RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMOD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163380

Ensembl transcript IDs: ENST00000420581.7, ENST00000475434.1, ENST00000489031.5

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCAAGGGAGTCACCAAGAGAGAAAGCCAGGCAGGGTGGGAAACTaGAAATCTCCACTGATTCTGCAGAGAAGCTCTAAGGAACAATCC +
Preference number: 1 (lower is better)
Translates to: HQGSHQERKPGRVGN*KSPLILQRSSKEQS
Trigger: GGATTGTTCCTTAGAGCTTCTCTGCAGAATCAGTGGAGATTTTCAGTTTCCCACCCTGCCTGGCTTTCTCTCTTGGTGACTCCCTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR TCA 90 bp ACCAAGAGAGAAAGCCAGGCAGGGTGGGAAACTGAAAATCTCCACTaGTTCTGCAGAGAAGCTCTAAGGAACAATCCTTCCATTTCAAAG +
Preference number: 1 (lower is better)
Translates to: TKRESQAGWETENLH*FCREALRNNPSISK
Trigger: CTTTGAAATGGAAGGATTGTTCCTTAGAGCTTCTCTGCAGAATCAGTGGAGATTTTCAGTTTCCCACCCTGCCTGGCTTTCTCTCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR GCA 90 bp GGGAAGTCTCTTGGAAGGATTAATGCGAGCAAAGGCACAAGGGTGTaGACAAGGATGTTTCATCGAGTAGAGTATAAAGGATTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: GKSLGRINASKGTRV*TRMFHRVEYKGFVG
Trigger: TCCCACAAATCCTTTATACTCTACTCGATGAAACATCCTTGTGCACACCCTTGTGCCTTTGCTCGCATTAATCCTTCCAAGAGACTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR GCA 90 bp TCCACCTTCCTCTTCAGCCCCTACTTCTTCATGGCCCAAACATTCTaGCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGT +
Preference number: 1 (lower is better)
Translates to: STFLFSPYFFMAQTF*LLQIPLSDGSIVSS
Trigger: ACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGGGGCTGAAGAGGAAGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
3UTR TCA 90 bp AGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTGCTGCTaGCATAGTCTCCATGCTGTAATCCAAGAGTCACTATTTCCATTT +
Preference number: 1 (lower is better)
Translates to: SIVSSSATWILKYCC*HSLHAVIQESLFPF
Trigger: AAATGGAAATAGTGACTCTTGGATTACAGCATGGAGACTATGTCAGCAGCAATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
3UTR-3UTR GCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCATGGCCCAAACATTCTaGCTTTTACAAATACCCTTA +
Preference number: 2 (lower is better)
Translates to: PGVEDWVGRSLMENRREVMAQTF*LLQIPL
Trigger: TAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCAT...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR-3UTR TCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGACTGAAAATCTCCACTaGTTCTGCAGAGAAGCTCTA +
Preference number: 2 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLTENLH*FCREAL
Trigger: TAGAGCTTCTCTGCAGAATCAGTGGAGATTTTCAGT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 90 bp TTAAGTCTGTCACAATTAGACCTATTCTCCCCTAGCCTGTTTGGTTaGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: LSLSQLDLFSPSLFG*IHATYDNIKGERRQ
Trigger: CTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAACAGGCTAGGGGAGAATAGGTCTAATTGTGACAGACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 90 bp TTTAGCCTCTTAGATGTAGTATGTGCTAGACACTTGAAGTTTTGTTaGTTACAGCCCTTTCTTAGCTATCCTGCTTTGTATGCAAGGATG +
Preference number: 2 (lower is better)
Translates to: FSLLDVVCARHLKFC*LQPFLSYPALYARM
Trigger: CATCCTTGCATACAAAGCAGGATAGCTAAGAAAGGGCTGTAACAAACAAAACTTCAAGTGTCTAGCACATACTACATCTAAGAGGCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 90 bp TTCCTATCAGAGTTTAGCCTCTTAGATGTAGTATGTGCTAGACACTaGAAGTTTTGTTTGTTACAGCCCTTTCTTAGCTATCCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: FLSEFSLLDVVCARH*KFCLLQPFLSYPAL
Trigger: CAAAGCAGGATAGCTAAGAAAGGGCTGTAACAAACAAAACTTCAAGTGTCTAGCACATACTACATCTAAGAGGCTAAACTCTGATAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR-3UTR TCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGACTCTAAATTTCACCTaGGTCACTCAAATTGATTGC +
Preference number: 2 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLTLNFT*VTQIDC
Trigger: GCAATCAATTTGAGTGACTCAGGTGAAATTTAGAGT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 90 bp AGGAGCTCAATTCATCCTTCACATTTCCATAGGATGAAACATTATTaGTTCCCTTTAAGATACTATGTGATGAATTACCGCAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: RSSIHPSHFHRMKHY*FPLRYYVMNYRRRD
Trigger: ATCTCTTCTGCGGTAATTCATCACATAGTATCTTAAAGGGAACAAATAATGTTTCATCCTATGGAAATGTGAAGGATGAATTGAGCTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CCA 72 bp ATGGAGGACACAGGATCTGACCCGGGAGTTGAAGACTaGGTAGGACGTTCATTAATGGAGAACAGGAGGGAA +
Preference number: 3 (lower is better)
Translates to: MEDTGSDPGVED*VGRSLMENRRE
Trigger: TTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGGGTCAGATCCTGTGTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR TCA 72 bp GAAAGCCAGGCAGGGTGGGAAACTGAAAATCTCCACTaGTTCTGCAGAGAAGCTCTAAGGAACAATCCTTCC +
Preference number: 3 (lower is better)
Translates to: ESQAGWETENLH*FCREALRNNPS
Trigger: GGAAGGATTGTTCCTTAGAGCTTCTCTGCAGAATCAGTGGAGATTTTCAGTTTCCCACCCTGCCTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR TCA 72 bp TCCAGTTCTGCCACGTGGATCCTAAAGTATTGCTGCTaGCATAGTCTCCATGCTGTAATCCAAGAGTCACTA +
Preference number: 3 (lower is better)
Translates to: SSSATWILKYCC*HSLHAVIQESL
Trigger: TAGTGACTCTTGGATTACAGCATGGAGACTATGTCAGCAGCAATACTTTAGGATCCACGTGGCAGAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
3UTR GCA 72 bp CTCTTCAGCCCCTACTTCTTCATGGCCCAAACATTCTaGCTTTTACAAATACCCTTATCAGATGGTAGCATT +
Preference number: 3 (lower is better)
Translates to: LFSPYFFMAQTF*LLQIPLSDGSI
Trigger: AATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGGGGCTGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCGTGGCTTACGTGTTCTaGCCCTCACAGGTACCCCTA +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVVAYVF*PSQVPL
Trigger: TAGGGGTACCTGTGAGGGGCAGAACACGTAAGCCAC...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCAGGCTGGAGTACAGTaGCGTGATCTTGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVQAGVQ*RDLVSL
Trigger: CAGTGAGACAAGATCACGTCACTGTACTCCAGCCTG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCTGCATTCTGGAATCTaGCTTGGGTCCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVLHSGI*LGSSQQ
Trigger: CTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGGACATTTTGGGGGTTaGGAGGCCGAGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYGHFGG*EAEVAV
Trigger: CACCGCCACCTCGGCCTCCCAACCCCCAAAATGTCC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCGGACATTTTGGGGGTTaGGAGGCCGAGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSGHFGG*EAEVAV
Trigger: CACCGCCACCTCGGCCTCCCAACCCCCAAAATGTCC...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATCTGGTCTCGAACTCCTaGCCTCTGGAGATCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNLVSNS*PLEILP
Trigger: AGGGAGGATCTCCAGAGGTCAGGAGTTCGAGACCAG...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCTCTCACTGCAACCTCTaGCTCCCCAGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVSHCNL*LPSSSN
Trigger: ATTGCTTGAACTGGGGAGGCAGAGGTTGCAGTGAGA...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCTTCCAGCATGCGCCTaGATGCCTTTTCCCAATACA +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVLPACA*MPFPNT
Trigger: TGTATTGGGAAAAGGCATCCAGGCGCATGCTGGAAG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGTTGGGAGGCCGAGGTaGCGGTGGCTGGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYVGRPR*RWLEEF
Trigger: GAATTCTTCCAGCCACCGCCACCTCGGCCTCCCAAC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCGGCTGGAAGAATTCCTaGATTCTGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVGWKNS*ILESGL
Trigger: CAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCC...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATAGGCCGAGGTGGCGGTaGCTGGAAGAATTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYRPRWR*LEEFLH
Trigger: ATGCAGGAATTCTTCCAGCCACCGCCACCTCGGCCT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGGACATTTTGGGGGTTaGGAGGCCGAGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMGHFGG*EAEVAV
Trigger: CACCGCCACCTCGGCCTCCCAACCCCCAAAATGTCC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGCTGATCTCTGGGAGTaGTTTCCACCAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYADLWE*FPPMGV
Trigger: CACCCCCATTGGTGGAAATCACTCCCAGAGATCAGC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAACTCCTGACCTCATGTaGTTCACCCACCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGTPDLM*FTHLGR
Trigger: GCGGCCGAGGTGGGTGAATCACATGAGGTCAGGAGT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATCCGGCATCCGAGATTTaGGCTGGATTCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNPASEI*AGFSSA
Trigger: AGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGG...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTCTGGAATCTGGCTTaGGTCCTCCCAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSFWNLA*VLPTAP
Trigger: GGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTTGGGAGGCCGAGGTaGCGGTGGCTGGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMVGRPR*RWLEEF
Trigger: GAATTCTTCCAGCCACCGCCACCTCGGCCTCCCAAC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATAGTGATTTCCACCAATaGGGGTGGCCTGTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNSDFHQ*GWPVSR
Trigger: CCGAGAAACAGGCCACCCCCATTGGTGGAAATCACT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGTGGGGTCAGGGGCCATaGCTTCCATTTCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLWGQGP*LPFPTA
