RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMTK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000142235

Ensembl transcript IDs: ENST00000598924.1, ENST00000600059.5, ENST00000600059.6, ENST00000647709.2, ENST00000648216.1, ENST00000650440.1, ENST00000672160.1, ENST00000673139.1

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCATCCTCTaGAGCGTCCGCAGGTCTCGAGGGGGTAGCTCAGGGGACAGGCCC +
Preference number: 1 (lower is better)
Translates to: ECRCASPRAISRPIL*SVRRSRGGSSGDRP
Trigger: GGGCCTGTCCCCTGAGCTACCCCCTCGAGACCTGCGGACGCTGCAGAGGATGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR CCA 90 bp GGGAGGGCCCAGCCTCGGGGGCCTCCCCAGAGGCGGCGTCTGCGGTaGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACC +
Preference number: 1 (lower is better)
Translates to: GRAQPRGPPQRRRLR*WQWRRHPQRIPFST
Trigger: GGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGGGAGGCCCCCGAGGCTGGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR CCA 90 bp CAGATGTTGCTCTCGCGGCTCTGGTCCACCACCATGAAGGTCCCGTaGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTGGGATC +
Preference number: 1 (lower is better)
Translates to: QMLLSRLWSTTMKVP*SSPRSSGAAQRSGI
Trigger: GATCCCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAACATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR GCA 90 bp TGCTGCAGGCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTTaGTCCAGGGGCCCCGCGCTGGCTCGGAGCTCCTTCACCACCACC +
Preference number: 1 (lower is better)
Translates to: CCRLLYGCASEMNLR*SRGPALARSSFTTT
Trigger: GGTGGTGGTGAAGGAGCTCCGAGCCAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGCCTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR CCA 90 bp ATAATCAGCAGAAACGGCAGCGTCTCCACGCACAGACCCAGGCACTaGAGGACATTGGGGTGCTGCAGGCTCCTGTACGGCTGTGCTTCC +
Preference number: 1 (lower is better)
Translates to: IISRNGSVSTHRPRH*RTLGCCRLLYGCAS
Trigger: GGAAGCACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTGCGTGGAGACGCTGCCGTTTCTGCTGATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR GCA 90 bp GAAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTGGGATGCCCGTAGTCTCCGATaGGCACGGTCAGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: EGPVELPEELGRRPAQWDARSLR*ARSGQR
Trigger: CCTCTGACCTGACCGTGCGCATCGGAGACTACGGGC...ATCCCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR GCA 90 bp GCACGTAGTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCAGAGATGAACTTGCGTTaGTCCAGGGGCCCCGCGCTG +
Preference number: 2 (lower is better)
Translates to: ARSCGNAGAPARGRSPGPEMNLR*SRGPAL
Trigger: CAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTC...TGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAACTACGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR GCA 90 bp AAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTGGGATCAGTCCTCCTTGTAGTTaGTGTGGGCCAGCCCGTAGT +
Preference number: 2 (lower is better)
Translates to: KVPWSSPRSSGAAQRSGISPPCS*CGPARS
Trigger: ACTACGGGCTGGCCCACAGCAACTACAAGGAGGACT...GATCCCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR CAA 90 bp GTGCTGCAGGCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTaGCTCCAGGGGCCCCGCGCTGGCTCGGAGCTCCTTCACCACCAC +
Preference number: 2 (lower is better)
Translates to: VLQAPVRLCFRDELA*LQGPRAGSELLHHH
Trigger: GTGGTGGTGAAGGAGCTCCGAGCCAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGCCTGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR CCA 90 bp CTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGAAAATCTCTCCCAGGATCACAGACGGACGGACGCGTaGAGAGCCGGGTGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: LHHHLGGGVVGENLSQDHRRTDA*RAGWRG
Trigger: GCCGCGCCACCCGGCTCTCCACGCGTCCGTCCGTCT...GTGATCCTGGGAGAGATTTTCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR TCA 90 bp GCACGTAGTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCAGCTGTGCTTCCGAGATaGACTTGCGTTGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: ARSCGNAGAPARGRSPGPAVLPR*TCVAPG
Trigger: CCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGC...TGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAACTACGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR GCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTACCCAGAGGCGGCGTCTaGGGTGGTGGCAGTGGCGCC +
Preference number: 2 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLPRGGV*GGGSGA
Trigger: GGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGG...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR-3UTR CCA 90 bp CCTTGTAGTTGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGTCAGGTCAGCACAGACCCAGGCACTaGAGGACATTGGGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: PCSCCGPARSLRCARSGQHRPRH*RTLGCC
Trigger: GCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTG...CTGACCTGACCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCAACTACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR CCA 90 bp CAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGCCGGGGCCTCCCGTTTaGCACATGGTAGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: QKSSVQFRERRLSMEGRGPGPPV*HMVGEW
Trigger: CCACTCCCCTACCATGTGCCAAACGGGAGGCCCCGG...CCCCCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR-3UTR GCA 90 bp CTTGTAGTTGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGTCAGGTCAGAAGGACATTGGGGTGCTaGAGGCTCCTGTACGGCTGT +
Preference number: 2 (lower is better)
Translates to: LVVAVGQPVVSDAHGQVRRTLGC*RLLYGC
Trigger: ACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCT...TCTGACCTGACCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCAACTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR CCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGATTCCTGCCTCATTTaGCTCCGAGGGGGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGDSCLI*LRGGQG
Trigger: CCCCTGACCCCCTCGGAGCCAAATGAGGCAGGAATC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR-3UTR CCA 90 bp TTAAATAATGTGAAAATGCCACGCGAAGGTTTGAACCAGAGGCCCCTCCAGGGGCCGGGGCCTCCCGTTTaGCACATGGTAGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LNNVKMPREGLNQRPLQGPGPPV*HMVGEW
Trigger: CCACTCCCCTACCATGTGCCAAACGGGAGGCCCCGG...CCCCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCATTTTCACATTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR CCA 72 bp CTCTCGCGGCTCTGGTCCACCACCATGAAGGTCCCGTaGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: LSRLWSTTMKVP*SSPRSSGAAQR
Trigger: GCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGAGCCGCGAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR GCA 72 bp TGCGCCAGCCCGCGGGCGATCTCCAGGCCCATCCTCTaGAGCGTCCGCAGGTCTCGAGGGGGTAGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: CASPRAISRPIL*SVRRSRGGSSG
Trigger: CCCTGAGCTACCCCCTCGAGACCTGCGGACGCTGCAGAGGATGGGCCTGGAGATCGCCCGCGGGCTGGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR TCA 72 bp CGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTaGGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: RSLRPLSWARSG*GGTSAVSRGSR
Trigger: CCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000600059.5
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
3UTR CCA 72 bp CAGCCTCGGGGGCCTCCCCAGAGGCGGCGTCTGCGGTaGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCA +
Preference number: 3 (lower is better)
Translates to: QPRGPPQRRRLR*WQWRRHPQRIP
Trigger: TGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGGGAGGCCCCCGAGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR CCA 72 bp GAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTaGGATCCACAGGCGCTCTGGGGTCAGGTAGTAGTC +
Preference number: 3 (lower is better)
Translates to: ELPEELGRRPAQ*DPQALWGQVVV
Trigger: GACTACTACCTGACCCCAGAGCGCCTGTGGATCCCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR CAA 90 bp CATGAAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTGGGCTTCCGAGATGAACTaGCGTTGCTCCAGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: HEGPVELPEELGRRPAQWASEMN*RCSRGP
Trigger: GGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGC...CCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR CCA 72 bp CCTCGGGGGCCTCCCCAGAGGCGGCGTCTGCGGTGGTaGCAGTGGCGCCGTCATCCACAGAGGATTCCATTC +
Preference number: 3 (lower is better)
Translates to: PRGPPQRRRLRW*QWRRHPQRIPF
Trigger: GAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGGGAGGCCCCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR TCA 72 bp GGTGCTGCAGGCTCCTGTACGGCTGTGCTTCCGAGATaGACTTGCGTTGCTCCAGGGGCCCCGCGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: GAAGSCTAVLPR*TCVAPGAPRWL
Trigger: GAGCCAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGCCTGCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR GCA 72 bp CTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTTaGTCCAGGGGCCCCGCGCTGGCTCGGAGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: LLYGCASEMNLR*SRGPALARSSF
Trigger: GAAGGAGCTCCGAGCCAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR CCA 72 bp GCGTCTCCACGCACAGACCCAGGCACTGGAGGACATTaGGGTGCTGCAGGCTCCTGTACGGCTGTGCTTCCG +
Preference number: 3 (lower is better)
Translates to: ASPRTDPGTGGH*GAAGSCTAVLP
Trigger: CGGAAGCACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTGCGTGGAGACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR CAA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCCCGGGGCCTCCCGTTaGGCACATGGTAGGGGAGTG +
Preference number: 3 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRPGASR*AHGRGV
Trigger: CACTCCCCTACCATGTGCCAAACGGGAGGCCCCGGG...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR-3UTR CAA 90 bp CCCCAGTTGACAGAACTCCATAATCAGCAGAAACGGCAGCGTCTCCACGCACAGCGAGATGAACTTGCGTaGCTCCAGGGGCCCCGCGCT +
Preference number: 3 (lower is better)
Translates to: PQLTELHNQQKRQRLHAQRDELA*LQGPRA
Trigger: AGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCG...CTGTGCGTGGAGACGCTGCCGTTTCTGCTGATTATGGAGTTCTGTCAACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647709.2
3UTR-3UTR CAA 90 bp CTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGATTCCTGCCTCATTaGGCTCCGAGGGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LQAQKSSVQFRERRLSMEGFLPH*APRGSG
Trigger: CCCTGACCCCCTCGGAGCCAAATGAGGCAGGAATCC...CTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000600059.5
ENST00000672160.1
ENST00000673139.1
3UTR-3UTR CAA 90 bp TCCACAGGCGCTCTGGGGTCAGGTAGTAGTCCTCCTTGTAGTTGCTGTGGGCCACTTCAGGTCCCCCAGTaGACAGAACTCCATAATCAG +
Preference number: 3 (lower is better)
Translates to: STGALGSGSSPPCSCCGPLQVPQ*TELHNQ
Trigger: CTGATTATGGAGTTCTGTCAACTGGGGGACCTGAAG...TGGCCCACAGCAACTACAAGGAGGACTACTACCTGACCCCAGAGCGCCTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGCGGCCGCAAGGAGGATaGGGGCGCCGGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRRPQGG*GRRGQA
Trigger: TGCCTGCCCCCGGCGCCCTCATCCTCCTTGCGGCCG...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGTGTCTCCGCCGGCCCTaGTGTCTGGGGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRCLRRP*CLGPRA
Trigger: AGCCCGGGGCCCCAGACAGCAGGGCCGGCGGAGACA...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGCGCCGCCCAGCGCAGTaGGATCCACAGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRRRPAQ*DPQALW
Trigger: CCAGAGCGCCTGTGGATCCCACTGCGCTGGGCGGCG...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGCAGCGGTGGCGGCGGTaGCTGCGGCCTCGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRQRWRR*LRPRVV
Trigger: GACAACACGAGGCCGCAGCCACCGCCGCCACCGCTG...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAGGTCCCCGTCTCCGCTaGGTGCCGTGTCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GQEWVRRDLRCVEGLQAQGPRLR*VPCLRR
