC
Trigger: ACATTTGGCCCTTGGAAGGCACCATTGCCAATGAGC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGGTTGTTTCCATTTTCTaGTGTTGTGGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRVVSIF*CCGKRW
Trigger: CCACCTCTTCCCACAACAGCAGAAAATGGAAACAAC...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCCCTTGCACAGCAGCTaGCCCTCCTTGAGCACGAAT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKPLHSS*PSLSTN
Trigger: ATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAGGGGCTCTGTTCCATaGCCACGATCTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKRGSVP*PRSAAV
Trigger: CACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGCGATGTCATGGAAGATaGAGTCGTTCCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGRCHGR*SRSLAF
Trigger: AAATGCCAGGGAACGACTCCATCTTCCATGACATCG...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAAGTAGGAACTCTGCATaGAGTAGAGCCGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTSRNSA*SRAGRW
Trigger: CCATCGACCGGCTCTACTCCATGCAGAGTTCCTACT...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGAAGTCCCTGACCCCTaGAGGCTCTGTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKEVPDP*RLCCLV
Trigger: GACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGAGAGAGGAGAGCAGTaGTCACTGAATCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGERGEQ*SLNQGA
Trigger: TGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGGCAGGAAATGCAATTaGAATGTGTCCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLGRKCN*NVSPKE
Trigger: CTCTTTGGGGGACACATTCCAATTGCATTTCCTGCC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGGGCAGGAAATGCAATTaGAATGTGTCCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGGRKCN*NVSPKE
Trigger: CTCTTTGGGGGACACATTCCAATTGCATTTCCTGCC...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGAGAGGGCCCCAAAGGTaGAAAAGGGACATTCATTAT +
Preference number: 4 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRRGPQR*KRDIHY
Trigger: ATAATGAATGTCCCTTTTCCACCTTTGGGGCCCTCT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATGGTGGCACGGACCCTaGTGGGCTGAGGCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRWWHGP*WAEAAE
Trigger: TTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCTGGCACGATTCAGATaGTGCATGTGCAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLLARFR*CMCKRR
Trigger: TCTCCTTTTGCACATGCACCATCTGAATCGTGCCAG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGGTCCCTGCCATGTCTaGACTCTCTGGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRGPCHV*TLWLGR
Trigger: CCGGCCCAGCCAGAGAGTCCAGACATGGCAGGGACC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGCATTCTCTTTTGCTCTaGAGACCACACAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLHSLLL*RPHSYL
Trigger: GAGATAACTGTGTGGTCTCCAGAGCAAAAGAGAATG...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGAGGCTCATTGGCAATaGTGCCTTCCAAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTEAHWQ*CLPRAK
Trigger: TTTGGCCCTTGGAAGGCACCATTGCCAATGAGCCTC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTTCGCTGTCGATGTCATaGAAGATGGAGTCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSSLSMS*KMESFP
Trigger: TGGGAACGACTCCATCTTCCATGACATCGACAGCGA...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373474.9
3UTR CAA 72 bp CTTGACTTCCCCAGCAGGGAAGTGGAACTTGGTCTTTaGCCAAGACTCCCCCTGCCCACCTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LDFPSREVELGL*PRLPLPTSHSL
Trigger: AAGAGAATGAGAGGTGGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCACTTCCCTGCTGGGGAAGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACGGGGCTCACGGAGCTaGGCAGGTCCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRRGSRS*AGPSPS
Trigger: AGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCTCTGTTGTCTGGTCTaGTGCTACCTGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKLCCLV*CYLVLG
Trigger: CCCCAGAACCAGGTAGCATCAGACCAGACAACAGAG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGAGAGCAGTGGTCACTaGATCAGGGTGCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICESSGH*IRVQRN
Trigger: ATTTCTCTGCACCCTGATTCAGTGACCACTGCTCTC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTACAACTGGGTCCGATaGTTCAAGTTCGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICYNWVR*FKFASS
Trigger: GGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTTAACAGAGGAAGGGTaGCACAGCAGGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICLTEEG*HSRRGD
Trigger: ATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACCTGACACAATCTTCTaGAATTGCCCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTPDTIF*NCPGRR
Trigger: CCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAGG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCTCTTGCTAGGAGGCTaGAGGGCTTCCCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKLLLGG*RASQRR
Trigger: TCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTCGCTGTCGATGTCATaGAAGATGGAGTCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGSLSMS*KMESFP
Trigger: AGGGAACGACTCCATCTTCCATGACATCGACAGCGA...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATCGCTGTCGATGTCATaGAAGATGGAGTCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTSLSMS*KMESFP
Trigger: AGGGAACGACTCCATCTTCCATGACATCGACAGCGA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAAGGCTGGGATACAACTaGGTCCGATGCTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSARLGYN*VRCFKF
Trigger: GAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGATGCTACCTGGTTCTaGGGGCTCCATCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKDATWF*GLHLPL
Trigger: TAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAATCTCTAAGGTCATGTaGCCAAATCATTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQISKVM*PNHCLL
Trigger: CAAAAGACAATGATTTGGCCACATGACCTTAGAGAT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGAGAGGGCCCCAAAGGTaGAAAAGGGACATTCATTAT +
Preference number: 4 (lower is better)
Translates to: WSDATWFWGLHLPLELVGRGPQR*KRDIHY
Trigger: ATAATGAATGTCCCTTTTCCACCTTTGGGGCCCTCT...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACATCCCCAGCAGGGAAGTaGAACTTGGTCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTSPAGK*NLVFCQ
Trigger: TTGGCAAAAGACCAAGTTCCACTTCCCTGCTGGGGA...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCTGCCCTGTGTTACCTaGGGCAATTATTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLLPCVT*GNYFLF
Trigger: AAAGAGGAAATAATTGCCCCAGGTAACACAGGGCAG...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAAGCAAAGAGGCTCATTaGCAATGGTGCCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTSKEAH*QWCLPR
Trigger: CCTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCT...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCAAATGTGTCTGGGGATaGCGGGTGGGTAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVKCVWG*RVGSEN
Trigger: ATTCTCACTACCCACCCGCCATCCCCAGACACATTT...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGAGTGGGAAGGTGAAGTaGTACCTGCCCCACACCTTT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKSGKVK*YLPHTF