Trigger: TGCAGTCGGAAATGGAAGTCATGGCCCCTGACCCCA...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATGGGGTCAGGGGCCATaGCTTCCATTTCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGWGQGP*LPFPTA
Trigger: TGCAGTCGGAAATGGAAGTCATGGCCCCTGACCCCA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATACTGGAGACACCTCATaGTGGCCACAATCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNTGDTS*WPQSLY
Trigger: GTAAAGGGATTGTGGCCATCATGAGGTGTCTCCAGT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCTTGTCCCTCTATATATaGAAACTTGCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVLSLYI*KLAARK
Trigger: CTTCCTGGCAGCAAGTTTTCATATATAGAGGGACAA...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCCGGCATCCGAGATTTaGGCTGGATTCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYPASEI*AGFSSA
Trigger: AGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACTCGGCCGCCTACAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGLGRLQ*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTGTAGGCGGCCGAG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCTGCATTCTGGAATCTaGCTTGGGTCCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLHSGI*LGSSQQ
Trigger: CTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCTGCATTCTGGAATCTaGCTTGGGTCCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLHSGI*LGSSQQ
Trigger: CTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGAGGCCGAGGTGGCGGTaGCTGGAAGAATTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMRPRWR*LEEFLH
Trigger: ATGCAGGAATTCTTCCAGCCACCGCCACCTCGGCCT...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTGGGAGGCCGAGGTaGCGGTGGCTGGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPVGRPR*RWLEEF
Trigger: GAATTCTTCCAGCCACCGCCACCTCGGCCTCCCAAC...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATTCCACCAATGGGGGTaGCCTGTTTCTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGFHQWG*PVSRHW
Trigger: CCAGTGCCGAGAAACAGGCCACCCCCATTGGTGGAA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTCCACCAATGGGGGTaGCCTGTTTCTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMFHQWG*PVSRHW
Trigger: CCAGTGCCGAGAAACAGGCCACCCCCATTGGTGGAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACGAACTCCTGACCTCTaGAGATCCTCCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPRTPDL*RSSLPG
Trigger: GCCAGGGAGGGAGGATCTCCAGAGGTCAGGAGTTCG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATGGGGTCAGGGGCCATaGCTTCCATTTCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPWGQGP*LPFPTA
Trigger: TGCAGTCGGAAATGGAAGTCATGGCCCCTGACCCCA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTGGAGTACAGTGACGTaGTCTTGTCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSWSTVT*SCLTAT
Trigger: GGTTGCAGTGAGACAAGATCACGTCACTGTACTCCA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCCATTTTCTACAAGGTaGATTCTGCCGATAAAATCC +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVPFSTR*ILPIKS
Trigger: GGATTTTATCGGCAGAATTCACCTTGTAGAAAATGG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCACTTCCATTTCCGACTaGAGTTCTTTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVTSISD*SSFSSS
Trigger: TGAAGAACTGAAAGAACTGCAGTCGGAAATGGAAGT...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCGAGAAAGAAGGCAGGTaGCAATTATTTACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGVEDWVGRSLMENRREVEKEGR*QLFTQV
Trigger: TACCTGAGTAAATAATTGGCACCTGCCTTCTTTCTC...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCTTCCAGCATGCGCCTaGATGCCTTTTCCCAATACA +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLPACA*MPFPNT
Trigger: TGTATTGGGAAAAGGCATCCAGGCGCATGCTGGAAG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTCTGGAATCTGGCTTaGGTCCTCCCAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMFWNLA*VLPTAP
Trigger: GGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACGAGGTGGCGGTGGCTaGAAGAATTCCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGRGGGG*KNSCIL
Trigger: CAGAATGCAGGAATTCTTCCAGCCACCGCCACCTCG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATATCCGAGATTTGCGCTaGATTCTCTTCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNIRDLR*ILFSFT
Trigger: GGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGAT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGTCTCGGGTGGTTCTCTaGCTTCCGGCATCCGAGATT +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLSRVVL*LPASEI
Trigger: AATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGA...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCTCGGGTGGTTCTCTaGCTTCCGGCATCCGAGATT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSRVVL*LPASEI
Trigger: AATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCTCGGGTGGTTCTCTaGCTTCCGGCATCCGAGATT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSRVVL*LPASEI
Trigger: AATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCCTGTTTCTCGGCACTaGCTTGAGCGTTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYPVSRH*LERFDD
Trigger: GTCATCAAAACGCTCAAGCCAGTGCCGAGAAACAGG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCCTGTTTCTCGGCACTaGCTTGAGCGTTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSPVSRH*LERFDD
Trigger: GTCATCAAAACGCTCAAGCCAGTGCCGAGAAACAGG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGAAAGCCAGGCAGGGTaGGAAACTGAAAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYESQAG*ETENLH
Trigger: GTGGAGATTTTCAGTTTCCCACCCTGCCTGGCTTTC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATATTGGGGCCAGGCAATaGAGTGCCTTAAAGAATAGG +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNIGARQ*SALKNR
Trigger: CCTATTCTTTAAGGCACTCCATTGCCTGGCCCCAAT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGGAGATCCTCCCTCCCTaGCCTCCCATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVEILPP*PPIVLG
Trigger: TCCCAGCACTATGGGAGGCCAGGGAGGGAGGATCTC...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 72 bp AGGACGTTCATTAATGGAGAACAGGAGGGAAGTCTCTaGGAAGGATTAATGCGAGCAAAGGCACAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RTFINGEQEGSL*EGLMRAKAQGC
Trigger: ACACCCTTGTGCCTTTGCTCGCATTAATCCTTCCAAGAGACTTCCCTCCTGTTCTCCATTAATGAACGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGCTGATCTCTGGGAGTaGTTTCCACCAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPADLWE*FPPMGV
Trigger: CACCCCCATTGGTGGAAATCACTCCCAGAGATCAGC...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACCTCCCATGTTCAGGTaGTTCTCCTGCCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPPPMFR*FSCLPS
Trigger: ACTTGGGAGGCAGGAGAATCACCTGAACATGGGAGG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCTGTCTTAAATACCTaGGAAACTTGGCGACGACCC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSVLNT*ETWRRP
Trigger: GGGTCGTCGCCAAGTTTCTCAGGTATTTAAGACAGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGGCTGGAAGAATTCCTaGATTCTGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYGWKNS*ILESGL
Trigger: CAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCTGTACTTCGGGGCCTaGGATGGCTTTTTCATCATT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLYFGA*DGFFII
Trigger: AATGATGAAAAAGCCATCGCAGGCCCCGAAGTACAG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCTGTACTTCGGGGCCTaGGATGGCTTTTTCATCATT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLYFGA*DGFFII
Trigger: AATGATGAAAAAGCCATCGCAGGCCCCGAAGTACAG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACCGGCATCCGAGATTTaGGCTGGATTCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGPASEI*AGFSSA
Trigger: AGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCAGGAACCTCAGTaGTTTGCTGAGCAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSQEPQ*FAEQLG
Trigger: TCCTAGCTGCTCAGCAAACCACTGAGGTTCCTGGGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420581.7
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTCTCACTTTGTTCTTaGGCCTCTGGTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSFSLCS*ASGLSL
Trigger: GAGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCAGCGTCTCATTAAACTaGAGACACCTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSVSLN*RHLMMA
Trigger: GGCCATCATGAGGTGTCTCCAGTTTAATGAGACGCT...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATAGCGTCTCATTAAACTaGAGACACCTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSVSLN*RHLMMA
Trigger: GGCCATCATGAGGTGTCTCCAGTTTAATGAGACGCT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATTCTGGAATCTGGCTTaGGTCCTCCCAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPFWNLA*VLPTAP
Trigger: GGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCAGAATTCCTGCATTCTaGAATCTGGCTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSRIPAF*NLAWVL
Trigger: GAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCT...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACGAGGTGGCGGTGGCTaGAAGAATTCCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPRGGGG*KNSCIL
Trigger: CAGAATGCAGGAATTCTTCCAGCCACCGCCACCTCG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCTTCGGGGCCTGCGATaGCTTTTTCATCATTTCACT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLRGLR*LFHHFT
Trigger: AGTGAAATGATGAAAAAGCCATCGCAGGCCCCGAAG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAGTTGGTTTTCTCGGGTaGTTCTCTGGCTTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGVGFLG*FSGFRH