Trigger: CCGGCGGAGACACGGCACTCAGCGGAGACGGGGACC...TTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CATGAAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTGGGGGGGAGGGAGGGGCTaGTTGCTGGCTCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: HEGPVELPEELGRRPAQWGGGRG*LLAQVP
Trigger: GGGTACCTGAGCCAGCAAGCAGCCCCTCCCTCCCCC...CCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp GTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGAGCCCGTCTCCGCTGAGTaGCGTGTCTCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: VRVPEACGPCLGPGVGEEPVSAE*RVSAGP
Trigger: AGGGCCGGCGGAGACACGGCACTCAGCGGAGACGGG...CTCCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACGCCGCCCAGCGCAGTaGGATCCACAGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPRRPAQ*DPQALW
Trigger: CCAGAGCGCCTGTGGATCCCACTGCGCTGGGCGGCG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGAGGGGACCCCGGCGGCTTaGGCCACCTCCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VRVPEACGPCLGPGVGEEGTPAA*ATSKAA
Trigger: AGCAGCCTTGGAGGTGGCCCAAGCCGCCGGGGTCCC...CTCCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACAGCGGTGGCGGCGGTaGCTGCGGCCTCGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPQRWRR*LRPRVV
Trigger: GACAACACGAGGCCGCAGCCACCGCCGCCACCGCTG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAACCGCGTAAGGCAGCTTaGGCCTCGGCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GQEWVRRDLRCVEGLQAQPRKAA*ASAGPA
Trigger: AGCTGGCCCGGCCGAGGCTCAAGCTGCCTTACGCGG...TTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGACAGGCACTCGAGGTTaGGGCCGCGGCTACTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRTGTRG*GRGYSR
Trigger: CCGAGAGTAGCCGCGGCCTCAACCTCGAGTGCCTGT...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCATCCTCTGCTCAGCCCCCAGCCATaGGGACCCGCGCGACCCTGG +
Preference number: 4 (lower is better)
Translates to: VVGMQVRQPAGDLQAHPLLSPQP*GPARPW
Trigger: CCAGGGTCGCGCGGGTCCCCATGGCTGGGGGCTGAG...CAGAGGATGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGCTGCGGGGCAGGCATTaGCAGGGAGACCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRLRGRH*QGDLSQ
Trigger: CTGGCTGAGGTCTCCCTGCCAATGCCTGCCCCGCAG...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACCCGATCGTGGGGGCTaGACCCCAACTCTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPPDRGG*TPTLGR
Trigger: ACGCCCGAGAGTTGGGGTCCAGCCCCCACGATCGGG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGTGTCTCCGCCGGCCCTaGTGTCTGGGGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKCLRRP*CLGPRA
Trigger: AGCCCGGGGCCCCAGACAGCAGGGCCGGCGGAGACA...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCATCCTCTGCAGCGTCCGCAGACCATGAAGGTCCCGTaGAGCTCCCCGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: QVRQPAGDLQAHPLQRPQTMKVP*SSPRSS
Trigger: CGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGT...CTGCGGACGCTGCAGAGGATGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACTGCGGTGGTGGCAGTaGCGCCGTCATCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPLRWWQ*RRHPQR
Trigger: CCTCTGTGGATGACGGCGCCACTGCCACCACCGCAG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CCGCGCTGGCTCGGAGCTCCTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGAGCGTGGAGAGCCGGGTaGCGCGGCGGAGTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: PRWLGAPSPPPGRGCSRRAWRAG*RGGVVN
Trigger: ATTGACCACTCCGCCGCGCCACCCGGCTCTCCACGC...TCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAGGAGCTCCGAGCCAGCGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp GTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGAGTGCCACGCGAAGGTTTaGACCAGAGGCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VRVPEACGPCLGPGVGEECHAKV*TRGPSR
Trigger: CCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCA...CTCCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCCCCAGAGGCGGCGTCTaGGGTGGTGGCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFPRGGV*GGGSGA
Trigger: GGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGG...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGTGGGAGGCTCAGGCTTaGGGCTTGTTTCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRWEAQA*GLFPVA
Trigger: GGCAACGGGAAACAAGCCCCAAGCCTGAGCCTCCCA...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGCCAAGGCCCAGTCTCTaGTGGCCTCTCCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRPRPSL*WPLRVP
Trigger: AGGAACACGGAGAGGCCACCAGAGACTGGGCCTTGG...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACTCCAGAGAGGTCTCTaGGGCTGGCTCCCCGATCGT +
Preference number: 4 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPLQRGL*GWLPDR
Trigger: ACGATCGGGGAGCCAGCCCCAGAGACCTCTCTGGAG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAACTGCGGTGGTGGCAGTaGCGCCGTCATCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: GQEWVRRDLRCVEGLQAQLRWWQ*RRHPQR
Trigger: CCTCTGTGGATGACGGCGCCACTGCCACCACCGCAG...TTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CCAGGCACTGGAGGACATTGGGGTGCTGCAGGCTCCTGTACGGCTGTGCTTCCGAGACGGACGGACGCGTaGAGAGCCGGGTGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PGTGGHWGAAGSCTAVLPRRTDA*RAGWRG
Trigger: GCCGCGCCACCCGGCTCTCCACGCGTCCGTCCGTCT...CGGAAGCACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp AGTAGTCCTCCTTGTAGTTGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGCGGCCGCAAGGAGGATaGGGGCGCCGGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPPCSCCGPARSLRCARRPQGG*GRRGQA
Trigger: TGCCTGCCCCCGGCGCCCTCATCCTCCTTGCGGCCG...CCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCAACTACAAGGAGGACTACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCCCGCGTAAGGCAGCTTaGGCCTCGGCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFPRKAA*ASAGPA
Trigger: AGCTGGCCCGGCCGAGGCTCAAGCTGCCTTACGCGG...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAGCAGCACGCTGGGCGTaGACAGCGCCTCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GQEWVRRDLRCVEGLQAQAARWA*TAPRRK
Trigger: CTTTCTACGAGGCGCTGTCCACGCCCAGCGTGCTGC...TTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGAGATGCCTGGGGCTCTCTaGTCCCCGTTCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VRVPEACGPCLGPGVGEEMPGAL*SPFSST
Trigger: AGTGCTGGAGAACGGGGACCAGAGAGCCCCAGGCAT...CTCCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGCCCGATCGTGGGGGCTaGACCCCAACTCTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKPDRGG*TPTLGR
Trigger: ACGCCCGAGAGTTGGGGTCCAGCCCCCACGATCGGG...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTGGCTCTCGGGGGCGCTaGCTCCAGCCTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSGSRGR*LQPPRL
Trigger: CAGCCGAGGAGGCTGGAGCCAGCGCCCCCGAGAGCC...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGTGTTCCGTGCTCACTTaGACCACGAAGGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRCSVLT*TTKVGF
Trigger: GAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACA...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGTACCCATCCGGCCTTTaGGTCCACGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKYPSGL*VHAASG
Trigger: CCCGGAAGCGGCGTGGACGCAAAGGCCGGATGGGTA...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTCCCGTCTCCGCTGAGTaGCGTGTCTCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSPVSAE*RVSAGP
Trigger: AGGGCCGGCGGAGACACGGCACTCAGCGGAGACGGG...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTCGGGTCCCCGAAGCCTaGGGCCCCTGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSRVPEA*GPCLGP
Trigger: TGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCG...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGGCCGCTGGGCTCGGAGGTAACGCTTCAGGTCCCCCAGTTGACAGAACTCCATCGCCGCCCAGCGCAGTaGGATCCACAGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPLGSEVTLQVPQLTELHRRPAQ*DPQALW
Trigger: CCAGAGCGCCTGTGGATCCCACTGCGCTGGGCGGCG...ATGGAGTTCTGTCAACTGGGGGACCTGAAGCGTTACCTCCGAGCCCAGCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTGAGGCTGAAGGGCGCTaGGCAGGTGGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSEAEGR*AGGRQQ
Trigger: CTGCTGGCGGCCACCTGCCCAGCGCCCTTCAGCCTC...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGAGGCTGAAGGGCGCTaGGCAGGTGGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSEAEGR*AGGRQQ
Trigger: CTGCTGGCGGCCACCTGCCCAGCGCCCTTCAGCCTC...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAAGGGGCGGGCACTCCTaGGTCCAGGGGGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSRGGHS*VQGVPV
Trigger: GACTGGGACCCCCTGGACCCAGGAGTGCCCGCCCCT...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CATGAAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGCGCAGTGGGGTTCTCAAATTCCTTaGAGCCGACATCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: HEGPVELPEELGRRPAQWGSQIP*SRHRPV
Trigger: AACGGGGCGATGTCGGCTTCAAGGAATTTGAGAACC...CCACTGCGCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGACGGCGACGAGAGGCCTaGACCGGGACTGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRRRREA*TGTGHG
Trigger: GCCGTGGCCAGTCCCGGTTCAGGCCTCTCGTCGCCG...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGGGCGCTGGAGGCGTTaGCGGGTCCGTGTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRGRWRR*RVRVPL
Trigger: GAGGGGGACACGGACCCGTCAACGCCTCCAGCGCCC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TTCCGAGATGAACTTGCGTTGCTCCAGGGGCCCCGCGCTGGCTCGGAGCTCCTTTTGTGGGAATGCAGGTaGGCCAGCCCGCGGGCGATC +
Preference number: 4 (lower is better)
Translates to: FRDELALLQGPRAGSELLLWECR*ASPRAI
Trigger: GATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAA...AAGGAGCTCCGAGCCAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp GCGGCGTCTGCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCTTGTGGGAATGCAGGTaGGCCAGCCCGCGGGCGATC +
Preference number: 4 (lower is better)
Translates to: AASAVVAVAPSSTEDSILLWECR*ASPRAI
Trigger: GATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAA...GAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTAGGCCCCCTCGCGGCTaGACAGGGGACAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVRPPRG*TGDRVG
Trigger: CCCTACCCTGTCCCCTGTGCAGCCGCGAGGGGGCCT...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTGTCTCCGCCGGCCCTaGTGTCTGGGGCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALCLRRP*CLGPRA
Trigger: AGCCCGGGGCCCCAGACAGCAGGGCCGGCGGAGACA...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCCGTCCGCGTCGGCGCTaGTCACCACGACGGGCACCG +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALRPRRR*SPRRAP
Trigger: CGGTGCCCGTCGTGGTGAGCAGCGCCGACGCGGACG...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGCGAATCCATCGGGGTaGGCCGGGGACGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSANPSG*AGDARQ
Trigger: CTGCCTGGCGTCCCCGGCCCACCCCGATGGATTCGC...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGCACGTAGTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCGGCACTGGAGGACATTaGGGTGCTGCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VHVVVGMQVRQPAGDLQAGTGGH*GAAGSC
Trigger: ACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCC...GGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAACTACGTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GTGCACGTAGTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCACAGACCCAGGCACTaGAGGACATTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHVVVGMQVRQPAGDLQAHRPRH*RTLGCC
Trigger: GCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTG...GGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAACTACGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGGCAGCACGCTGGGCGTaGACAGCGCCTCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKAARWA*TAPRRK
Trigger: CTTTCTACGAGGCGCTGTCCACGCCCAGCGTGCTGC...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCGGCGTCTGCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCGGGGGTCCCAGTCGTTaGGGAAGAGGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AASAVVAVAPSSTEDSILGGPSR*GRGAQE
Trigger: CTCCTGAGCCCCTCTTCCCCAACGACTGGGACCCCC...GAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCACCTGACGCTGAGGACTaGGCTGGGAAGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSPDAED*AGKGRG
