RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMOD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163431

Ensembl transcript IDs: ENST00000367288.5, ENST00000616739.1

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTGACTaGTGTGAGGACCTGGCCCTGAGCCCATGGTTAGGCAGAGTCATG +
Preference number: 1 (lower is better)
Translates to: IVTPLLCLPPSWACD*CEDLALSPWLGRVM
Trigger: CATGACTCTGCCTAACCATGGGCTCAGGGCCAGGTCCTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 90 bp ATAAGGCATCCTTCCTTGAGCGTGACCCAGGCCTGGACTCTCCCATaGCAGAATAGGGACATCCACAGCAGGTCAGCCAGGGATGGGGTG +
Preference number: 1 (lower is better)
Translates to: IRHPSLSVTQAWTLP*QNRDIHSRSARDGV
Trigger: CACCCCATCCCTGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCACGCTCAAGGAAGGATGCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 90 bp ACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTAGTAGAGGCCTaGCCTTCTAGACCTGGACAACCAGGTCAGTGGAGAGTCTTCTGC +
Preference number: 1 (lower is better)
Translates to: TPGSRTGSGADLVEA*PSRPGQPGQWRVFC
Trigger: GCAGAAGACTCTCCACTGACCTGGTTGTCCAGGTCTAGAAGGCCAGGCCTCTACTAGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTaGGCCTGTGACTGCTGTGAGGACCTGGCCCTGAGCCCATGGTTA +
Preference number: 1 (lower is better)
Translates to: AILQIVTPLLCLPPS*ACDCCEDLALSPWL
Trigger: TAACCATGGGCTCAGGGCCAGGTCCTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 90 bp GGGGAAGATGAGGCCCCTCTGAGCCCTAGGGCACACAGATATGGGTaGTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTC +
Preference number: 1 (lower is better)
Translates to: GEDEAPLSPRAHRYG*YSPNSHSTSLPAAF
Trigger: GAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGCACCCATATCTGTGTGCCCTAGGGCTCAGAGGGGCCTCATCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 90 bp TGTGTCTGTCTCCTCTCCTCTGGGCCCAGTGATTGCTTAGGTGACTaGGGTGACAGGCAAGTGGGTGGAGGGAATGGAGAAGAGTGTACC +
Preference number: 1 (lower is better)
Translates to: CVCLLSSGPSDCLGD*GDRQVGGGNGEECT
Trigger: GGTACACTCTTCTCCATTCCCTCCACCCACTTGCCTGTCACCCCAGTCACCTAAGCAATCACTGGGCCCAGAGGAGAGGAGACAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 90 bp TGTGAGGACCTGGCCCTGAGCCCATGGTTAGGCAGAGTCATGGAATaGGCATCCCTGAACATGCCTAATATAGCCATCCCAGCACCCTGG +
Preference number: 1 (lower is better)
Translates to: CEDLALSPWLGRVME*ASLNMPNIAIPAPW
Trigger: CCAGGGTGCTGGGATGGCTATATTAGGCATGTTCAGGGATGCTCATTCCATGACTCTGCCTAACCATGGGCTCAGGGCCAGGTCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 90 bp TGGATGTGGTCCCTGTGGGACATCTTTCCTGGATCACAGGCCTTTTaGAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCATCTTCTCA +
Preference number: 1 (lower is better)
Translates to: WMWSLWDIFPGSQAF*SLPATWALDSAIFS
Trigger: TGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCACAGGGACCACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 90 bp AAGAGTGTACCCTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTaGCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCT +
Preference number: 1 (lower is better)
Translates to: KSVPWDLRALPPGLD*PLVLVRPSTAILLP
Trigger: AGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAGGGTACACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 90 bp GCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCATCTTCTCAGTaGTGTGCTAAAAGGACTCTTCTTGTCCAGAAACCTGAGCTCCAT +
Preference number: 1 (lower is better)
Translates to: AACQLHGPWTVPSSQ*CAKRTLLVQKPELH
Trigger: ATGGAGCTCAGGTTTCTGGACAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 90 bp ATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTaGCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTCCAGA +
Preference number: 1 (lower is better)
Translates to: ITGLLQLASYMGPGQ*HLLSDVLKGLFLSR
Trigger: TCTGGACAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 90 bp TACACAGCTATTCATACAGCAGCAGGTGGGTGTGAGGAAAATGTCTaGTTTGGCATCAAACCTTCAAGTCCAGCTGCTGTCTGTCCCACT +
Preference number: 1 (lower is better)
Translates to: YTAIHTAAGGCEENV*FGIKPSSPAAVCPT
Trigger: AGTGGGACAGACAGCAGCTGGACTTGAAGGTTTGATGCCAAAGCAGACATTTTCCTCACACCCACCTGCTGCTGTATGAATAGCTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 90 bp ATGGAAAAACAGATACACAGCTATTCATACAGCAGCAGGTGGGTGTaGGGAAAATGTCTGCTTTGGCATCAAACCTTCAAGTCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: MEKQIHSYSYSSRWV*GKCLLWHQTFKSSC
Trigger: GCAGCTGGACTTGAAGGTTTGATGCCAAAGCAGACATTTTCCTCACACCCACCTGCTGCTGTATGAATAGCTGTGTATCTGTTTTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 90 bp TGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTaGATTTATTTCTTGGCCAACTCAAATAGTGTGGCAGGGAACCTG +
Preference number: 1 (lower is better)
Translates to: CLEFRFSSMLHFLRM*IYFLANSNSVAGNL
Trigger: CAGGTTCCCTGCCACACTATTTGAGTTGGCCAAGAAATAAATTCACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 90 bp GTGATCATGGATATATTAGTTAACCTCTCTGGGCCAAATTCTATCTaGAAAATAGAATATTGGTATCCACCTCACAGAGTTGAAGGATCA +
Preference number: 1 (lower is better)
Translates to: VIMDILVNLSGPNSI*KIEYWYPPHRVEGS
Trigger: TGATCCTTCAACTCTGTGAGGTGGATACCAATATTCTATTTTGCAGATAGAATTTGGCCCAGAGAGGTTAACTAATATATCCATGATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCTGTAGCCCTGGGAGGTaGGGCCTGAGCAGTCATGGC +
Preference number: 2 (lower is better)
Translates to: PGSQAFCSLPATWALDSACSPGR*GLSSHG
Trigger: GCCATGACTGCTCAGGCCTCACCTCCCAGGGCTACA...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCCCTGGGCTCCACTCTaGCCCAGCACCCCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACPWAPL*PSTPEN
Trigger: GTTCTCAGGGGTGCTGGGGCAGAGTGGAGCCCAGGG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTGCCTGCCGCCTTCCTaGGCCTGTGACTGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTCLPPS*ACDCCE
Trigger: CTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATTGTGCCTCCTGCTGTTaGGGCAACCTGGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDCASCC*GNLEAE
Trigger: CTCTGCCTCCAGGTTGCCTCAACAGCAGGAGGCACA...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGTGTGCCTCCTGCTGTTaGGGCAACCTGGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQCASCC*GNLEAE
Trigger: CTCTGCCTCCAGGTTGCCTCAACAGCAGGAGGCACA...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTGCCTGCCGCCTTCCTaGGCCTGTGACTGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAICLPPS*ACDCCE
Trigger: CTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CAA 90 bp TGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTaGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACC +
Preference number: 2 (lower is better)
Translates to: WDLRALPPGLDCPLV*VRPSTAILLPSWGT
Trigger: GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTGTAGCCCTGGGAGGTaGGGCCTGAGCAGTCATGGC +
Preference number: 2 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSCSPGR*GLSSHG
Trigger: GCCATGACTGCTCAGGCCTCACCTCCCAGGGCTACA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCCCTTTGGGCCCCCATaGCTCTCCATCTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQPFGPP*LSIFLP
Trigger: TGGCAGAAAGATGGAGAGGCATGGGGGCCCAAAGGG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTCCCATCAGGCACTGTaGATCCAGGCCACTGCCCCT +
Preference number: 2 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWSHQAL*IQATAP
Trigger: AGGGGCAGTGGCCTGGATGCACAGTGCCTGATGGGA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCTAGCACAGCGATCTTaGTTCCTAGCTGGGGCACCC +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQLAQRS*FLAGAP
Trigger: GGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGAGCAGTCATGGCATTaGCAGATGGTGCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSEQSWH*QMVPGS
Trigger: GCTGCCAGGCACCATCTGCCAATGCCATGACTGCTC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CAA 90 bp GTGGATGTGGTCCCTGTGGGACATCTTTCCTGGATCACAGGCCTTTaGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCATCTTCTC +
Preference number: 2 (lower is better)
Translates to: VDVVPVGHLSWITGL*QLASYMGPGQCHLL
Trigger: GAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCACAGGGACCACATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACCTTCAAGTCCAGCTaGTGTCTGTCCCACTCCTCC +
Preference number: 2 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSTFKSS*CLSHSS
Trigger: GGAGGAGTGGGACAGACAGCAGCTGGACTTGAAGGT...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCACCTTCAAGTCCAGCTaGTGTCTGTCCCACTCCTCC +
Preference number: 2 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTTFKSS*CLSHSS
Trigger: GGAGGAGTGGGACAGACAGCAGCTGGACTTGAAGGT...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGAGCAGTCATGGCATTaGCAGATGGTGCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWEQSWH*QMVPGS
Trigger: GCTGCCAGGCACCATCTGCCAATGCCATGACTGCTC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGAGCGTGACCCAGGCCTaGACTCTCCCATGGCAGAAT +
Preference number: 2 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWSVTQA*TLPWQN
Trigger: ATTCTGCCATGGGAGAGTCCAGGCCTGGGTCACGCT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCAGCTACATGGGCCCTaGACAGTGCCATCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDQLHGP*TVPSSQ
Trigger: CTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTAGCTTGCCAGCTACATaGGCCCTGGACAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACSLPAT*ALDSAI
Trigger: GATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCT...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGAGCTTGCCAGCTACATaGGCCCTGGACAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWSLPAT*ALDSAI
Trigger: GATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGTTCAGGACAACAGGTaGGGCACAGCCATTCACAGC +
Preference number: 2 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSVQDNR*GTAIHS
Trigger: GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAAC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGTTCAGGACAACAGGTaGGGCACAGCCATTCACAGC +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQVQDNR*GTAIHS
Trigger: GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAAC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CAA 90 bp TGGTCCCTGTGGGACATCTTTCCTGGATCACAGGCCTTTTGCAGCTaGCCAGCTACATGGGCCCTGGACAGTGCCATCTTCTCAGTGATG +
Preference number: 2 (lower is better)
Translates to: WSLWDIFPGSQAFCS*PATWALDSAIFSVM
Trigger: CATCACTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCACAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCGGATCACAGGCCTTTTaGAGCTTGCCAGCTACATGG +
Preference number: 2 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTGSQAF*SLPATW
Trigger: CCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCC...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCAGGCCTGAGCAGTCATaGCATTGGCAGATGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIRPEQS*HWQMVP
Trigger: AGGCACCATCTGCCAATGCCATGACTGCTCAGGCCT...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGACCTAGTAGAGGCCTaGCCTTCTAGACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDDLVEA*PSRPGQ
Trigger: TTGTCCAGGTCTAGAAGGCCAGGCCTCTACTAGGTC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCACAGTGCCAAGGGGTaGCAGCACCTTCAAGAGAAT +
Preference number: 2 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTHSAKG*QHLQEN
Trigger: ATTCTCTTGAAGGTGCTGCCACCCCTTGGCACTGTG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGCTGGGAGGTGAGGCCTaGGCAGTCATGGCATTGGCA +
Preference number: 2 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLLGGEA*AVMALA
Trigger: TGCCAATGCCATGACTGCTCAGGCCTCACCTCCCAG...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTGGCAGAGTCATGGAATaGGCATCCCTGAACATGCCT +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACGRVME*ASLNMP
Trigger: AGGCATGTTCAGGGATGCTCATTCCATGACTCTGCC...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCAGAGAAACCTACAAGTaGCACAGACCCAAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTRETYK*HRPKVA
Trigger: TGCCACCTTGGGTCTGTGTCACTTGTAGGTTTCTCT...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTATGGGCCCTGGACAGTaGCATCTTCTCAGTGATGTG +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACMGPGQ*HLLSDV
Trigger: CACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTGGATCACAGGCCTTTTaGAGCTTGCCAGCTACATGG +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACGSQAF*SLPATW
Trigger: CCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCC...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCAGGCCTGAGCAGTCATaGCATTGGCAGATGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSRPEQS*HWQMVP
Trigger: AGGCACCATCTGCCAATGCCATGACTGCTCAGGCCT...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCGCCTGGACTCTCCCATaGCAGAATAGGGACATCCAC +
Preference number: 2 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSAWTLP*QNRDIH