Trigger: AAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACT...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATCTCCATGCAGCCGCTaGACTTGGCCGCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRSPCSR*TWPRRA
Trigger: AGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAAGGCTCTTCGCTGCTaGGTGGTGAGGATGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRKALRC*VVRMVR
Trigger: CCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTCACTGAATCAGGGTaGAGAGAAATTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVTESG*REIPQA
Trigger: AGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGTCACTGAATCAGGGTaGAGAGAAATTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTVTESG*REIPQA
Trigger: AGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGAC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGCACGATTCAGATGGTaGATGTGCAAAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSARFRW*MCKRRK
Trigger: CTTTCTCCTTTTGCACATGCACCATCTGAATCGTGC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTGCACGATTCAGATGGTaGATGTGCAAAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASARFRW*MCKRRK
Trigger: CTTTCTCCTTTTGCACATGCACCATCTGAATCGTGC...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCCTCTTTCCCTCTCTTaGCTCAGGGTTTCCAACTAT +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVPLSLS*LRVSNY
Trigger: ATAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCTTCTGCAATTGCCCTaGGAGAAGGGGGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKLLQLP*EKGAGN
Trigger: ATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCTGGCACGATTCAGATaGTGCATGTGCAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICLARFR*CMCKRR
Trigger: TCTCCTTTTGCACATGCACCATCTGAATCGTGCCAG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAACAAGGGGACACAGTaGTCACCAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRNKGTQ*SPGDRV
Trigger: CACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGTTGGTAGTCTTGTTTaGAGTACAGTTTCCGATCCC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVVGSLV*STVSDP
Trigger: GGGATCGGAAACTGTACTGCAAACAAGACTACCAAC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCATGTGTCTGCACGTaGCTCTCTGTCCCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRACVCT*LSVPLR
Trigger: GCGCAAAGGGACAGAGAGGCACGTGCAGACACATGC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTTGTTTCCATTTTCTaGTGTTGTGGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVVSIF*CCGKRW
Trigger: CCACCTCTTCCCACAACAGCAGAAAATGGAAACAAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACAAGGAAAACAGGAATaGCCGGTGGCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRQGKQE*PVAHPH
Trigger: GTGGGGATGGGCCACCGGCCATTCCTGTTTTCCTTG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 72 bp CATATACACAGAAAACAGATGTGGCTTAGCTGTCACTaGCGTGTGGGGCCCAGGGATTTAGCTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HIHRKQMWLSCH*RVGPRDLATAG
Trigger: CCCTGCTGTAGCTAAATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCCACATCTGTTTTCTGTGTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
3UTR CAA 72 bp TGCAATTGCCCTGGGAGAAGGGGGCAGGAAATGCAATaGGAATGTGTCCCCCAAAGAGGATGCATTAATGGG +
Preference number: 4 (lower is better)
Translates to: CNCPGRRGQEMQ*ECVPQRGCING
Trigger: CCCATTAATGCATCCTCTTTGGGGGACACATTCCAATTGCATTTCCTGCCCCCTTCTCCCAGGGCAATTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAAAACAAAACAGTAGGTaGCCCCATCCTGCATATACA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAKQNSR*PHPAYT
Trigger: TGTATATGCAGGATGGGGGCACCTACTGTTTTGTTT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCTTCATTATCCTTACTTaGTCAAAGGTTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVFIILT*SKVGPG
Trigger: GCCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAA...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCTTCATTATCCTTACTTaGTCAAAGGTTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGFIILT*SKVGPG
Trigger: GCCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAA...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATGCATCTTGTTCATCTaGGAGCCACACCCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRCILFI*EPHPVR
Trigger: CCGGACTGGGTGTGGCTCGCAGATGAACAAGATGCA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGCGATGTCATGGAAGATaGAGTCGTTCCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKRCHGR*SRSLAF
Trigger: AAATGCCAGGGAACGACTCCATCTTCCATGACATCG...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CCA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTCGAGTAAGAAGGAATaGAAAAGGAAAGAGGTCACG +
Preference number: 4 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSSKKE*KRKEVT
Trigger: CGTGACCTCTTTCCTTTTCCATTCCTTCTTACTCGA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACACATTCTCTTTTGCTCTaGAGACCACACAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: RGCINGPMSNRERPARSTHSLLL*RPHSYL
Trigger: GAGATAACTGTGTGGTCTCCAGAGCAAAAGAGAATG...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACAGATGGGGGCAGAGTaGGGAATCAGCCTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRQMGAE*GISLLL
Trigger: TAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACCAAGGGCCAAATGTTaGAGGGGTCTTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRPRAKC*RGLSCS
Trigger: GGAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR TCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACAAGTTGTGACCCCCTaGCCTGGAGGTCATTCACAA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRQVVTP*PGGHSQ
Trigger: TTGTGAATGACCTCCAGGTCAGGGGGTCACAACTTG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATGCAAACACTCCTCGTaGCAGGACGACTCGTTGACT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRCKHSS*QDDSLT
Trigger: AGTCAACGAGTCGTCCTGGCACGAGGAGTGTTTGCA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGGTTGGTAGTCTTGTTTaGAGTACAGTTTCCGATCCC +
Preference number: 4 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKVGSLV*STVSDP
Trigger: GGGATCGGAAACTGTACTGCAAACAAGACTACCAAC...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATTTTTGTCCCTCCTCTaGCCTGTGTTACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRFLSLL*PVLPGA
Trigger: TGCCCCAGGTAACACAGGGCAGAGGAGGGACAAAAA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTATCTCTAAGGTCATGTaGCCAAATCATTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSISKVM*PNHCLL
Trigger: CAAAAGACAATGATTTGGCCACATGACCTTAGAGAT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGAGGCTCATTGGCAATaGTGCCTTCCAAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRREAHWQ*CLPRAK
Trigger: TTTGGCCCTTGGAAGGCACCATTGCCAATGAGCCTC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTCATTGGCAATGGTaGCTTCCAAGGGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRAHWQW*LPRAKC