Trigger: GCCCCGGCCCTTCCCAGCCCAGTCCTCAGCGTCAGG...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGAGTTTCTCCTCCCTCCTTaGGGGTGTCAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: VRVPEACGPCLGPGVGEEFLLPP*GCQLPI
Trigger: AATGGGGAGCTGACACCCCCAAGGAGGGAGGAGAAA...CTCCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGCTTCTCCCCGGCCTCTaGGGACCTCAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKLLPGL*GPQLPI
Trigger: AATGGGGAGCTGAGGTCCCCAGAGGCCGGGGAGAAG...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCACCCGATCGTGGGGGCTaGACCCCAACTCTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSPDRGG*TPTLGR
Trigger: ACGCCCGAGAGTTGGGGTCCAGCCCCCACGATCGGG...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTCCAGCGTCCCGTTCTTaGGGGCTGGGCCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AVVAVAPSSTEDSILNPSPASRS*GLGQGG
Trigger: GCCCCCTTGGCCCAGCCCCCAAGAACGGGACGCTGG...AGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGGCTCTCGGGGGCGCTaGCTCCAGCCTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGGSRGR*LQPPRL
Trigger: CAGCCGAGGAGGCTGGAGCCAGCGCCCCCGAGAGCC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCCTGCGGTGGTGGCAGTaGCGCCGTCATCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFLRWWQ*RRHPQR
Trigger: CCTCTGTGGATGACGGCGCCACTGCCACCACCGCAG...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
3UTR CAA 72 bp GCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTaGCTCCAGGGGCCCCGCGCTGGCTCGGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: APVRLCFRDELA*LQGPRAGSELL
Trigger: AAGGAGCTCCGAGCCAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp TCTCCAGGCCCATCCTCTGCAGCGTCCGCAGGTCTCGAGGGGGTAGCTCAGGGGGCTGTGCTTCCGAGATaGACTTGCGTTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPGPSSAASAGLEGVAQGAVLPR*TCVAPG
Trigger: CCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGC...CCCCTGAGCTACCCCCTCGAGACCTGCGGACGCTGCAGAGGATGGGCCTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp CAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGCGGCGACGAGAGGCCTaGACCGGGACTGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: QKSSVQFRERRLSMEGRGRRREA*TGTGHG
Trigger: GCCGTGGCCAGTCCCGGTTCAGGCCTCTCGTCGCCG...CCCCCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGGGTCCCCGTCTCCGCTaGGTGCCGTGTCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RCVEGLQAQKSSVQFRERGPRLR*VPCLRR
Trigger: CCGGCGGAGACACGGCACTCAGCGGAGACGGGGACC...CCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGGTCCCCGTCTCCGCTaGGTGCCGTGTCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKAGPRLR*VPCLRR
Trigger: CCGGCGGAGACACGGCACTCAGCGGAGACGGGGACC...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGCACGTAGTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCAGGACATTGGGGTGCTaGAGGCTCCTGTACGGCTGT +
Preference number: 4 (lower is better)
Translates to: VHVVVGMQVRQPAGDLQARTLGC*RLLYGC
Trigger: ACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCT...GGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAACTACGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp TGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGTCAGGTCAGAGGTCAGCATCCAGGCCCATCCTCTaGAGCGTCCGCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: CCGPARSLRCARSGQRSASRPIL*SVRRSR
Trigger: TCGAGACCTGCGGACGCTGCAGAGGATGGGCCTGGA...TGCTGACCTCTGACCTGACCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGGCCACCTCCAAGGCTaGTGCTGTCTTCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSGHLQG*CCLPLG
Trigger: CCCCAGGGGAAGACAGCAGCAGCCTTGGAGGTGGCC...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTGGCCACCTCCAAGGCTaGTGCTGTCTTCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSGHLQG*CCLPLG
Trigger: CCCCAGGGGAAGACAGCAGCAGCCTTGGAGGTGGCC...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCACCGCCTTCTCCTCGATaGCTGGGGCTCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSPPSPR*LGLSGP
Trigger: GGGACCAGAGAGCCCCAGGCATCGAGGAGAAGGCGG...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGCGTCCGCGTCGGCGCTaGTCACCACGACGGGCACCG +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQRPRRR*SPRRAP
Trigger: CGGTGCCCGTCGTGGTGAGCAGCGCCGACGCGGACG...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAACCCAGAGGCGGCGTCTaGGGTGGTGGCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LRCVEGLQAQKSSVQFREPRGGV*GGGSGA
Trigger: GGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGG...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGCCCAGAGGCGGCGTCTaGGGTGGTGGCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GPKEFSSVPRKAALYGGAPRGGV*GGGSGA
Trigger: GGCGCCACTGCCACCACCGCAGACGCCGCCTCTGGG...CGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCCGGGTCCCCGAAGCCTaGGGCCCCTGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGRVPEA*GPCLGP
Trigger: TGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCG...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCATCCTCTGGCATCTTGTCGAGGATaGCAGGGAGGTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VVGMQVRQPAGDLQAHPLASCRG*QGGGGG
Trigger: ACCACCTCCACCTCCCTGCCATCCTCGACAAGATGC...CAGAGGATGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGGGCGCTGGGCAGGTaGCCGCCAGCAGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPRALGR*PPAGLK
Trigger: CTTCAGTCCTGCTGGCGGCCACCTGCCCAGCGCCCT...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGTCTCGGACACCAGCTaGGGGACCTCGGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGVSDTS*GTSEGA
Trigger: GGCCCCCTCCGAGGTCCCCCAGCTGGTGTCCGAGAC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGTGGGAGGCTCAGGCTTaGGGCTTGTTTCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKWEAQA*GLFPVA
Trigger: GGCAACGGGAAACAAGCCCCAAGCCTGAGCCTCCCA...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGGGCTCTCGGGGGCGCTaGCTCCAGCCTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRGSRGR*LQPPRL
Trigger: CAGCCGAGGAGGCTGGAGCCAGCGCCCCCGAGAGCC...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGGCGGCGTCTGCGGTaGTGGCAGTGGCGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPRRRLR*WQWRRH
Trigger: ATGACGGCGCCACTGCCACCACCGCAGACGCCGCCT...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
3UTR CAA 72 bp AGCGTCTCCACGCACAGACCCAGGCACTGGAGGACATaGGGGTGCTGCAGGCTCCTGTACGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SVSTHRPRHWRT*GCCRLLYGCAS
Trigger: GGAAGCACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTGCGTGGAGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp CTCCACGCACAGACCCAGGCACTGGAGGACATTGGGGTGCTGCAGGCTCCTGTAGGCCGGAGCAGGAAATaGGGACCACAGCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LHAQTQALEDIGVLQAPVGRSRK*GPQRRE
Trigger: CTCCCTACGCTGTGGTCCTCATTTCCTGCTCCGGCC...TACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTGCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGACAGGCACTCGAGGTTaGGGCCGCGGCTACTCTCGG +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPTGTRG*GRGYSR
Trigger: CCGAGAGTAGCCGCGGCCTCAACCTCGAGTGCCTGT...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCGGGAGAGCCTGGCTTTaGTCTGCTCGCTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFGRAWL*SARCSP
Trigger: AGGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCC...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTAGGGCGCTGGAGGCGTTaGCGGGTCCGTGTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLGRWRR*RVRVPL
Trigger: GAGGGGGACACGGACCCGTCAACGCCTCCAGCGCCC...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GCTGGCTCGGAGCTCCTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGAAAATGCCCGTAGTCTCCGATaGGCACGGTCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGSELLHHHLGGGVVGENARSLR*ARSGQR
Trigger: CCTCTGACCTGACCGTGCGCATCGGAGACTACGGGC...ATTTTCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAGGAGCTCCGAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAACAGGGAGCCCCGCTCTaGCCGCAGCGAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LRCVEGLQAQKSSVQFREQGAPL*PQRGVV
Trigger: GACGACTCCTCGCTGCGGGCAGAGCGGGGCTCCCTG...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCAGGGAGCCCCGCTCTaGCCGCAGCGAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSQGAPL*PQRGVV
Trigger: GACGACTCCTCGCTGCGGGCAGAGCGGGGCTCCCTG...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAATCAGCAGCTGTTCCGTaGTCACTTGAACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: GQEWVRRDLRCVEGLQAQSAAVP*SLEPRR
Trigger: CCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGA...TTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCACCGCCTTCTCCTCGATaGCTGGGGCTCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSPPSPR*LGLSGP
Trigger: GGGACCAGAGAGCCCCAGGCATCGAGGAGAAGGCGG...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCCCGTCTCCGCTGAGTaGCGTGTCTCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSPVSAE*RVSAGP
Trigger: AGGGCCGGCGGAGACACGGCACTCAGCGGAGACGGG...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTACGTCCGCGTCGGCGCTaGTCACCACGACGGGCACCG +
Preference number: 4 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLRPRRR*SPRRAP
Trigger: CGGTGCCCGTCGTGGTGAGCAGCGCCGACGCGGACG...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGGGAAGGAGACCATCTTaGGCTTCCTCTCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKGRRPS*ASSPAR
Trigger: GCGAGCTGGAGAGGAAGCGCAAGATGGTCTCCTTCC...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTAGGGGCGGGCACTCCTaGGTCCAGGGGGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSRGGHS*VQGVPV
Trigger: GACTGGGACCCCCTGGACCCAGGAGTGCCCGCCCCT...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGGTCTCGGACACCAGCTaGGGGACCTCGGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQVSDTS*GTSEGA
Trigger: GGCCCCCTCCGAGGTCCCCCAGCTGGTGTCCGAGAC...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGTGGGAAGGCTCCCTCTaGGGAAAAAGGGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKWEGSL*GKRGLG
Trigger: ACCGAGACCCCTTTTTCCCCAGAGGGAGCCTTCCCA...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTGTCACCCCGTTCACTaGGAGGCTCAGGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSCHPVH*EAQAWG
Trigger: GCCCCAAGCCTGAGCCTCCCAGTGAACGGGGTGACA...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCGGCGTCTGCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCCCAAGGCCCAGTCTCTaGTGGCCTCTCCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AASAVVAVAPSSTEDSILPRPSL*WPLRVP
Trigger: AGGAACACGGAGAGGCCACCAGAGACTGGGCCTTGG...GAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCCAGCGTCCCGTTCTTaGGGGCTGGGCCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RCVEGLQAQKSSVQFRERPASRS*GLGQGG
Trigger: GCCCCCTTGGCCCAGCCCCCAAGAACGGGACGCTGG...CCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGCAGCGGTGGCGGCGGTaGCTGCGGCCTCGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQQRWRR*LRPRVV
Trigger: GACAACACGAGGCCGCAGCCACCGCCGCCACCGCTG...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGGCTCAGCTCGTTGGTTaGCGTCTCCTGGTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKAQLVG*RLLVEE
Trigger: CTCTTCGACCAGGAGACGCCAACCAACGAGCTGAGC...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCGGACGCTCAGCTCGTTaGTTGGCGTCTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFGRSAR*LASPGR
Trigger: TCGACCAGGAGACGCCAACCAACGAGCTGAGCGTCC...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CTTGTAGTTGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGTCAGGTCAGATCTGGTCCACCACCATaGAGGTCCCGTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LVVAVGQPVVSDAHGQVRSGPPP*RSRGAP