Trigger: ATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAAC...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTTGGTTTTCTCGGGTaGTTCTCTGGCTTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMVGFLG*FSGFRH
Trigger: ATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAAC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGAGTGATTTCCACCAATaGGGGTGGCCTGTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSDFHQ*GWPVSR
Trigger: CCGAGAAACAGGCCACCCCCATTGGTGGAAATCACT...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGCCCCTACTTCTTCATaGCCCAAACATTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYAPTSS*PKHSAF
Trigger: AAAGGCAGAATGTTTGGGCCATGAAGAAGTAGGGGC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAACCTCAGTGGTTTGCTaGGCAGCTAGGAGTGATCAC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPTSVVC*AARSDH
Trigger: GTGATCACTCCTAGCTGCTCAGCAAACCACTGAGGT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420581.7
ENST00000489031.5
CDS-3UTR TCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAACTGGAGACACCTCATaGTGGCCACAATCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGTGDTS*WPQSLY
Trigger: GTAAAGGGATTGTGGCCATCATGAGGTGTCTCCAGT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATATCATTTCACTGCGTTaGCTAAAGGGGACATTTTGG +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNIISLR*LKGTFW
Trigger: CCAAAATGTCCCCTTTAGTCAACGCAGTGAAATGAT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCGACCCTATAAACAGTaGAGCAAACACTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSRPYKQ*SKHFSC
Trigger: ACAGCTGAAGTGTTTGCTTCACTGTTTATAGGGTCG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCAGCATGCGCCTGGATaGCTTTTCCCAATACATATA +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSQHAPG*LFPIHI
Trigger: TATATGTATTGGGAAAAGGCATCCAGGCGCATGCTG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCGCTTTGTCAGTTACCTaGTGGCAGTTGTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSALSVT*WQLFSQ
Trigger: TTGTGAGAACAACTGCCAGCAGGTAACTGACAAAGC...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGCTTTGTCAGTTACCTaGTGGCAGTTGTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYALSVT*WQLFSQ
Trigger: TTGTGAGAACAACTGCCAGCAGGTAACTGACAAAGC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGTTAGCCAAGGCAAATaGTACATTCTCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYVSQGK*YILICT
Trigger: GGTGCAGATGAGAATGTAGCATTTGCCTTGGCTAAC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCAGGAGAGTGTTGTTTaGCTTCAAAAGCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYQESVV*LQKPGY
Trigger: ATAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCTAGATGGCTCTGTTaGCTCTTACGCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSRWLC*LLRQFF
Trigger: AAAGAACTGGCGTAAGAGGCAACAGAGCCATCTAGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACTTCCAGCATGCGCCTaGATGCCTTTTCCCAATACA +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGLPACA*MPFPNT
Trigger: TGTATTGGGAAAAGGCATCCAGGCGCATGCTGGAAG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCCATCCAGGTCTGTCTaGTTTCCTGAAGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMPSRSV*FPEGLV
Trigger: TACAAGGCCTTCAGGAAACCAGACAGACCTGGATGG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTGGTTTTCTCGGGTaGTTCTCTGGCTTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPVGFLG*FSGFRH
Trigger: ATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAAC...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACCTGTTTCTCGGCACTaGCTTGAGCGTTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGPVSRH*LERFDD
Trigger: GTCATCAAAACGCTCAAGCCAGTGCCGAGAAACAGG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATTTACGCCAGTTCTTTTaGCAGTTGCACAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNLRQFF*QLHRFK
Trigger: CTTAAACCTGTGCAACTGCCAAAAGAACTGGCGTAA...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTCTTGTTCTTCTAGATaGCTCTGTTGCCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSCSSR*LCCLLR
Trigger: GCGTAAGAGGCAACAGAGCCATCTAGAAGAACAAGA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTGGAAGCAAATAAAGTaGTGCACAGTGGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYWKQIK*CTVEQR
Trigger: CCTCTGTTCCACTGTGCACCACTTTATTTGCTTCCA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475434.1
CDS-3UTR TCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGACCTCAGTGGTTTGCTaGGCAGCTAGGAGTGATCAC +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVTSVVC*AARSDH
Trigger: GTGATCACTCCTAGCTGCTCAGCAAACCACTGAGGT...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCGGATTTCACAAAGGTaGCAGGAACTCGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMRISQR*QELVPL
Trigger: AAGAGGAACGAGTTCCTGTCACCTTTGTGAAATCCG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCTTCATGCTCTTCTTaGGTCTTTTCCTCGGATTTC +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSSCSS*VFSSDF
Trigger: GAAATCCGAGGAAAAGACTCAAGAAGAGCATGAAGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCAATGTTGTTCAGGTTaGGTTCCTTCATGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYQCCSG*VPSCQD
Trigger: ATCCTGACATGAAGGAACTCAACCTGAACAACATTG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCAATGTTGTTCAGGTTaGGTTCCTTCATGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSQCCSG*VPSCQD
Trigger: ATCCTGACATGAAGGAACTCAACCTGAACAACATTG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAACTGGAGACACCTCATaGTGGCCACAATCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPTGDTS*WPQSLY
Trigger: GTAAAGGGATTGTGGCCATCATGAGGTGTCTCCAGT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCATCATTTCACTGCGTTaGCTAAAGGGGACATTTTGG +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSIISLR*LKGTFW
Trigger: CCAAAATGTCCCCTTTAGTCAACGCAGTGAAATGAT...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTGTTCCTTGAGTTGCTaGTGTTTTTGCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYCSLSC*CFCSSC
Trigger: ACAGGAAGAGCAAAAACAGCAGCAACTCAAGGAACA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTGTTCCTTGAGTTGCTaGTGTTTTTGCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSCSLSC*CFCSSC
Trigger: ACAGGAAGAGCAAAAACAGCAGCAACTCAAGGAACA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTCTGTTCCTTGAGTTaGTGCTGTTTTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSFCSLS*CCFCSS
Trigger: GGAAGAGCAAAAACAGCAGCAACTCAAGGAACAGAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGGCTGGAAGAATTCCTaGATTCTGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMGWKNS*ILESGL
Trigger: CAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATAAGCAAATAAAGTGGTaGACAGTGGAACAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYKQIKW*TVEQRS
Trigger: AGACCTCTGTTCCACTGTGCACCACTTTATTTGCTT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475434.1
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCGAAGTTTCCTGTCGGTaGCTTGTCAGTTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSEVSCR*LVSLIF
Trigger: AAAGATCAAACTGACAAGCCACCGACAGGAAACTTC...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATTTGTCAGTTACCTGCTaGCAGTTGTTCTCACAATTT +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNLSVTC*QLFSQF
Trigger: AAATTGTGAGAACAACTGCCAGCAGGTAACTGACAA...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGTTCTCACTTTGTTCTTaGGCCTCTGGTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLFSLCS*ASGLSL
Trigger: GAGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAA...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTCTCACTTTGTTCTTaGGCCTCTGGTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMFSLCS*ASGLSL
Trigger: GAGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACCATCCAGGTCTGTCTaGTTTCCTGAAGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPPSRSV*FPEGLV
Trigger: TACAAGGCCTTCAGGAAACCAGACAGACCTGGATGG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGAGCGTCTCATTAAACTaGAGACACCTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSVSLN*RHLMMA
Trigger: GGCCATCATGAGGTGTCTCCAGTTTAATGAGACGCT...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAAGAATTCCTGCATTCTaGAATCTGGCTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGRIPAF*NLAWVL
Trigger: GAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACTTCGGGGCCTGCGATaGCTTTTTCATCATTTCACT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGLRGLR*LFHHFT
Trigger: AGTGAAATGATGAAAAAGCCATCGCAGGCCCCGAAG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAATCCGAGATTTGCGCTaGATTCTCTTCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGIRDLR*ILFSFT
Trigger: GGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGAT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTACGCCAGTTCTTTTaGCAGTTGCACAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLRQFF*QLHRFK
Trigger: CTTAAACCTGTGCAACTGCCAAAAGAACTGGCGTAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGCCCCTACTTCTTCATaGCCCAAACATTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMAPTSS*PKHSAF