Trigger: ACATTTGGCCCTTGGAAGGCACCATTGCCAATGAGC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTCAAATCATTGTCTTTTaGGCCAAATTAACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSQIIVF*AKLTEE
Trigger: TTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTG...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAATCTCTAAGGTCATGTaGCCAAATCATTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAISKVM*PNHCLL
Trigger: CAAAAGACAATGATTTGGCCACATGACCTTAGAGAT...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACAGGGAAGTGGAACTTaGTCTTTTGCCAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRQGSGT*SFAKTP
Trigger: GGGAGTCTTGGCAAAAGACCAAGTTCCACTTCCCTG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAAATGTGTCTGGGGATaGCGGGTGGGTAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRKCVWG*RVGSEN
Trigger: ATTCTCACTACCCACCCGCCATCCCCAGACACATTT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACAAATCATTGTCTTTTaGGCCAAATTAACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAQIIVF*AKLTEE
Trigger: TTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAGAGGGCCCCAAAGGTaGAAAAGGGACATTCATTAT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRRGPQR*KRDIHY
Trigger: ATAATGAATGTCCCTTTTCCACCTTTGGGGCCCTCT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACTGCCCTGTGTTACCTaGGGCAATTATTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRLPCVT*GNYFLF
Trigger: AAAGAGGAAATAATTGCCCCAGGTAACACAGGGCAG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR GCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAAAACAAAACAGTAGGTaGCCCCATCCTGCATATACA +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRKQNSR*PHPAYT
Trigger: TGTATATGCAGGATGGGGGCACCTACTGTTTTGTTT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CCA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACATTCTCTTTTGCTCTaGAGACCACACAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRHSLLL*RPHSYL
Trigger: GAGATAACTGTGTGGTCTCCAGAGCAAAAGAGAATG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp TCTGTCACCTGCTTGTCAGTCCCGGAACCCGGCGGCGGCGGCTGCTaGAGACGGAGCCGCGGGGAGGAGGCGGCGGCGGCGGTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: SVTCLSVPEPGGGGC*RRSRGEEAAAAVAV
Trigger: CACCGCCACCGCCGCCGCCGCCTCCTCCCCGCGGCTCCGTCTGCAGCAGCCGCCGCCGCCGGGTTCCGGGACTGACAAGCAGGTGACAGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp TCCTCTGTCACCTGCTTGTCAGTCCCGGAACCCGGCGGCGGCGGCTaGTGCAGACGGAGCCGCGGGGAGGAGGCGGCGGCGGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SSVTCLSVPEPGGGG*CRRSRGEEAAAAVA
Trigger: CGCCACCGCCGCCGCCGCCTCCTCCCCGCGGCTCCGTCTGCAGCAGCCGCCGCCGCCGGGTTCCGGGACTGACAAGCAGGTGACAGAGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp GCGGGCCGGGGCGGCTGCAGCCCGCGCCGCGCTCTCCCGGACACTTaGAGCCACGCGCGCCGGCTCCTCTGTCACCTGCTTGTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: AGRGGCSPRRALPDT*SHARRLLCHLLVSP
Trigger: GGGACTGACAAGCAGGTGACAGAGGAGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGCGCGGCGCGGGCTGCAGCCGCCCCGGCCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp AGCGACTCGGGACCTGTTGCTATATCCATGGGACGCGGGGCGCGCTaGGGACCCCGCCGGCCGGGCTGCTCGCCCGCCGGCCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: SDSGPVAISMGRGAR*GPRRPGCSPAGPST
Trigger: GGTGGACGGGCCGGCGGGCGAGCAGCCCGGCCGGCGGGGTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp CGTCTGCCCGCGAGGGAAGCACCTCTCCAGCGACTCGGGACCTGTTaGTATATCCATGGGACGCGGGGCGCGCTGCGGACCCCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RLPAREAPLQRLGTC*YIHGTRGALRTPPA
Trigger: GGCCGGCGGGGTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTCGCGGGCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 90 bp GAGGGAAGCACCTCTCCAGCGACTCGGGACCTGTTGCTATATCCATaGGACGCGGGGCGCGCTGCGGACCCCGCCGGCCGGGCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: EGSTSPATRDLLLYP*DAGRAADPAGRAAR
Trigger: GCGAGCAGCCCGGCCGGCGGGGTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp GGCCCCGGCTCACCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGCGCCAGCTTCTTCATCTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: GPGSPWPSRWEFCCS*CCWCRRASFFIFAL
Trigger: AAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTGAGCCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS GCA 90 bp GCTGTGGTGGGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTCCATaGGGCTGGACAGGACCTCCTGGCCCAGCCGCTGGGAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: AVVGPAACRKPSCPP*GWTGPPGPAAGSSA
Trigger: AGCAGAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS CCA 90 bp CCGTGCGCCTGGCTGGCTCTCAGGAGGCGAAGTAGGAACTCTGCATaGAGTAGAGCCGGTCGATGGGGTTCCCCACGCGGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PCAWLALRRRSRNSA*SRAGRWGSPRGPAG
Trigger: CCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGAGAGCCAGCCAGGCGCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 90 bp GTGGGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTCCATGCGGCTaGACAGGACCTCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VGPAACRKPSCPPCG*TGPPGPAAGSSAAP
Trigger: AGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp CCCGGCTCACCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTGCTaGTGCTGGTGCCGCCGCGCCAGCTTCTTCATCTTTGCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: PGSPWPSRWEFCCSC*CWCRRASFFIFALW
Trigger: CCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTGAGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS-3UTR CAA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGCTGGTGGTGAGGGCTaGCTGACACGCCGCGCACTG +
Preference number: 5 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLAGGEG*LTRRAL
Trigger: CAGTGCGCGGCGTGTCAGCAAGCCCTCACCACCAGC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGATGGTCCGGGGTCGCTaGGGCCTCCGCGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLMVRGR*GLRGSF
Trigger: GAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCAT...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 90 bp AGCCCAGGTGGTACACGCACTCCAGCGCCCGCATCACGAACTCGGTaGGGGCGATCTTCTCCATGCAGCCGCTGCACTTGGCCGCGAAGA +
Preference number: 5 (lower is better)
Translates to: SPGGTRTPAPASRTR*GRSSPCSRCTWPRR
Trigger: TCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 90 bp GCTGCCGTAGGGGCTCTGTTCCATGGCCACGATCTGCTGCTGTGGTaGGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTCCATGCGGCT +
Preference number: 5 (lower is better)
Translates to: AAVGALFHGHDLLLW*GQRRVGSHHALHAA
Trigger: AGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTACGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 90 bp GCTGCTGCCGTAGGGGCTCTGTTCCATGGCCACGATCTGCTGCTGTaGTGGGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTCCATGCG +
Preference number: 5 (lower is better)
Translates to: AAAVGALFHGHDLLL*WGQRRVGSHHALHA
Trigger: CGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTACGGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCGCTCTCCCGGACACTaGCAGCCACGCGCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRRSPGH*QPRAPA