Trigger: GGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGA...TCTGACCTGACCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCAACTACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCGAGGACCTCCTCGTCTaGCAGGTGGCGGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALEDLLV*QVAVGL
Trigger: CAGCCCTACCGCCACCTGTCAGACGAGGAGGTCCTC...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGCGCTGGAGGCGTTaGCGGGTCCGTGTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGGRWRR*RVRVPL
Trigger: GAGGGGGACACGGACCCGTCAACGCCTCCAGCGCCC...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGAGATGAACTTGCGTTaGTCCAGGGGCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSEMNLR*SRGPAL
Trigger: CAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTC...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp CCTTGTAGTTGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGTCAGGTCAGTGGAGGACATTGGGGTaGTGCAGGCTCCTGTACGGC +
Preference number: 4 (lower is better)
Translates to: PCSCCGPARSLRCARSGQWRTLG*CRLLYG
Trigger: GCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCA...CTGACCTGACCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCAACTACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTGGAGGACATTGGGGTaGTGCAGGCTCCTGTACGGC +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSWRTLG*CRLLYG
Trigger: GCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCA...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp GCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTGGATGTAGTACTCGCTaGTCACGGAGGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AVVAVAPSSTEDSILNPSGCSTR*SRRGCG
Trigger: CCCGCAGCCCCTCCGTGAGCAGCGAGTACTACATCC...AGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGCCCCCTCGCGGCTaGACAGGGGACAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWRPPRG*TGDRVG
Trigger: CCCTACCCTGTCCCCTGTGCAGCCGCGAGGGGGCCT...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGGGCTTGTTTCCCGTTaGCCAGGACTGTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSGLVSR*PGLSGP
Trigger: GGGACCCGACAGTCCTGGGCAACGGGAAACAAGCCC...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCGGAAGGAGACCATCTTaGGCTTCCTCTCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFGRRPS*ASSPAR
Trigger: GCGAGCTGGAGAGGAAGCGCAAGATGGTCTCCTTCC...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGCGGGTCCCCGAAGCCTaGGGCCCCTGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWRVPEA*GPCLGP
Trigger: TGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCG...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGTAGTCGGAGAAAATCTCTCCCAGGATCACGGGCCCAGAATCCGATGGACGCAGCGAATCCATCGGGGTaGGCCGGGGACGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSRRKSLPGSRAQNPMDAANPSG*AGDARQ
Trigger: CTGCCTGGCGTCCCCGGCCCACCCCGATGGATTCGC...TGCGTCCATCGGATTCTGGGCCCGTGATCCTGGGAGAGATTTTCTCCGACTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTTGCTCCAGGGGCCCCGCGATCCACAGGCGCTCTaGGGTCAGGTAGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: APVRLCFRDELALLQGPRDPQAL*GQVVVL
Trigger: GAGGACTACTACCTGACCCCAGAGCGCCTGTGGATC...GCGGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAACCATGAAGGTCCCGTaGAGCTCCCCGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSTMKVP*SSPRSS
Trigger: CGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGT...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGCCTGACGCTGAGGACTaGGCTGGGAAGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWPDAED*AGKGRG
Trigger: GCCCCGGCCCTTCCCAGCCCAGTCCTCAGCGTCAGG...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCCAGCCAAGAGCAGGGTaGCCTCCCCAGCCTGCTACG +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALQPRAG*PPQPAT
Trigger: CGTAGCAGGCTGGGGAGGCCACCCTGCTCTTGGCTG...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTCTTCTCCTCGATGCCTaGGGCTCTCTGGTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSLLLDA*GSLVPV
Trigger: AACGGGGACCAGAGAGCCCCAGGCATCGAGGAGAAG...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGTTTCTCCTCCCTCCTTaGGGGTGTCAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKFLLPP*GCQLPI
Trigger: AATGGGGAGCTGACACCCCCAAGGAGGGAGGAGAAA...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCACTTCTCCCCGGCCTCTaGGGACCTCAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSLLPGL*GPQLPI
Trigger: AATGGGGAGCTGAGGTCCCCAGAGGCCGGGGAGAAG...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGGCCCAGTCTCTGGTaGCCTCTCCGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPRPSLW*PLRVPG
Trigger: CCCAGGAACACGGAGAGGCCACCAGAGACTGGGCCT...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTAGCCGCTGTCGTTGCTaGGAAACCCATCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVSRCRC*ETHLRG
Trigger: CCCCCGGAGATGGGTTTCCCAGCAACGACAGCGGCT...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGCGGCGTCTGCGGTGGTaGCAGTGGCGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: AQKSSVQFRERRLSMEGRRRLRW*QWRRHP
Trigger: TGGATGACGGCGCCACTGCCACCACCGCAGACGCCG...CCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGCGGCGTCTGCGGTGGTaGCAGTGGCGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKARRLRW*QWRRHP
Trigger: TGGATGACGGCGCCACTGCCACCACCGCAGACGCCG...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGAAAATCTCTCCCAGGATCACATCAGGCAGCGACTGTaGGGAGGAGGTCTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LHHHLGGGVVGENLSQDHIRQRL*GGGLLR
Trigger: GCGGAGGAGACCTCCTCCTCACAGTCGCTGCCTGAT...GTGATCCTGGGAGAGATTTTCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTGGTCCACCACCATaGAGGTCCCGTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGSGPPP*RSRGAP
Trigger: GGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGA...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TCCACAGGCGCTCTGGGGTCAGGTAGTAGTCCTCCTTGTAGTTGCTGTGGGCCAGAGATGAACTTGCGTTaGTCCAGGGGCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: STGALGSGSSPPCSCCGPEMNLR*SRGPAL
Trigger: CAGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTC...TGGCCCACAGCAACTACAAGGAGGACTACTACCTGACCCCAGAGCGCCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTCCAGGCCCATCCTCTaGAGCGTCCGCAGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALSRPIL*SVRRSR
Trigger: TCGAGACCTGCGGACGCTGCAGAGGATGGGCCTGGA...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGCCCGTAGTCTCCGATaGGCACGGTCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRARSLR*ARSGQR
Trigger: CCTCTGACCTGACCGTGCGCATCGGAGACTACGGGC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGCCAGGGACCAGATGTTaGTCTCGCGGCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPPGTRC*SRGSGP
Trigger: TGGACCAGAGCCGCGAGAGCAACATCTGGTCCCTGG...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGCCAGCTTCACATGCTaGTGGCGGACCACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGASFTC*WRTTKA
Trigger: CGCCTTCGTGGTCCGCCAGCAGCATGTGAAGCTGGC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGGATGTAGTACTCGCTaGTCACGGAGGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRGCSTR*SRRGCG
Trigger: CCCGCAGCCCCTCCGTGAGCAGCGAGTACTACATCC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCGGGCTTGTTTCCCGTTaGCCAGGACTGTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFGLVSR*PGLSGP
Trigger: GGGACCCGACAGTCCTGGGCAACGGGAAACAAGCCC...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAATACCCATCCGGCCTTTaGGTCCACGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LRCVEGLQAQKSSVQFREYPSGL*VHAASG
Trigger: CCCGGAAGCGGCGTGGACGCAAAGGCCGGATGGGTA...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp CGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGTACCCATCCGGCCTTTaGGTCCACGCCGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RCVEGLQAQKSSVQFRERYPSGL*VHAASG
Trigger: CCCGGAAGCGGCGTGGACGCAAAGGCCGGATGGGTA...CCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTTGCTCTCGCGGCTCTaGTCCACCACCATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSLLSRL*STTMKV
Trigger: GACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAA...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGGGTCCCAGTCGTTaGGGAAGAGGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AQKSSVQFRERRLSMEGRGGPSR*GRGAQE
Trigger: CTCCTGAGCCCCTCTTCCCCAACGACTGGGACCCCC...CCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGACCCCGGCGGCTTaGGCCACCTCCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQAQKSSVQFRERRLSMEGTPAA*ATSKAA
Trigger: AGCAGCCTTGGAGGTGGCCCAAGCCGCCGGGGTCCC...CTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCATGGGAGGCTCAGGCTTaGGGCTTGTTTCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSWEAQA*GLFPVA
Trigger: GGCAACGGGAAACAAGCCCCAAGCCTGAGCCTCCCA...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGATGTCACCCCGTTCACTaGGAGGCTCAGGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRCHPVH*EAQAWG
Trigger: GCCCCAAGCCTGAGCCTCCCAGTGAACGGGGTGACA...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTATGCCTGGGGCTCTCTaGTCCCCGTTCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVMPGAL*SPFSST
Trigger: AGTGCTGGAGAACGGGGACCAGAGAGCCCCAGGCAT...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGCTTCTCCTCGATGCCTaGGGCTCTCTGGTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPLLLDA*GSLVPV
Trigger: AACGGGGACCAGAGAGCCCCAGGCATCGAGGAGAAG...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCAGGCCCAGTCTCTGGTaGCCTCTCCGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALRPSLW*PLRVPG
Trigger: CCCAGGAACACGGAGAGGCCACCAGAGACTGGGCCT...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCCAAGGCCCAGTCTCTaGTGGCCTCTCCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVPRPSL*WPLRVP
Trigger: AGGAACACGGAGAGGCCACCAGAGACTGGGCCTTGG...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGACTCCAGAGAGGTCTCTaGGGCTGGCTCCCCGATCGT +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRLQRGL*GWLPDR
Trigger: ACGATCGGGGAGCCAGCCCCAGAGACCTCTCTGGAG...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCAGCCGCTGTCGTTGCTaGGAAACCCATCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFSRCRC*ETHLRG
Trigger: CCCCCGGAGATGGGTTTCCCAGCAACGACAGCGGCT...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAAGCCGCTGTCGTTGCTaGGAAACCCATCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRSRCRC*ETHLRG
Trigger: CCCCCGGAGATGGGTTTCCCAGCAACGACAGCGGCT...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCCGGGGCCTCCCGTTTaGCACATGGTAGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSPGPPV*HMVGEW
Trigger: CCACTCCCCTACCATGTGCCAAACGGGAGGCCCCGG...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGCCGGGGCCTCCCGTTTaGCACATGGTAGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GPKEFSSVPRKAALYGGAPGPPV*HMVGEW
Trigger: CCACTCCCCTACCATGTGCCAAACGGGAGGCCCCGG...CGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGGATTCCTGCCTCATTTaGCTCCGAGGGGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPDSCLI*LRGGQG
Trigger: CCCCTGACCCCCTCGGAGCCAAATGAGGCAGGAATC...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGGGGAGGTGGAGGTGGTaGCGGGTTTCCCGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQGRWRW*RVSRAV
Trigger: AACCGCACGGGAAACCCGCCACCACCTCCACCTCCC...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR TCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTGGCCGGAGCAGGAAATaGGGACCACAGCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSGRSRK*GPQRRE
Trigger: CTCCCTACGCTGTGGTCCTCATTTCCTGCTCCGGCC...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR TCA 90 bp GCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGATCAGGCAGCGACTGTaGGGAGGAGGTCTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AQKSSVQFRERRLSMEGRIRQRL*GGGLLR
Trigger: GCGGAGGAGACCTCCTCCTCACAGTCGCTGCCTGAT...CCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR TCA 90 bp GCGTCTCCACGCACAGACCCAGGCACTGGAGGACATTGGGGTGCTGCAGGCTCCTTCAGGTCCCCCAGTTaGCAGAACTCCATAATCAGC +