Trigger: GTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGC...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCGTGGGACATCTTTCCTaGATCACAGGCCTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTVGHLS*ITGLLQ
Trigger: CTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCAC...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTGACCTAGTAGAGGCCTaGCCTTCTAGACCTGGACAA +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACDLVEA*PSRPGQ
Trigger: TTGTCCAGGTCTAGAAGGCCAGGCCTCTACTAGGTC...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCCACAGTGCCAAGGGGTaGCAGCACCTTCAAGAGAAT +
Preference number: 2 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIHSAKG*QHLQEN
Trigger: ATTCTCTTGAAGGTGCTGCCACCCCTTGGCACTGTG...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGCTGTTGAGGCAACCTaGAGGCAGAGAAACCTACAA +
Preference number: 2 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDAVEAT*RQRNLQ
Trigger: TTGTAGGTTTCTCTGCCTCCAGGTTGCCTCAACAGC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGTGGGACATCTTTCCTaGATCACAGGCCTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIVGHLS*ITGLLQ
Trigger: CTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCAC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTGGATGTGGTCCCTGTaGGACATCTTTCCTGGATCA +
Preference number: 2 (lower is better)
Translates to: AILQIVTPLLCLPPSWACWMWSL*DIFPGS
Trigger: TGATCCAGGAAAGATGTCCCACAGGGACCACATCCA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGTCTTGTCCAGAAACCTaGGCTCCATGTACTAAAGCA +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQSCPET*APCTKA
Trigger: TGCTTTAGTACATGGAGCTCAGGTTTCTGGACAAGA...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CAA 90 bp CAGCTATTCATACAGCAGCAGGTGGGTGTGAGGAAAATGTCTGCTTaGGCATCAAACCTTCAAGTCCAGCTGCTGTCTGTCCCACTCCTC +
Preference number: 2 (lower is better)
Translates to: QLFIQQQVGVRKMSA*ASNLQVQLLSVPLL
Trigger: GAGGAGTGGGACAGACAGCAGCTGGACTTGAAGGTTTGATGCCAAAGCAGACATTTTCCTCACACCCACCTGCTGCTGTATGAATAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGCTGGGAGGTGAGGCCTaGGCAGTCATGGCATTGGCA +
Preference number: 2 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVLGGEA*AVMALA
Trigger: TGCCAATGCCATGACTGCTCAGGCCTCACCTCCCAG...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTGTGCCATCTTCTCAGTaGTGTGCTAAAAGGACTCTT +
Preference number: 2 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPVPSSQ*CAKRTL
Trigger: AAGAGTCCTTTTAGCACATCACTGAGAAGATGGCAC...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCAGTGGAGAGTCTTCTaGTTAGAGTTCAGATTTTCC +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQQWRVF*LEFRFS
Trigger: GGAAAATCTGAACTCTAAGCAGAAGACTCTCCACTG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCCAGTGGAGAGTCTTCTaGTTAGAGTTCAGATTTTCC +
Preference number: 2 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSQWRVF*LEFRFS
Trigger: GGAAAATCTGAACTCTAAGCAGAAGACTCTCCACTG...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGCACACAGATATGGGTaGTATTCTCCAAATAGTCAC +
Preference number: 2 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDAHRYG*YSPNSH
Trigger: GTGACTATTTGGAGAATAGCACCCATATCTGTGTGC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGCACACAGATATGGGTaGTATTCTCCAAATAGTCAC +
Preference number: 2 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQAHRYG*YSPNSH
Trigger: GTGACTATTTGGAGAATAGCACCCATATCTGTGTGC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGCCCACTCCTCCTGTCTaGAGCCTACTCCCATCAGGC +
Preference number: 2 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVPTPPV*SLLPSG
Trigger: GCCTGATGGGAGTAGGCTCCAGACAGGAGGAGTGGG...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGGAAAATGTCTGCTTTaGCATCAAACCTTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSGKCLL*HQTFKS
Trigger: GGACTTGAAGGTTTGATGCCAAAGCAGACATTTTCC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGTGTGGCAGGGAACCTaGGCTTCTAGAGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVVWQGT*ASRVLQ
Trigger: CTGGAGGACTCTAGAAGCTCAGGTTCCCTGCCACAC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGAGGCCTTTTGCAGCTTaGCAGCTACATGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVRPFAA*QLHGPW
Trigger: CCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCT...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGCCCTTTGGGCCCCCATaGCTCTCCATCTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVPFGPP*LSIFLP
Trigger: TGGCAGAAAGATGGAGAGGCATGGGGGCCCAAAGGG...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR GCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGATGGGCCCTGGACAGTaGCATCTTCTCAGTGATGTG +
Preference number: 2 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVMGPGQ*HLLSDV
Trigger: CACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTTGTGAATTTATTTCTTaGCCAACTCAAATAGTGTGG +
Preference number: 2 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPCEFIS*PTQIVW
Trigger: CCACACTATTTGAGTTGGCCAAGAAATAAATTCACA...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 72 bp CTCTGCCCCAGCACCCCTGAGAACAACTCTGGCTACTaGCTCCAGGCAGCAGGACTGGTTCAGGAGCAGACC +
Preference number: 3 (lower is better)
Translates to: LCPSTPENNSGY*LQAAGLVQEQT
Trigger: GGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCTCAGGGGTGCTGGGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp CAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTaGGCCTGTGACTGCTGTGAGGACCTGGCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: QIVTPLLCLPPS*ACDCCEDLALS
Trigger: GCTCAGGGCCAGGTCCTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCAGGCCTTTTGCAGCTaGCCAGCTACATGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQQAFCS*PATWAL
Trigger: CAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCAGGCCTTTTGCAGCTaGCCAGCTACATGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: AILQIVTPLLCLPPSWACQAFCS*PATWAL
Trigger: CAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 72 bp CCCTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTaGCCTCTGGTTTTGGTCAGACCTAGCACAGCGATC +
Preference number: 3 (lower is better)
Translates to: PWDLRALPPGLD*PLVLVRPSTAI
Trigger: GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGTGGGCATGGCAGCATaGTCAGCATTCCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQVGMAA*SAFLQL
Trigger: CAACTGCAGGAATGCTGACAATGCTGCCATGCCCAC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp GAGATAAGGCATCCTTCCTTGAGCGTGACCCAGGCCTaGACTCTCCCATGGCAGAATAGGGACATCCACAGC +
Preference number: 3 (lower is better)
Translates to: EIRHPSLSVTQA*TLPWQNRDIHS
Trigger: GCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCACGCTCAAGGAAGGATGCCTTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATaGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGC +
Preference number: 3 (lower is better)
Translates to: PGSQAFCSLPAT*ALDSAIFSVMC
Trigger: GCACATCACTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp GCTGGGGTGGATGTGGTCCCTGTGGGACATCTTTCCTaGATCACAGGCCTTTTGCAGCTTGCCAGCTACATG +
Preference number: 3 (lower is better)
Translates to: AGVDVVPVGHLS*ITGLLQLASYM
Trigger: CATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCACAGGGACCACATCCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp AGCAGGACTGGTTCAGGAGCAGACCTAGTAGAGGCCTaGCCTTCTAGACCTGGACAACCAGGTCAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: SRTGSGADLVEA*PSRPGQPGQWR
Trigger: TCTCCACTGACCTGGTTGTCCAGGTCTAGAAGGCCAGGCCTCTACTAGGTCTGCTCCTGAACCAGTCCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTaGTTCAGGAGCAGACCTAGTAGAGGCCTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: RTTLATDSRQQD*FRSRPSRGLAF
Trigger: GAAGGCCAGGCCTCTACTAGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp AGAAAGATGCCTTTCACCTACACCCGATGGTGGGCATaGCAGCATTGTCAGCATTCCTGCAGTTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: RKMPFTYTRWWA*QHCQHSCSWGR
Trigger: CCTGCCCCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAAAGGCATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTGGATCACAGGCCTTTaGCAGCTTGCCAGCTACATG +
Preference number: 3 (lower is better)
Translates to: AILQIVTPLLCLPPSWACWITGL*QLASYM
Trigger: CATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCTAAAAGGACTCTTCTaGTCCAGAAACCTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQLKGLF*SRNLSS
Trigger: GGAGCTCAGGTTTCTGGACAAGAAGAGTCCTTTTAG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCTAAAAGGACTCTTCTaGTCCAGAAACCTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDLKGLF*SRNLSS
Trigger: GGAGCTCAGGTTTCTGGACAAGAAGAGTCCTTTTAG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGACTGGCCCAGCAGCTTaGCCCCGTGGGCTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVTGPAA*PRGLLR
Trigger: TCTGAGGAGCCCACGGGGCAAAGCTGCTGGGCCAGT...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 72 bp CTGGCCCTGAGCCCATGGTTAGGCAGAGTCATGGAATaGGCATCCCTGAACATGCCTAATATAGCCATCCCA +
Preference number: 3 (lower is better)
Translates to: LALSPWLGRVME*ASLNMPNIAIP
Trigger: TGGGATGGCTATATTAGGCATGTTCAGGGATGCTCATTCCATGACTCTGCCTAACCATGGGCTCAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 72 bp CTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTaGCATCTTCTCAGTGATGTGCTAAAAGGACTCTTC +
Preference number: 3 (lower is better)
Translates to: LLQLASYMGPGQ*HLLSDVLKGLF
Trigger: GAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 72 bp AAATGTCTGCTTTGGCATCAAACCTTCAAGTCCAGCTaGTGTCTGTCCCACTCCTCCTGTCTGGAGCCTACT +
Preference number: 3 (lower is better)
Translates to: KCLLWHQTFKSS*CLSHSSCLEPT
Trigger: AGTAGGCTCCAGACAGGAGGAGTGGGACAGACAGCAGCTGGACTTGAAGGTTTGATGCCAAAGCAGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR-3UTR CAA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTAGGAAAATGTCTGCTTaGGCATCAAACCTTCAAGTC +
Preference number: 3 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPRKMSA*ASNLQV
Trigger: GACTTGAAGGTTTGATGCCAAAGCAGACATTTTCCT...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 72 bp CAGCTACATGGGCCCTGGACAGTGCCATCTTCTCAGTaGTGTGCTAAAAGGACTCTTCTTGTCCAGAAACCT +
Preference number: 3 (lower is better)
Translates to: QLHGPWTVPSSQ*CAKRTLLVQKP
Trigger: AGGTTTCTGGACAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CCA 72 bp ATGAAATTCAGAAAGATGCCTTTCACCTACACCCGATaGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: MKFRKMPFTYTR*WAWQHCQHSCS
Trigger: ACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAAAGGCATCTTTCTGAATTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 72 bp CAGATACACAGCTATTCATACAGCAGCAGGTGGGTGTaGGGAAAATGTCTGCTTTGGCATCAAACCTTCAAG +
Preference number: 3 (lower is better)
Translates to: QIHSYSYSSRWV*GKCLLWHQTFK
Trigger: CTTGAAGGTTTGATGCCAAAGCAGACATTTTCCTCACACCCACCTGCTGCTGTATGAATAGCTGTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR TCA 72 bp TTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTaGATTTATTTCTTGGCCAACTCAAATAGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: FRFSSMLHFLRM*IYFLANSNSVA
Trigger: TGCCACACTATTTGAGTTGGCCAAGAAATAAATTCACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR GCA 72 bp GATATATTAGTTAACCTCTCTGGGCCAAATTCTATCTaGAAAATAGAATATTGGTATCCACCTCACAGAGTT +
Preference number: 3 (lower is better)
Translates to: DILVNLSGPNSI*KIEYWYPPHRV
Trigger: AACTCTGTGAGGTGGATACCAATATTCTATTTTGCAGATAGAATTTGGCCCAGAGAGGTTAACTAATATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCCCTCCTCCTCCACCTTaGCCGGTCCTTCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAPPPPP*PVLQRA
Trigger: AGCCCTCTGAAGGACCGGCCAAGGTGGAGGAGGAGG...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGGAGGGCCCGGAAGATaGCCAGGATGCCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAGGPGR*PGCLCL
Trigger: CAGGCAAAGGCATCCTGGCCATCTTCCGGGCCCTCC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCATGCCTGCCGCCTTCCTaGGCCTGTGACTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPCLPPS*ACDCCE
Trigger: CTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCA...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATACGCAGCAGCCTCCCTaGAGCCCAGGGCTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDTQQPP*SPGLVD
Trigger: GTCCACTAGCCCTGGGCTTCAGGGAGGCTGCTGCGT...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCTCCTTCCCCAGATCTaGGTCCCGTCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDLLPQI*VPSGAQ
Trigger: CTGGGCCCCAGACGGGACTCAGATCTGGGGAAGGAG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCACTGCTGGTCGAGGACTaGAGCTCCTTGGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPLLVED*SSLALL