Trigger: AAAGGCAGAATGTTTGGGCCATGAAGAAGTAGGGGC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAGCCCCTACTTCTTCATaGCCCAAACATTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGAPTSS*PKHSAF
Trigger: AAAGGCAGAATGTTTGGGCCATGAAGAAGTAGGGGC...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGACAGGATTAGTAAATTaGGGCCAGGCAATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMTGLVN*GQAMEC
Trigger: GCACTCCATTGCCTGGCCCCAATTTACTAATCCTGT...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACGGATTTCACAAAGGTaGCAGGAACTCGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPRISQR*QELVPL
Trigger: AAGAGGAACGAGTTCCTGTCACCTTTGTGAAATCCG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCTCTTCCCTACAAGGTaGGTGTGGAAGCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLFPTR*VWKQIK
Trigger: CTTTATTTGCTTCCACACTCACCTTGTAGGGAAGAG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475434.1
CDS-3UTR GCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCACTTCCATTTCCGACTaGAGTTCTTTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSTSISD*SSFSSS
Trigger: TGAAGAACTGAAAGAACTGCAGTCGGAAATGGAAGT...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATACTTCCATTTCCGACTaGAGTTCTTTCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYTSISD*SSFSSS
Trigger: TGAAGAACTGAAAGAACTGCAGTCGGAAATGGAAGT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCAGCATGCGCCTGGATaGCTTTTCCCAATACATATA +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMQHAPG*LFPIHI
Trigger: TATATGTATTGGGAAAAGGCATCCAGGCGCATGCTG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCTCTGTTCTTTGAATaGTTTGTCAGTTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSLFFE*FVSYLL
Trigger: CAGCAGGTAACTGACAAAGCATTCAAAGAACAGAGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTTAGCCAAGGCAAATaGTACATTCTCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMVSQGK*YILICT
Trigger: GGTGCAGATGAGAATGTAGCATTTGCCTTGGCTAAC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACAGGAGAGTGTTGTTTaGCTTCAAAAGCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGQESVV*LQKPGY
Trigger: ATAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCAGGAGAGTGTTGTTTaGCTTCAAAAGCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMQESVV*LQKPGY
Trigger: ATAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGAGTTGCTGCTGTTTTTaGTCTTCCTGTCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSCCCF*SSCRFC
Trigger: GCAGAAACGACAGGAAGAGCAAAAACAGCAGCAACT...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGTCTAGATGGCTCTGTTaGCTCTTACGCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLSRWLC*LLRQFF
Trigger: AAAGAACTGGCGTAAGAGGCAACAGAGCCATCTAGA...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCTTCAGCAGACAAGTTaGCCAAGATTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLQQTS*PRFHLH
Trigger: ATGAAGATGAAATCTTGGCCAACTTGTCTGCTGAAG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCTTCAGCAGACAAGTTaGCCAAGATTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLQQTS*PRFHLH
Trigger: ATGAAGATGAAATCTTGGCCAACTTGTCTGCTGAAG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTTGTCAGTTACCTGCTaGCAGTTGTTCTCACAATTT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLSVTC*QLFSQF
Trigger: AAATTGTGAGAACAACTGCCAGCAGGTAACTGACAA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTGCCTTCAAAAGCCTaGCTATTTCCATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLPSKA*LFPFQH
Trigger: ATGCTGAAATGGAAATAGCCAGGCTTTTGAAGGCAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACTTCGGGGCCTGCGATaGCTTTTTCATCATTTCACT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPLRGLR*LFHHFT
Trigger: AGTGAAATGATGAAAAAGCCATCGCAGGCCCCGAAG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAATCCGAGATTTGCGCTaGATTCTCTTCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPIRDLR*ILFSFT
Trigger: GGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGAT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCTTGTTCTTCTAGATaGCTCTGTTGCCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSCSSR*LCCLLR
Trigger: GCGTAAGAGGCAACAGAGCCATCTAGAAGAACAAGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCTTGTTCTTCTAGATaGCTCTGTTGCCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSCSSR*LCCLLR
Trigger: GCGTAAGAGGCAACAGAGCCATCTAGAAGAACAAGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAAGGCCTCTAGGAACTTaGAAGAAGGACAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPRPLGT*KKDRLE
Trigger: CTCCAATCTGTCCTTCTTCCAAGTTCCTAGAGGCCT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATGCCAGTAGTCAATTCTaGAAGGGTAATAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNASSQF*KGNNRK
Trigger: TTTTCTGTTATTACCCTTCCAGAATTGACTACTGGC...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACAAGAGATTTATGATTaGAGTTTCCTGTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGQEIYD*SFLSVA
Trigger: AGCCACCGACAGGAAACTTCAATCATAAATCTCTTG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCAAGAGATTTATGATTaGAGTTTCCTGTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMQEIYD*SFLSVA
Trigger: AGCCACCGACAGGAAACTTCAATCATAAATCTCTTG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCTTCATGCTCTTCTTaGGTCTTTTCCTCGGATTTC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSSCSS*VFSSDF
Trigger: GAAATCCGAGGAAAAGACTCAAGAAGAGCATGAAGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCTTCATGCTCTTCTTaGGTCTTTTCCTCGGATTTC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSSCSS*VFSSDF
Trigger: GAAATCCGAGGAAAAGACTCAAGAAGAGCATGAAGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAATCATTTCACTGCGTTaGCTAAAGGGGACATTTTGG +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGIISLR*LKGTFW
Trigger: CCAAAATGTCCCCTTTAGTCAACGCAGTGAAATGAT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCACTCTAAATTTCACCTaGGTCACTCAAATTGATTGC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSTLNFT*VTQIDC
Trigger: GCAATCAATTTGAGTGACTCAGGTGAAATTTAGAGT...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTATGTGCTAGACACTTaGAGTTTTGTTTGTTACAGC +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSYVLDT*SFVCYS
Trigger: GCTGTAACAAACAAAACTTCAAGTGTCTAGCACATA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGCTGTTTCTTGGATATTaGTGCTGCCCTTTGATTCTC +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLLFLGY*CCPLIL
Trigger: GAGAATCAAAGGGCAGCAGCAATATCCAAGAAACAG...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCTGTTTCTTGGATATTaGTGCTGCCCTTTGATTCTC +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLFLGY*CCPLIL
Trigger: GAGAATCAAAGGGCAGCAGCAATATCCAAGAAACAG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCTAATTTGTTCCTTTaGTTTGCCTTCCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSNLFL*FAFLFS
Trigger: AGAGAAGAGGAAGGCAAAGCAAAGGAACAAATTAGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGCTTTGTCAGTTACCTaGTGGCAGTTGTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPALSVT*WQLFSQ
Trigger: TTGTGAGAACAACTGCCAGCAGGTAACTGACAAAGC...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAAGTTGCTGCTGTTTTTaGTCTTCCTGTCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSCCCF*SSCRFC
Trigger: GCAGAAACGACAGGAAGAGCAAAAACAGCAGCAACT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATTCTGTTCCTTGAGTTaGTGCTGTTTTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGFCSLS*CCFCSS
Trigger: GGAAGAGCAAAAACAGCAGCAACTCAAGGAACAGAA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGCTGTACTTCGGGGCCTaGGATGGCTTTTTCATCATT +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVLYFGA*DGFFII
Trigger: AATGATGAAAAAGCCATCGCAGGCCCCGAAGTACAG...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATCTAGATGGCTCTGTTaGCTCTTACGCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSRWLC*LLRQFF
Trigger: AAAGAACTGGCGTAAGAGGCAACAGAGCCATCTAGA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATATGGCCCAAACATTCTaGCTTTTACAAATACCCTTA +
Preference number: 4 (lower is better)
Translates to: PLSDGSIVSSSATWILKYMAQTF*LLQIPL
Trigger: TAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCAT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGAGGTGCCTGCCATCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLRCLPS*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGATGGCAGGCACCT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATAAAACCCTCTTACTGTaGATTTTGAAATTCCTGACT +
Preference number: 4 (lower is better)
Translates to: ALRNNPSISKHQKGQELNKTLLL*ILKFLT
Trigger: AGTCAGGAATTTCAAAATGCACAGTAAGAGGGTTTT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGAGAATTCCTGCATTCTaGAATCTGGCTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVRIPAF*NLAWVL
Trigger: GAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCT...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTACGCCAGTTCTTTTaGCAGTTGCACAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLRQFF*QLHRFK
Trigger: CTTAAACCTGTGCAACTGCCAAAAGAACTGGCGTAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTTTCACCATGTTCTGTaGCTTACGTGTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVFHHVL*LTCSAP
Trigger: AGGGGCAGAACACGTAAGCCACAGAACATGGTGAAA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCTGCTTCACCTCTTTTaGCAAAACCTGTGTATTGAG +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLLHLF*QNLCIE