Trigger: AGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGCG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp GGCTCACCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTGCTGCTaGTGGTGCCGCCGCGCCAGCTTCTTCATCTTTGCTCTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GSPWPSRWEFCCSCC*WCRRASFFIFALWF
Trigger: GAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS GCA 90 bp GACAGGACCTCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTGCTaGTGCTGGTGCCGCCGCGCCAGCTTCTTCATCTTTGCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: DRTSWPSRWEFCCSC*CWCRRASFFIFALW
Trigger: CCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp CTGGACAGGACCTCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGCGCCAGCTTCTTCATCTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LDRTSWPSRWEFCCS*CCWCRRASFFIFAL
Trigger: AAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACGCTCTCCCGGACACTaGCAGCCACGCGCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: RVGPRDLATAGQGESLRSRSPGH*QPRAPA
Trigger: AGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGCG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGGCTGGTGGTGAGGGCTaGCTGACACGCCGCGCACTG +
Preference number: 5 (lower is better)
Translates to: GDRASAPESAQDVPGTIQAGGEG*LTRRAL
Trigger: CAGTGCGCGGCGTGTCAGCAAGCCCTCACCACCAGC...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp AGGACCTCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTGCTGCTaGTGGTGCCGCCGCGCCAGCTTCTTCATCTTTGCTCTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: RTSWPSRWEFCCSCC*WCRRASFFIFALWF
Trigger: GAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGTCCTCTGTCACCTGCTaGTCAGTCCCGGAACCCGGC +
Preference number: 5 (lower is better)
Translates to: PQQPSLLALTGIELSRLGSSVTC*SVPEPG
Trigger: GCCGGGTTCCGGGACTGACAAGCAGGTGACAGAGGA...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGATGCCGTCCAACATCTaGGCGCAGTCCGTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLMPSNI*AQSVCP
Trigger: CGGGCAGACGGACTGCGCCAAGATGTTGGACGGCAT...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGATGCAGCCGCTGCACTaGGCCGCGAAGAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: PQQPSLLALTGIELSRLGMQPLH*AAKSCW
Trigger: CCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCAT...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGAGCAGCTGGCCCTCCTaGAGCACGAATTCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGSSWPS*STNSSP
Trigger: GGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCT...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGAGCAGCTGGCCCTCCTaGAGCACGAATTCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLSSWPS*STNSSP
Trigger: GGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCT...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAATGGTCCGGGGTCGCTaGGGCCTCCGCGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RVGPRDLATAGQGESLRSMVRGR*GLRGSF
Trigger: GAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCAT...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGACCTCGAAGGAGGCCTaGAAGGCTCTTCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLTSKEA*KALRCC
Trigger: GCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGT...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGTCGTTCCCTGGCATTaGGGGCGGCGTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSVVPWH*GRREAL
Trigger: CAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGAC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CAA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGCCAGGCTGCCCCCATTaGGGCCCAGGCTGGGATACA +
Preference number: 5 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRPGCPH*GPGWDT
Trigger: TGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTGG...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGCCATGCCCAGCTTTTaGTCCCTCCTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQAMPSF*SLLCPV
Trigger: CACAGGGCAGAGGAGGGACAAAAAGCTGGGCATGGC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGGTGGTCACCTGGCATTaGGGGCGGCGTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLVVTWH*GRREAL
Trigger: CAGGGCCTCACGCCGCCCCAAATGCCAGGTGACCAC...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373474.9
CDS GCA 90 bp TGCTCCTCCATCTTGATGCCGTCCAACATCTTGGCGCAGTCCGTCTaGCCGCGAGGGAAGCACCTCTCCAGCGACTCGGGACCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: CSSILMPSNILAQSV*PRGKHLSSDSGPVA
Trigger: AGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTCGCGGGCAGACGGACTGCGCCAAGATGTTGGACGGCATCAAGATGGAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGGATAGGGCATCTGCCCCTGAATCTGCCCAGGATGTCCCTGGCACGATTCAGATGCCGTCCAACATCTaGGCGCAGTCCGTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GDRASAPESAQDVPGTIQMPSNI*AQSVCP
Trigger: CGGGCAGACGGACTGCGCCAAGATGTTGGACGGCAT...CTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCATGCCGTCCAACATCTaGGCGCAGTCCGTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPMPSNI*AQSVCP
Trigger: CGGGCAGACGGACTGCGCCAAGATGTTGGACGGCAT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCATGCAGCCGCTGCACTaGGCCGCGAAGAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPMQPLH*AAKSCW
Trigger: CCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCAT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAACGCCTCATGACACCATaGTCCTGGGGCTTGCATGGA +
Preference number: 5 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQRLMTP*SWGLHG
Trigger: TCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCG...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGGCAGGCCCTGCATCTaGTTCATCTGCGAGCCACAC +
Preference number: 5 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGGRPCI*FICEPH
Trigger: GTGTGGCTCGCAGATGAACAAGATGCAGGGCCTGCC...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 90 bp CATCCTCGCTCTTCACGGAGTCGGACTCGTCGGGGCTCACGGAGCTaGGCAGGTCCTTCTCCTTCTCGTAGTCACCCTTGCACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: HPRSSRSRTRRGSRS*AGPSPSRSHPCTAA
Trigger: AGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 90 bp GGGCCTGCAGGGAGCCCACGTCTGAGGAGCCGAGGAAGCAGTCGCTaGGGCTGGTTAAGGAGGTATCGCTGTCGATGTCATGGAAGATGG +
Preference number: 5 (lower is better)
Translates to: GPAGSPRLRSRGSSR*GWLRRYRCRCHGRW
Trigger: CCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 90 bp ACTCCAGCGCCCGCATCACGAACTCGGTGGGGGCGATCTTCTCCATaGAGCCGCTGCACTTGGCCGCGAAGAGCTGTTGGTAGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: TPAPASRTRWGRSSP*SRCTWPRRAVGSLV
Trigger: AACAAGACTACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGTCCTCTGTCACCTGCTaGTCAGTCCCGGAACCCGGC +
Preference number: 5 (lower is better)
Translates to: WSDATWFWGLHLPLELVGSSVTC*SVPEPG
Trigger: GCCGGGTTCCGGGACTGACAAGCAGGTGACAGAGGA...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCTGCCAGGACGACTCGTaGACTCGCATCAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPCQDDS*TRIRKR