Trigger: CAGAAGGGCCAAGGAGCTGCAGTCCTCGACCAGCAG...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGTCCTTCAGAGGGCTTaGTGGGGCCACTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSVLQRA*WGHWAS
Trigger: AGACGCCCAGTGGCCCCACCAAGCCCTCTGAAGGAC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCCACGGCCCCGGCCTTaGGTACCTCCAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDPRPRP*VPPADP
Trigger: AGGATCTGCTGGAGGTACCCAAGGCCGGGGCCGTGG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCACCCACTCCTCCTGTCTaGAGCCTACTCCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPPTPPV*SLLPSG
Trigger: GCCTGATGGGAGTAGGCTCCAGACAGGAGGAGTGGG...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTACGCAGCAGCCTCCCTaGAGCCCAGGGCTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACTQQPP*SPGLVD
Trigger: GTCCACTAGCCCTGGGCTTCAGGGAGGCTGCTGCGT...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGGGAGAGGGGTGAGCTaGTCTGGATGCAGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDGRGVS*SGCSEW
Trigger: CCACTCGCTGCATCCAGATCAGCTCACCCCTCTCCC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGCAGCCTGGTCCTACTaGAGCAGTTTGGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAAAWSY*SSLGTS
Trigger: GGAAGTGCCCAAACTGCTTCAGTAGGACCAGGCTGC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCATCCGTCTGGTTTCTCTaGCGCAGCCCCACGGGAACA +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSSVWFL*RSPTGT
Trigger: TGTTCCCGTGGGGCTGCGGCAGAGAAACCAGACGGA...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGCCCTGGGCTCCACTCTaGCCCAGCACCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWPWAPL*PSTPEN
Trigger: GTTCTCAGGGGTGCTGGGGCAGAGTGGAGCCCAGGG...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTCCTGGGCCTGTGACTaGTGTGAGGACCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTSWACD*CEDLAL
Trigger: CAGGGCCAGGTCCTCACAGCAGTCACAGGCCCAGGA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGAGCAAACCTCCTGCTaGTCGAGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAEQTSC*SRTAAP
Trigger: AGGAGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCGGGAACACTCCCGTCTaGGTCCACCACGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTGNTPV*VHHVQL
Trigger: GAGCTGGACGTGGTGGACCCAGACGGGAGTGTTCCC...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGGGAACACTCCCGTCTaGGTCCACCACGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQGNTPV*VHHVQL
Trigger: GAGCTGGACGTGGTGGACCCAGACGGGAGTGTTCCC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAAGCGTGACCCAGGCCTaGACTCTCCCATGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPSVTQA*TLPWQN
Trigger: ATTCTGCCATGGGAGAGTCCAGGCCTGGGTCACGCT...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAAGCTTGCCAGCTACATaGGCCCTGGACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPSLPAT*ALDSAI
Trigger: GATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCT...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCTGTCAATGCCCCGGATaGTCTTCTCCTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSACQCPG*SSPPWA
Trigger: AGCCCAAGGAGGAGAAGATCATCCGGGGCATTGACA...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCAGCCTGGTCCTACTaGAGCAGTTTGGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSAAWSY*SSLGTS
Trigger: GGAAGTGCCCAAACTGCTTCAGTAGGACCAGGCTGC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCTGGGAGGTGAGGCCTaGGCAGTCATGGCATTGGCA +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTLGGEA*AVMALA
Trigger: TGCCAATGCCATGACTGCTCAGGCCTCACCTCCCAG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCTGCCCCAGCACCCCTaGGAACAACTCTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTLPQHP*EQLWLL
Trigger: CAGTAGCCAGAGTTGTTCTCAGGGGTGCTGGGGCAG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCTGTGCCTCCTGCTGTTaGGGCAACCTGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSCASCC*GNLEAE
Trigger: CTCTGCCTCCAGGTTGCCTCAACAGCAGGAGGCACA...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGTGTACCCTGGGATCTaGGGGCTTTACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQVYPGI*GLYPQD
Trigger: GTCCTGGGGGTAAAGCCCTCAGATCCCAGGGTACAC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCTTCTTGGTGGCCACTaGCCTCTCCTCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQLLGGH*PLLSSP
Trigger: GGGAGAGGAGAGGAGAGGGCAGTGGCCACCAAGAAG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCTGCCTTTGCTCCTaGAGCCGCTTTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSACLCS*SRFCLC
Trigger: GCAGAGACAAAAGCGGCTGCAGGAGCAAAGGCAGGC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGGCATTGGCAGATGGTaGCTGGCAGCCTGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSGIGRW*LAAWSY
Trigger: GTAGGACCAGGCTGCCAGGCACCATCTGCCAATGCC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGGCATTGGCAGATGGTaGCTGGCAGCCTGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDGIGRW*LAAWSY
Trigger: GTAGGACCAGGCTGCCAGGCACCATCTGCCAATGCC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCGTGGCAGTTCCACAGTaGCAAGGGGTGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTVAVPQ*QGVAAP
Trigger: AGGTGCTGCCACCCCTTGGCACTGTGGAACTGCCAC...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCTATCAGAGTCCTGGTaGGCAGGGAAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQLSESW*AGKGEG
Trigger: CCCCTCTCCCTTCCCTGCCCACCAGGACTCTGATAG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCATCTCCTCTTCCTTCTTaGTGGCCACTGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPSPLPS*WPLPSP
Trigger: AGGAGAGGGCAGTGGCCACCAAGAAGGAAGAGGAGA...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGCTTGGTGGGGCCACTaGGCGTCTGTTTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIAWWGH*ASVSRV
Trigger: CACCCGAGAAACAGACGCCCAGTGGCCCCACCAAGC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCCTTCAGAGGGCTTGGTaGGGCCACTGGGCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSLQRAW*GHWASV
Trigger: AACAGACGCCCAGTGGCCCCACCAAGCCCTCTGAAG...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCCTCCATGATAAGGGGTaGAGCCAAGGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSLHDKG*SQGRGR
Trigger: CCTCCCCCTCCCTTGGCTCCACCCCTTATCATGGAG...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCTTGGCAGATGGTGCCTaGCAGCCTGGTCCTACTGAA +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSALADGA*QPGPTE
Trigger: TTCAGTAGGACCAGGCTGCCAGGCACCATCTGCCAA...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCATGGCATTGGCAGATaGTGCCTGGCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTHGIGR*CLAAWS
Trigger: GGACCAGGCTGCCAGGCACCATCTGCCAATGCCATG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGCCTGGACTCTCCCATaGCAGAATAGGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAAWTLP*QNRDIH
Trigger: GTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCCAGCTACATGGGCCCTaGACAGTGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAQLHGP*TVPSSQ
Trigger: CTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTG...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAAGCTTGCCAGCTACATaGGCCCTGGACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSSLPAT*ALDSAI
Trigger: GATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCT...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCACCCGATGGTGGGCATaGCAGCATTGTCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSATRWWA*QHCQHS
Trigger: GGAATGCTGACAATGCTGCCATGCCCACCATCGGGT...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAACCCGATGGTGGGCATaGCAGCATTGTCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPTRWWA*QHCQHS
Trigger: GGAATGCTGACAATGCTGCCATGCCCACCATCGGGT...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCACTAGTGGACCCCGGCTaGTCTAATCAGCGGCCAATA +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPLVDPG*SNQRPI
Trigger: TATTGGCCGCTGATTAGACCAGCCGGGGTCCACTAG...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616739.1
CDS-3UTR TCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCATGCAGCGAGTGGGCTaGGGAGCAAACCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIMQRVG*GANLLL
Trigger: CAGCAGGAGGTTTGCTCCTCAGCCCACTCGCTGCAT...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCGGGAGAGGGGTGAGCTaGTCTGGATGCAGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSGRGVS*SGCSEW
Trigger: CCACTCGCTGCATCCAGATCAGCTCACCCCTCTCCC...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCTGCCCCAGCACCCCTaGGAACAACTCTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACLPQHP*EQLWLL
Trigger: CAGTAGCCAGAGTTGTTCTCAGGGGTGCTGGGGCAG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAGGCAGAGTCATGGAATaGGCATCCCTGAACATGCCT +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPGRVME*ASLNMP
Trigger: AGGCATGTTCAGGGATGCTCATTCCATGACTCTGCC...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTGTGCCTCCTGCTGTTaGGGCAACCTGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWCASCC*GNLEAE
Trigger: CTCTGCCTCCAGGTTGCCTCAACAGCAGGAGGCACA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGAGGAGCAAACCTCCTaGTGGTCGAGGACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSEEQTS*WSRTAA
Trigger: AGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTCCTC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAGCTTCTCGCCACTCTTaGCACCAGCTTCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPASRHS*HQLHLC
Trigger: ACAGAGATGAAGCTGGTGGCAAGAGTGGCGAGAAGC...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCTCTCCCATCCTTCCCTaGCTCCTTCTTATCCACTGC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSASPILP*LLLIHC
Trigger: GCAGTGGATAAGAAGGAGGCAGGGAAGGATGGGAGA...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGGCTTCCTGTGCCTaGCTTTGCTCCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAILASCA*LCSCSR
Trigger: GCGGCTGCAGGAGCAAAGGCAGGCACAGGAAGCCAA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAATGGGCCCTGGACAGTaGCATCTTCTCAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPMGPGQ*HLLSDV
Trigger: CACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCAGGCCTTTTGCAGCTTaGCAGCTACATGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTRPFAA*QLHGPW
Trigger: CCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCT...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCCCCTTTGGGCCCCCATaGCTCTCCATCTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSPFGPP*LSIFLP
Trigger: TGGCAGAAAGATGGAGAGGCATGGGGGCCCAAAGGG...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTTCCCATCAGGCACTGTaGATCCAGGCCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPSHQAL*IQATAP
Trigger: AGGGGCAGTGGCCTGGATGCACAGTGCCTGATGGGA...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAACCTTCAAGTCCAGCTaGTGTCTGTCCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSTFKSS*CLSHSS
Trigger: GGAGGAGTGGGACAGACAGCAGCTGGACTTGAAGGT...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTGTGGCAGTTCCACAGTaGCAAGGGGTGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPVAVPQ*QGVAAP
Trigger: AGGTGCTGCCACCCCTTGGCACTGTGGAACTGCCAC...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCACCCCCAGGACTAGACTaGCCTCTGGTTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSPPGLD*PLVLVR
Trigger: TCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGG...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAAGGACTGCAGCTCCTTaGCCCTTCTGTGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSRTAAP*PFCATG
Trigger: ACCTGTAGCACAGAAGGGCCAAGGAGCTGCAGTCCT...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGCTATCAGAGTCCTGGTaGGCAGGGAAGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWLSESW*AGKGEG
Trigger: CCCCTCTCCCTTCCCTGCCCACCAGGACTCTGATAG...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGACATCTTGGCAAAATaGGCTGTGGCTGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQDILAK*AVAARG
Trigger: GCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGACTGTTTCTCCGTCTaGTTTCTCTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSDCFSV*FLCRSP
Trigger: GGGGCTGCGGCAGAGAAACCAGACGGAGAAACAGTC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGGTTGTACACACCCGTaGACTGTTTCTCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAGCTHP*TVSPSG
Trigger: ACCAGACGGAGAAACAGTCCACGGGTGTGTACAACC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCATGGCAAAGGCCACGTaGTCATCGGCTCGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTMAKAT*SSARVL
Trigger: CAACACGCGAGCCGATGACCACGTGGCCTTTGCCAT...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCCACAGATGTGTCGCTaGTTGTGGAAGCGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDPQMCR*LWKRSS
Trigger: CGAGCTCCGCTTCCACAACCAGCGACACATCTGTGG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTCTCCATGATAAGGGGTaGAGCCAAGGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPLHDKG*SQGRGR