Trigger: CTCAATACACAGGTTTTGCCAAAAGAGGTGAAGCAG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACAAGAGATTTATGATTaGAGTTTCCTGTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPQEIYD*SFLSVA
Trigger: AGCCACCGACAGGAAACTTCAATCATAAATCTCTTG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACAATGTTGTTCAGGTTaGGTTCCTTCATGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPQCCSG*VPSCQD
Trigger: ATCCTGACATGAAGGAACTCAACCTGAACAACATTG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAACTGAAAATCTCCACTaGTTCTGCAGAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPTENLH*FCREAL
Trigger: TAGAGCTTCTCTGCAGAATCAGTGGAGATTTTCAGT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAATCCAACCAGCAACCTaGGTTGTTTCTGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPIQPAT*VVSEVK
Trigger: CTTTACTTCAGAAACAACTCAGGTTGCTGGTTGGAT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475434.1
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACTGTTTCTTGGATATTaGTGCTGCCCTTTGATTCTC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPLFLGY*CCPLIL
Trigger: GAGAATCAAAGGGCAGCAGCAATATCCAAGAAACAG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATCTATAAAAACAGCATaGTGTCTCCCATTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSIKTA*CLPLSL
Trigger: GAGGGACAATGGGAGACAGCATGCTGTTTTTATAGA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCTTCATCTGTTTCTTaGATATTGCTGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSSSVS*ILLLPF
Trigger: AAAGGGCAGCAGCAATATCCAAGAAACAGATGAAGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTGTCAGTTACCTGCTaGCAGTTGTTCTCACAATTT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLSVTC*QLFSQF
Trigger: AAATTGTGAGAACAACTGCCAGCAGGTAACTGACAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCCAGTAACATTTCTTTaGGGATGTTTTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSPVTFL*GCFQCC
Trigger: ACAACATTGAAAACATCCCCAAAGAAATGTTACTGG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATTGCCTTCAAAAGCCTaGCTATTTCCATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGLPSKA*LFPFQH
Trigger: ATGCTGAAATGGAAATAGCCAGGCTTTTGAAGGCAA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTGCCTTCAAAAGCCTaGCTATTTCCATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLPSKA*LFPFQH
Trigger: ATGCTGAAATGGAAATAGCCAGGCTTTTGAAGGCAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGCTTGGATATTGCTGCTaGCCTTTGATTCTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLLGYCC*PLILFY
Trigger: ATAAAAGAGAATCAAAGGGCAGCAGCAATATCCAAG...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGACTTGGATATTGCTGCTaGCCTTTGATTCTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGLGYCC*PLILFY
Trigger: ATAAAAGAGAATCAAAGGGCAGCAGCAATATCCAAG...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTTCTTGGATATTGCTaGTGCCCTTTGATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMFLGYC*CPLILF
Trigger: AAAGAGAATCAAAGGGCAGCAGCAATATCCAAGAAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCTAATTTGTTCCTTTaGTTTGCCTTCCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSNLFL*FAFLFS
Trigger: AGAGAAGAGGAAGGCAAAGCAAAGGAACAAATTAGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATCTCTGTTCTTTGAATaGTTTGTCAGTTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSLFFE*FVSYLL
Trigger: CAGCAGGTAACTGACAAAGCATTCAAAGAACAGAGA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGATGGCCCAAACATTCTaGCTTTTACAAATACCCTTA +
Preference number: 4 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLMAQTF*LLQIPL
Trigger: TAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCAT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACTTCAGCAGACAAGTTaGCCAAGATTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPLQQTS*PRFHLH
Trigger: ATGAAGATGAAATCTTGGCCAACTTGTCTGCTGAAG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATCTTCATCTGTTTCTTaGATATTGCTGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSSSVS*ILLLPF
Trigger: AAAGGGCAGCAGCAATATCCAAGAAACAGATGAAGA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTACCTTCAAAAAGCTaGTGTCTAGAGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLPSKS*CLELTS
Trigger: AGAAGTTAGCTCTAGACACCAGCTTTTTGAAGGTAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAACTCTAAATTTCACCTaGGTCACTCAAATTGATTGC +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPTLNFT*VTQIDC
Trigger: GCAATCAATTTGAGTGACTCAGGTGAAATTTAGAGT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR TCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAAGAAAAAGCATAATGTaGACTGCTTCACCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPRKSIM*TASPLL
Trigger: CAAAAGAGGTGAAGCAGTTCACATTATGCTTTTTCT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATTTCTTGGATATTGCTaGTGCCCTTTGATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPFLGYC*CPLILF
Trigger: AAAGAGAATCAAAGGGCAGCAGCAATATCCAAGAAA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR GCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTCTCTGTTCTTTGAATaGTTTGTCAGTTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVSLFFE*FVSYLL
Trigger: CAGCAGGTAACTGACAAAGCATTCAAAGAACAGAGA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTCTTCATCTGTTTCTTaGATATTGCTGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVSSSVS*ILLLPF
Trigger: AAAGGGCAGCAGCAATATCCAAGAAACAGATGAAGA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCCAGTAACATTTCTTTaGGGATGTTTTCAATGTTGT +
Preference number: 4 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMPVTFL*GCFQCC
Trigger: ACAACATTGAAAACATCCCCAAAGAAATGTTACTGG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
3UTR CAA 72 bp GAGTTTAGCCTCTTAGATGTAGTATGTGCTAGACACTaGAAGTTTTGTTTGTTACAGCCCTTTCTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: EFSLLDVVCARH*KFCLLQPFLSY
Trigger: ATAGCTAAGAAAGGGCTGTAACAAACAAAACTTCAAGTGTCTAGCACATACTACATCTAAGAGGCTAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR GCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTTTCTTGGATATTGCTaGTGCCCTTTGATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVFLGYC*CPLILF
Trigger: AAAGAGAATCAAAGGGCAGCAGCAATATCCAAGAAA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CCA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTTACCTTCAAAAAGCTaGTGTCTAGAGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: FGLIHATYDNIKGERRQVLPSKS*CLELTS
Trigger: AGAAGTTAGCTCTAGACACCAGCTTTTTGAAGGTAA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 72 bp TTTTGTTTGTTACAGCCCTTTCTTAGCTATCCTGCTTaGTATGCAAGGATGTTTTCTAGAAATATTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FCLLQPFLSYPA*YARMFSRNIEG
Trigger: CCCTTCAATATTTCTAGAAAACATCCTTGCATACAAAGCAGGATAGCTAAGAAAGGGCTGTAACAAACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
3UTR CAA 72 bp TTAGATGTAGTATGTGCTAGACACTTGAAGTTTTGTTaGTTACAGCCCTTTCTTAGCTATCCTGCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LDVVCARHLKFC*LQPFLSYPALY
Trigger: ATACAAAGCAGGATAGCTAAGAAAGGGCTGTAACAAACAAAACTTCAAGTGTCTAGCACATACTACATCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS CCA 90 bp AGGCCGAGGTGGCGGTGGCTGGAAGAATTCCTGCATTCTGGAATCTaGCTTGGGTCCTCCCAACAGCTCCCACATCCCAGGGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RPRWRWLEEFLHSGI*LGSSQQLPHPRGQP
Trigger: GGGCTGCCCCCTGGGATGTGGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCCACCGCCACCTCGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 90 bp GAGGTGGCGGTGGCTGGAAGAATTCCTGCATTCTGGAATCTGGCTTaGGTCCTCCCAACAGCTCCCACATCCCAGGGGGCAGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: EVAVAGRIPAFWNLA*VLPTAPTSQGAAPT
Trigger: GGTTGGGGCTGCCCCCTGGGATGTGGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCCACCGCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 90 bp GGTTGGGAGGCCGAGGTGGCGGTGGCTGGAAGAATTCCTGCATTCTaGAATCTGGCTTGGGTCCTCCCAACAGCTCCCACATCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: GWEAEVAVAGRIPAF*NLAWVLPTAPTSQG
Trigger: CCCCTGGGATGTGGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCCACCGCCACCTCGGCCTCCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS GCA 90 bp GGTTGGTTTTCTCGGGTGGTTCTCTGGCTTCCGGCATCCGAGATTTaGGCTGGATTCTCTTCAGCTTCACCACCCGGAAGGAGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GWFSRVVLWLPASEI*AGFSSASPPGRSQG
Trigger: ACCCTGACTCCTTCCGGGTGGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 90 bp GTTTTCTCGGGTGGTTCTCTGGCTTCCGGCATCCGAGATTTGCGCTaGATTCTCTTCAGCTTCACCACCCGGAAGGAGTCAGGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: VFSGGSLASGIRDLR*ILFSFTTRKESGSV
Trigger: GACAGACCCTGACTCCTTCCGGGTGGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCGGGACATTTTGGGGGTaGGGAGGCCGAGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSGTFWG*GGRGGG
Trigger: ACCGCCACCTCGGCCTCCCAACCCCCAAAATGTCCC...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGGGGACATTTTGGGGGTaGGGAGGCCGAGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLGTFWG*GGRGGG
Trigger: ACCGCCACCTCGGCCTCCCAACCCCCAAAATGTCCC...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS CCA 90 bp TGGCTTGAGCGTTTTGATGACATCTTTGAGGTTGGTTTTCTCGGGTaGTTCTCTGGCTTCCGGCATCCGAGATTTGCGCTGGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: WLERFDDIFEVGFLG*FSGFRHPRFALDSL