Trigger: CCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCA...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGCTGGTGGTGAGGGCTaGCTGACACGCCGCGCACTG +
Preference number: 5 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVAGGEG*LTRRAL
Trigger: CAGTGCGCGGCGTGTCAGCAAGCCCTCACCACCAGC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTAGCAGCTGGCCCTCCTaGAGCACGAATTCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSSSWPS*STNSSP
Trigger: GGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCT...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCCAGAGCTCAAGGATGGAGCCAGGCAGGCATCAGGCAATCCTCCTTCCTGAGGACCTCGAAGGAGGCCTaGAAGGCTCTTCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PRAQGWSQAGIRQSSFLRTSKEA*KALRCC
Trigger: GCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGT...CCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGTCGTTCCCTGGCATTaGGGGCGGCGTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAVVPWH*GRREAL
Trigger: CAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGAC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS-3UTR CAA 90 bp CCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCGCCTCATGACACCATaGTCCTGGGGCTTGCATGGA +
Preference number: 5 (lower is better)
Translates to: PQQPSLLALTGIELSRLGRLMTP*SWGLHG
Trigger: TCCATGCAAGCCCCAGGACAATGGTGTCATGAGGCG...CCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGCACAATCTTCTGCAATaGCCCTGGGAGAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLHNLLQ*PWEKGA
Trigger: TGCCCCCTTCTCCCAGGGCAATTGCAGAAGATTGTG...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCGGCAGGCCCTGCATCTaGTTCATCTGCGAGCCACAC +
Preference number: 5 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPGRPCI*FICEPH
Trigger: GTGTGGCTCGCAGATGAACAAGATGCAGGGCCTGCC...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGTGGAACTTGGTCTTTaGCCAAGACTCCCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLVELGL*PRLPLP
Trigger: GGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCAC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAATCCAAGGGCCAAATGTaGGAGGGGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQSKGQM*EGSFLL
Trigger: GAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGGA...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 90 bp CCTTCTCCTTCTCGTAGTCACCCTTGCACAGCAGCTGGCCCTCCTTaGGCACGAATTCGTCGCCCTTGCGTAGCTGCCGTTCACACACGC +
Preference number: 5 (lower is better)
Translates to: PSPSRSHPCTAAGPP*ARIRRPCVAAVHTR
Trigger: GCGTGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGTCACCTGCTaGTCAGTCCCGGAACCCGGC +
Preference number: 5 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASSSVTC*SVPEPG
Trigger: GCCGGGTTCCGGGACTGACAAGCAGGTGACAGAGGA...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCGACTCGGGACCTGTaGCTATATCCATGGGACGCG +
Preference number: 5 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSATRDL*LYPWDA
Trigger: CGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACCAGGCTGCCCCCATTaGGGCCCAGGCTGGGATACA +
Preference number: 5 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAPGCPH*GPGWDT
Trigger: TGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTGG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCCCATCTACCGGTCTGGCTGTACCCAACGGGCACAGTGGTCAGGCCCAGCTGGACCTAGTGAGCTCCTaGTCACTGGAGGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: CPSTGLAVPNGHSGQAQLDLVSS*SLEVCE
Trigger: CTCACATACCTCCAGTGACAAGGAGCTCACTAGGTC...CAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGCACAATCTTCTGCAATaGCCCTGGGAGAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGHNLLQ*PWEKGA
Trigger: TGCCCCCTTCTCCCAGGGCAATTGCAGAAGATTGTG...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAGCCTCTTTCCCTCTCTaGCCTCAGGGTTTCCAACTA +
Preference number: 5 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQASFPL*PQGFQL
Trigger: TAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGGC...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGGCAGGCCCTGCATCTaGTTCATCTGCGAGCCACAC +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRGRPCI*FICEPH
Trigger: GTGTGGCTCGCAGATGAACAAGATGCAGGGCCTGCC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCCATGCCCAGCTTTTaGTCCCTCCTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSAMPSF*SLLCPV
Trigger: CACAGGGCAGAGGAGGGACAAAAAGCTGGGCATGGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGCAAAGGAGAAGAGGCTaGTCCCTGCCAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLQRRRG*SLPGPA
Trigger: AGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTG...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTGCGACTCGGGACCTGTaGCTATATCCATGGGACGCG +
Preference number: 5 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSATRDL*LYPWDA
Trigger: CGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGC...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCATGCAGCCGCTGCACTaGGCCGCGAAGAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGMQPLH*AAKSCW
Trigger: CCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCAT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TCTGGACTCTCTGGCTGGGCCGGAGAGTCTGGCTTTCCTTCTAGGAGACACCCCAGGCATCAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGLSGWAGESGFPSRRHPRHQNH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCCT...GGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGGAAGGGTGCCACAGCAGGAGAGGTGATGTGCCTGCTCACTTCTGGCCGGCTGGTCCCTTCCAACTTATaGGGTCTGAGAGAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: RKGATAGEVMCLLTSGRLVPSNL*GLREKG
Trigger: GCCCTTCTCTCTCAGACCCAATAAGTTGGAAGGGAC...CAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGTGGAACTTGGTCTTTaGCCAAGACTCCCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSVELGL*PRLPLP
Trigger: GGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCAC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTTCCTCTGCGTGCTCCTCCATCTaGATGCCGTCCAACATCTTG +
Preference number: 5 (lower is better)
Translates to: GPRLGYNWVRCFKFASSSACSSI*MPSNIL
Trigger: CAAGATGTTGGACGGCATCAAGATGGAGGAGCACGC...AGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGCGTGCTCCTCCATCTaGATGCCGTCCAACATCTTG +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRACSSI*MPSNIL
Trigger: CAAGATGTTGGACGGCATCAAGATGGAGGAGCACGC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTACGAATTCGTCGCCCTaGCGTAGCTGCCGTTCACAC +
Preference number: 5 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSTNSSP*RSCRSH
Trigger: GTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGAGGCATCAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRRHQNH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCCT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCTGACAGGGATAGAGTaGAGCAGACTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AFLLGDTPQGRPCILFICLTGIE*SRLGLG