Trigger: CCTCCCCCTCCCTTGGCTCCACCCCTTATCATGGAG...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCCATGGCATTGGCAGATaGTGCCTGGCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIHGIGR*CLAAWS
Trigger: GGACCAGGCTGCCAGGCACCATCTGCCAATGCCATG...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGAGCAGTCATGGCATTaGCAGATGGTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQEQSWH*QMVPGS
Trigger: GCTGCCAGGCACCATCTGCCAATGCCATGACTGCTC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGAGCAGTCATGGCATTaGCAGATGGTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDEQSWH*QMVPGS
Trigger: GCTGCCAGGCACCATCTGCCAATGCCATGACTGCTC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCAGCGTGACCCAGGCCTaGACTCTCCCATGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSSVTQA*TLPWQN
Trigger: ATTCTGCCATGGGAGAGTCCAGGCCTGGGTCACGCT...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGTTCAGGACAACAGGTaGGGCACAGCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSVQDNR*GTAIHS
Trigger: GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAAC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGAGAAGAGTGTACCCTaGGATCTGAGGGCTTTACCC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAEKSVP*DLRALP
Trigger: GGGTAAAGCCCTCAGATCCCAGGGTACACTCTTCTC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGGGGTGACAGGCAAGTaGGTGGAGGGAATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSGVTGK*VEGMEK
Trigger: CTTCTCCATTCCCTCCACCCACTTGCCTGTCACCCC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAGATTGCTTAGGTGACTaGGGTGACAGGCAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPDCLGD*GDRQVG
Trigger: ACCCACTTGCCTGTCACCCCAGTCACCTAAGCAATC...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCTGTGCTACAGGTGCTaGAGTGTTCACTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDLCYRC*SVHWTQ
Trigger: CTGCGTCCAGTGAACACTTCAGCACCTGTAGCACAG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCTGTCAATGCCCCGGATaGTCTTCTCCTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSCQCPG*SSPPWA
Trigger: AGCCCAAGGAGGAGAAGATCATCCGGGGCATTGACA...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGGATGCCTTTGCCTGTaGTGTGGTTGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDGCLCL*CGWSPG
Trigger: ACCTGGACTCCAACCACATCACAGGCAAAGGCATCC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR TCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTGTGTGGCAGGGAACCTaGGCTTCTAGAGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACVWQGT*ASRVLQ
Trigger: CTGGAGGACTCTAGAAGCTCAGGTTCCCTGCCACAC...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAAGAGAAACCTACAAGTaGCACAGACCCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPRETYK*HRPKVA
Trigger: TGCCACCTTGGGTCTGTGTCACTTGTAGGTTTCTCT...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCGTGTACCCTGGGATCTaGGGGCTTTACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSVYPGI*GLYPQD
Trigger: GTCCTGGGGGTAAAGCCCTCAGATCCCAGGGTACAC...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCCTGCTGGTCGAGGACTaGAGCTCCTTGGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSLLVED*SSLALL
Trigger: CAGAAGGGCCAAGGAGCTGCAGTCCTCGACCAGCAG...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGAGGAGCAAACCTCCTaGTGGTCGAGGACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIEEQTS*WSRTAA
Trigger: AGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTCCTC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATAAAATGGGCTGTGGCTaGCAGGGGCTATCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDKMGCG*QGLSES
Trigger: GGACTCTGATAGCCCCTGGCAGCCACAGCCCATTTT...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTCCGTCTGGTTTCTCTaGCGCAGCCCCACGGGAACA +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSSVWFL*RSPTGT
Trigger: TGTTCCCGTGGGGCTGCGGCAGAGAAACCAGACGGA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCTCCTTCTTATCCACTaGAGCCCTGACCCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACLLLIH*SPDPAL
Trigger: AAGGGCCGGGTCAGGGCTGCAGTGGATAAGAAGGAG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCCTTCTTGGTGGCCACTaGCCTCTCCTCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSLLGGH*PLLSSP
Trigger: GGGAGAGGAGAGGAGAGGGCAGTGGCCACCAAGAAG...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGAGGCTCATCAAATATaGTGGGAGCTGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSEAHQI*WELPPP
Trigger: AGGAGGAGGCAGCTCCCAGCATATTTGATGAGCCTC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCTCCTGTGCCTGCCTTTaGTCCTGCAGCCGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSSCACL*SCSRFC
Trigger: ACAAAAGCGGCTGCAGGAGCAAAGGCAGGCACAGGA...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGAGGCCTTTTGCAGCTTaGCAGCTACATGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWRPFAA*QLHGPW
Trigger: CCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCCCCTTTGGGCCCCCATaGCTCTCCATCTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIPFGPP*LSIFLP
Trigger: TGGCAGAAAGATGGAGAGGCATGGGGGCCCAAAGGG...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCTAGCACAGCGATCTTaGTTCCTAGCTGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACLAQRS*FLAGAP
Trigger: GGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCTCTGGGCCCAGTGATTaGTTAGGTGACTGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSSGPSD*LGDWGD
Trigger: GTCACCCCAGTCACCTAAGCAATCACTGGGCCCAGA...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGAGGACTGCAGCTCCTTaGCCCTTCTGTGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQRTAAP*PFCATG
Trigger: ACCTGTAGCACAGAAGGGCCAAGGAGCTGCAGTCCT...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGAGCAAACCTCCTGCTaGTCGAGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWEQTSC*SRTAAP
Trigger: AGGAGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTCTGGATGCAGCGAGTaGGCTGAGGAGCAAACCTCC +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWSGCSE*AEEQTS
Trigger: GGAGGTTTGCTCCTCAGCCCACTCGCTGCATCCAGA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGACATCTTGGCAAAATaGGCTGTGGCTGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIDILAK*AVAARG
Trigger: GCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTGTCAGCGTGTTGTTCTaGAGGAGGGCCCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPVSVLF*RRARKM
Trigger: CATCTTCCGGGCCCTCCTCCAGAACAACACGCTGAC...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTATGTGTCGCTGGTTGTaGAAGCGGAGCTCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACMCRWL*KRSSVS
Trigger: GCTGACCGAGCTCCGCTTCCACAACCAGCGACACAT...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCGGGAGTTCTTCTCCTaGGCAGGGAGGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTREFFS*AGRTLS
Trigger: AGACAAAGTCCTCCCTGCCCAGGAGAAGAACTCCCG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAATGGCAGCCAATAGCTaGTCACGGGAGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSMAANS*SREFFS
Trigger: GGAGAAGAACTCCCGTGACCAGCTATTGGCTGCCAT...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTTGGCAGATGGTGCCTaGCAGCCTGGTCCTACTGAA +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTLADGA*QPGPTE
Trigger: TTCAGTAGGACCAGGCTGCCAGGCACCATCTGCCAA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCAGGCCTGAGCAGTCATaGCATTGGCAGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTRPEQS*HWQMVP
Trigger: AGGCACCATCTGCCAATGCCATGACTGCTCAGGCCT...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCAGGCCTGAGCAGTCATaGCATTGGCAGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSRPEQS*HWQMVP
Trigger: AGGCACCATCTGCCAATGCCATGACTGCTCAGGCCT...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCCAGCTACATGGGCCCTaGACAGTGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSQLHGP*TVPSSQ
Trigger: CTGAGAAGATGGCACTGTCCAGGGCCCATGTAGCTG...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCTGGATGTGGTCCCTGTaGGACATCTTTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAWMWSL*DIFPGS
Trigger: TGATCCAGGAAAGATGTCCCACAGGGACCACATCCA...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCCCCACTCCTCCTGTCTaGAGCCTACTCCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSPTPPV*SLLPSG
Trigger: GCCTGATGGGAGTAGGCTCCAGACAGGAGGAGTGGG...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGTTCAGGACAACAGGTaGGGCACAGCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDVQDNR*GTAIHS
Trigger: GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAAC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGACCTAGTAGAGGCCTaGCCTTCTAGACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSDLVEA*PSRPGQ
Trigger: TTGTCCAGGTCTAGAAGGCCAGGCCTCTACTAGGTC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCGACACAGACCCAAGGTaGCAGTTCCACAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTDTDPR*QFHSAK
Trigger: CTTGGCACTGTGGAACTGCCACCTTGGGTCTGTGTC...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCCTGTGCTACAGGTGCTaGAGTGTTCACTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAILCYRC*SVHWTQ
Trigger: CTGCGTCCAGTGAACACTTCAGCACCTGTAGCACAG...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCTTTTCACAGAAGTTaGGCATGGCCTCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTPFHRS*AWPPGC
Trigger: ACAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCGTGTGGCAGGGAACCTaGGCTTCTAGAGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSVWQGT*ASRVLQ
Trigger: CTGGAGGACTCTAGAAGCTCAGGTTCCCTGCCACAC...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGGGTCTTCACTCACCTaGCGGCGATATTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSGSSLT*RRYLAT
Trigger: AGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGTCTTGGTCTCCACTTaGTTGCTTTCATCCATGGAC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAVLVST*LLSSMD
Trigger: GTCCATGGATGAAAGCAAGCAAGTGGAGACCAAGAC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGCTTCTCGCCACTCTTaGCACCAGCTTCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQASRHS*HQLHLC
Trigger: ACAGAGATGAAGCTGGTGGCAAGAGTGGCGAGAAGC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCACGGGTGTTTTGGTCTTaGTGTCATCCTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSRVFWS*CHPWLP
Trigger: AGGAAGCCAAGGATGACAGCAAGACCAAAACACCCG...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCAGCCGCTTTTGTCTCTaGTTGTCCATGTTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSSRFCL*LSMLRL
Trigger: CAGCCGCAACATGGACAAGCAGAGACAAAAGCGGCT...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTCCACCTTCTTGAGCTaGTTGAGGTTGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACSTFLS*LRLLER
Trigger: CCGCTCCAGCAACCTCAAGCAGCTCAAGAAGGTGGA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTCCTGGGCCTGTGACTaGTGTGAGGACCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLSWACD*CEDLAL
Trigger: CAGGGCCAGGTCCTCACAGCAGTCACAGGCCCAGGA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCCCCCAGGACTAGACTaGCCTCTGGTTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACPPGLD*PLVLVR
Trigger: TCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTCTGGGCCCAGTGATTaGTTAGGTGACTGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACSGPSD*LGDWGD
Trigger: GTCACCCCAGTCACCTAAGCAATCACTGGGCCCAGA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTGGCAAAATGGGCTGTaGCTGCCAGGGGCTATCAGA +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWWQNGL*LPGAIR
Trigger: TCTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGGTTGTACACACCCGTaGACTGTTTCTCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDGCTHP*TVSPSG
Trigger: ACCAGACGGAGAAACAGTCCACGGGTGTGTACAACC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTCTCCTCTTCCTTCTTaGTGGCCACTGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAISPLPS*WPLPSP
Trigger: AGGAGAGGGCAGTGGCCACCAAGAAGGAAGAGGAGA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCGGTTGCTGGAGCGGATaGCAGCCAATAGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSGCWSG*QPIAGH
Trigger: GTGACCAGCTATTGGCTGCCATCCGCTCCAGCAACC...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGCCTGGACTCTCCCATaGCAGAATAGGGACATCCAC +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIAWTLP*QNRDIH
Trigger: GTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTCCAGGCAGCAGGACTaGTTCAGGAGCAGACCTAGT +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACSRQQD*FRSRPS
Trigger: ACTAGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCTGGCCCTGAGCCCATaGTTAGGCAGAGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACLALSP*LGRVME