Preference number: 4 (lower is better)
Translates to: ASPRTDPGTGGHWGAAGSFRSPS*QNSIIS
Trigger: GCTGATTATGGAGTTCTGTCAACTGGGGGACCTGAA...GGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTGCGTGGAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR TCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTAGAGGACCTCCTCGTCTaGCAGGTGGCGGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLEDLLV*QVAVGL
Trigger: CAGCCCTACCGCCACCTGTCAGACGAGGAGGTCCTC...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GCGGCGTCTGCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCCGGAGAGCAAGTAGGTaGGCTGCAATTGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: AASAVVAVAPSSTEDSILRRASR*AAIGDQ
Trigger: CTGATCTCCAATTGCAGCTCACCTACTTGCTCTCCG...GAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGGGAGAGCCTGGCTTTaGTCTGCTCGCTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRGRAWL*SARCSP
Trigger: AGGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGTGCCACGCGAAGGTTTaGACCAGAGGCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QKSSVQFRERRLSMEGRGCHAKV*TRGPSR
Trigger: CCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCA...CCCCCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GCTGGCTCGGAGCTCCTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGAAAATGCTCCTGTACGGCTGTaGTTCCGAGATGAACTTGCG +
Preference number: 4 (lower is better)
Translates to: AGSELLHHHLGGGVVGENAPVRL*FRDELA
Trigger: CGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGC...ATTTTCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAGGAGCTCCGAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAGCCCGTAGTCTCCGATaGGCACGGTCAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRCVEGLQAQKSSVQFREARSLR*ARSGQR
Trigger: CCTCTGACCTGACCGTGCGCATCGGAGACTACGGGC...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp AGACCCAGGCACTGGAGGACATTGGGGTGCTGCAGGCTCCTGTACGGCTGTGCTAGTCCTCCTTGTAGTTaGTGTGGGCCAGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: RPRHWRTLGCCRLLYGCASPPCS*CGPARS
Trigger: ACTACGGGCTGGCCCACAGCAACTACAAGGAGGACT...AGCACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR GCA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAAGTCCTCCTTGTAGTTaGTGTGGGCCAGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSSPPCS*CGPARS
Trigger: ACTACGGGCTGGCCCACAGCAACTACAAGGAGGACT...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGGCCAGCTTCACATGCTaGTGGCGGACCACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQASFTC*WRTTKA
Trigger: CGCCTTCGTGGTCCGCCAGCAGCATGTGAAGCTGGC...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGCGCTCAGCAGGAAGCTaGCTGACGCTGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: AQKSSVQFRERRLSMEGRRSAGS*LTLRTG
Trigger: CCCAGTCCTCAGCGTCAGGCAGCTTCCTGCTGAGCG...CCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCGCTCAGCAGGAAGCTaGCTGACGCTGAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSRSAGS*LTLRTG
Trigger: CCCAGTCCTCAGCGTCAGGCAGCTTCCTGCTGAGCG...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGGGGCTTGTTTCCCGTTaGCCAGGACTGTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQGLVSR*PGLSGP
Trigger: GGGACCCGACAGTCCTGGGCAACGGGAAACAAGCCC...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTGGAAGGAGACCATCTTaGGCTTCCTCTCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVGRRPS*ASSPAR
Trigger: GCGAGCTGGAGAGGAAGCGCAAGATGGTCTCCTTCC...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CCCCAGTTGACAGAACTCCATAATCAGCAGAAACGGCAGCGTCTCCACGCACAGCTGCGGGGCAGGCATTaGCAGGGAGACCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQLTELHNQQKRQRLHAQLRGRH*QGDLSQ
Trigger: CTGGCTGAGGTCTCCCTGCCAATGCCTGCCCCGCAG...CTGTGCGTGGAGACGCTGCCGTTTCTGCTGATTATGGAGTTCTGTCAACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp TGCAGGCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTTGCTCCAGGGGCTTGCTCTCGCGGCTCTaGTCCACCACCATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CRLLYGCASEMNLRCSRGLLSRL*STTMKV
Trigger: GACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAA...GCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAAGCTTCACATGCTGCTaGCGGACCACGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRSFTCC*RTTKAR
Trigger: CCTCGCCTTCGTGGTCCGCCAGCAGCATGTGAAGCT...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGTGTCACCCCGTTCACTaGGAGGCTCAGGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRCHPVH*EAQAWG
Trigger: GCCCCAAGCCTGAGCCTCCCAGTGAACGGGGTGACA...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCCTTCTCCTCGATGCCTaGGGCTCTCTGGTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGLLLDA*GSLVPV
Trigger: AACGGGGACCAGAGAGCCCCAGGCATCGAGGAGAAG...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGCTTCTCCCCGGCCTCTaGGGACCTCAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQLLPGL*GPQLPI
Trigger: AATGGGGAGCTGAGGTCCCCAGAGGCCGGGGAGAAG...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGCTTGTCCTCGCTCTTTaGGGGTGTCAGGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPLVLAL*GCQAPI
Trigger: AATGGGGGCCTGACACCCCCAAAGAGCGAGGACAAG...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGCCTCTCCGTGTTCCTaGGGAATCTCAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRASPCS*GISGPH
Trigger: ATGGGGGCCTGAGATTCCCCAGGAACACGGAGAGGC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGCCTCTCCGTGTTCCTaGGGAATCTCAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGASPCS*GISGPH
Trigger: ATGGGGGCCTGAGATTCCCCAGGAACACGGAGAGGC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCACGGTCACGTCCCCGTaGAAGGAGACCATCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALTVTSP*KETILR
Trigger: GCGCAAGATGGTCTCCTTCCACGGGGACGTGACCGT...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCACGGTCACGTCCCCGTaGAAGGAGACCATCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFTVTSP*KETILR
Trigger: GCGCAAGATGGTCTCCTTCCACGGGGACGTGACCGT...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAAGGCGGCGTCTGCGGTaGTGGCAGTGGCGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGRRRLR*WQWRRH
Trigger: ATGACGGCGCCACTGCCACCACCGCAGACGCCGCCT...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGAGGCGGCGTCTGCGGTaGTGGCAGTGGCGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LQAQKSSVQFRERRLSMERRRLR*WQWRRH
Trigger: ATGACGGCGCCACTGCCACCACCGCAGACGCCGCCT...CTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATCTGGTCCACCACCATaGAGGTCCCGTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLSGPPP*RSRGAP
Trigger: GGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGA...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGCCAGGGACCAGATGTTaGTCTCGCGGCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPKEFSSVPRKAALYGGAPGTRC*SRGSGP
Trigger: TGGACCAGAGCCGCGAGAGCAACATCTGGTCCCTGG...CGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGACCGCCTTCTCCTCGATaGCTGGGGCTCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGPPSPR*LGLSGP
Trigger: GGGACCAGAGAGCCCCAGGCATCGAGGAGAAGGCGG...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGCATCTTGTCGAGGATaGCAGGGAGGTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRASCRG*QGGGGG
Trigger: ACCACCTCCACCTCCCTGCCATCCTCGACAAGATGC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CCA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGCACAGACCCAGGCACTaGAGGACATTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKAHRPRH*RTLGCC
Trigger: GCAGCACCCCAATGTCCTCCAGTGCCTGGGTCTGTG...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CCA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCGATCCACAGGCGCTCTaGGGTCAGGTAGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFDPQAL*GQVVVL
Trigger: GAGGACTACTACCTGACCCCAGAGCGCCTGTGGATC...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGATGCCTGGGGCTCTCTaGTCCCCGTTCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GPKEFSSVPRKAALYGGAMPGAL*SPFSST
Trigger: AGTGCTGGAGAACGGGGACCAGAGAGCCCCAGGCAT...CGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCCTCTCCGTGTTCCTaGGGAATCTCAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKAASPCS*GISGPH
Trigger: ATGGGGGCCTGAGATTCCCCAGGAACACGGAGAGGC...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGCTCCAGAGAGGTCTCTaGGGCTGGCTCCCCGATCGT +
Preference number: 4 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWLQRGL*GWLPDR
Trigger: ACGATCGGGGAGCCAGCCCCAGAGACCTCTCTGGAG...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTACGGTCACGTCCCCGTaGAAGGAGACCATCTTGCGC +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSTVTSP*KETILR
Trigger: GCGCAAGATGGTCTCCTTCCACGGGGACGTGACCGT...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCGCTCAGCTCGTTGGTTaGCGTCTCCTGGTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFAQLVG*RLLVEE
Trigger: CTCTTCGACCAGGAGACGCCAACCAACGAGCTGAGC...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGCTCAGCTCGTTGGTTaGCGTCTCCTGGTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: DLRCVEGLQAQKSSVQFRAQLVG*RLLVEE
Trigger: CTCTTCGACCAGGAGACGCCAACCAACGAGCTGAGC...TCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGGGACGCTCAGCTCGTTaGTTGGCGTCTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQGRSAR*LASPGR
Trigger: TCGACCAGGAGACGCCAACCAACGAGCTGAGCGTCC...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGACCGGGGCCTCCCGTTTaGCACATGGTAGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGPGPPV*HMVGEW
Trigger: CCACTCCCCTACCATGTGCCAAACGGGAGGCCCCGG...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGATTCCTGCCTCATTTaGCTCCGAGGGGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQKSSVQFRERRLSMEGRDSCLI*LRGGQG
Trigger: CCCCTGACCCCCTCGGAGCCAAATGAGGCAGGAATC...CCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTAGGGCCAGGTCGCCCTaGTTCCTCCAAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSRARSP*FLQVSS
Trigger: AGAGGAGACTTGGAGGAACCAGGGCGACCTGGCCCT...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672160.1
CDS-3UTR TCA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTGGTTCTCAAATTCCTTaGAGCCGACATCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVGSQIP*SRHRPV
Trigger: AACGGGGCGATGTCGGCTTCAAGGAATTTGAGAACC...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR TCA 90 bp GCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGCTGTGCTTCCGAGATaGACTTGCGTTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AQKSSVQFRERRLSMEGRAVLPR*TCVAPG
Trigger: CCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGC...CCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGCAAAGCCGCTGTCGTTaGTGGGAAACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQQSRCR*WETHLR
Trigger: CCGGAGATGGGTTTCCCAGCAACGACAGCGGCTTTG...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCGTGGCGGGTTTCCCGTaGGGTTACGCAGACATTACA +
Preference number: 4 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFVAGFP*GYADIT
Trigger: TGTAATGTCTGCGTAACCGCACGGGAAACCCGCCAC...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGGATCCACAGGCGCTCTaGGGTCAGGTAGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQDPQAL*GQVVVL
Trigger: GAGGACTACTACCTGACCCCAGAGCGCCTGTGGATC...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAACCATGAAGGTCCCGTaGAGCTCCCCGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGTMKVP*SSPRSS
Trigger: CGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGT...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTTCTGAGGGTGCAGTTGCTCTCGCGGCTCTaGTCCACCACCATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WRRHPQRIPFSTPLLRVQLLSRL*STTMKV
Trigger: GACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAA...CTGCACCCTCAGAAGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGCTTCACATGCTGCTaGCGGACCACGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWSFTCC*RTTKAR