Trigger: CCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACTGACAGGGATAGAGTaGAGCAGACTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSALTGIE*SRLGLG
Trigger: CCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GGGCTAGCTGGCTGCTGGGGCCCAATGGGTGACACGAGGCCACATGTCAGGCAAACCTCTCATTCTCTTTaGCTCTGGAGACCACACAGT +
Preference number: 5 (lower is better)
Translates to: GLAGCWGPMGDTRPHVRQTSHSL*LWRPHS
Trigger: ACTGTGTGGTCTCCAGAGCAAAAGAGAATGAGAGGT...TTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGCCATGCCCAGCTTTTaGTCCCTCCTCTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: AFLLGDTPQGRPCILFICAMPSF*SLLCPV
Trigger: CACAGGGCAGAGGAGGGACAAAAAGCTGGGCATGGC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCAAAGGAGAAGAGGCTaGTCCCTGCCAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: AFLLGDTPQGRPCILFICQRRRG*SLPGPA
Trigger: AGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCCAAAGGAGAAGAGGCTaGTCCCTGCCAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVQRRRG*SLPGPA
Trigger: AGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTG...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTGACCTGGAGGTCATTCACAAACCACAGGGGACAGTGGGGCACAACGTCCCTGTCCAAGGGCCAAATGTaGGAGGGGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LTWRSFTNHRGQWGTTSLSKGQM*EGSFLL
Trigger: GAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGGA...CAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCTGGAGGCTCTGTTGTCTGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGGGCCGCGAAGAGCTGTaGGTAGTCTTGTTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: PGGSVVWSDATWFWGLHLGREEL*VVLFAV
Trigger: TACTGCAAACAAGACTACCAACAGCTCTTCGCGGCC...CAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAACGAATTCGTCGCCCTaGCGTAGCTGCCGTTCACAC +
Preference number: 5 (lower is better)
Translates to: RGCINGPMSNRERPARSTTNSSP*RSCRSH
Trigger: GTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGT...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAATGGTCCGGGGTCGCTaGGGCCTCCGCGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRMVRGR*GLRGSF
Trigger: GAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCAT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCACCCCTGGAGGCTCTGTaGTCTGGTCTGATGCTACCT +
Preference number: 5 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAPLEAL*SGLMLP
Trigger: AGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGG...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAGGATGCATTAATGGGCCAATGTCAAACAGGGAGAGGCCAGCCCGGTCCACAGTGGAACTTGGTCTTTaGCCAAGACTCCCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: RGCINGPMSNRERPARSTVELGL*PRLPLP
Trigger: GGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCAC...TGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGCAGCAAAGAGGCTCATaGGCAATGGTGCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: WSDATWFWGLHLPLELVGQQRGS*AMVPSK
Trigger: CTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCTG...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp ACAGAACAGGTTGAACTTAGAGGATTCCAGAGATCCAGGCAGAGGGCCCCAAAGTGCCAGGACGACTCGTaGACTCGCATCAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: TEQVELRGFQRSRQRAPKCQDDS*TRIRKR
Trigger: CCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCA...CTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGGGGCAGGAAATGCAATaGGAATGTGTCCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRGQEMQ*ECVPQR
Trigger: TCTTTGGGGGACACATTCCAATTGCATTTCCTGCCC...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGTCCCTTCCAACTTATaGGGTCTGAGAGAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: RVGPRDLATAGQGESLRSVPSNL*GLREKG
Trigger: GCCCTTCTCTCTCAGACCCAATAAGTTGGAAGGGAC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCAGCCTCTTTCCCTCTCTaGCCTCAGGGTTTCCAACTA +
Preference number: 5 (lower is better)
Translates to: RVGPRDLATAGQGESLRSASFPL*PQGFQL
Trigger: TAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGGC...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCTCCAAGGGCCAAATGTaGGAGGGGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: AFLLGDTPQGRPCILFICSKGQM*EGSFLL
Trigger: GAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGGA...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCATTTGGGCCCAGGCTGGGATACAACTGGGTCCGATGCTTCAAGTTCGCCTCTCAGCAAAGAGGCTCATaGGCAATGGTGCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PFGPRLGYNWVRCFKFASQQRGS*AMVPSK
Trigger: CTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCTG...AGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CGTGTGGGGCCCAGGGATTTAGCTACAGCAGGGCAGGGTGAATCTCTAAGGTCACAGCAAAGAGGCTCATaGGCAATGGTGCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RVGPRDLATAGQGESLRSQQRGS*AMVPSK
Trigger: CTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCTG...TGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCGGCCGCGAAGAGCTGTaGGTAGTCTTGTTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: AFLLGDTPQGRPCILFICGREEL*VVLFAV
Trigger: TACTGCAAACAAGACTACCAACAGCTCTTCGCGGCC...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTAGTGCAGGCCGCGAAGAGCTGTaGGTAGTCTTGTTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: CSDRDRVEQTGAGDGSSAGREEL*VVLFAV
Trigger: TACTGCAAACAAGACTACCAACAGCTCTTCGCGGCC...TGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGACCTAGTGAGCTCCTaGTCACTGGAGGTATGTGAG +
Preference number: 5 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVDLVSS*SLEVCE
Trigger: CTCACATACCTCCAGTGACAAGGAGCTCACTAGGTC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCCCCAGCAGCCCAGCCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGATTCATTATCCTTACTaGCTCAAAGGTTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: APAAQPPCSDRDRVEQTGIHYPY*LKGWTR
Trigger: CCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAAT...CCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCGTCCCTTCCAACTTATaGGGTCTGAGAGAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGVPSNL*GLREKG
Trigger: GCCCTTCTCTCTCAGACCCAATAAGTTGGAAGGGAC...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGACCTCTCATTCTCTTTaGCTCTGGAGACCACACAGT +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRTSHSL*LWRPHS
Trigger: ACTGTGTGGTCTCCAGAGCAAAAGAGAATGAGAGGT...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AATCAGCCTCTTGCTAGGAGGCTGCAGGGCTTCCCAAAGGAGAAGAGGCTTGTCGGGCAGGAAATGCAATaGGAATGTGTCCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: NQPLARRLQGFPKEKRLVGQEMQ*ECVPQR
Trigger: TCTTTGGGGGACACATTCCAATTGCATTTCCTGCCC...GACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGATGCCAGGACGACTCGTaGACTCGCATCAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRCQDDS*TRIRKR
Trigger: CCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCA...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAACCTCGAAGGAGGCCTaGAAGGCTCTTCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRTSKEA*KALRCC