Trigger: AAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAACCTCAAAGATGTCATCAAAACGCTCAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGGGACATTTTGGGGGTaGGGAGGCCGAGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPGTFWG*GGRGGG
Trigger: ACCGCCACCTCGGCCTCCCAACCCCCAAAATGTCCC...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCATTCTGGAATCTGGCTaGGGTCCTCCCAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSILESG*GPPNSS
Trigger: GGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAAT...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATATTCTGGAATCTGGCTaGGGTCCTCCCAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYILESG*GPPNSS
Trigger: GGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAAT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTCCGGCATCCGAGATTaGCGCTGGATTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSGIRD*RWILFS
Trigger: GCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCAGTTCTTTTGGCAGTaGCACAGGTTTAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: PGVEDWVGRSLMENRREVQFFWQ*HRFKIG
Trigger: GCCTATCTTAAACCTGTGCAACTGCCAAAAGAACTG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATTACAGTGACGTGATCTaGTCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNYSDVI*SHCNLC
Trigger: GCAGAGGTTGCAGTGAGACAAGATCACGTCACTGTA...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGATTCTGGAATCTGGCTaGGGTCCTCCCAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLILESG*GPPNSS
Trigger: GGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAAT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCCGGCATCCGAGATTaGCGCTGGATTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSGIRD*RWILFS
Trigger: GCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCGACAGGATTAGTAAATaGGGGCCAGGCAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSDRISK*GPGNGV
Trigger: CACTCCATTGCCTGGCCCCAATTTACTAATCCTGTC...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCTGGAAGAAGGACAGATaGGAGTTGTCTGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: PGVEDWVGRSLMENRREVWKKDR*ELSGKF
Trigger: AAATTTTCCAGACAACTCCAATCTGTCCTTCTTCCA...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATAAGGCCTCTAGGAACTaGGAAGAAGGACAGATTGGA +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNKASRN*EEGQIG
Trigger: TCCAATCTGTCCTTCTTCCAAGTTCCTAGAGGCCTT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCTTAGCTATCCTGCTTaGTATGCAAGGATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PGVEDWVGRSLMENRREVLSYPA*YARMFS
Trigger: AGAAAACATCCTTGCATACAAAGCAGGATAGCTAAG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCGGGAGTTGAAGACTGGGTAGGACGTTCATTAATGGAGAACAGGAGGGAAGTCCACTTGAAGTTTTGTTaGTTACAGCCCTTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: PGVEDWVGRSLMENRREVHLKFC*LQPFLS
Trigger: GCTAAGAAAGGGCTGTAACAAACAAAACTTCAAGTG...GACTTCCCTCCTGTTCTCCATTAATGAACGTCCTACCCAGTCTTCAACTCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTTCTCACTTTGTTCTaGGGCCTCTGGTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSFLTLF*GLWSVS
Trigger: AGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTTTCTCACTTTGTTCTaGGGCCTCTGGTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYFLTLF*GLWSVS
Trigger: AGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAAA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCAGGAGAGTGTTGTTaGCCTTCAAAAGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSGECC*PSKAWL
Trigger: TAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTCAGGAGAGTGTTGTTaGCCTTCAAAAGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSGECC*PSKAWL
Trigger: TAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTGA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATCTGTCGTTTCTGCCTTaGTTTATCCTGATTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNLSFLP*FILIPG
Trigger: ACCAGGAATCAGGATAAACAAAGGCAGAAACGACAG...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATCTTCTGTTCCTTGAGTaGCTGCTGTTTTTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNLLFLE*LLFLLF
Trigger: GAAGAGCAAAAACAGCAGCAACTCAAGGAACAGAAG...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATCCGGCATCCGAGATTaGCGCTGGATTCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSGIRD*RWILFS
Trigger: GCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATATGACATCTTTGAGGTaGGTTTTCTCGGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNMTSLR*VFSGGS
Trigger: AGAACCACCCGAGAAAACCAACCTCAAAGATGTCAT...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTTTCTCGGCACTGGCTaGAGCGTTTTGATGACATCT +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYFLGTG*SVLMTS
Trigger: AGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCGGTGGCTTGTCAGTTaGATCTTTCTGAATCATTCC +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSRWLVS*IFLNHS
Trigger: GGAATGATTCAGAAAGATCAAACTGACAAGCCACCG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCGGTTTCCTGAAGGCCTaGTACTTACCTTCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSGFLKA*YLPSKS
Trigger: GCTTTTTGAAGGTAAGTACAAGGCCTTCAGGAAACC...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGGTTTCCTGAAGGCCTaGTACTTACCTTCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYGFLKA*YLPSKS
Trigger: GCTTTTTGAAGGTAAGTACAAGGCCTTCAGGAAACC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATTCAATGTTGTTCAGGTaGAGTTCCTTCATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNSMLFR*SSFMSG
Trigger: TCCTGACATGAAGGAACTCAACCTGAACAACATTGA...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATATCTTCAGGAGAGTGTaGTTTGCCTTCAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYIFRRV*FAFKSL
Trigger: CAGGCTTTTGAAGGCAAACAACACTCTCCTGAAGAT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCTGTCGTTTCTGCCTTaGTTTATCCTGATTCCTGGT +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLSFLP*FILIPG
Trigger: ACCAGGAATCAGGATAAACAAAGGCAGAAACGACAG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATGTTTTGATGACATCTTaGAGGTTGGTTTTCTCGGGT +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNVLMTS*RLVFSG
Trigger: ACCCGAGAAAACCAACCTCAAAGATGTCATCAAAAC...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATACTGGCTTGAGCGTTTaGATGACATCTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYTGLSV*MTSLRL
Trigger: CAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCAGTTCTTTTGGCAGTaGCACAGGTTTAAGATAGGC +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSQFFWQ*HRFKIG
Trigger: GCCTATCTTAAACCTGTGCAACTGCCAAAAGAACTG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp GCTCTAAGGAACAATCCTTCCATTTCAAAGCATCAGAAGGGCCAGGAGCTCAATCCTAGCCTGTTTGGTTaGATACATGCCACTTATGAT +
Preference number: 5 (lower is better)
Translates to: ALRNNPSISKHQKGQELNPSLFG*IHATYD
Trigger: ATCATAAGTGGCATGTATCAAACCAAACAGGCTAGG...ATTGAGCTCCTGGCCCTTCTGATGCTTTGAAATGGAAGGATTGTTCCTTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS TCA 90 bp TTTTCTCACTTTGTTCTTGGGCCTCTGGTCTGTCTCTCTGTTCTTTaGATGCTTTGTCAGTTACCTGCTGGCAGTTGTTCTCACAATTTC +
Preference number: 5 (lower is better)
Translates to: FSHFVLGPLVCLSVL*MLCQLPAGSCSHNF
Trigger: GAAATTGTGAGAACAACTGCCAGCAGGTAACTGACAAAGCATTCAAAGAACAGAGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTCTGTTTCTTGGATATaGCTGCTGCCCTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSVSWI*LLPFDS
Trigger: AGAATCAAAGGGCAGCAGCAATATCCAAGAAACAGA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTCTTCATCTGTTTCTaGGATATTGCTGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSFFICF*DIAAAL
Trigger: AAGGGCAGCAGCAATATCCAAGAAACAGATGAAGAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATATTTGTTCCTTTGCTTaGCCTTCCTCTTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYICSFA*PSSSLF
Trigger: GAACAGAGAAGAGGAAGGCAAAGCAAAGGAACAAAT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATCTGTCTCTCTGTTCTTaGAATGCTTTGTCAGTTACC +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYLSLCS*NALSVT
Trigger: GGTAACTGACAAAGCATTCAAAGAACAGAGAGACAG...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTCAATGTTGTTCAGGTaGAGTTCCTTCATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSMLFR*SSFMSG
Trigger: TCCTGACATGAAGGAACTCAACCTGAACAACATTGA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTCATCTGCACCCACATaGGCTAAACTGAATGTTTTG +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSSSAPT*AKLNVL
Trigger: CAAAACATTCAGTTTAGCCAATGTGGGTGCAGATGA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCATCTGCACCCACATaGGCTAAACTGAATGTTTTG +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSSAPT*AKLNVL
Trigger: CAAAACATTCAGTTTAGCCAATGTGGGTGCAGATGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATAAATTGGACTCGATGTaGAGAGTGGTGATGCTTCTA +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYKLDSM*RVVMLL
Trigger: TAGAAGCATCACCACTCTCAACATCGAGTCCAATTT...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTTACCTGTGATGAAATaGGACTCGATGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSLPVMK*DSMLRV
Trigger: CACTCTCAACATCGAGTCCAATTTCATCACAGGTAA...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCCATCATTTCACTGCGTaGACTAAAGGGGACATTTTG +