Trigger: TTCCATGACTCTGCCTAACCATGGGCTCAGGGCCAG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTGCCTGCCGCCTTCCTaGGCCTGTGACTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLCLPPS*ACDCCE
Trigger: CTCACAGCAGTCACAGGCCCAGGAAGGCGGCAGGCA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGCACAGTGCCAAGGGGTaGCAGCACCTTCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQHSAKG*QHLQEN
Trigger: ATTCTCTTGAAGGTGCTGCCACCCCTTGGCACTGTG...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTGACACAGACCCAAGGTaGCAGTTCCACAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPDTDPR*QFHSAK
Trigger: CTTGGCACTGTGGAACTGCCACCTTGGGTCTGTGTC...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACTGCCCTCTGGTTTTaGTCAGACCTAGCACAGCGA +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSTALWF*SDLAQR
Trigger: TCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGT...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGAGAAGAGTGTACCCTaGGATCTGAGGGCTTTACCC +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQEKSVP*DLRALP
Trigger: GGGTAAAGCCCTCAGATCCCAGGGTACACTCTTCTC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CAA 72 bp TGGGACATCTTTCCTGGATCACAGGCCTTTTGCAGCTaGCCAGCTACATGGGCCCTGGACAGTGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: WDIFPGSQAFCS*PATWALDSAIF
Trigger: GAAGATGGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTCCTTTTCACAGAAGTTaGGCATGGCCTCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPPFHRS*AWPPGC
Trigger: ACAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGG...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGGCAGAGTCATGGAATaGGCATCCCTGAACATGCCT +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIGRVME*ASLNMP
Trigger: AGGCATGTTCAGGGATGCTCATTCCATGACTCTGCC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGGGTCTTCACTCACCTaGCGGCGATATTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIGSSLT*RRYLAT
Trigger: AGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCATGGACATCTCCCTCTaGATAAGTTTCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAMDISL*ISFLVS
Trigger: GGAGACCAAGAAACTTATGCAGAGGGAGATGTCCAT...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTCTCCCATCCTTCCCTaGCTCCTTCTTATCCACTGC +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAISPILP*LLLIHC
Trigger: GCAGTGGATAAGAAGGAGGCAGGGAAGGATGGGAGA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTCTCCATCTCCGTCTTaGCTCCACAGATGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWSPSPS*LHRCVA
Trigger: AGCGACACATCTGTGGAGGCAAGACGGAGATGGAGA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTCCACCTTCTTGAGCTaGTTGAGGTTGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSSTFLS*LRLLER
Trigger: CCGCTCCAGCAACCTCAAGCAGCTCAAGAAGGTGGA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGGATCACAGGCCTTTTaGAGCTTGCCAGCTACATGG +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIGSQAF*SLPATW
Trigger: CCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTCCCATCAGGCACTGTaGATCCAGGCCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLSHQAL*IQATAP
Trigger: AGGGGCAGTGGCCTGGATGCACAGTGCCTGATGGGA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTCCTTTGCCTGTGATGTaGTTGGAGTCCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPPLPVM*LESRLR
Trigger: CCTCAACCTGGACTCCAACCACATCACAGGCAAAGG...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATTCTCCCATCTTCCTCTaGGTAGCTGGTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDSPIFL*VAGESE
Trigger: TTCACTCTCACCAGCTACCCAGAGGAAGATGGGAGA...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCATGGCAGCCAATAGCTaGTCACGGGAGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIMAANS*SREFFS
Trigger: GGAGAAGAACTCCCGTGACCAGCTATTGGCTGCCAT...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGACCTAGTAGAGGCCTaGCCTTCTAGACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWDLVEA*PSRPGQ
Trigger: TTGTCCAGGTCTAGAAGGCCAGGCCTCTACTAGGTC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTCCAGGCAGCAGGACTaGTTCAGGAGCAGACCTAGT +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSSRQQD*FRSRPS
Trigger: ACTAGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTTTCACCTACACCCGATaGTGGGCATGGCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPFTYTR*WAWQHC
Trigger: ACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGCTGTTGAGGCAACCTaGAGGCAGAGAAACCTACAA +
Preference number: 4 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQAVEAT*RQRNLQ
Trigger: TTGTAGGTTTCTCTGCCTCCAGGTTGCCTCAACAGC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGCTGTTGAGGCAACCTaGAGGCAGAGAAACCTACAA +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSAVEAT*RQRNLQ
Trigger: TTGTAGGTTTCTCTGCCTCCAGGTTGCCTCAACAGC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGACTGCCCTCTGGTTTTaGTCAGACCTAGCACAGCGA +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWTALWF*SDLAQR
Trigger: TCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGCTCCTTCCCCAGATCTaGGTCCCGTCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVLLPQI*VPSGAQ
Trigger: CTGGGCCCCAGACGGGACTCAGATCTGGGGAAGGAG...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGTCTTGGTCTCCACTTaGTTGCTTTCATCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSVLVST*LLSSMD
Trigger: GTCCATGGATGAAAGCAAGCAAGTGGAGACCAAGAC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGCCCTGGGCTCCACTCTaGCCCAGCACCCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVPWAPL*PSTPEN
Trigger: GTTCTCAGGGGTGCTGGGGCAGAGTGGAGCCCAGGG...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGGACTGTTTCTCCGTCTaGTTTCTCTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLDCFSV*FLCRSP
Trigger: GGGGCTGCGGCAGAGAAACCAGACGGAGAAACAGTC...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTTCTCCCATCTTCCTCTaGGTAGCTGGTGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPSPIFL*VAGESE
Trigger: TTCACTCTCACCAGCTACCCAGAGGAAGATGGGAGA...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGGGTTGCTGGAGCGGATaGCAGCCAATAGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLGCWSG*QPIAGH
Trigger: GTGACCAGCTATTGGCTGCCATCCGCTCCAGCAACC...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGTGGGACATCTTTCCTaGATCACAGGCCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWVGHLS*ITGLLQ
Trigger: CTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCAC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGGAAAATGTCTGCTTTaGCATCAAACCTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PGSQAFCSLPATWALDSAGKCLL*HQTFKS
Trigger: GGACTTGAAGGTTTGATGCCAAAGCAGACATTTTCC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCCACAGTGCCAAGGGGTaGCAGCACCTTCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSHSAKG*QHLQEN
Trigger: ATTCTCTTGAAGGTGCTGCCACCCCTTGGCACTGTG...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTGCAGTCTGAGTTGTTaGCGTTCACCTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWCSLSC*RSPQSS
Trigger: AGATGACTGAGGTGAACGTCAACAACTCAGACTGCA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGTGTAGCCCTGGGAGGTaGGGCCTGAGCAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVCSPGR*GLSSHG
Trigger: GCCATGACTGCTCAGGCCTCACCTCCCAGGGCTACA...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCACACTTTCTGAGGATGTaGATTTATTTCTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPHFLRM*IYFLAN
Trigger: GTTGGCCAAGAAATAAATTCACATCCTCAGAAAGTG...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGACCTTCAAGTCCAGCTaGTGTCTGTCCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLTFKSS*CLSHSS
Trigger: GGAGGAGTGGGACAGACAGCAGCTGGACTTGAAGGT...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTGGCAAAATGGGCTGTaGCTGCCAGGGGCTATCAGA +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLWQNGL*LPGAIR
Trigger: TCTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGTTTCTCGGGTGTTTTaGTCTTGCTGTCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWVSRVF*SCCHPW
Trigger: CCAAGGATGACAGCAAGACCAAAACACCCGAGAAAC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGCTGGCCCTGAGCCCATaGTTAGGCAGAGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLLALSP*LGRVME
Trigger: TTCCATGACTCTGCCTAACCATGGGCTCAGGGCCAG...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGATTTGTGATGCAGTCTaGGTTGTTGACGTTCACCTC +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWICDAV*VVDVHL
Trigger: GAGGTGAACGTCAACAACTCAGACTGCATCACAAAT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGATGGACATCTCCCTCTaGATAAGTTTCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWMDISL*ISFLVS
Trigger: GGAGACCAAGAAACTTATGCAGAGGGAGATGTCCAT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTGGTCTCCACTTGCTTaGTTTCATCCATGGACATCT +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWWSPLA*FHPWTS
Trigger: AGATGTCCATGGATGAAAGCAAGCAAGTGGAGACCA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTTTATCCTTGTCCCTaGTCAAGCCTGTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIFYPCP*SSLCSC
Trigger: ACAGGAACACAGGCTTGAGCAGGGACAAGGATAAAA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTTCACCTACACCCGATaGTGGGCATGGCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLFTYTR*WAWQHC
Trigger: ACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGGATTGCTTAGGTGACTaGGGTGACAGGCAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLDCLGD*GDRQVG
Trigger: ACCCACTTGCCTGTCACCCCAGTCACCTAAGCAATC...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCGTGCCATCTTCTCAGTaGTGTGCTAAAAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSVPSSQ*CAKRTL
Trigger: AAGAGTCCTTTTAGCACATCACTGAGAAGATGGCAC...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCACTTTCTGAGGATGTaGATTTATTTCTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTHFLRM*IYFLAN
Trigger: GTTGGCCAAGAAATAAATTCACATCCTCAGAAAGTG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGCACCTTCAAGAGAATaGAATTCAGAAAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDAPSRE*NSERCL
Trigger: AAGGCATCTTTCTGAATTTCATTCTCTTGAAGGTGC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTGGTCTCCACTTGCTTaGTTTCATCCATGGACATCT +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSWSPLA*FHPWTS
Trigger: AGATGTCCATGGATGAAAGCAAGCAAGTGGAGACCA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGCTCCTTCTTATCCACTaGAGCCCTGACCCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVLLLIH*SPDPAL
Trigger: AAGGGCCGGGTCAGGGCTGCAGTGGATAAGAAGGAG...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTTTTATCCTTGTCCCTaGTCAAGCCTGTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSFYPCP*SSLCSC
Trigger: ACAGGAACACAGGCTTGAGCAGGGACAAGGATAAAA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGCACACAGATATGGGTaGTATTCTCCAAATAGTCAC +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWAHRYG*YSPNSH
Trigger: GTGACTATTTGGAGAATAGCACCCATATCTGTGTGC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGGTGGGACATCTTTCCTaGATCACAGGCCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLVGHLS*ITGLLQ
Trigger: CTGCAAAAGGCCTGTGATCCAGGAAAGATGTCCCAC...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTGGAAAATGTCTGCTTTaGCATCAAACCTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPGKCLL*HQTFKS
Trigger: GGACTTGAAGGTTTGATGCCAAAGCAGACATTTTCC...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGGGGTGACAGGCAAGTaGGTGGAGGGAATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVGVTGK*VEGMEK
Trigger: CTTCTCCATTCCCTCCACCCACTTGCCTGTCACCCC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTGCACCTTCAAGAGAATaGAATTCAGAAAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACAPSRE*NSERCL
Trigger: AAGGCATCTTTCTGAATTTCATTCTCTTGAAGGTGC...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTCTTGTCCAGAAACCTaGGCTCCATGTACTAAAGCA +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLSCPET*APCTKA
Trigger: TGCTTTAGTACATGGAGCTCAGGTTTCTGGACAAGA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTGCAAAATAGAATATTaGTATCCACCTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTCKIEY*YPPHRV
Trigger: AACTCTGTGAGGTGGATACCAATATTCTATTTTGCA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGAGAGAAACCTACAAGTaGCACAGACCCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVRETYK*HRPKVA
Trigger: TGCCACCTTGGGTCTGTGTCACTTGTAGGTTTCTCT...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGCAGTGGAGAGTCTTCTaGTTAGAGTTCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLQWRVF*LEFRFS
Trigger: GGAAAATCTGAACTCTAAGCAGAAGACTCTCCACTG...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR GCA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGGCACACAGATATGGGTaGTATTCTCCAAATAGTCAC +