Trigger: GCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGT...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp TGGTCTGATGCTACCTGGTTCTGGGGGCTCCATCTGCCTCTAGAGTTGGTGGGGATTCATTATCCTTACTaGCTCAAAGGTTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: WSDATWFWGLHLPLELVGIHYPY*LKGWTR
Trigger: CCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAAT...CCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCACCTCTCATTCTCTTTaGCTCTGGAGACCACACAGT +
Preference number: 5 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGTSHSL*LWRPHS
Trigger: ACTGTGTGGTCTCCAGAGCAAAAGAGAATGAGAGGT...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGACCCCTGGAGGCTCTGTaGTCTGGTCTGATGCTACCT +
Preference number: 5 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRPLEAL*SGLMLP
Trigger: AGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGG...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CTCGCTGACCTAGTGAGCTCCTTGTCACTGGAGGTATGTGAGGGGAGGCAGAGGCCAAATCATTGTCTTTaGGGCCAAATTAACAGAGGA +
Preference number: 5 (lower is better)
Translates to: LADLVSSLSLEVCEGRQRPNHCL*GQINRG
Trigger: TCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGG...CCTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp CCTCCTTGCTCTGACAGGGATAGAGTTGAGCAGACTGGGGCTGGGGATGGATCTATTCATTATCCTTACTaGCTCAAAGGTTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: PPCSDRDRVEQTGAGDGSIHYPY*LKGWTR
Trigger: CCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAAT...AGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GCTTTCCTTCTAGGAGACACCCCTCAAGGCAGGCCCTGCATCTTGTTCATCTGCCCAAATCATTGTCTTTaGGGCCAAATTAACAGAGGA +
Preference number: 5 (lower is better)
Translates to: AFLLGDTPQGRPCILFICPNHCL*GQINRG
Trigger: TCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGG...GCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp GAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGCTGCAGAAGGGCTAGCTGGCCCAAATCATTGTCTTTaGGGCCAAATTAACAGAGGA +
Preference number: 5 (lower is better)
Translates to: EVLGEALFVRRAAEGLAGPNHCL*GQINRG
Trigger: TCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGG...GCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS-3UTR CAA 90 bp AGAAGGACCAGAACATCAACTGAGGTCCTTGGAGAGGCTCTGTTTGTAAGAAGAGGGCAGGAAATGCAATaGGAATGTGTCCCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: RRTRTSTEVLGEALFVRRGQEMQ*ECVPQR
Trigger: TCTTTGGGGGACACATTCCAATTGCATTTCCTGCCC...TCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp TGCTTGTCAGTCCCGGAACCCGGCGGCGGCGGCTGCTaGAGACGGAGCCGCGGGGAGGAGGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: CLSVPEPGGGGC*RRSRGEEAAAA
Trigger: CGCCGCCGCCGCCTCCTCCCCGCGGCTCCGTCTGCAGCAGCCGCCGCCGCCGGGTTCCGGGACTGACAAGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp GGACCTGTTGCTATATCCATGGGACGCGGGGCGCGCTaGGGACCCCGCCGGCCGGGCTGCTCGCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: GPVAISMGRGAR*GPRRPGCSPAG
Trigger: GCCGGCGGGCGAGCAGCCCGGCCGGCGGGGTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 90 bp GGCGGGCCGGGGCGGCTGCAGCCCGCGCCGCGCTCTCCCGGACACTaGCAGCCACGCGCGCCGGCTCCTCTGTCACCTGCTTGTCAGTCC +
Preference number: 6 (lower is better)
Translates to: GGPGRLQPAPRSPGH*QPRAPAPLSPACQS
Trigger: GGACTGACAAGCAGGTGACAGAGGAGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGCGCGGCGCGGGCTGCAGCCGCCCCGGCCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp CGCGGGGCTCCGGGCGCGCTCCCCGCGCTACTCCAGTaGCATGGTGCGCCCGCTGAGCCGCCGGGTTTAGAG +
Preference number: 6 (lower is better)
Translates to: RGAPGALPALLQ*HGAPAEPPGLE
Trigger: CTCTAAACCCGGCGGCTCAGCGGGCGCACCATGGCACTGGAGTAGCGCGGGGAGCGCGCCCGGAGCCCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 72 bp GGGCGGCTGCAGCCCGCGCCGCGCTCTCCCGGACACTaGCAGCCACGCGCGCCGGCTCCTCTGTCACCTGCT +
Preference number: 6 (lower is better)
Translates to: GRLQPAPRSPGH*QPRAPAPLSPA
Trigger: AGCAGGTGACAGAGGAGCCGGCGCGCGTGGCTGCAAGTGTCCGGGAGAGCGCGGCGCGGGCTGCAGCCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 90 bp CCGTCTGCCCGCGAGGGAAGCACCTCTCCAGCGACTCGGGACCTGTaGCTATATCCATGGGACGCGGGGCGCGCTGCGGACCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PSAREGSTSPATRDL*LYPWDAGRAADPAG
Trigger: GCCGGCGGGGTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTCGCGGGCAGACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp ACACTTGCAGCCACGCGCGCCGGCTCCTCTGTCACCTaGTTGTCAGTCCCGGAACCCGGCGGCGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: TLAATRAGSSVT*LSVPEPGGGGC
Trigger: GCAGCCGCCGCCGCCGGGTTCCGGGACTGACAAGCAGGTGACAGAGGAGCCGGCGCGCGTGGCTGCAAGTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp GGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTCCATaGGGCTGGACAGGACCTCCTGGCCCAGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: GPAACRKPSCPP*GWTGPPGPGPA
Trigger: GGCAGGGCCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS GCA 72 bp GGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTCCATaGGGCTGGACAGGACCTCCTGGCCCAGCCGCTGGG +
Preference number: 6 (lower is better)
Translates to: GPAACRKPSCPP*GWTGPPGPAAG
Trigger: CCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS CAA 72 bp CTTCGCTGCTGCGTGGTGAGGATGGTCCGGGGTCGCTaGGGCCTCCGCGGGTCCTTCCCGTCATCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: LRCCVVRMVRGR*GLRGSFPSSPL
Trigger: CAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp AGCACCCCCAGAGTGGCGGGCCCGGGGCGCAGGGCGTaGTCCTCCATCTTGATGCCGTCCAACATCTTGGCG +
Preference number: 6 (lower is better)
Translates to: STPRVAGPGRRA*SSILMPSNILA
Trigger: CGCCAAGATGTTGGACGGCATCAAGATGGAGGAGCACGCCCTGCGCCCCGGGCCCGCCACTCTGGGGGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 90 bp CCGGGGCGCAGGGCGTGCTCCTCCATCTTGATGCCGTCCAACATCTaGGCGCAGTCCGTCTGCCCGCGAGGGAAGCACCTCTCCAGCGAC +
Preference number: 6 (lower is better)
Translates to: PGRRACSSILMPSNI*AQSVCPRGKHLSSD
Trigger: GTCGCTGGAGAGGTGCTTCCCTCGCGGGCAGACGGACTGCGCCAAGATGTTGGACGGCATCAAGATGGAGGAGCACGCCCTGCGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 90 bp TTGAAGGCTCTTCGCTGCTGCGTGGTGAGGATGGTCCGGGGTCGCTaGGGCCTCCGCGGGTCCTTCCCGTCATCCCCGCTGCCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: LKALRCCVVRMVRGR*GLRGSFPSSPLPLL
Trigger: GAGCAAGGGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp GCGAGGGAAGCACCTCTCCAGCGACTCGGGACCTGTTaGTATATCCATGGGACGCGGGGCGCGCTGCGGACC +
Preference number: 6 (lower is better)
Translates to: AREAPLQRLGTC*YIHGTRGALRT
Trigger: GGTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp TCACCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGCGCCAGCTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: SPWPSRWEFCCS*CCWCRRASFFI