Preference number: 5 (lower is better)
Translates to: YKYPYQMVALFPVLPRGSHHFTA*TKGDIL
Trigger: CAAAATGTCCCCTTTAGTCAACGCAGTGAAATGATG...GGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGTTTTGATGACATCTTaGAGGTTGGTTTTCTCGGGT +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYVLMTS*RLVFSG
Trigger: ACCCGAGAAAACCAACCTCAAAGATGTCATCAAAAC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATTTCTCGGCACTGGCTaGAGCGTTTTGATGACATCT +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGFLGTG*SVLMTS
Trigger: AGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACAGGAGGGAAGTCTCTaGGAAGGATTAATGCGAGCA +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPQEGSL*EGLMRA
Trigger: TGCTCGCATTAATCCTTCCAAGAGACTTCCCTCCTG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCGGTGGCTTGTCAGTTaGATCTTTCTGAATCATTCC +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMRWLVS*IFLNHS
Trigger: GGAATGATTCAGAAAGATCAAACTGACAAGCCACCG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTTCTTCATGCTCTTCTaGAGTCTTTTCCTCGGATTT +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYFFMLF*SLFLGF
Trigger: AAATCCGAGGAAAAGACTCAAGAAGAGCATGAAGAA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATGTTACCTGCTGGCAGTaGTTCTCACAATTTCTAATT +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYVTCWQ*FSQFLI
Trigger: AATTAGAAATTGTGAGAACAACTGCCAGCAGGTAAC...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATGTTCTTTGAATGCTTaGTCAGTTACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGCSLNA*SVTCWQ
Trigger: CTGCCAGCAGGTAACTGACAAAGCATTCAAAGAACA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTGTTCTTTGAATGCTTaGTCAGTTACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMCSLNA*SVTCWQ
Trigger: CTGCCAGCAGGTAACTGACAAAGCATTCAAAGAACA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATTTCTCACTTTGTTCTaGGGCCTCTGGTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPFLTLF*GLWSVS
Trigger: AGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAAA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGGGTTTCCTGAAGGCCTaGTACTTACCTTCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLGFLKA*YLPSKS
Trigger: GCTTTTTGAAGGTAAGTACAAGGCCTTCAGGAAACC...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGATCTTCAGGAGAGTGTaGTTTGCCTTCAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLIFRRV*FAFKSL
Trigger: CAGGCTTTTGAAGGCAAACAACACTCTCCTGAAGAT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCTTCTGTTCCTTGAGTaGCTGCTGTTTTTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLLFLE*LLFLLF
Trigger: GAAGAGCAAAAACAGCAGCAACTCAAGGAACAGAAG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGATGACATCTTTGAGGTaGGTTTTCTCGGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMMTSLR*VFSGGS
Trigger: AGAACCACCCGAGAAAACCAACCTCAAAGATGTCAT...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAACTGGCTTGAGCGTTTaGATGACATCTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGTGLSV*MTSLRL
Trigger: CAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATTTCTCGGCACTGGCTaGAGCGTTTTGATGACATCT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPFLGTG*SVLMTS
Trigger: AGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCTGTTTCTTGGATATaGCTGCTGCCCTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSVSWI*LLPFDS
Trigger: AGAATCAAAGGGCAGCAGCAATATCCAAGAAACAGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCTGTTTCTTGGATATaGCTGCTGCCCTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSVSWI*LLPFDS
Trigger: AGAATCAAAGGGCAGCAGCAATATCCAAGAAACAGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTTCTTCATCTGTTTCTaGGATATTGCTGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMFFICF*DIAAAL
Trigger: AAGGGCAGCAGCAATATCCAAGAAACAGATGAAGAA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGATTTGTTCCTTTGCTTaGCCTTCCTCTTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLICSFA*PSSSLF
Trigger: GAACAGAGAAGAGGAAGGCAAAGCAAAGGAACAAAT...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAATTTGTTCCTTTGCTTaGCCTTCCTCTTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGICSFA*PSSSLF
Trigger: GAACAGAGAAGAGGAAGGCAAAGCAAAGGAACAAAT...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATGTTCTTTGAATGCTTaGTCAGTTACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPCSLNA*SVTCWQ
Trigger: CTGCCAGCAGGTAACTGACAAAGCATTCAAAGAACA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGAGGGATGTTTTCAATGTaGTTCAGGTTGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGGMFSM*FRLSSF
Trigger: GAAGGAACTCAACCTGAACAACATTGAAAACATCCC...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCTAAAGTATTCCAGTAACATTTCTTaGGGGATGTTTTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: PLSDGSIVSSSATWILKYSSNIS*GMFSML
Trigger: CAACATTGAAAACATCCCCAAAGAAATGTTACTGGA...ATACTTTAGGATCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGTCATCTGCACCCACATaGGCTAAACTGAATGTTTTG +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLSSAPT*AKLNVL
Trigger: CAAAACATTCAGTTTAGCCAATGTGGGTGCAGATGA...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATTACCTGTGATGAAATaGGACTCGATGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGLPVMK*DSMLRV
Trigger: CACTCTCAACATCGAGTCCAATTTCATCACAGGTAA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTCAGGAGAGTGTTGTTaGCCTTCAAAAGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: FGLIHATYDNIKGERRQVSGECC*PSKAWL
Trigger: TAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTGA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAATCTTCAGGAGAGTGTaGTTTGCCTTCAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPIFRRV*FAFKSL
Trigger: CAGGCTTTTGAAGGCAAACAACACTCTCCTGAAGAT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACTGTCGTTTCTGCCTTaGTTTATCCTGATTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPLSFLP*FILIPG
Trigger: ACCAGGAATCAGGATAAACAAAGGCAGAAACGACAG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAATGACATCTTTGAGGTaGGTTTTCTCGGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPMTSLR*VFSGGS
Trigger: AGAACCACCCGAGAAAACCAACCTCAAAGATGTCAT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTTTTGATGACATCTTaGAGGTTGGTTTTCTCGGGT +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMVLMTS*RLVFSG
Trigger: ACCCGAGAAAACCAACCTCAAAGATGTCATCAAAAC...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAACTGGCTTGAGCGTTTaGATGACATCTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPTGLSV*MTSLRL
Trigger: CAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGCGGTGGCTTGTCAGTTaGATCTTTCTGAATCATTCC +
Preference number: 5 (lower is better)
Translates to: FGLIHATYDNIKGERRQVRWLVS*IFLNHS
Trigger: GGAATGATTCAGAAAGATCAAACTGACAAGCCACCG...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACTGTCTCTCTGTTCTTaGAATGCTTTGTCAGTTACC +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPLSLCS*NALSVT
Trigger: GGTAACTGACAAAGCATTCAAAGAACAGAGAGACAG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATCAATGTTGTTCAGGTaGAGTTCCTTCATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPSMLFR*SSFMSG
Trigger: TCCTGACATGAAGGAACTCAACCTGAACAACATTGA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAAAATTGGACTCGATGTaGAGAGTGGTGATGCTTCTA +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPKLDSM*RVVMLL
Trigger: TAGAAGCATCACCACTCTCAACATCGAGTCCAATTT...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATTACCTGTGATGAAATaGGACTCGATGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPLPVMK*DSMLRV
Trigger: CACTCTCAACATCGAGTCCAATTTCATCACAGGTAA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCACATCATTTCACTGCGTaGACTAAAGGGGACATTTTG +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPHHFTA*TKGDIL
Trigger: CAAAATGTCCCCTTTAGTCAACGCAGTGAAATGATG...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGCTAAGATCTTTAGGGTaGGGTGGTAGAAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMLRSLG*GGRKSI
Trigger: TATGCTTTTTCTACCACCCAACCCTAAAGATCTTAG...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS CCA 90 bp ATACATATAATCAACAAGAGATTTATGATTGAAGTTTCCTGTCGGTaGCTTGTCAGTTTGATCTTTCTGAATCATTCCCACGGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: IHIINKRFMIEVSCR*LVSLIFLNHSHGKA
Trigger: AGCCTTCCCGTGGGAATGATTCAGAAAGATCAAACTGACAAGCCACCGACAGGAAACTTCAATCATAAATCTCTTGTTGATTATATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCATTCTTCATGCTCTTCTaGAGTCTTTTCCTCGGATTT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPFFMLF*SLFLGF
Trigger: AAATCCGAGGAAAAGACTCAAGAAGAGCATGAAGAA...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp AACACATATGAGCGTGTGTGTGTGTGTGTGTATTTAGCCAAAACCAAAAGCTTGTATTGCTGCTGCCCTTaGATTCTCTTTTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: NTYERVCVCVYLAKTKSLYCCCP*ILFYLQ
Trigger: TTGCAAATAAAAGAGAATCAAAGGGCAGCAGCAATA...CAAGCTTTTGGTTTTGGCTAAATACACACACACACACACACGCTCATATGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTATTGCTGCTGCCCTTaGATTCTCTTTTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMYCCCP*ILFYLQ
Trigger: TTGCAAATAAAAGAGAATCAAAGGGCAGCAGCAATA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATATTGCTGCTGCCCTTaGATTCTCTTTTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGYCCCP*ILFYLQ