Trigger: CCTCGCCTTCGTGGTCCGCCAGCAGCATGTGAAGCT...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TTAAATAATGTGAAAATGCCACGCGAAGGTTTGAACCAGAGGCCCCTCCAGGGGAGGGCGCTGGGCAGGTaGCCGCCAGCAGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: LNNVKMPREGLNQRPLQGRALGR*PPAGLK
Trigger: CTTCAGTCCTGCTGGCGGCCACCTGCCCAGCGCCCT...CCCCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCATTTTCACATTATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCTTGTCCTCGCTCTTTaGGGGTGTCAGGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: RCVEGLQAQKSSVQFRERLVLAL*GCQAPI
Trigger: AATGGGGGCCTGACACCCCCAAAGAGCGAGGACAAG...CCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGCTTGTCCTCGCTCTTTaGGGGTGTCAGGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKALVLAL*GCQAPI
Trigger: AATGGGGGCCTGACACCCCCAAAGAGCGAGGACAAG...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTAGGACGCTCAGCTCGTTaGTTGGCGTCTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLGRSAR*LASPGR
Trigger: TCGACCAGGAGACGCCAACCAACGAGCTGAGCGTCC...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TTAAATAATGTGAAAATGCCACGCGAAGGTTTGAACCAGAGGCCCCTCCAGGGGCGGCGTCTGCGGTGGTaGCAGTGGCGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: LNNVKMPREGLNQRPLQGRRLRW*QWRRHP
Trigger: TGGATGACGGCGCCACTGCCACCACCGCAGACGCCG...CCCCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCATTTTCACATTATTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp CAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGTGTTCCGTGCTCACTTaGACCACGAAGGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QKSSVQFRERRLSMEGRGCSVLT*TTKVGF
Trigger: GAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACA...CCCCCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGAGAGCCTGGCTTTaGTCTGCTCGCTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGGRAWL*SARCSP
Trigger: AGGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCC...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp TCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTGCTCCTGTACGGCTGTaGTTCCGAGATGAACTTGCG +
Preference number: 4 (lower is better)
Translates to: SRGSRPKRVQFSSEKGGSAPVRL*FRDELA
Trigger: CGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGC...AGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp CGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGAGTCCTCCTTGTAGTTaGTGTGGGCCAGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: RCVEGLQAQKSSVQFRERSPPCS*CGPARS
Trigger: ACTACGGGCTGGCCCACAGCAACTACAAGGAGGACT...CCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp AGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTACAAAGCCGCTGTCGTTaGTGGGAAACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: RGSRPKRVQFSSEKGGSLQSRCR*WETHLR
Trigger: CCGGAGATGGGTTTCCCAGCAACGACAGCGGCTTTG...TAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGCACTGGAGGACATTaGGGTGCTGCAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LQAQKSSVQFRERRLSMEGTGGH*GAAGSC
Trigger: ACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCC...CTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CCA 90 bp TTAAATAATGTGAAAATGCCACGCGAAGGTTTGAACCAGAGGCCCCTCCAGGGGCAGCCAAGAGCAGGGTaGCCTCCCCAGCCTGCTACG +
Preference number: 4 (lower is better)
Translates to: LNNVKMPREGLNQRPLQGQPRAG*PPQPAT
Trigger: CGTAGCAGGCTGGGGAGGCCACCCTGCTCTTGGCTG...CCCCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCATTTTCACATTATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGTTTCTCCTCCCTCCTTaGGGGTGTCAGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKAFLLPP*GCQLPI
Trigger: AATGGGGAGCTGACACCCCCAAGGAGGGAGGAGAAA...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp TTAAATAATGTGAAAATGCCACGCGAAGGTTTGAACCAGAGGCCCCTCCAGGGGTGCCACGCGAAGGTTTaGACCAGAGGCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LNNVKMPREGLNQRPLQGCHAKV*TRGPSR
Trigger: CCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCA...CCCCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCATTTTCACATTATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR GCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAAGGACATTGGGGTGCTaGAGGCTCCTGTACGGCTGT +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGRTLGC*RLLYGC
Trigger: ACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCT...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGACAAAGCCGCTGTCGTTaGTGGGAAACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGQSRCR*WETHLR
Trigger: CCGGAGATGGGTTTCCCAGCAACGACAGCGGCTTTG...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAATGCGAGGCGTTCCCCTaGGTGAGGCTGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTECEAFP*VRLGRS
Trigger: GCTCCGGCCCAGCCTCACCCAGGGGAACGCCTCGCA...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR CCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAACGCGGACTCCCACCCTaGGCGCGGACCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTERGLPP*ARTSPS
Trigger: CGATGGAGAGGTCCGCGCCCAGGGTGGGAGTCCGCG...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR CCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGATGGGAAGGCTCCCTCTaGGGAAAAAGGGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGWEGSL*GKRGLG
Trigger: ACCGAGACCCCTTTTTCCCCAGAGGGAGCCTTCCCA...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CCA 90 bp TTAAATAATGTGAAAATGCCACGCGAAGGTTTGAACCAGAGGCCCCTCCAGGGGAGGCCCAGTCTCTGGTaGCCTCTCCGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LNNVKMPREGLNQRPLQGRPSLW*PLRVPG
Trigger: CCCAGGAACACGGAGAGGCCACCAGAGACTGGGCCT...CCCCTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCATTTTCACATTATTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAACCTCTCCATCGTCCGTaGGCACCTGCGAGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTEPLHRP*APARRS
Trigger: GGAACGCCTCGCAGGTGCTCACGGACGATGGAGAGG...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR GCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAATCGTCCGTGAGCACCTaGGAGGCGTTCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTESSVST*EAFPWV
Trigger: CACCCAGGGGAACGCCTCGCAGGTGCTCACGGACGA...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR GCA 90 bp CTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGTCAGCAGCTGTTCCGTaGTCACTTGAACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: LQAQKSSVQFRERRLSMESAAVP*SLEPRR
Trigger: CCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGA...CTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR TCA 90 bp GCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGATTCAGGTCCCCCAGTTaGCAGAACTCCATAATCAGC +
Preference number: 4 (lower is better)
Translates to: APGPKEFSSVPRKAALYGFRSPS*QNSIIS
Trigger: GCTGATTATGGAGTTCTGTCAACTGGGGGACCTGAA...TCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR GCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAACACACATACATCACGTaGCAGGCCGCCGCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTEHTYIT*QAAAVS
Trigger: CGAGACGGCGGCGGCCTGGCACGTGATGTATGTGTG...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR CCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAATGGCAAAGCTGGGACTaGAACCCGGTCCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTEWQSWD*NPVHRG
Trigger: TCCCCGATGGACCGGGTTCCAGTCCCAGCTTTGCCA...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR CCA 90 bp TATGAGTATTTAGTCTGTGCCAGGTATCGTCCGCAGCGTTTTACACGTACAGAAACACAAGCCGGGGAGTaGCAAAGCTGGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: YEYLVCARYRPQRFTRTETQAGE*QSWDWN
Trigger: GTTCCAGTCCCAGCTTTGCCACTCCCCGGCTTGTGT...TTCTGTACGTGTAAAACGCTGCGGACGATACCTGGCACAGACTAAATACTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS GCA 90 bp CCGCCGCCGTCTCGGGGTCACATCCCACCCTCCAGCGCCCCGAGCTaGAGACACACCCGGAAGCGCGGACTCCCACCCTGGGCGCGGACC +
Preference number: 5 (lower is better)
Translates to: PPPSRGHIPPSSAPS*RHTRKRGLPPWART
Trigger: GGTCCGCGCCCAGGGTGGGAGTCCGCGCTTCCGGGTGTGTCTGCAGCTCGGGGCGCTGGAGGGTGGGATGTGACCCCGAGACGGCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS TCA 90 bp CCCCCAGGGACCAGATGTTGCTCTCGCGGCTCTGGTCCACCACCATaGAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PPGTRCCSRGSGPPP*RSRGAPRGARAPPS
Trigger: GCTGGGCGGCGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAACATCTGGTCCCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 90 bp GCGCGGACCTCTCCATCGTCCGTGAGCACCTGCGAGGCGTTCCCCTaGGTGAGGCTGGGCCGGAGCTGCGCACCCAAGACGCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ARTSPSSVSTCEAFP*VRLGRSCAPKTQPQ
Trigger: CTGAGGCTGCGTCTTGGGTGCGCAGCTCCGGCCCAGCCTCACCCAGGGGAACGCCTCGCAGGTGCTCACGGACGATGGAGAGGTCCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598924.1
ENST00000650440.1
CDS CCA 90 bp AGCGCCCCGAGCTGCAGACACACCCGGAAGCGCGGACTCCCACCCTaGGCGCGGACCTCTCCATCGTCCGTGAGCACCTGCGAGGCGTTC +
Preference number: 5 (lower is better)
Translates to: SAPSCRHTRKRGLPP*ARTSPSSVSTCEAF
Trigger: GAACGCCTCGCAGGTGCTCACGGACGATGGAGAGGTCCGCGCCCAGGGTGGGAGTCCGCGCTTCCGGGTGTGTCTGCAGCTCGGGGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS CCA 90 bp CGTGGGGGCTGGACCCCAACTCTCGGGCGTCTTCTCCCAGGGCCCTaGGGCTCTCCAAGGCCCAGTCTCTGGTGGCCTCTCCGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: RGGWTPTLGRLLPGP*GSPRPSLWWPLRVP
Trigger: AGGAACACGGAGAGGCCACCAGAGACTGGGCCTTGGAGAGCCCCAGGGCCCTGGGAGAAGACGCCCGAGAGTTGGGGTCCAGCCCCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTTGTGGGAATGCAGGTGCGCCAGCCCGCGGGCGATCTCCAGGCCCATCCTCTGGCTGCGGGGCAGGCATaGGCAGGGAGACCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: VVGMQVRQPAGDLQAHPLAAGQA*AGRPQP
Trigger: TGGCTGAGGTCTCCCTGCCAATGCCTGCCCCGCAGC...CAGAGGATGGGCCTGGAGATCGCCCGCGGGCTGGCGCACCTGCATTCCCACAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAGCTTCCGAGATGAACTaGCGTTGCTCCAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPASEMN*RCSRGP
Trigger: GGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGC...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CAA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACGGGAGAGCCTGGCTTaGATCTGCTCGCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPRESLA*ICSLFP
Trigger: GGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCCG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGGGGACCCCGGCGGCTaGGGCCACCTCCAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: EEGPPLCRGAPGPKEFSSGDPGG*GHLQGC
Trigger: GCAGCCTTGGAGGTGGCCCAAGCCGCCGGGGTCCCC...TGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGGGGCGCTGGAGGCGTaGACGGGTCCGTGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSGALEA*TGPCPP
Trigger: AGGGGGACACGGACCCGTCAACGCCTCCAGCGCCCC...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGGTCCGGGTCCCCGAAGCCTGCGGCCCCTGTCTTGGGCCAGGAGTGGGTGAGGCCATTCTCTGACACCTaGTCCTCGCTCTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GSGSPKPAAPVLGQEWVRPFSDT*SSLFGG
Trigger: ACCCCCAAAGAGCGAGGACAAGGTGTCAGAGAATGG...CCTCACCCACTCCTGGCCCAAGACAGGGGCCGCAGGCTTCGGGGACCCGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCCCCGGGGCCTCCCGTTaGGCACATGGTAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFPGASR*AHGRGV
Trigger: CACTCCCCTACCATGTGCCAAACGGGAGGCCCCGGG...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS TCA 90 bp GTCACATCCTCCCGCAGGGACATCAGCAGCTGTTCCGTGCTCACTTaGACCACGAAGGTCGGCTTCTCCCGGGGCCCCGGGAGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VTSSRRDISSCSVLT*TTKVGFSRGPGSGS
Trigger: GCTCCCACTCCCGGGGCCCCGGGAGAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGATGTCCCTGCGGGAGGATGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGGGGGACCCCGGCGGCTaGGGCCACCTCCAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRGDPGG*GHLQGC
