Pregenerated sensors for LMO7DN-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000223458

Ensembl transcript IDs: ENST00000436872.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGGCTTGCTATTCTGCAGCAACTCCTAGCTTTGCCAGTTGCTAGCTaGGTAACCTTAGGCAGGCTACATAACCTCTGTGAGCTTCAGGAT	+
Preference number: 5 (lower is better) Translates to: RLAILQQLLALPVAS*VTLGRLHNLCELQD Trigger: ATCCTGAAGCTCACAGAGGTTATGTAGCCTGCCTAAGGTTACCCAGCTAGCAACTGGCAAAGCTAGGAGTTGCTGCAGAATAGCAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS TCA 90 bp	GATAGAAAACTGTCTACATGGGTTGTTTGTAATGATCATTTGTTCTaGTTTCTGGCCATTGTGAGTGATAGGCTTGCTATTCTGCAGCAA	+
Preference number: 5 (lower is better) Translates to: DRKLSTWVVCNDHLF*FLAIVSDRLAILQQ Trigger: TTGCTGCAGAATAGCAAGCCTATCACTCACAATGGCCAGAAATCAGAACAAATGATCATTACAAACAACCCATGTAGACAGTTTTCTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS GCA 90 bp	TTCTCCAGTGGTTTAAATCATTCTTTTCAGCCAAAGCTTTCTGATTaGTCCTTCCTATCAACTTTATTCCTCTCAGTATCAGGCACAATG	+
Preference number: 5 (lower is better) Translates to: FSSGLNHSFQPKLSD*SFLSTLFLSVSGTM Trigger: CATTGTGCCTGATACTGAGAGGAATAAAGTTGATAGGAAGGAGCAATCAGAAAGCTTTGGCTGAAAAGAATGATTTAAACCACTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS CAA 90 bp	GCCATTGTGAGTGATAGGCTTGCTATTCTGCAGCAACTCCTAGCTTaGCCAGTTGCTAGCTGGGTAACCTTAGGCAGGCTACATAACCTC	+
Preference number: 6 (lower is better) Translates to: AIVSDRLAILQQLLA*PVASWVTLGRLHNL Trigger: GAGGTTATGTAGCCTGCCTAAGGTTACCCAGCTAGCAACTGGCAAAGCTAGGAGTTGCTGCAGAATAGCAAGCCTATCACTCACAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS CAA 72 bp	AGTGATAGGCTTGCTATTCTGCAGCAACTCCTAGCTTaGCCAGTTGCTAGCTGGGTAACCTTAGGCAGGCTA	+
Preference number: 6 (lower is better) Translates to: SDRLAILQQLLA*PVASWVTLGRL Trigger: TAGCCTGCCTAAGGTTACCCAGCTAGCAACTGGCAAAGCTAGGAGTTGCTGCAGAATAGCAAGCCTATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS GCA 72 bp	ACTTCCTACTGGCCCATCTATGGACTCAAAAATCACTaGCTTACGATAGAAAACTGTCTACATGGGTTGTTT	+
Preference number: 6 (lower is better) Translates to: TSYWPIYGLKNH*LTIENCLHGLF Trigger: AAACAACCCATGTAGACAGTTTTCTATCGTAAGGCAGTGATTTTTGAGTCCATAGATGGGCCAGTAGGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS TCA 72 bp	CTGTCTACATGGGTTGTTTGTAATGATCATTTGTTCTaGTTTCTGGCCATTGTGAGTGATAGGCTTGCTATT	+
Preference number: 6 (lower is better) Translates to: LSTWVVCNDHLF*FLAIVSDRLAI Trigger: AATAGCAAGCCTATCACTCACAATGGCCAGAAATCAGAACAAATGATCATTACAAACAACCCATGTAGACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436872.2
CDS GCA 72 bp	GGTTTAAATCATTCTTTTCAGCCAAAGCTTTCTGATTaGTCCTTCCTATCAACTTTATTCCTCTCAGTATCA	+
Preference number: 6 (lower is better) Translates to: GLNHSFQPKLSD*SFLSTLFLSVS Trigger: TGATACTGAGAGGAATAAAGTTGATAGGAAGGAGCAATCAGAAAGCTTTGGCTGAAAAGAATGATTTAAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436872.2

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