Trigger: GATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS GCA 72 bp ACCTCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTaGTGCTGCTGGTGCCGCCGCGCCAGCTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: TSWPSRWEFCCS*CCWCRRASFFI
Trigger: GATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS CAA 72 bp CGCGAGGGAAGCACCTCTCCAGCGACTCGGGACCTGTaGCTATATCCATGGGACGCGGGGCGCGCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: REGSTSPATRDL*LYPWDAGRAAD
Trigger: GTCCGCAGCGCGCCCCGCGTCCCATGGATATAGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 72 bp GGAAGATGGAGTCGTTCCCTGGCATTTGGGGCGGCGTaGGGCCCTGCTGGAAGGGGTCGCTGCTGCCGTAGG +
Preference number: 6 (lower is better)
Translates to: GRWSRSLAFGAA*GPAGRGRCCRR
Trigger: CCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS GCA 72 bp CCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTGCTaGTGCTGGTGCCGCCGCGCCAGCTTCTTCATCTTT +
Preference number: 6 (lower is better)
Translates to: PWPSRWEFCCSC*CWCRRASFFIF
Trigger: AAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355497.10
CDS CCA 72 bp GCGGCGTGTAGGAAGCCATCATGCCCTCCATGCGGCTaGACAGGACCTCCTGGCCCAGCCGCTGGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: AACRKPSCPPCG*TGPPGPAAGSS
Trigger: AGAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp TCCTGGCCCAGCCGCTGGGAGTTCTGCTGCTCCTGCTaGTGCTGGTGCCGCCGCGCCAGCTTCTTCATCTTT +
Preference number: 6 (lower is better)
Translates to: SWPSRWEFCCSC*CWCRRASFFIF
Trigger: AAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp GGTACACGCACTCCAGCGCCCGCATCACGAACTCGGTaGGGGCGATCTTCTCCATGCAGCCGCTGCACTTGG +
Preference number: 6 (lower is better)
Translates to: GTRTPAPASRTR*GRSSPCSRCTW
Trigger: CCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp GGGGCTCTGTTCCATGGCCACGATCTGCTGCTGTGGTaGGGCCAGCGGCGTGTAGGAAGCCATCATGCCCTC +
Preference number: 6 (lower is better)
Translates to: GALFHGHDLLLW*GQRRVGSHHAL
Trigger: GAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp CCCGCATCACGAACTCGGTGGGGGCGATCTTCTCCATaGAGCCGCTGCACTTGGCCGCGAAGAGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: PASRTRWGRSSP*SRCTWPRRAVG
Trigger: ACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp GTAGGGGCTCTGTTCCATGGCCACGATCTGCTGCTGTaGTGGGGCCAGCGGCGTGTAGGAAGCCATCATGCC +
Preference number: 6 (lower is better)
Translates to: VGALFHGHDLLL*WGQRRVGSHHA
Trigger: GGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp TGGCTGGCTCTCAGGAGGCGAAGTAGGAACTCTGCATaGAGTAGAGCCGGTCGATGGGGTTCCCCACGCGGG +
Preference number: 6 (lower is better)
Translates to: WLALRRRSRNSA*SRAGRWGSPRG
Trigger: CCCGCGTGGGGAACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGAGAGCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 72 bp GCGCACTGCAAACACTCCTCGTGCCAGGACGACTCGTaGACTCGCATCAGGAAGCGGTCGGAGATGGGCCGC +
Preference number: 6 (lower is better)
Translates to: AHCKHSSCQDDS*TRIRKRSEMGR
Trigger: GCGGCCCATCTCCGACCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCACGAGGAGTGTTTGCAGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 90 bp TCTCGGACCTTTCGGCAAGGCTTCGACGAGACCTCGAAGGAGGCCTaGAAGGCTCTTCGCTGCTGCGTGGTGAGGATGGTCCGGGGTCGC +
Preference number: 6 (lower is better)
Translates to: SRTFRQGFDETSKEA*KALRCCVVRMVRGR
Trigger: GCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 72 bp CGCACTGCAAACACTCCTCGTGCCAGGACGACTCGTTaGCTCGCATCAGGAAGCGGTCGGAGATGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: RTANTPRARTTR*LASGSGRRWAA
Trigger: AGCGGCCCATCTCCGACCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCACGAGGAGTGTTTGCAGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp ATCTTGATGCCGTCCAACATCTTGGCGCAGTCCGTCTaGCCGCGAGGGAAGCACCTCTCCAGCGACTCGGGA +
Preference number: 6 (lower is better)
Translates to: ILMPSNILAQSV*PRGKHLSSDSG
Trigger: TCCCGAGTCGCTGGAGAGGTGCTTCCCTCGCGGGCAGACGGACTGCGCCAAGATGTTGGACGGCATCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp GATGGAGTCGTTCCCATAGGGGTTCATGTGGTCACCTaGCATTTGGGGCGGCGTGAGGCCCTGCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: DGVVPIGVHVVT*HLGRREALLEG
Trigger: CCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGTGACCACATGAACCCCTATGGGAACGACTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373474.9
CDS CAA 90 bp GCAGTACAGTTTCCGATCCCGGAAGTAGCAGCTGGTGGTGAGGGCTaGCTGACACGCCGCGCACTGCAAACACTCCTCGTGCCAGGACGA +
Preference number: 6 (lower is better)
Translates to: AVQFPIPEVAAGGEG*LTRRALQTLLVPGR
Trigger: TCGTCCTGGCACGAGGAGTGTTTGCAGTGCGCGGCGTGTCAGCAAGCCCTCACCACCAGCTGCTACTTCCGGGATCGGAAACTGTACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 72 bp TCTTCACGGAGTCGGACTCGTCGGGGCTCACGGAGCTaGGCAGGTCCTTCTCCTTCTCGTAGTCACCCTTGC +
Preference number: 6 (lower is better)
Translates to: SSRSRTRRGSRS*AGPSPSRSHPC
Trigger: GCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 72 bp TTTCCGATCCCGGAAGTAGCAGCTGGTGGTGAGGGCTaGCTGACACGCCGCGCACTGCAAACACTCCTCGTG +
Preference number: 6 (lower is better)
Translates to: FPIPEVAAGGEG*LTRRALQTLLV
Trigger: CACGAGGAGTGTTTGCAGTGCGCGGCGTGTCAGCAAGCCCTCACCACCAGCTGCTACTTCCGGGATCGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 72 bp TCTCGTAGTCACCCTTGCACAGCAGCTGGCCCTCCTTaGGCACGAATTCGTCGCCCTTGCGTAGCTGCCGTT +
Preference number: 6 (lower is better)
Translates to: SRSHPCTAAGPP*ARIRRPCVAAV
Trigger: AACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS TCA 72 bp GGGAGCCCACGTCTGAGGAGCCGAGGAAGCAGTCGCTaGGGCTGGTTAAGGAGGTATCGCTGTCGATGTCAT +
Preference number: 6 (lower is better)
Translates to: GSPRLRSRGSSR*GWLRRYRCRCH
Trigger: ATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS GCA 72 bp CGAACTCGGTGGGGGCGATCTTCTCCATGCAGCCGCTaGACTTGGCCGCGAAGAGCTGTTGGTAGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: RTRWGRSSPCSR*TWPRRAVGSLV
Trigger: AACAAGACTACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp CGGTGGGGGCGATCTTCTCCATGCAGCCGCTGCACTTaGCCGCGAAGAGCTGTTGGTAGTCTTGTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: RWGRSSPCSRCT*PRRAVGSLVCS
Trigger: ACTGCAAACAAGACTACCAACAGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CAA 72 bp TTTCGGCAAGGCTTCGACGAGACCTCGAAGGAGGCCTaGAAGGCTCTTCGCTGCTGCGTGGTGAGGATGGTC +
Preference number: 6 (lower is better)
Translates to: FRQGFDETSKEA*KALRCCVVRMV
Trigger: GACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6
CDS CCA 72 bp CTGAGGCTGGTTAAGGAGGTATCGCTGTCGATGTCATaGAAGATGGAGTCGTTCCCTGGCATTTGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LRLVKEVSLSMS*KMESFPGIWGG
Trigger: GCCGCCCCAAATGCCAGGGAACGACTCCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355497.10
ENST00000526117.6
CDS GCA 72 bp TGCACTTGGCCGCGAAGAGCTGTTGGTAGTCTTGTTTaGAGTACAGTTTCCGATCCCGGAAGTAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: CTWPRRAVGSLV*STVSDPGSSSW
Trigger: CCAGCTGCTACTTCCGGGATCGGAAACTGTACTGCAAACAAGACTACCAACAGCTCTTCGCGGCCAAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355497.10
ENST00000373474.9
ENST00000526117.6