Trigger: GCAGCCTTGGAGGTGGCCCAAGCCGCCGGGGTCCCC...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp CGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCGGGGCGCTGGAGGCGTaGACGGGTCCGTGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: RGAPGPKEFSSVPRKAALGALEA*TGPCPP
Trigger: AGGGGGACACGGACCCGTCAACGCCTCCAGCGCCCC...GAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGGGGCGCTGGAGGCGTaGACGGGTCCGTGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGGALEA*TGPCPP
Trigger: AGGGGGACACGGACCCGTCAACGCCTCCAGCGCCCC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 90 bp CATCGGGGACACCGACACATCAGACAAGGACACACATACATCACGTaGCAGGCCGCCGCCGTCTCGGGGTCACATCCCACCCTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: HRGHRHIRQGHTYIT*QAAAVSGSHPTLQR
Trigger: GCGCTGGAGGGTGGGATGTGACCCCGAGACGGCGGCGGCCTGGCACGTGATGTATGTGTGTCCTTGTCTGATGTGTCGGTGTCCCCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS-3UTR CAA 90 bp GTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCCCGACATCGCCCCGTTaGCAGCACAGACAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VGEEGPPLCRGAPGPKEFPTSPR*QHRQVR
Trigger: CCTCACCTGTCTGTGCTGCAAACGGGGCGATGTCGG...GAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CAA 90 bp ACCCAGGCACTGGAGGACATTGGGGTGCTGCAGGCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTaGCTCCAGGGGCCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: TQALEDIGVLQAPVRLCFRDELA*LQGPRA
Trigger: AGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCG...GAAGCACAGCCGTACAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp TGCTGTGGGCCAGCCCGTAGTCTCCGATGCGCACGGTCAGGTCAGAGGTCAGCAGCTTCCGAGATGAACTaGCGTTGCTCCAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: CCGPARSLRCARSGQRSAASEMN*RCSRGP
Trigger: GGGGCCCCTGGAGCAACGCAAGTTCATCTCGGAAGC...TGCTGACCTCTGACCTGACCGTGCGCATCGGAGACTACGGGCTGGCCCACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCACACAGGCACTCGAGGTaGAGGCCGCGGCTACTCTCG +
Preference number: 5 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSHRHSR*RPRLLS
Trigger: CGAGAGTAGCCGCGGCCTCAACCTCGAGTGCCTGTG...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTCTACCCATCCGGCCTTaGCGTCCACGCCGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: AVVAVAPSSTEDSILNPSLPIRP*RPRRFR
Trigger: CCGGAAGCGGCGTGGACGCAAAGGCCGGATGGGTAG...AGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS GCA 90 bp GGTTCCTTGTCACATCCTCCCGCAGGGACATCAGCAGCTGTTCCGTaGTCACTTGAACCACGAAGGTCGGCTTCTCCCGGGGCCCCGGGA +
Preference number: 5 (lower is better)
Translates to: GSLSHPPAGTSAAVP*SLEPRRSASPGAPG
Trigger: TCCCGGGGCCCCGGGAGAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGATGTCCCTGCGGGAGGATGTGACAAGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 90 bp TCACCCCGTTCACTGGGAGGCTCAGGCTTGGGGCTTGTTTCCCGTTaGCCAGGACTGTCGGGTCCCTGTTCAGGCCCGGGACTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: SPRSLGGSGLGLVSR*PGLSGPCSGPGLSL
Trigger: GAGAGAAAGTCCCGGGCCTGAACAGGGACCCGACAGTCCTGGGCAACGGGAAACAAGCCCCAAGCCTGAGCCTCCCAGTGAACGGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 90 bp CCCGTTCTCCAGCACTGTCACCCCGTTCACTGGGAGGCTCAGGCTTaGGGCTTGTTTCCCGTTGCCCAGGACTGTCGGGTCCCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PVLQHCHPVHWEAQA*GLFPVAQDCRVPVQ
Trigger: CTGAACAGGGACCCGACAGTCCTGGGCAACGGGAAACAAGCCCCAAGCCTGAGCCTCCCAGTGAACGGGGTGACAGTGCTGGAGAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAAGGCACTGGAGGACATaGGGGTGCTGCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: WVRRDLRCVEGLQAQKSSRHWRT*GCCRLL
Trigger: CAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCT...TGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CAA 90 bp GGGCCAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCACTTCAGGTCCCCCAGTaGACAGAACTCCATAATCAG +
Preference number: 5 (lower is better)
Translates to: GPGVGEEGPPLCRGAPGPLQVPQ*TELHNQ
Trigger: CTGATTATGGAGTTCTGTCAACTGGGGGACCTGAAG...TGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CAA 90 bp GCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTCCCAGGGACCAGATGTaGCTCTCGCGGCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: AVVAVAPSSTEDSILNPSPRDQM*LSRLWS
Trigger: GGACCAGAGCCGCGAGAGCAACATCTGGTCCCTGGG...AGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTCCCCCAGGAGGTTCCTaGTCACATCCTCCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: AVVAVAPSSTEDSILNPSPPGGS*SHPPAG
Trigger: CCCTGCGGGAGGATGTGACAAGGAACCTCCTGGGGG...AGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTCGGGAGAGCCTGGCTTaGATCTGCTCGCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSRESLA*ICSLFP
Trigger: GGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCCG...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTGGACGCTCAGCTCGTaGGTTGGCGTCTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GEEGPPLCRGAPGPKEFSWTLSS*VGVSWS
Trigger: CGACCAGGAGACGCCAACCAACGAGCTGAGCGTCCA...ACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 90 bp CTGGGGCTCTCCAAGGCCCAGTCTCTGGTGGCCTCTCCGTGTTCCTaGGGAATCTCAGGCCCCCATTCTCTGACACCTTGTCCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: LGLSKAQSLVASPCS*GISGPHSLTPCPRS
Trigger: AGAGCGAGGACAAGGTGTCAGAGAATGGGGGCCTGAGATTCCCCAGGAACACGGAGAGGCCACCAGAGACTGGGCCTTGGAGAGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGCAGGCTCCTGTACGGCTGTGCTTCCGAGATGAACTTGCGTTGCTCCAGGGGCAGGCACTGGAGGACATaGGGGTGCTGCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: CRLLYGCASEMNLRCSRGRHWRT*GCCRLL
Trigger: CAGGAGCCTGCAGCACCCCAATGTCCTCCAGTGCCT...GCCCCTGGAGCAACGCAAGTTCATCTCGGAAGCACAGCCGTACAGGAGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp CCGCGCTGGCTCGGAGCTCCTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGACTTCAGGTCCCCCAGTaGACAGAACTCCATAATCAG +
Preference number: 5 (lower is better)
Translates to: PRWLGAPSPPPGRGCSRRLQVPQ*TELHNQ
Trigger: CTGATTATGGAGTTCTGTCAACTGGGGGACCTGAAG...TCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAGGAGCTCCGAGCCAGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp CAGGAGTGGGTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGCTGTTCCGTGCTCACTaGAACCACGAAGGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: QEWVRRDLRCVEGLQAQKLFRAH*NHEGRL
Trigger: AAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAG...CTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCACCCACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTGCTCAGGCTTGGGGCTaGTTTCCCGTTGCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVAQAWG*FPVAQD
Trigger: GTCCTGGGCAACGGGAAACAAGCCCCAAGCCTGAGC...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTACCCATCCGGCCTTaGCGTCCACGCCGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRLPIRP*RPRRFR
Trigger: CCGGAAGCGGCGTGGACGCAAAGGCCGGATGGGTAG...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTTGGACGCTCAGCTCGTaGGTTGGCGTCTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVWTLSS*VGVSWS
Trigger: CGACCAGGAGACGCCAACCAACGAGCTGAGCGTCCA...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAACCCGGGGCCTCCCGTTaGGCACATGGTAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LRCVEGLQAQKSSVQFREPGASR*AHGRGV
Trigger: CACTCCCCTACCATGTGCCAAACGGGAGGCCCCGGG...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCAACCCCTCTGGATTCCTGCCTCATTaGGCTCCGAGGGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: AVVAVAPSSTEDSILNPSGFLPH*APRGSG
Trigger: CCCTGACCCCCTCGGAGCCAAATGAGGCAGGAATCC...AGAGGGGTTGAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS TCA 90 bp CCGCTCGGAGAGCAAGTAGGTGAGCTGCAATTGGAGATCAGAGGCTaGAGGGCGCTGGGCAGGTGGCCGCCAGCAGGACTGAAGAATGTC +
Preference number: 5 (lower is better)
Translates to: PLGEQVGELQLEIRG*RALGRWPPAGLKNV
Trigger: GACATTCTTCAGTCCTGCTGGCGGCCACCTGCCCAGCGCCCTTCAGCCTCTGATCTCCAATTGCAGCTCACCTACTTGCTCTCCGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TCCACAGGCGCTCTGGGGTCAGGTAGTAGTCCTCCTTGTAGTTGCTGTGGGCCACCGACATCGCCCCGTTaGCAGCACAGACAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: STGALGSGSSPPCSCCGPPTSPR*QHRQVR
Trigger: CCTCACCTGTCTGTGCTGCAAACGGGGCGATGTCGG...TGGCCCACAGCAACTACAAGGAGGACTACTACCTGACCCCAGAGCGCCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp CAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGCCCAGGGACCAGATGTaGCTCTCGCGGCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QKSSVQFRERRLSMEGRGPRDQM*LSRLWS
Trigger: GGACCAGAGCCGCGAGAGCAACATCTGGTCCCTGGG...CCCCCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAACACAGGCACTCGAGGTaGAGGCCGCGGCTACTCTCG +
Preference number: 5 (lower is better)
Translates to: LRCVEGLQAQKSSVQFREHRHSR*RPRLLS
Trigger: CGAGAGTAGCCGCGGCCTCAACCTCGAGTGCCTGTG...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GCGGCGTCTGCGGTGGTGGCAGTGGCGCCGTCATCCACAGAGGATTCCATTCTCCTGTTCCGTGCTCACTaGAACCACGAAGGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: AASAVVAVAPSSTEDSILLFRAH*NHEGRL
Trigger: AAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAG...GAGAATGGAATCCTCTGTGGATGACGGCGCCACTGCCACCACCGCAGACGCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGCTCAGGCTTGGGGCTaGTTTCCCGTTGCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGAQAWG*FPVAQD
Trigger: GTCCTGGGCAACGGGAAACAAGCCCCAAGCCTGAGC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGGCTGCGGCCTCGTGTaGTCTACCCATCCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: VSRGSRPKRVQFSSEKGGGCGLV*STHPAF
Trigger: AAAGGCCGGATGGGTAGACAACACGAGGCCGCAGCC...GCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp AGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCGGATTCCTGCCTCATTaGGCTCCGAGGGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RDLRCVEGLQAQKSSVQFGFLPH*APRGSG
Trigger: CCCTGACCCCCTCGGAGCCAAATGAGGCAGGAATCC...GAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGATGCCACGCGAAGGTTaGAACCAGAGGCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GPPLCRGAPGPKEFSSVPMPREG*NQRPLQ
Trigger: CTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCAT...CGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS TCA 90 bp AGCAGGACTGAAGAATGTCATACCAGTAGTCCGCGTAAGGCAGCTTaGGCCTCGGCCGGGCCAGCTTCACATGCTGCTGGCGGACCACGA +
Preference number: 5 (lower is better)
Translates to: SRTEECHTSSPRKAA*ASAGPASHAAGGPR
Trigger: TCGTGGTCCGCCAGCAGCATGTGAAGCTGGCCCGGCCGAGGCTCAAGCTGCCTTACGCGGACTACTGGTATGACATTCTTCAGTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGCTCGGAGCTCCTTCACCACCACCTGGGCGGGGGTGTAGTCGGAGAAAATCTCGGGTTCTCAAATTCCTaGAAGCCGACATCGCCCCGT +
Preference number: 5 (lower is better)
Translates to: GSELLHHHLGGGVVGENLGFSNS*KPTSPR
Trigger: ACGGGGCGATGTCGGCTTCAAGGAATTTGAGAACCC...GAGATTTTCTCCGACTACACCCCCGCCCAGGTGGTGGTGAAGGAGCTCCGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647709.2
CDS-3UTR CAA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGCGAGATGAACTTGCGTaGCTCCAGGGGCCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWRDELA*LQGPRA
Trigger: AGCGCGGGGCCCCTGGAGCAACGCAAGTTCATCTCG...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CAA 90 bp CAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGGGGGGGCTGCGGCCTCGTGTaGTCTACCCATCCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: QKSSVQFRERRLSMEGRGGCGLV*STHPAF
Trigger: AAAGGCCGGATGGGTAGACAACACGAGGCCGCAGCC...CCCCCGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCGGGAGAGCCTGGCTTaGATCTGCTCGCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRRESLA*ICSLFP
Trigger: GGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCCG...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGTGGACGCTCAGCTCGTaGGTTGGCGTCTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRWTLSS*VGVSWS
Trigger: CGACCAGGAGACGCCAACCAACGAGCTGAGCGTCCA...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp CTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGCCCCCAGGAGGTTCCTaGTCACATCCTCCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: LQAQKSSVQFRERRLSMEPPGGS*SHPPAG