Preference number: 4 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLAHRYG*YSPNSH
Trigger: GTGACTATTTGGAGAATAGCACCCATATCTGTGTGC...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTGTGAATTTATTTCTTaGCCAACTCAAATAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AILQIVTPLLCLPPSWACCEFIS*PTQIVW
Trigger: CCACACTATTTGAGTTGGCCAAGAAATAAATTCACA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTGTGAATTTATTTCTTaGCCAACTCAAATAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWCEFIS*PTQIVW
Trigger: CCACACTATTTGAGTTGGCCAAGAAATAAATTCACA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CCA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTGCAAAATAGAATATTaGTATCCACCTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAICKIEY*YPPHRV
Trigger: AACTCTGTGAGGTGGATACCAATATTCTATTTTGCA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGTCTTGTCCAGAAACCTaGGCTCCATGTACTAAAGCA +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVSCPET*APCTKA
Trigger: TGCTTTAGTACATGGAGCTCAGGTTTCTGGACAAGA...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR TCA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGTGCCATCTTCTCAGTaGTGTGCTAAAAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVVPSSQ*CAKRTL
Trigger: AAGAGTCCTTTTAGCACATCACTGAGAAGATGGCAC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
3UTR CAA 72 bp GTCCAGAAACCTGAGCTCCATGTACTAAAGCAAAATTaGGAGAGCCTCAGAGACAAGAAAAGGAAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VQKPELHVLKQN*ESLRDKKRKVR
Trigger: TCTCACTTTCCTTTTCTTGTCTCTGAGGCTCTCCAAATTTTGCTTTAGTACATGGAGCTCAGGTTTCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS TCA 90 bp AGGGATGGGGTGGGCAGGGTCTGTGTAGCCCTGGGAGGTGAGGCCTaGGCAGTCATGGCATTGGCAGATGGTGCCTGGCAGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: RDGVGRVCVALGGEA*AVMALADGAWQPGP
Trigger: AGGACCAGGCTGCCAGGCACCATCTGCCAATGCCATGACTGCTCAGGCCTCACCTCCCAGGGCTACACAGACCCTGCCCACCCCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAGCCTCCTCCTCCACCTaGGCCGGTCCTTCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPASSST*AGPSEG
Trigger: GCCCTCTGAAGGACCGGCCAAGGTGGAGGAGGAGGC...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS GCA 90 bp TCCCGGTTGTACACACCCGTGGACTGTTTCTCCGTCTGGTTTCTCTaGCGCAGCCCCACGGGAACACTCCCGTCTGGGTCCACCACGTCC +
Preference number: 5 (lower is better)
Translates to: SRLYTPVDCFSVWFL*RSPTGTLPSGSTTS
Trigger: GGACGTGGTGGACCCAGACGGGAGTGTTCCCGTGGGGCTGCGGCAGAGAAACCAGACGGAGAAACAGTCCACGGGTGTGTACAACCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 90 bp AGCATGGCCTCCCGGTTGTACACACCCGTGGACTGTTTCTCCGTCTaGTTTCTCTGCCGCAGCCCCACGGGAACACTCCCGTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SMASRLYTPVDCFSV*FLCRSPTGTLPSGS
Trigger: GGACCCAGACGGGAGTGTTCCCGTGGGGCTGCGGCAGAGAAACCAGACGGAGAAACAGTCCACGGGTGTGTACAACCGGGAGGCCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGCCCTGACCCGGCCCTaGTCAATGCCCCGGATGATC +
Preference number: 5 (lower is better)
Translates to: PGSQAFCSLPATWALDSAALTRP*SMPRMI
Trigger: GATCATCCGGGGCATTGACAAGGGCCGGGTCAGGGC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGCCACGGCCCCGGCCTaGGGTACCTCCAGCAGATCC +
Preference number: 5 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQATAPA*GTSSRS
Trigger: GGATCTGCTGGAGGTACCCAAGGCCGGGGCCGTGGC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 90 bp GAGCTGCCTCCTCCTCCACCTTGGCCGGTCCTTCAGAGGGCTTGGTaGGGCCACTGGGCGTCTGTTTCTCGGGTGTTTTGGTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: ELPPPPPWPVLQRAW*GHWASVSRVFWSCC
Trigger: ACAGCAAGACCAAAACACCCGAGAAACAGACGCCCAGTGGCCCCACCAAGCCCTCTGAAGGACCGGCCAAGGTGGAGGAGGAGGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 90 bp GCGATCTCCATCTCCGTCTTGCCTCCACAGATGTGTCGCTGGTTGTaGAAGCGGAGCTCGGTCAGCGTGTTGTTCTGGAGGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AISISVLPPQMCRWL*KRSSVSVLFWRRAR
Trigger: CCGGGCCCTCCTCCAGAACAACACGCTGACCGAGCTCCGCTTCCACAACCAGCGACACATCTGTGGAGGCAAGACGGAGATGGAGATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 90 bp CCTCCTCCACCTTGGCCGGTCCTTCAGAGGGCTTGGTGGGGCCACTaGGCGTCTGTTTCTCGGGTGTTTTGGTCTTGCTGTCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: PPPPWPVLQRAWWGH*ASVSRVFWSCCHPW
Trigger: CCAAGGATGACAGCAAGACCAAAACACCCGAGAAACAGACGCCCAGTGGCCCCACCAAGCCCTCTGAAGGACCGGCCAAGGTGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGCCCTGACCCGGCCCTaGTCAATGCCCCGGATGATC +
Preference number: 5 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSALTRP*SMPRMI
Trigger: GATCATCCGGGGCATTGACAAGGGCCGGGTCAGGGC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATAGCTCGGTCAGCGTGTaGTTCTGGAGGAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDSSVSV*FWRRAR
Trigger: CCGGGCCCTCCTCCAGAACAACACGCTGACCGAGCT...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 90 bp TGGGCTGAGGAGCAAACCTCCTGCTGGTCGAGGACTGCAGCTCCTTaGCCCTTCTGTGCTACAGGTGCTGAAGTGTTCACTGGACGCAGC +
Preference number: 5 (lower is better)
Translates to: WAEEQTSCWSRTAAP*PFCATGAEVFTGRS
Trigger: GCTGCGTCCAGTGAACACTTCAGCACCTGTAGCACAGAAGGGCCAAGGAGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTCCTCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCATCATCGGCTCGCGTGTaGGCCAAGGCGAACAGCTTA +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPSSARV*AKANSL
Trigger: TAAGCTGTTCGCCTTGGCCAACACGCGAGCCGATGA...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp AGAACAACTCTGGCTACTGACTCCAGGCAGCAGGACTGGTTCAGGAGCAGACCTACTGGCCCAGCAGCTTaGCCCCGTGGGCTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RTTLATDSRQQDWFRSRPTGPAA*PRGLLR
Trigger: TCTGAGGAGCCCACGGGGCAAAGCTGCTGGGCCAGT...AGGTCTGCTCCTGAACCAGTCCTGCTGCCTGGAGTCAGTAGCCAGAGTTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGACTGCCCTCTGGTTTaGGTCAGACCTAGCACAGCG +
Preference number: 5 (lower is better)
Translates to: PGSQAFCSLPATWALDSADCPLV*VRPSTA
Trigger: CGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 90 bp AGCTTGGCGATCTCCATCTCCGTCTTGCCTCCACAGATGTGTCGCTaGTTGTGGAAGCGGAGCTCGGTCAGCGTGTTGTTCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SLAISISVLPPQMCR*LWKRSSVSVLFWRR
Trigger: CCTCCTCCAGAACAACACGCTGACCGAGCTCCGCTTCCACAACCAGCGACACATCTGTGGAGGCAAGACGGAGATGGAGATCGCCAAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 90 bp CTGGAGCGGATGGCAGCCAATAGCTGGTCACGGGAGTTCTTCTCCTaGGCAGGGAGGACTTTGTCTCCCATCTTCCTCTGGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LERMAANSWSREFFS*AGRTLSPIFLWVAG
Trigger: ACCAGCTACCCAGAGGAAGATGGGAGACAAAGTCCTCCCTGCCCAGGAGAAGAACTCCCGTGACCAGCTATTGGCTGCCATCCGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGAGGACTGCAGCTCCTaGGCCCTTCTGTGCTACAGG +
Preference number: 5 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDEDCSS*ALLCYR
Trigger: CCTGTAGCACAGAAGGGCCAAGGAGCTGCAGTCCTC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGGGCCCAGGGCTTTTTaGCTGGCATCTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDGPRAF*LASLPL
Trigger: AAGGGGCAGAGATGCCAGCAAAAAAGCCCTGGGCCC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCGGGCCCAGGGCTTTTTaGCTGGCATCTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSGPRAF*LASLPL
Trigger: AAGGGGCAGAGATGCCAGCAAAAAAGCCCTGGGCCC...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCAGATGTGTCGCTGGTaGTGGAAGCGGAGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTQMCRW*WKRSSV
Trigger: GACCGAGCTCCGCTTCCACAACCAGCGACACATCTG...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCCTCTGCTTGTCCATGTaGCGGCTGAGCAGATTGGTG +
Preference number: 5 (lower is better)
Translates to: PGSQAFCSLPATWALDSALCLSM*RLSRLV
Trigger: CACCAATCTGCTCAGCCGCAACATGGACAAGCAGAG...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAGGCACTTCCACCTTCTaGAGCTGCTTGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPGTSTF*SCLRLL
Trigger: CAGCAACCTCAAGCAGCTCAAGAAGGTGGAAGTGCC...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCGTGGGCATGGCAGCATaGTCAGCATTCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PGSQAFCSLPATWALDSAVGMAA*SAFLQL
Trigger: CAACTGCAGGAATGCTGACAATGCTGCCATGCCCAC...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGACTGCCCTCTGGTTTaGGTCAGACCTAGCACAGCG +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSDCPLV*VRPSTA
Trigger: CGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 90 bp GCGATATTTGGCTACTCTAGACATCTTGGCAAAATGGGCTGTGGCTaGCAGGGGCTATCAGAGTCCTGGTGGGCAGGGAAGGGAGAGGGG +
Preference number: 5 (lower is better)
Translates to: AIFGYSRHLGKMGCG*QGLSESWWAGKGEG
Trigger: CCCCTCTCCCTTCCCTGCCCACCAGGACTCTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 90 bp CTCACCTGCCGGCGATATTTGGCTACTCTAGACATCTTGGCAAAATaGGCTGTGGCTGCCAGGGGCTATCAGAGTCCTGGTGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LTCRRYLATLDILAK*AVAARGYQSPGGQG
Trigger: TCCCTGCCCACCAGGACTCTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 90 bp TTCTTGAGCTGCTTGAGGTTGCTGGAGCGGATGGCAGCCAATAGCTaGTCACGGGAGTTCTTCTCCTGGGCAGGGAGGACTTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: FLSCLRLLERMAANS*SREFFSWAGRTLSP
Trigger: GGGAGACAAAGTCCTCCCTGCCCAGGAGAAGAACTCCCGTGACCAGCTATTGGCTGCCATCCGCTCCAGCAACCTCAAGCAGCTCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCGAGGACTGCAGCTCCTaGGCCCTTCTGTGCTACAGG +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIEDCSS*ALLCYR
Trigger: CCTGTAGCACAGAAGGGCCAAGGAGCTGCAGTCCTC...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCAGCATGGCCTCCCGGTaGTACACACCCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAISMASR*YTPVDC
Trigger: ACAGTCCACGGGTGTGTACAACCGGGAGGCCATGCT...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAATGATCTTCTCCTCCTaGGGCTTCTCGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPMIFSS*GFSPLL
Trigger: CAAGAGTGGCGAGAAGCCCAAGGAGGAGAAGATCAT...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCATTGCCTGTGATGTGGTaGGAGTCCAGGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSLPVMW*ESRLRL
Trigger: CAGCCTCAACCTGGACTCCAACCACATCACAGGCAA...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCACTCCTGCAGCCGCTTTaGTCTCTGCTTGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPLLQPL*SLLVHV
Trigger: AACATGGACAAGCAGAGACAAAAGCGGCTGCAGGAG...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGCAGGCCTTTTGCAGCTaGCCAGCTACATGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWQAFCS*PATWAL
Trigger: CAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTG...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTCTGTGCCTCCTGCTGTaGAGGCAACCTGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: AILQIVTPLLCLPPSWACLCLLL*RQPGGR
Trigger: TCTGCCTCCAGGTTGCCTCAACAGCAGGAGGCACAG...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCCTGTGCCTCCTGCTGTaGAGGCAACCTGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAILCLLL*RQPGGR
Trigger: TCTGCCTCCAGGTTGCCTCAACAGCAGGAGGCACAG...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCCCTAGCACAGCGATCTaGCTTCCTAGCTGGGGCACC +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIPSTAI*LPSWGT
Trigger: GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGG...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 90 bp ATTGTTCTTCACTCTCTCCAGAGGCTCATCAAATATGCTGGGAGCTaGCTCCTCCTCCACCTTGGCCGGTCCTTCAGAGGGCTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: IVLHSLQRLIKYAGS*LLLHLGRSFRGLGG
Trigger: CCCACCAAGCCCTCTGAAGGACCGGCCAAGGTGGAGGAGGAGGCAGCTCCCAGCATATTTGATGAGCCTCTGGAGAGAGTGAAGAACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS GCA 90 bp TCCAGCAGATCCTTCTTCTCTCCCTTGGCTTCCTGTGCCTGCCTTTaGTCCTGCAGCCGCTTTTGTCTCTGCTTGTCCATGTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SSRSFFSPLASCACL*SCSRFCLCLSMLRL
Trigger: CAGCCGCAACATGGACAAGCAGAGACAAAAGCGGCTGCAGGAGCAAAGGCAGGCACAGGAAGCCAAGGGAGAGAAGAAGGATCTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 90 bp TCAAGCCTGTGTTCCTGTCACTCCCTTTCTTCTCCTCTTCCTTCTTaGTGGCCACTGCCCTCTCCTCTCCTCTCCCATCCTTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SSLCSCHSLSSPLPS*WPLPSPLLSHPSLP
Trigger: AGGCAGGGAAGGATGGGAGAGGAGAGGAGAGGGCAGTGGCCACCAAGAAGGAAGAGGAGAAGAAAGGGAGTGACAGGAACACAGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCATCCTTTTCACAGAAGTaGAGCATGGCCTCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSSFSQK*SMASRL
Trigger: CAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGGA...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGATCTCCATCTCCGTCTaGCCTCCACAGATGTGTCGC +
Preference number: 5 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQISISV*PPQMCR
Trigger: GCGACACATCTGTGGAGGCAAGACGGAGATGGAGAT...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCGCTTTTGTCTCTGCTaGTCCATGTTGCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDRFCLC*SMLRLS
