Pregenerated sensors for LMO7DN (Homo sapiens)

Ensembl gene IDs: ENSG00000178734

Ensembl transcript IDs: ENST00000318245.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTTTACCAGCTTCGGCCCAAGCCTCCTCCACCAGATACAAAGCTGTaGTCCCAACTACTTGGGAGACTGAGGCGGGAGGATAGCTTGAGC	+
Preference number: 5 (lower is better) Translates to: FYQLRPKPPPPDTKL*SQLLGRLRREDSLS Trigger: GCTCAAGCTATCCTCCCGCCTCAGTCTCCCAAGTAGTTGGGACCACAGCTTTGTATCTGGTGGAGGAGGCTTGGGCCGAAGCTGGTAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS TCA 90 bp	CACTGTATCGGTTGTGACAATGAGGACTGTGATCTTCCAGCTCTCTaGGGACATCCTCCCCTAACTTCTCATTTTACCAGCTTCGGCCCA	+
Preference number: 5 (lower is better) Translates to: HCIGCDNEDCDLPAL*GHPPLTSHFTSFGP Trigger: TGGGCCGAAGCTGGTAAAATGAGAAGTTAGGGGAGGATGTCCTCAGAGAGCTGGAAGATCACAGTCCTCATTGTCACAACCGATACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS TCA 90 bp	CCAGGAAAATCCGATTCAGAGAAGGAGCAGGAGTTCTCGTCTTCCTaGGTCCATACGCCTTTGTCCAGCCAGGTCATCCTCTTTCATTTT	+
Preference number: 5 (lower is better) Translates to: PGKSDSEKEQEFSSS*VHTPLSSQVILFHF Trigger: AAAATGAAAGAGGATGACCTGGCTGGACAAAGGCGTATGGACTCAGGAAGACGAGAACTCCTGCTCCTTCTCTGAATCGGATTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS TCA 90 bp	TCATCATTCCCGAAACTGCGGTCCAAATCGATGGAATGGAAGGGTTaGTCTGGTCTCTACAGCCAGGAAAATCCGATTCAGAGAAGGAGC	+
Preference number: 5 (lower is better) Translates to: SSFPKLRSKSMEWKG*SGLYSQENPIQRRS Trigger: GCTCCTTCTCTGAATCGGATTTTCCTGGCTGTAGAGACCAGATCAACCCTTCCATTCCATCGATTTGGACCGCAGTTTCGGGAATGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS CAA 72 bp	TCCCAACTACTTGGGAGACTGAGGCGGGAGGATAGCTaGAGCCCCCTGGGAGGCCGAGGATGCAGTGAGCTG	+
Preference number: 6 (lower is better) Translates to: SQLLGRLRREDS*SPLGGRGCSEL Trigger: CAGCTCACTGCATCCTCGGCCTCCCAGGGGGCTCAAGCTATCCTCCCGCCTCAGTCTCCCAAGTAGTTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS CAA 90 bp	AAGCTGTGGTCCCAACTACTTGGGAGACTGAGGCGGGAGGATAGCTaGAGCCCCCTGGGAGGCCGAGGATGCAGTGAGCTGAGAATGTTC	+
Preference number: 6 (lower is better) Translates to: KLWSQLLGRLRREDS*SPLGGRGCSELRMF Trigger: GAACATTCTCAGCTCACTGCATCCTCGGCCTCCCAGGGGGCTCAAGCTATCCTCCCGCCTCAGTCTCCCAAGTAGTTGGGACCACAGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS TCA 72 bp	CCGAAACTGCGGTCCAAATCGATGGAATGGAAGGGTTaGTCTGGTCTCTACAGCCAGGAAAATCCGATTCAG	+
Preference number: 6 (lower is better) Translates to: PKLRSKSMEWKG*SGLYSQENPIQ Trigger: CTGAATCGGATTTTCCTGGCTGTAGAGACCAGATCAACCCTTCCATTCCATCGATTTGGACCGCAGTTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS CAA 72 bp	CCCGAAACTGCGGTCCAAATCGATGGAATGGAAGGGTaGATCTGGTCTCTACAGCCAGGAAAATCCGATTCA	+
Preference number: 6 (lower is better) Translates to: PETAVQIDGMEG*IWSLQPGKSDS Trigger: TGAATCGGATTTTCCTGGCTGTAGAGACCAGATCAACCCTTCCATTCCATCGATTTGGACCGCAGTTTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318245.5
CDS CAA 90 bp	ATCATCATTCCCGAAACTGCGGTCCAAATCGATGGAATGGAAGGGTaGATCTGGTCTCTACAGCCAGGAAAATCCGATTCAGAGAAGGAG	+
Preference number: 6 (lower is better) Translates to: IIIPETAVQIDGMEG*IWSLQPGKSDSEKE Trigger: CTCCTTCTCTGAATCGGATTTTCCTGGCTGTAGAGACCAGATCAACCCTTCCATTCCATCGATTTGGACCGCAGTTTCGGGAATGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318245.5