Trigger: CCCTGCGGGAGGATGTGACAAGGAACCTCCTGGGGG...CTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGGCTCAGGCTTGGGGCTaGTTTCCCGTTGCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWAQAWG*FPVAQD
Trigger: GTCCTGGGCAACGGGAAACAAGCCCCAAGCCTGAGC...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GTGAGGAGGGACCTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCCATTCTCTGACACCTaGTCCTCGCTCTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: VRRDLRCVEGLQAQKSSVPFSDT*SSLFGG
Trigger: ACCCCCAAAGAGCGAGGACAAGGTGTCAGAGAATGG...AACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAGGTCCCTCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGGGCTGCGGCCTCGTGTaGTCTACCCATCCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWGCGLV*STHPAF
Trigger: AAAGGCCGGATGGGTAGACAACACGAGGCCGCAGCC...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp CTCCGCTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAACGCTCAGCTCGTTGGTaGGCGTCTCCTGGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: LRCVEGLQAQKSSVQFRERSARW*ASPGRR
Trigger: TCTTCGACCAGGAGACGCCAACCAACGAGCTGAGCG...TTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp CTGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGCGCTCAGCTCGTTGGTaGGCGTCTCCTGGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: LCRGAPGPKEFSSVPRKARSARW*ASPGRR
Trigger: TCTTCGACCAGGAGACGCCAACCAACGAGCTGAGCG...CGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGCGCTCAGCTCGTTGGTaGGCGTCTCCTGGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWRSARW*ASPGRR
Trigger: TCTTCGACCAGGAGACGCCAACCAACGAGCTGAGCG...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp GGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGATGCCACGCGAAGGTTaGAACCAGAGGCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GSRPKRVQFSSEKGGSLWMPREG*NQRPLQ
Trigger: CTGGAGGGGCCTCTGGTTCAAACCTTCGCGTGGCAT...CCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS-3UTR CAA 90 bp TGTGTCGAGGGGCTCCAGGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGGGGTTCTCAAATTCCTaGAAGCCGACATCGCCCCGT +
Preference number: 5 (lower is better)
Translates to: CVEGLQAQKSSVQFRERRGFSNS*KPTSPR
Trigger: ACGGGGCGATGTCGGCTTCAAGGAATTTGAGAACCC...CCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCCTGGAGCCCCTCGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673139.1
CDS-3UTR CAA 90 bp GGCCCAAAAGAGTTCAGTTCAGTTCCGAGAAAGGCGGCTCTCTATGGAGGGGCGCCATTCTCTGACACCTaGTCCTCGCTCTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GPKEFSSVPRKAALYGGAPFSDT*SSLFGG
Trigger: ACCCCCAAAGAGCGAGGACAAGGTGTCAGAGAATGG...CGCCCCTCCATAGAGAGCCGCCTTTCTCGGAACTGAACTGAACTCTTTTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648216.1
ENST00000672160.1
ENST00000673139.1
CDS CAA 90 bp CTCTCCAGCTCGCTGTCCTCTGGCTCGTCGGCCCCGCGCGGAGACTaGAGCAGCCCCCGCAGCGGGCGGGCCGCGTCCGCGTCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSLSSGSSAPRGD*SSPRSGRAASASAL
Trigger: CAGCGCCGACGCGGACGCGGCCCGCCCGCTGCGGGGGCTGCTCAAGTCTCCGCGCGGGGCCGACGAGCCAGAGGACAGCGAGCTGGAGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 72 bp TGGCTGCGGCCTCGTGTTGTCTACCCATCCGGCCTTTaGGTCCACGCCGCTTCCGGGGCCGCCGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: WLRPRVVYPSGL*VHAASGAAAGG
Trigger: GCCCCCGGCGGCGGCCCCGGAAGCGGCGTGGACGCAAAGGCCGGATGGGTAGACAACACGAGGCCGCAGCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 72 bp GGAGGTGGTGGCGGCCGGAAGCGCGGACTCCCACCCTaGGCGCGGACCTCTCCATCGTCCGTGAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: GGGGGRKRGLPP*ARTSPSSVSTC
Trigger: GCAGGTGCTCACGGACGATGGAGAGGTCCGCGCCCAGGGTGGGAGTCCGCGCTTCCGGCCGCCACCACCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650440.1
CDS GCA 72 bp CAAAACGCGCAGCCGTGGCGCACACCGGCCGGGCAGTaGACACTCCCCGCAGAGCGCAGCCGTCCTCATCGG +
Preference number: 6 (lower is better)
Translates to: QNAQPWRTPAGQ*TLPAERSRPHR
Trigger: CCGATGAGGACGGCTGCGCTCTGCGGGGAGTGTGCACTGCCCGGCCGGTGTGCGCCACGGCTGCGCGTTTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650440.1
CDS CCA 72 bp AAGGGGTCTCGGTCTCGTAGCCGCTGTCCCCCGGCTTaGGGCCCGGCGACGAGAGGCCTGAACCGGGACTGG +
Preference number: 6 (lower is better)
Translates to: KGSRSRSRCPPA*GPATRGLNRDW
Trigger: CCAGTCCCGGTTCAGGCCTCTCGTCGCCGGGCCCCAAGCCGGGGGACAGCGGCTACGAGACCGAGACCCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 72 bp TCTCCATCGTCCGTGAGCACCTGCGAGGCGTTCCCCTaGGTGAGGCTGGGCCGGAGCTGCGCACCCAAGACG +
Preference number: 6 (lower is better)
Translates to: SPSSVSTCEAFP*VRLGRSCAPKT
Trigger: CGTCTTGGGTGCGCAGCTCCGGCCCAGCCTCACCCAGGGGAACGCCTCGCAGGTGCTCACGGACGATGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598924.1
ENST00000650440.1
CDS CCA 72 bp AGCTGCAGACACACCCGGAAGCGCGGACTCCCACCCTaGGCGCGGACCTCTCCATCGTCCGTGAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: SCRHTRKRGLPP*ARTSPSSVSTC
Trigger: GCAGGTGCTCACGGACGATGGAGAGGTCCGCGCCCAGGGTGGGAGTCCGCGCTTCCGGGTGTGTCTGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS TCA 72 bp GCGGCAGCGCCAGCGAGAGCCGGGAGAGCCTGGCTTTaGTCTGCTCGCTGTTCCCCTGAGGGGGTCCCAAGT +
Preference number: 6 (lower is better)
Translates to: AAAPARAGRAWL*SARCSPEGVPS
Trigger: ACTTGGGACCCCCTCAGGGGAACAGCGAGCAGATCAAAGCCAGGCTCTCCCGGCTCTCGCTGGCGCTGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 72 bp GGCAGCTTGAGCCTCGGCCGGGCCAGCTTCACATGCTaGTGGCGGACCACGAAGGCGAGGACCTCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: GSLSLGRASFTC*WRTTKARTSSS
Trigger: AGACGAGGAGGTCCTCGCCTTCGTGGTCCGCCAGCAGCATGTGAAGCTGGCCCGGCCGAGGCTCAAGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 72 bp CCGCCCACTCGAAACTGCCTCCAAAGCCGCTGTCGTTaGTGGGAAACCCATCTCCGGGGGTGGCGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: PPTRNCLQSRCR*WETHLRGWRGG
Trigger: CCCACCCCGCCACCCCCGGAGATGGGTTTCCCAGCAACGACAGCGGCTTTGGAGGCAGTTTCGAGTGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 72 bp GACCATCTTGCGCTTCCTCTCCAGCTCGCTGTCCTCTaGCTCGTCGGCCCCGCGCGGAGACTTGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: DHLALPLQLAVL*LVGPARRLEQP
Trigger: GGGCTGCTCAAGTCTCCGCGCGGGGCCGACGAGCCAGAGGACAGCGAGCTGGAGAGGAAGCGCAAGATGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS TCA 72 bp ACCAGATGTTGCTCTCGCGGCTCTGGTCCACCACCATaGAGGTCCCGTGGAGCTCCCCGAGGAGCTCGGGCG +
Preference number: 6 (lower is better)
Translates to: TRCCSRGSGPPP*RSRGAPRGARA
Trigger: CGCCCGAGCTCCTCGGGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAACATCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS TCA 72 bp TCCCGCAGGGACATCAGCAGCTGTTCCGTGCTCACTTaGACCACGAAGGTCGGCTTCTCCCGGGGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: SRRDISSCSVLT*TTKVGFSRGPG
Trigger: CCCGGGGCCCCGGGAGAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGATGTCCCTGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 72 bp GTCACCCCCAGGGACCAGATGTTGCTCTCGCGGCTCTaGTCCACCACCATGAAGGTCCCGTGGAGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: VTPRDQMLLSRL*STTMKVPWSSP
Trigger: CGGGGAGCTCCACGGGACCTTCATGGTGGTGGACCAGAGCCGCGAGAGCAACATCTGGTCCCTGGGGGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CCA 72 bp AGCTTGAGCCTCGGCCGGGCCAGCTTCACATGCTGCTaGCGGACCACGAAGGCGAGGACCTCCTCGTCTGAC +
Preference number: 6 (lower is better)
Translates to: SLSLGRASFTCC*RTTKARTSSSD
Trigger: GTCAGACGAGGAGGTCCTCGCCTTCGTGGTCCGCCAGCAGCATGTGAAGCTGGCCCGGCCGAGGCTCAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CAA 72 bp CTCCCGCAGGGACATCAGCAGCTGTTCCGTGCTCACTaGAACCACGAAGGTCGGCTTCTCCCGGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LPQGHQQLFRAH*NHEGRLLPGPR
Trigger: CCGGGGCCCCGGGAGAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGATGTCCCTGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CAA 72 bp TCCGCCCACTCGAAACTGCCTCCAAAGCCGCTGTCGTaGCTGGGAAACCCATCTCCGGGGGTGGCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SAHSKLPPKPLS*LGNPSPGVAGW
Trigger: CCACCCCGCCACCCCCGGAGATGGGTTTCCCAGCAACGACAGCGGCTTTGGAGGCAGTTTCGAGTGGGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CAA 90 bp CTCCAGCACTGTCACCCCGTTCACTGGGAGGCTCAGGCTTGGGGCTaGTTTCCCGTTGCCCAGGACTGTCGGGTCCCTGTTCAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: LQHCHPVHWEAQAWG*FPVAQDCRVPVQAR
Trigger: CCGGGCCTGAACAGGGACCCGACAGTCCTGGGCAACGGGAAACAAGCCCCAAGCCTGAGCCTCCCAGTGAACGGGGTGACAGTGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000600059.6
ENST00000648216.1
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS TCA 72 bp GTGGGGGCCGGGGAGGCCGCTCGGAGAGCAAGTAGGTaGGCTGCAATTGGAGATCAGAGGCTGAAGGGCGCT +
Preference number: 6 (lower is better)
Translates to: VGAGEAARRASR*AAIGDQRLKGA
Trigger: AGCGCCCTTCAGCCTCTGATCTCCAATTGCAGCTCACCTACTTGCTCTCCGAGCGGCCTCCCCGGCCCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CAA 90 bp TGTCACATCCTCCCGCAGGGACATCAGCAGCTGTTCCGTGCTCACTaGAACCACGAAGGTCGGCTTCTCCCGGGGCCCCGGGAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: CHILPQGHQQLFRAH*NHEGRLLPGPREWE
Trigger: CTCCCACTCCCGGGGCCCCGGGAGAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGATGTCCCTGCGGGAGGATGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS CAA 90 bp GTCCTGTCTCCCGGGCTGTCGCCCCCTTCTCCCCCAGGAGGTTCCTaGTCACATCCTCCCGCAGGGACATCAGCAGCTGTTCCGTGCTCA +
Preference number: 6 (lower is better)
Translates to: VLSPGLSPPSPPGGS*SHPPAGTSAAVPCS
Trigger: TGAGCACGGAACAGCTGCTGATGTCCCTGCGGGAGGATGTGACAAGGAACCTCCTGGGGGAGAAGGGGGCGACAGCCCGGGAGACAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 72 bp GATGAGGCAACTGAGGCACAGCGCGGGGTAGTCACCTaGCCCAAGGCACACAAGCCGGGGAGTGGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: DEATEAQRGVVT*PKAHKPGSGKA
Trigger: AGCTTTGCCACTCCCCGGCTTGTGTGCCTTGGGGCAGGTGACTACCCCGCGCTGTGCCTCAGTTGCCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS TCA 72 bp GAGCAAGTAGGTGAGCTGCAATTGGAGATCAGAGGCTaGAGGGCGCTGGGCAGGTGGCCGCCAGCAGGACTG +
Preference number: 6 (lower is better)
Translates to: EQVGELQLEIRG*RALGRWPPAGL
Trigger: CAGTCCTGCTGGCGGCCACCTGCCCAGCGCCCTTCAGCCTCTGATCTCCAATTGCAGCTCACCTACTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS GCA 72 bp CACCGACACATCAGACAAGGACACACATACATCACGTaGCAGGCCGCCGCCGTCTCGGGGTCACATCCCACC +
Preference number: 6 (lower is better)
Translates to: HRHIRQGHTYIT*QAAAVSGSHPT
Trigger: GGTGGGATGTGACCCCGAGACGGCGGCGGCCTGGCACGTGATGTATGTGTGTCCTTGTCTGATGTGTCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS CCA 72 bp CAAGGCACACAAGCCGGGGAGTGGCAAAGCTGGGACTaGAACCCGGTCCATCGGGGACACCGACACATCAGA +
Preference number: 6 (lower is better)
Translates to: QGTQAGEWQSWD*NPVHRGHRHIR
Trigger: TCTGATGTGTCGGTGTCCCCGATGGACCGGGTTCCAGTCCCAGCTTTGCCACTCCCCGGCTTGTGTGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598924.1
CDS TCA 72 bp AGCCAGCGGGAGAATGTAGACATCAGGCAGCGACTGTaGGGAGGAGGTCTCCTCCGCAGGGGGAGTGTACTC +
Preference number: 6 (lower is better)
Translates to: SQRENVDIRQRL*GGGLLRRGSVL
Trigger: GAGTACACTCCCCCTGCGGAGGAGACCTCCTCCTCACAGTCGCTGCCTGATGTCTACATTCTCCCGCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000647709.2
ENST00000650440.1
ENST00000673139.1
CDS GCA 72 bp TCACATCCTCCCGCAGGGACATCAGCAGCTGTTCCGTaGTCACTTGAACCACGAAGGTCGGCTTCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: SHPPAGTSAAVP*SLEPRRSASPG
Trigger: CCCGGGAGAAGCCGACCTTCGTGGTTCAAGTGAGCACGGAACAGCTGCTGATGTCCCTGCGGGAGGATGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1
CDS TCA 72 bp GAAGAATGTCATACCAGTAGTCCGCGTAAGGCAGCTTaGGCCTCGGCCGGGCCAGCTTCACATGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: EECHTSSPRKAA*ASAGPASHAAG
Trigger: GCCAGCAGCATGTGAAGCTGGCCCGGCCGAGGCTCAAGCTGCCTTACGCGGACTACTGGTATGACATTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000600059.6
ENST00000650440.1
ENST00000672160.1
ENST00000673139.1