Trigger: GCTCAGCCGCAACATGGACAAGCAGAGACAAAAGCG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATGGCACTTCCACCTTCTaGAGCTGCTTGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDGTSTF*SCLRLL
Trigger: CAGCAACCTCAAGCAGCTCAAGAAGGTGGAAGTGCC...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS TCA 90 bp AGCAGTCATGGCATTGGCAGATGGTGCCTGGCAGCCTGGTCCTACTaGAGCAGTTTGGGCACTTCCACCTTCTTGAGCTGCTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SSHGIGRWCLAAWSY*SSLGTSTFLSCLRL
Trigger: CAACCTCAAGCAGCTCAAGAAGGTGGAAGTGCCCAAACTGCTTCAGTAGGACCAGGCTGCCAGGCACCATCTGCCAATGCCATGACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 90 bp GACAGGGTCTCCAGCAGGCTGTCGATGTCGGGGTCTTCACTCACCTaGCGGCGATATTTGGCTACTCTAGACATCTTGGCAAAATGGGCT +
Preference number: 5 (lower is better)
Translates to: DRVSSRLSMSGSSLT*RRYLATLDILAKWA
Trigger: AGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCCCGACATCGACAGCCTGCTGGAGACCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 90 bp TTGGCTTCCTGTGCCTGCCTTTGCTCCTGCAGCCGCTTTTGTCTCTaGTTGTCCATGTTGCGGCTGAGCAGATTGGTGACAGTCATTCGG +
Preference number: 5 (lower is better)
Translates to: LASCACLCSCSRFCL*LSMLRLSRLVTVIR
Trigger: CCGAATGACTGTCACCAATCTGCTCAGCCGCAACATGGACAAGCAGAGACAAAAGCGGCTGCAGGAGCAAAGGCAGGCACAGGAAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCTACTCTAGACATCTaGGCAAAATGGGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSATLDI*AKWAVA
Trigger: AGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGC...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCATGTCTTGGTCTCCACTaGCTTGCTTTCATCCATGGA +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPCLGLH*LAFIHG
Trigger: TCCATGGATGAAAGCAAGCAAGTGGAGACCAAGACA...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCATTCTTGGCATCTGTCTaGGTCTCCACTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPFLASV*VSTCLL
Trigger: AAGCAAGCAAGTGGAGACCAAGACAGATGCCAAGAA...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGTTAAACCACCCCTCTTaGGCTCCTTCCCCAGATCTG +
Preference number: 5 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQLNHPS*APSPDL
Trigger: CAGATCTGGGGAAGGAGCCAAAGAGGGGTGGTTTAA...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGATGGCCAGGATGCCTTaGCCTGTGATGTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWMARMP*PVMWLE
Trigger: CTCCAACCACATCACAGGCAAAGGCATCCTGGCCAT...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTTGCGGCTGAGCAGATaGGTGACAGTCATTCGGGGC +
Preference number: 5 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSLRLSR*VTVIRG
Trigger: GCCCCGAATGACTGTCACCAATCTGCTCAGCCGCAA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTACCTTCTTGAGCTGCTaGAGGTTGCTGGAGCGGATG +
Preference number: 5 (lower is better)
Translates to: AILQIVTPLLCLPPSWACTFLSC*RLLERM
Trigger: CATCCGCTCCAGCAACCTCAAGCAGCTCAAGAAGGT...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTGGATCACAGGCCTTTaGCAGCTTGCCAGCTACATG +
Preference number: 5 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTWITGL*QLASYM
Trigger: CATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTGGGATCTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGGCTACTCTAGACATCTaGGCAAAATGGGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LGSEGFTPRTRLPSGFGQATLDI*AKWAVA
Trigger: AGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGC...CTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAGATCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCATTCTTGGCATCTGTCTaGGTCTCCACTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSFLASV*VSTCLL
Trigger: AAGCAAGCAAGTGGAGACCAAGACAGATGCCAAGAA...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCATCTCTCTTTTTATCCTaGTCCCTGCTCAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSSLFLS*SLLKPV
Trigger: CACAGGCTTGAGCAGGGACAAGGATAAAAAGAGAGA...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCAGGCTGGTGATGGTCTaGTTGGCCTTGAGCATGATG +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIRLVMV*LALSMM
Trigger: CATCATGCTCAAGGCCAACAAGACCATCACCAGCCT...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCTCTTTGGAGAGGGCTTaGGAGATGGTTGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSSLERA*EMVEVK
Trigger: CTTCACCTCAACCATCTCCAAAGCCCTCTCCAAAGA...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCACCTTCTTGAGCTGCTaGAGGTTGCTGGAGCGGATG +
Preference number: 5 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSTFLSC*RLLERM
Trigger: CATCCGCTCCAGCAACCTCAAGCAGCTCAAGAAGGT...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGCCTAGCACAGCGATCTaGCTTCCTAGCTGGGGCACC +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLPSTAI*LPSWGT
Trigger: GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGG...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAATCCACCTCACAGAGTaGAAGGATCAGCTGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSIHLTE*KDQLKQ
Trigger: TTGCTTCAGCTGATCCTTCAACTCTGTGAGGTGGAT...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTACCTGCCGGCGATATTaGGCTACTCTAGACATCTTG +
Preference number: 5 (lower is better)
Translates to: AILQIVTPLLCLPPSWACTCRRY*ATLDIL
Trigger: CAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGT...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCTCCTTTTCACAGAAGTaGAGCATGGCCTCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSSFSQK*SMASRL
Trigger: CAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGGA...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTGTTTCTCGGGTGTTTaGGTCTTGCTGTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTCFSGV*VLLSSL
Trigger: CAAGGATGACAGCAAGACCAAAACACCCGAGAAACA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGGTCATCTCGGGGTCATaGTTCTTCACTCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWVISGS*FFTLSR
Trigger: TCTGGAGAGAGTGAAGAACAATGACCCCGAGATGAC...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTTCCTGTGCCTGCCTTaGCTCCTGCAGCCGCTTTTG +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLFLCLP*LLQPLL
Trigger: CAAAAGCGGCTGCAGGAGCAAAGGCAGGCACAGGAA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCTTTTGGGTGAGTTCTTaGGAGAGGGCTTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTFWVSS*ERALEM
Trigger: CATCTCCAAAGCCCTCTCCAAAGAACTCACCCAAAA...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp CCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAGCCAGTACTAAAGCAAAATTaGGAGAGCCTCAGAGACAAG +
Preference number: 5 (lower is better)
Translates to: PRPGLSHGRIGTSTAGQPVLKQN*ESLRDK
Trigger: CTTGTCTCTGAGGCTCTCCAAATTTTGCTTTAGTAC...TGGCTGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCACTCTGCATAAGTTTCTaGGTCTCCTTTTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSLCISF*VSFSQK
Trigger: CTTCTGTGAAAAGGAGACCAAGAAACTTATGCAGAG...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGGTCTCCACTTGCTaGCTTTCATCCATGGACATC +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAILVSTC*LSSMDI
Trigger: GATGTCCATGGATGAAAGCAAGCAAGTGGAGACCAA...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GCTATTCTCCAAATAGTCACTCCACTTCTCTGCCTGCCGCCTTCCTGGGCCTGTTTGGTCTCCACTTGCTaGCTTTCATCCATGGACATC +
Preference number: 5 (lower is better)
Translates to: AILQIVTPLLCLPPSWACLVSTC*LSSMDI
Trigger: GATGTCCATGGATGAAAGCAAGCAAGTGGAGACCAA...ACAGGCCCAGGAAGGCGGCAGGCAGAGAAGTGGAGTGACTATTTGGAGAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTGTCTTGGTCTCCACTaGCTTGCTTTCATCCATGGA +
Preference number: 5 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWCLGLH*LAFIHG
Trigger: TCCATGGATGAAAGCAAGCAAGTGGAGACCAAGACA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTCACCTACACCCGATGGTGGGCATGGCAGCATTGTCAGCATTCCTGCAGTTGGTCTCTCTTTTTATCCTaGTCCCTGCTCAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FTYTRWWAWQHCQHSCSWSLFLS*SLLKPV
Trigger: CACAGGCTTGAGCAGGGACAAGGATAAAAAGAGAGA...CCAACTGCAGGAATGCTGACAATGCTGCCATGCCCACCATCGGGTGTAGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp TTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCACAGCGATCATGCAGTCTGAGTTGTaGACGTTCACCTCAGTCATC +
Preference number: 5 (lower is better)
Translates to: LPPGLDCPLVLVRPSTAIMQSEL*TFTSVI
Trigger: GATGACTGAGGTGAACGTCAACAACTCAGACTGCAT...GATCGCTGTGCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp TTAGGATCAGGACTCACAGTTCAGGACAACAGGTGGGGCACAGCCATTCACAGCATGGTCTTGTTGGCCTaGAGCATGATGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: LGSGLTVQDNRWGTAIHSMVLLA*SMMAMA
Trigger: TGCCATTGCCATCATGCTCAAGGCCAACAAGACCAT...GCTGTGAATGGCTGTGCCCCACCTGTTGTCCTGAACTGTGAGTCCTGATCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCAAGGAAAATGTCTGCTTaGGCATCAAACCTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSRKMSA*ASNLQV
Trigger: GACTTGAAGGTTTGATGCCAAAGCAGACATTTTCCT...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTGGATCACAGGCCTTTTGCAGCTTGCCAGCTACATGGGCCCTGGACAGTGCCCTGCAAAATAGAATATaGGTATCCACCTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: PGSQAFCSLPATWALDSALQNRI*VSTSQS
Trigger: ACTCTGTGAGGTGGATACCAATATTCTATTTTGCAG...GGCACTGTCCAGGGCCCATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGAGCATGGCCTCCCGGTaGTACACACCCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVSMASR*YTPVDC
Trigger: ACAGTCCACGGGTGTGTACAACCGGGAGGCCATGCT...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCCCACCCTCACCTCAAAGATCTCTGCATAAGTTTCTaGGTCTCCTTTTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: LAQRSCFLAGAPHPHLKDLCISF*VSFSQK
Trigger: CTTCTGTGAAAAGGAGACCAAGAAACTTATGCAGAG...ATCTTTGAGGTGAGGGTGGGGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGATGATCTTCTCCTCCTaGGGCTTCTCGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLMIFSS*GFSPLL
Trigger: CAAGAGTGGCGAGAAGCCCAAGGAGGAGAAGATCAT...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTCGGGTGTTTTGGTCTaGCTGTCATCCTTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLSGVLV*LSSLAS
Trigger: GGAAGCCAAGGATGACAGCAAGACCAAAACACCCGA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGGGAGCACCCCCTTTTTaGGGTGAGTTCTTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLGAPPF*GEFFGE
Trigger: CTCTCCAAAGAACTCACCCAAAAAAGGGGGTGCTCC...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGTTGAGCTGCTTGAGGTaGCTGGAGCGGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVLSCLR*LERMAA
Trigger: GGCTGCCATCCGCTCCAGCAACCTCAAGCAGCTCAA...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGTGGATCACAGGCCTTTaGCAGCTTGCCAGCTACATG +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLWITGL*QLASYM
Trigger: CATGTAGCTGGCAAGCTGCAAAAGGCCTGTGATCCA...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CCTCTGGTTTTGGTCAGACCTAGCACAGCGATCTTGCTTCCTAGCTGGGGCACCAGGAAAATGTCTGCTTaGGCATCAAACCTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: PLVLVRPSTAILLPSWGTRKMSA*ASNLQV
Trigger: GACTTGAAGGTTTGATGCCAAAGCAGACATTTTCCT...GGTGCCCCAGCTAGGAAGCAAGATCGCTGTGCTAGGTCTGACCAAAACCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp GTGACCCAGGCCTGGACTCTCCCATGGCAGAATAGGGACATCCACAGCAGGTCACTGCAAAATAGAATATaGGTATCCACCTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: VTQAWTLPWQNRDIHSRSLQNRI*VSTSQS
Trigger: ACTCTGTGAGGTGGATACCAATATTCTATTTTGCAG...TGACCTGCTGTGGATGTCCCTATTCTGCCATGGGAGAGTCCAGGCCTGGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGGCTTCTCGCCACTCTaGCCACCAGCTTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVGFSPL*PPASSL
Trigger: CAGAGATGAAGCTGGTGGCAAGAGTGGCGAGAAGCC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp CTGAGGGCTTTACCCCCAGGACTAGACTGCCCTCTGGTTTTGGTCAGACCTAGCAAGGGTTCATTCTTCTaGACTTTTTCATCGTCCTTT +
Preference number: 5 (lower is better)
Translates to: LRALPPGLDCPLVLVRPSKGSFF*TFSSSF
Trigger: AAAGGACGATGAAAAAGTCAAGAAGAATGAACCCTT...GCTAGGTCTGACCAAAACCAGAGGGCAGTCTAGTCCTGGGGGTAAAGCCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp ATGGGCCCTGGACAGTGCCATCTTCTCAGTGATGTGCTAAAAGGACTCTTCTTGCTAAAAGGACTCTTCTaGTCCAGAAACCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: MGPGQCHLLSDVLKGLFLLKGLF*SRNLSS
Trigger: GGAGCTCAGGTTTCTGGACAAGAAGAGTCCTTTTAG...CAAGAAGAGTCCTTTTAGCACATCACTGAGAAGATGGCACTGTCCAGGGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGTGGGCATGGCAGCATaGTCAGCATTCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVVGMAA*SAFLQL
Trigger: CAACTGCAGGAATGCTGACAATGCTGCCATGCCCAC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS TCA 90 bp CAGAGCCTCAGTAAACCGGACCAAGATCTCATTTGTGATGCAGTCTaGGTTGTTGACGTTCACCTCAGTCATCTCGGGGTCATTGTTCTT +
Preference number: 5 (lower is better)
Translates to: QSLSKPDQDLICDAV*VVDVHLSHLGVIVL