Trigger: TTGCAAATAAAAGAGAATCAAAGGGCAGCAGCAATA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGTTCTTCATCTGTTTCTaGGATATTGCTGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: FGLIHATYDNIKGERRQVFFICF*DIAAAL
Trigger: AAGGGCAGCAGCAATATCCAAGAAACAGATGAAGAA...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp CCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTACCTGCTGGCAGTaGTTCTCACAATTTCTAATT +
Preference number: 5 (lower is better)
Translates to: PKHSAFYKYPYQMVALFPVTCWQ*FSQFLI
Trigger: AATTAGAAATTGTGAGAACAACTGCCAGCAGGTAAC...TGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTGGTTTGATACATGCCACTTATGATAACATAAAAGGAGAAAGAAGGCAGGTGGGGATGTTTTCAATGTaGTTCAGGTTGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FGLIHATYDNIKGERRQVGMFSM*FRLSSF
Trigger: GAAGGAACTCAACCTGAACAACATTGAAAACATCCC...CACCTGCCTTCTTTCTCCTTTTATGTTATCATAAGTGGCATGTATCAAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATCCAGTAACATTTCTTaGGGGATGTTTTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGSSNIS*GMFSML
Trigger: CAACATTGAAAACATCCCCAAAGAAATGTTACTGGA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp CCTACTTCTTCATGGCCCAAACATTCTGCCTTTTACAAATACCCTTATCAGATGTCCAGTAACATTTCTTaGGGGATGTTTTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: PTSSWPKHSAFYKYPYQMSSNIS*GMFSML
Trigger: CAACATTGAAAACATCCCCAAAGAAATGTTACTGGA...CATCTGATAAGGGTATTTGTAAAAGGCAGAATGTTTGGGCCATGAAGAAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS-3UTR CAA 90 bp TTTTACAAATACCCTTATCAGATGGTAGCATTGTTTCCAGTTCTGCCACGTGGATTTCTTTCCCATGGCTaGTCTTTCCAAATAATGTGT +
Preference number: 5 (lower is better)
Translates to: FYKYPYQMVALFPVLPRGFLSHG*SFQIMC
Trigger: ACACATTATTTGGAAAGACAAGCCATGGGAAAGAAA...TCCACGTGGCAGAACTGGAAACAATGCTACCATCTGATAAGGGTATTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420581.7
CDS CAA 90 bp CGAGGTGGCGGTGGCTGGAAGAATTCCTGCATTCTGGAATCTGGCTaGGGTCCTCCCAACAGCTCCCACATCCCAGGGGGCAGCCCCAAC +
Preference number: 6 (lower is better)
Translates to: RGGGGWKNSCILESG*GPPNSSHIPGGSPN
Trigger: GTTGGGGCTGCCCCCTGGGATGTGGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCCACCGCCACCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp GCCGAGGTGGCGGTGGCTGGAAGAATTCCTGCATTCTaGAATCTGGCTTGGGTCCTCCCAACAGCTCCCACA +
Preference number: 6 (lower is better)
Translates to: AEVAVAGRIPAF*NLAWVLPTAPT
Trigger: TGTGGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCCACCGCCACCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS GCA 72 bp TCTCGGGTGGTTCTCTGGCTTCCGGCATCCGAGATTTaGGCTGGATTCTCTTCAGCTTCACCACCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: SRVVLWLPASEI*AGFSSASPPGR
Trigger: CCTTCCGGGTGGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp TGGCGGTGGCTGGAAGAATTCCTGCATTCTGGAATCTaGCTTGGGTCCTCCCAACAGCTCCCACATCCCAGG +
Preference number: 6 (lower is better)
Translates to: WRWLEEFLHSGI*LGSSQQLPHPR
Trigger: CCTGGGATGTGGGAGCTGTTGGGAGGACCCAAGCCAGATTCCAGAATGCAGGAATTCTTCCAGCCACCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp AGGTTGGTTTTCTCGGGTGGTTCTCTGGCTTCCGGCATCCGAGATTaGCGCTGGATTCTCTTCAGCTTCACCACCCGGAAGGAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: RLVFSGGSLASGIRD*RWILFSFTTRKESG
Trigger: CCCTGACTCCTTCCGGGTGGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp GGTGGTTCTCTGGCTTCCGGCATCCGAGATTTGCGCTaGATTCTCTTCAGCTTCACCACCCGGAAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: GGSLASGIRDLR*ILFSFTTRKES
Trigger: TGACTCCTTCCGGGTGGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 72 bp TTCTCGGGTGGTTCTCTGGCTTCCGGCATCCGAGATTaGCGCTGGATTCTCTTCAGCTTCACCACCCGGAAG +
Preference number: 6 (lower is better)
Translates to: FSGGSLASGIRD*RWILFSFTTRK
Trigger: CTTCCGGGTGGTGAAGCTGAAGAGAATCCAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp GGTGGCCTGTTTCTCGGCACTGGCTTGAGCGTTTTGATGACATCTTaGAGGTTGGTTTTCTCGGGTGGTTCTCTGGCTTCCGGCATCCGA +
Preference number: 6 (lower is better)
Translates to: GGLFLGTGLSVLMTS*RLVFSGGSLASGIR
Trigger: TCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAACAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS GCA 72 bp AGGCTGGGGTCAGGGGCCATGACTTCCATTTCCGACTaGAGTTCTTTCAGTTCTTCAGCAGACAAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: RLGSGAMTSISD*SSFSSSADKLA
Trigger: GGCCAACTTGTCTGCTGAAGAACTGAAAGAACTGCAGTCGGAAATGGAAGTCATGGCCCCTGACCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp CAGCTGATCTCTGGGAGTGATTTCCACCAATGGGGGTaGCCTGTTTCTCGGCACTGGCTTGAGCGTTTTGAT +
Preference number: 6 (lower is better)
Translates to: QLISGSDFHQWG*PVSRHWLERFD
Trigger: ATCAAAACGCTCAAGCCAGTGCCGAGAAACAGGCCACCCCCATTGGTGGAAATCACTCCCAGAGATCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp TCCACCAATGGGGGTGGCCTGTTTCTCGGCACTGGCTTGAGCGTTTaGATGACATCTTTGAGGTTGGTTTTCTCGGGTGGTTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: STNGGGLFLGTGLSV*MTSLRLVFSGGSLA
Trigger: AGCCAGAGAACCACCCGAGAAAACCAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAACAGGCCACCCCCATTGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS TCA 72 bp TGTGACGAATGTCGTTTAGCAGCTGATCTCTGGGAGTaGTTTCCACCAATGGGGGTGGCCTGTTTCTCGGCA +
Preference number: 6 (lower is better)
Translates to: CDECRLAADLWE*FPPMGVACFSA
Trigger: TGCCGAGAAACAGGCCACCCCCATTGGTGGAAATCACTCCCAGAGATCAGCTGCTAAACGACATTCGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp GGAGTCAGGGTCTGTCCTGTACTTCGGGGCCTGCGATaGCTTTTTCATCATTTCACTGCGTTGACTAAAGGG +
Preference number: 6 (lower is better)
Translates to: GVRVCPVLRGLR*LFHHFTALTKG
Trigger: CCCTTTAGTCAACGCAGTGAAATGATGAAAAAGCCATCGCAGGCCCCGAAGTACAGGACAGACCCTGACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp CTGTTTCTCGGCACTGGCTTGAGCGTTTTGATGACATCTTTGAGGTaGGTTTTCTCGGGTGGTTCTCTGGCTTCCGGCATCCGAGATTTG +
Preference number: 6 (lower is better)
Translates to: LFLGTGLSVLMTSLR*VFSGGSLASGIRDL
Trigger: CAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp CGTTTTGATGACATCTTTGAGGTTGGTTTTCTCGGGTaGTTCTCTGGCTTCCGGCATCCGAGATTTGCGCTG +
Preference number: 6 (lower is better)
Translates to: RFDDIFEVGFLG*FSGFRHPRFAL
Trigger: CAGCGCAAATCTCGGATGCCGGAAGCCAGAGAACCACCCGAGAAAACCAACCTCAAAGATGTCATCAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 72 bp TTTCTCGGCACTGGCTTGAGCGTTTTGATGACATCTTaGAGGTTGGTTTTCTCGGGTGGTTCTCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: FLGTGLSVLMTS*RLVFSGGSLAS
Trigger: GGAAGCCAGAGAACCACCCGAGAAAACCAACCTCAAAGATGTCATCAAAACGCTCAAGCCAGTGCCGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp AACAAGAGATTTATGATTGAAGTTTCCTGTCGGTGGCTTGTCAGTTaGATCTTTCTGAATCATTCCCACGGGAAGGCTGGGGTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: NKRFMIEVSCRWLVS*IFLNHSHGKAGVRG
Trigger: GCCCCTGACCCCAGCCTTCCCGTGGGAATGATTCAGAAAGATCAAACTGACAAGCCACCGACAGGAAACTTCAATCATAAATCTCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 72 bp CTTTGTTCTTGGGCCTCTGGTCTGTCTCTCTGTTCTTaGAATGCTTTGTCAGTTACCTGCTGGCAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LCSWASGLSLCS*NALSVTCWQLF
Trigger: GAACAACTGCCAGCAGGTAACTGACAAAGCATTCAAAGAACAGAGAGACAGACCAGAGGCCCAAGAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CCA 72 bp CCATCTTCAGGAGAGTGTTGTTTGCCTTCAAAAGCCTaGCTATTTCCATTTCAGCATGGTGACCCAACATGT +
Preference number: 6 (lower is better)
Translates to: PSSGECCLPSKA*LFPFQHGDPTC
Trigger: ACATGTTGGGTCACCATGCTGAAATGGAAATAGCCAGGCTTTTGAAGGCAAACAACACTCTCCTGAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 72 bp TTTATGATTGAAGTTTCCTGTCGGTGGCTTGTCAGTTaGATCTTTCTGAATCATTCCCACGGGAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: FMIEVSCRWLVS*IFLNHSHGKAG
Trigger: CCCAGCCTTCCCGTGGGAATGATTCAGAAAGATCAAACTGACAAGCCACCGACAGGAAACTTCAATCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp ACCTGCTGGCAGTTGTTCTCACAATTTCTAATTTGTTCCTTTGCTTaGCCTTCCTCTTCTCTGTTCGTTTCTTCACTCTCTTCACCATCA +
Preference number: 6 (lower is better)
Translates to: TCWQLFSQFLICSFA*PSSSLFVSSLSSPS
Trigger: TGATGGTGAAGAGAGTGAAGAAACGAACAGAGAAGAGGAAGGCAAAGCAAAGGAACAAATTAGAAATTGTGAGAACAACTGCCAGCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS CAA 90 bp TTTTTCTCACTTTGTTCTTGGGCCTCTGGTCTGTCTCTCTGTTCTTaGAATGCTTTGTCAGTTACCTGCTGGCAGTTGTTCTCACAATTT +
Preference number: 6 (lower is better)
Translates to: FFSLCSWASGLSLCS*NALSVTCWQLFSQF
Trigger: AAATTGTGAGAACAACTGCCAGCAGGTAACTGACAAAGCATTCAAAGAACAGAGAGACAGACCAGAGGCCCAAGAACAAAGTGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5
CDS TCA 72 bp TTTAAATATTTCAGAAGGGAAATCCAACCAGCAACCTaGGTTGTTTCTGAAGTAAAGAATTCACTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: FKYFRREIQPAT*VVSEVKNSLEG
Trigger: ACCTTCAAGTGAATTCTTTACTTCAGAAACAACTCAGGTTGCTGGTTGGATTTCCCTTCTGAAATATTTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475434.1
CDS CCA 72 bp TCATCTTCTTCTTCTTCATCTTCTTCATCTGTTTCTTaGATATTGCTGCTGCCCTTTGATTCTCTTTTATTT +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSVS*ILLLPFDSLLF
Trigger: AAATAAAAGAGAATCAAAGGGCAGCAGCAATATCCAAGAAACAGATGAAGAAGATGAAGAAGAAGAAGATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420581.7
ENST00000475434.1
ENST00000489031.5