Trigger: AAGAACAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCATCACAAATGAGATCTTGGTCCGGTTTACTGAGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGTGATGCAGTCTGAGTaGTTGACGTTCACCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVVMQSE*LTFTSV
Trigger: GACTGAGGTGAACGTCAACAACTCAGACTGCATCAC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS-3UTR CAA 90 bp AGTCTTCTGCTTAGAGTTCAGATTTTCCTCCATGCTGCACTTTCTGAGGATGTGGTACTAAAGCAAAATTaGGAGAGCCTCAGAGACAAG +
Preference number: 5 (lower is better)
Translates to: SLLLRVQIFLHAALSEDVVLKQN*ESLRDK
Trigger: CTTGTCTCTGAGGCTCTCCAAATTTTGCTTTAGTAC...CACATCCTCAGAAAGTGCAGCATGGAGGAAAATCTGAACTCTAAGCAGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 72 bp CCTCCTCCACCTTGGCCGGTCCTTCAGAGGGCTTGGTaGGGCCACTGGGCGTCTGTTTCTCGGGTGTTTTGG +
Preference number: 6 (lower is better)
Translates to: PPPPWPVLQRAW*GHWASVSRVFW
Trigger: CCAAAACACCCGAGAAACAGACGCCCAGTGGCCCCACCAAGCCCTCTGAAGGACCGGCCAAGGTGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 72 bp CCTCCTCCTCCACCTTGGCCGGTCCTTCAGAGGGCTTaGTGGGGCCACTGGGCGTCTGTTTCTCGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: PPPPPWPVLQRA*WGHWASVSRVF
Trigger: AAACACCCGAGAAACAGACGCCCAGTGGCCCCACCAAGCCCTCTGAAGGACCGGCCAAGGTGGAGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS GCA 72 bp TACACACCCGTGGACTGTTTCTCCGTCTGGTTTCTCTaGCGCAGCCCCACGGGAACACTCCCGTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: YTPVDCFSVWFL*RSPTGTLPSGS
Trigger: GGACCCAGACGGGAGTGTTCCCGTGGGGCTGCGGCAGAGAAACCAGACGGAGAAACAGTCCACGGGTGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 72 bp GGATGCAGCGAGTGGGCTGAGGAGCAAACCTCCTGCTaGTCGAGGACTGCAGCTCCTTGGCCCTTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: GCSEWAEEQTSC*SRTAAPWPFCA
Trigger: AGCACAGAAGGGCCAAGGAGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTCCTCAGCCCACTCGCTGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 72 bp TCCCGGTTGTACACACCCGTGGACTGTTTCTCCGTCTaGTTTCTCTGCCGCAGCCCCACGGGAACACTCCCG +
Preference number: 6 (lower is better)
Translates to: SRLYTPVDCFSV*FLCRSPTGTLP
Trigger: CGGGAGTGTTCCCGTGGGGCTGCGGCAGAGAAACCAGACGGAGAAACAGTCCACGGGTGTGTACAACCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 72 bp TCTGGATGCAGCGAGTGGGCTGAGGAGCAAACCTCCTaGTGGTCGAGGACTGCAGCTCCTTGGCCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SGCSEWAEEQTS*WSRTAAPWPFC
Trigger: ACAGAAGGGCCAAGGAGCTGCAGTCCTCGACCAGCAGGAGGTTTGCTCCTCAGCCCACTCGCTGCATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 72 bp CCTTGGCCGGTCCTTCAGAGGGCTTGGTGGGGCCACTaGGCGTCTGTTTCTCGGGTGTTTTGGTCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: PWPVLQRAWWGH*ASVSRVFWSCC
Trigger: ACAGCAAGACCAAAACACCCGAGAAACAGACGCCCAGTGGCCCCACCAAGCCCTCTGAAGGACCGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp GCCTCCTTCTTATCCACTGCAGCCCTGACCCGGCCCTaGTCAATGCCCCGGATGATCTTCTCCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: ASFLSTAALTRP*SMPRMIFSSLG
Trigger: GCCCAAGGAGGAGAAGATCATCCGGGGCATTGACAAGGGCCGGGTCAGGGCTGCAGTGGATAAGAAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 90 bp TTGGCGATCTCCATCTCCGTCTTGCCTCCACAGATGTGTCGCTGGTaGTGGAAGCGGAGCTCGGTCAGCGTGTTGTTCTGGAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: LAISISVLPPQMCRW*WKRSSVSVLFWRRA
Trigger: GGCCCTCCTCCAGAACAACACGCTGACCGAGCTCCGCTTCCACAACCAGCGACACATCTGTGGAGGCAAGACGGAGATGGAGATCGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 72 bp TGCTTGAGGTTGCTGGAGCGGATGGCAGCCAATAGCTaGTCACGGGAGTTCTTCTCCTGGGCAGGGAGGACT +
Preference number: 6 (lower is better)
Translates to: CLRLLERMAANS*SREFFSWAGRT
Trigger: AGTCCTCCCTGCCCAGGAGAAGAACTCCCGTGACCAGCTATTGGCTGCCATCCGCTCCAGCAACCTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS TCA 72 bp GGCATTGGCAGATGGTGCCTGGCAGCCTGGTCCTACTaGAGCAGTTTGGGCACTTCCACCTTCTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: GIGRWCLAAWSY*SSLGTSTFLSC
Trigger: GCAGCTCAAGAAGGTGGAAGTGCCCAAACTGCTTCAGTAGGACCAGGCTGCCAGGCACCATCTGCCAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 72 bp GGCTACTCTAGACATCTTGGCAAAATGGGCTGTGGCTaGCAGGGGCTATCAGAGTCCTGGTGGGCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: GYSRHLGKMGCG*QGLSESWWAGK
Trigger: CTTCCCTGCCCACCAGGACTCTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CCA 72 bp ATCTCCGTCTTGCCTCCACAGATGTGTCGCTGGTTGTaGAAGCGGAGCTCGGTCAGCGTGTTGTTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ISVLPPQMCRWL*KRSSVSVLFWR
Trigger: CCTCCAGAACAACACGCTGACCGAGCTCCGCTTCCACAACCAGCGACACATCTGTGGAGGCAAGACGGAGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp CGGCCCTTGTCAATGCCCCGGATGATCTTCTCCTCCTaGGGCTTCTCGCCACTCTTGCCACCAGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: RPLSMPRMIFSS*GFSPLLPPASS
Trigger: AGATGAAGCTGGTGGCAAGAGTGGCGAGAAGCCCAAGGAGGAGAAGATCATCCGGGGCATTGACAAGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp TCCATCTCCGTCTTGCCTCCACAGATGTGTCGCTGGTaGTGGAAGCGGAGCTCGGTCAGCGTGTTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SISVLPPQMCRW*WKRSSVSVLFW
Trigger: CCAGAACAACACGCTGACCGAGCTCCGCTTCCACAACCAGCGACACATCTGTGGAGGCAAGACGGAGATGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 90 bp AGCAGGCTGTCGATGTCGGGGTCTTCACTCACCTGCCGGCGATATTaGGCTACTCTAGACATCTTGGCAAAATGGGCTGTGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRLSMSGSSLTCRRY*ATLDILAKWAVAAR
Trigger: CCTGGCAGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCCCGACATCGACAGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 90 bp CTCCAGCAGATCCTTCTTCTCTCCCTTGGCTTCCTGTGCCTGCCTTaGCTCCTGCAGCCGCTTTTGTCTCTGCTTGTCCATGTTGCGGCT +
Preference number: 6 (lower is better)
Translates to: LQQILLLSLGFLCLP*LLQPLLSLLVHVAA
Trigger: AGCCGCAACATGGACAAGCAGAGACAAAAGCGGCTGCAGGAGCAAAGGCAGGCACAGGAAGCCAAGGGAGAGAAGAAGGATCTGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CCA 72 bp ATCTCCATCTCCGTCTTGCCTCCACAGATGTGTCGCTaGTTGTGGAAGCGGAGCTCGGTCAGCGTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: ISISVLPPQMCR*LWKRSSVSVLF
Trigger: GAACAACACGCTGACCGAGCTCCGCTTCCACAACCAGCGACACATCTGTGGAGGCAAGACGGAGATGGAGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp AGTTTGGGCACTTCCACCTTCTTGAGCTGCTTGAGGTaGCTGGAGCGGATGGCAGCCAATAGCTGGTCACGG +
Preference number: 6 (lower is better)
Translates to: SLGTSTFLSCLR*LERMAANSWSR
Trigger: CCGTGACCAGCTATTGGCTGCCATCCGCTCCAGCAACCTCAAGCAGCTCAAGAAGGTGGAAGTGCCCAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 90 bp GGGTCTTCACTCACCTGCCGGCGATATTTGGCTACTCTAGACATCTaGGCAAAATGGGCTGTGGCTGCCAGGGGCTATCAGAGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: GSSLTCRRYLATLDI*AKWAVAARGYQSPG
Trigger: ACCAGGACTCTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS GCA 72 bp TCCAGCAGGCTGTCGATGTCGGGGTCTTCACTCACCTaGCGGCGATATTTGGCTACTCTAGACATCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SSRLSMSGSSLT*RRYLATLDILA
Trigger: TGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCCCGACATCGACAGCCTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp CTCACCTGCCGGCGATATTTGGCTACTCTAGACATCTaGGCAAAATGGGCTGTGGCTGCCAGGGGCTATCAG +
Preference number: 6 (lower is better)
Translates to: LTCRRYLATLDI*AKWAVAARGYQ
Trigger: CTGATAGCCCCTGGCAGCCACAGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp AGGATGCCTTTGCCTGTGATGTGGTTGGAGTCCAGGTaGAGGCTGGTGATGGTCTTGTTGGCCTTGAGCATG +
Preference number: 6 (lower is better)
Translates to: RMPLPVMWLESR*RLVMVLLALSM
Trigger: CATGCTCAAGGCCAACAAGACCATCACCAGCCTCAACCTGGACTCCAACCACATCACAGGCAAAGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp TTTTGTCTCTGCTTGTCCATGTTGCGGCTGAGCAGATaGGTGACAGTCATTCGGGGCCCGGCCAGCTCAAAA +
Preference number: 6 (lower is better)
Translates to: FCLCLSMLRLSR*VTVIRGPASSK
Trigger: TTTTGAGCTGGCCGGGCCCCGAATGACTGTCACCAATCTGCTCAGCCGCAACATGGACAAGCAGAGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 90 bp AGTTTCTTGGTCTCCTTTTCACAGAAGTTGAGCATGGCCTCCCGGTaGTACACACCCGTGGACTGTTTCTCCGTCTGGTTTCTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SFLVSFSQKLSMASR*YTPVDCFSVWFLCR
Trigger: GCGGCAGAGAAACCAGACGGAGAAACAGTCCACGGGTGTGTACAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGGAGACCAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp TCGATGTCGGGGTCTTCACTCACCTGCCGGCGATATTaGGCTACTCTAGACATCTTGGCAAAATGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SMSGSSLTCRRY*ATLDILAKWAV
Trigger: CACAGCCCATTTTGCCAAGATGTCTAGAGTAGCCAAATATCGCCGGCAGGTGAGTGAAGACCCCGACATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp GTCTCCTTTTCACAGAAGTTGAGCATGGCCTCCCGGTaGTACACACCCGTGGACTGTTTCTCCGTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: VSFSQKLSMASR*YTPVDCFSVWF
Trigger: AAACCAGACGGAGAAACAGTCCACGGGTGTGTACAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp CGGATGATCTTCTCCTCCTTGGGCTTCTCGCCACTCTaGCCACCAGCTTCATCTCTGTCTCTAGAGAAGCTT +
Preference number: 6 (lower is better)
Translates to: RMIFSSLGFSPL*PPASSLSLEKL
Trigger: AAGCTTCTCTAGAGACAGAGATGAAGCTGGTGGCAAGAGTGGCGAGAAGCCCAAGGAGGAGAAGATCATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 90 bp GACATCTCCCTCTGCATAAGTTTCTTGGTCTCCTTTTCACAGAAGTaGAGCATGGCCTCCCGGTTGTACACACCCGTGGACTGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: DISLCISFLVSFSQK*SMASRLYTPVDCFS
Trigger: GGAGAAACAGTCCACGGGTGTGTACAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGGAGACCAAGAAACTTATGCAGAGGGAGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp CTCTGCATAAGTTTCTTGGTCTCCTTTTCACAGAAGTaGAGCATGGCCTCCCGGTTGTACACACCCGTGGAC +
Preference number: 6 (lower is better)
Translates to: LCISFLVSFSQK*SMASRLYTPVD
Trigger: GTCCACGGGTGTGTACAACCGGGAGGCCATGCTCAACTTCTGTGAAAAGGAGACCAAGAAACTTATGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 72 bp TCTCTGCCCCTTTCCTCTCCATTCTTGGCATCTGTCTaGGTCTCCACTTGCTTGCTTTCATCCATGGACATC +
Preference number: 6 (lower is better)
Translates to: SLPLSSPFLASV*VSTCLLSSMDI
Trigger: GATGTCCATGGATGAAAGCAAGCAAGTGGAGACCAAGACAGATGCCAAGAATGGAGAGGAAAGGGGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 90 bp TCAATGCCCCGGATGATCTTCTCCTCCTTGGGCTTCTCGCCACTCTaGCCACCAGCTTCATCTCTGTCTCTAGAGAAGCTTTTCTTTAAA +
Preference number: 6 (lower is better)
Translates to: SMPRMIFSSLGFSPL*PPASSLSLEKLFFK
Trigger: TTTAAAGAAAAGCTTCTCTAGAGACAGAGATGAAGCTGGTGGCAAGAGTGGCGAGAAGCCCAAGGAGGAGAAGATCATCCGGGGCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367288.5
ENST00000616739.1
CDS CAA 90 bp ATGCAGTCTGAGTTGTTGACGTTCACCTCAGTCATCTCGGGGTCATaGTTCTTCACTCTCTCCAGAGGCTCATCAAATATGCTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: MQSELLTFTSVISGS*FFTLSRGSSNMLGA
Trigger: AGCTCCCAGCATATTTGATGAGCCTCTGGAGAGAGTGAAGAACAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS TCA 72 bp AGTAAACCGGACCAAGATCTCATTTGTGATGCAGTCTaGGTTGTTGACGTTCACCTCAGTCATCTCGGGGTC +
Preference number: 6 (lower is better)
Translates to: SKPDQDLICDAV*VVDVHLSHLGV
Trigger: GACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCATCACAAATGAGATCTTGGTCCGGTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp CGGACCAAGATCTCATTTGTGATGCAGTCTGAGTTGTaGACGTTCACCTCAGTCATCTCGGGGTCATTGTTC +
Preference number: 6 (lower is better)
Translates to: RTKISFVMQSEL*TFTSVISGSLF
Trigger: GAACAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCATCACAAATGAGATCTTGGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp AACCGGACCAAGATCTCATTTGTGATGCAGTCTGAGTaGTTGACGTTCACCTCAGTCATCTCGGGGTCATTG +
Preference number: 6 (lower is better)
Translates to: NRTKISFVMQSE*LTFTSVISGSL
Trigger: CAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCATCACAAATGAGATCTTGGTCCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 90 bp GCCTCAGTAAACCGGACCAAGATCTCATTTGTGATGCAGTCTGAGTaGTTGACGTTCACCTCAGTCATCTCGGGGTCATTGTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: ASVNRTKISFVMQSE*LTFTSVISGSLFFT
Trigger: AGTGAAGAACAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCATCACAAATGAGATCTTGGTCCGGTTTACTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 90 bp TCAGTAAACCGGACCAAGATCTCATTTGTGATGCAGTCTGAGTTGTaGACGTTCACCTCAGTCATCTCGGGGTCATTGTTCTTCACTCTC +
Preference number: 6 (lower is better)
Translates to: SVNRTKISFVMQSEL*TFTSVISGSLFFTL
Trigger: GAGAGTGAAGAACAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTCAGACTGCATCACAAATGAGATCTTGGTCCGGTTTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5
CDS CAA 72 bp GAGTTGTTGACGTTCACCTCAGTCATCTCGGGGTCATaGTTCTTCACTCTCTCCAGAGGCTCATCAAATATG +
Preference number: 6 (lower is better)
Translates to: ELLTFTSVISGS*FFTLSRGSSNM
Trigger: CATATTTGATGAGCCTCTGGAGAGAGTGAAGAACAATGACCCCGAGATGACTGAGGTGAACGTCAACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367288.5