Pregenerated sensors for LMO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000166407Ensembl transcript IDs: ENST00000335790.8, ENST00000428101.6, ENST00000524379.1, ENST00000534484.1
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGTaGAGGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GPAWPQEGSHTDGRW*RRKGHPSHRGRRSS Trigger: AGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR GCA 90 bp | GAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTaGACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: EDGEVLMWQESGWPA*TGRVAGWPARQVGR Trigger: CCTGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| 3UTR CCA 90 bp | GGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTaGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GGRAIPPIEDGEVLM*QESGWPACTGRVAG Trigger: GCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGGCAGGCGGGCAGATaGACAGACGGGCCTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QTVQARPGPRRGHTQTGGGQAGR*TDGPGG Trigger: GCCTCCAGGCCCGTCTGTCCATCTGCCCGCCTGCCC...ACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR-3UTR CCA 90 bp | AGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGGTAGAGTGGCTGGCTaGCCGGCCAGGCAGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RLYRPGLAPGGVTHRRAVGRVAG*PARQVG Trigger: GCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACC...CACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTGGTAGAGTGGCTGGCTaGCCGGCCAGGCAGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PRRGHTQTGGGGGGRAIPGRVAG*PARQVG Trigger: GCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACC...AGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR-3UTR CCA 90 bp | TACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGCCTGCACTGGTAGAGTaGCTGGCTGGCCGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: YRRQTVQARPGPRRGHTQPALVE*LAGRPG Trigger: GCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGG...CTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGGGGCAGGCGGGCAGATaGACAGACGGGCCTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GGRAIPPIEDGEVLMWQEGQAGR*TDGPGG Trigger: GCCTCCAGGCCCGTCTGTCCATCTGCCCGCCTGCCC...CTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR-3UTR CCA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGGCAGGCGGGCAGATaGACAGACGGGCCTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: IEDGEVLMWQESGWPACTGQAGR*TDGPGG Trigger: GCCTCCAGGCCCGTCTGTCCATCTGCCCGCCTGCCC...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| 3UTR CCA 72 bp | GGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTaGCTGGCTGGCCGGCCAGGCAGGTGGGCAGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: GRRAAGQPALVE*LAGRPGRWAGG Trigger: CCCGCCTGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| 3UTR CCA 72 bp | GCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTaGTGGAGGAGGAAGGGCCATCCCTCCCATCGAGGA | + |
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Preference number: 3 (lower is better) Translates to: AWPQEGSHTDGR*WRRKGHPSHRG Trigger: TCCTCGATGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| 3UTR GCA 72 bp | GAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTaGACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: EVLMWQESGWPA*TGRVAGWPARQ Trigger: CTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| 3UTR CCA 72 bp | GAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTaGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: EDGEVLMWQESG*PACTGRVAGWP Trigger: CGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| 3UTR CCA 72 bp | GCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTaGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AIPPIEDGEVLM*QESGWPACTGR Trigger: TCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | GGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGATGGACAGACGGGCCTaGAGGCCAGGCGCCGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GPAWPQEGSHTDGRWWRRMDRRA*RPGAGR Trigger: ACGCCCGGCGCCTGGCCTCCAGGCCCGTCTGTCCAT...CCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGGGGCAGGCGGGCAGATaGACAGACGGGCCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARGQAGR*TDGPGG Trigger: GCCTCCAGGCCCGTCTGTCCATCTGCCCGCCTGCCC...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | GACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGGGTAGAGTGGCTGGCTaGCCGGCCAGGCAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: DCTGPAWPQEGSHTDGRWGRVAG*PARQVG Trigger: GCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACC...CCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | TGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCCCTGCACTGGTAGAGTaGCTGGCTGGCCGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: WQESGWPACTGRVAGWPAPALVE*LAGRPG Trigger: GCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGG...GGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCCTGCACTGGTAGAGTaGCTGGCTGGCCGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARPALVE*LAGRPG Trigger: GCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGG...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR TCA 90 bp | GGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGCGCGTCGGCACAGGATaGGGTTGGCCTTGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: GPAWPQEGSHTDGRWWRRRVGTG*GWPWCR Trigger: TCTACACCAAGGCCAACCTCATCCTGTGCCGACGCG...CCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | GGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGTGCTTCCCTTTGGGCTaGACGGAGAGCATCGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GPAWPQEGSHTDGRWWRRCFPLG*TESIGT Trigger: CGTGCCGATGCTCTCCGTCCAGCCCAAAGGGAAGCA...CCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGTGTACAGGCCCGGCCTaGCCCCAGGAGGGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: CGRRAAGQPALVEWLAGRCTGPA*PQEGSH Trigger: GTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACA...CCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | GTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGCACGCCGTCCTCCTaGTCCAACACCATGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VQARPGPRRGHTQTGGGGGTPSS*SNTMVP Trigger: CGGGACCATGGTGTTGGACCAGGAGGACGGCGTGCC...TCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428101.6 |
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| CDS-3UTR TCA 90 bp | TGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCGCGAAGCAGTCGAGGTaGTACACGTTGTCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: WQESGWPACTGRVAGWPAAKQSR*YTLSRA Trigger: GGCCCGGGACAACGTGTATCACCTCGACTGCTTCGC...GGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | GGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCATCGAACTCGGGGCGCGCTTTaGAGGGGCGGCCGGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GSHTDGRWWRRKGHPSHRTRGAL*RGGRSS Trigger: CGAAGACCGGCCGCCCCTCCAAAGCGCGCCCCGAGT...TCGATGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CCA 90 bp | AAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGATGGACAGACGGGCCTaGAGGCCAGGCGCCGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: KTDCTGPAWPQEGSHTDGMDRRA*RPGAGR Trigger: ACGCCCGGCGCCTGGCCTCCAGGCCCGTCTGTCCAT...CCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | CAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTACAGACGGGCGGTGGTaGAGGAGGAAGGGCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: QTVQARPGPRRGHTQTGGTDGRW*RRKGHP Trigger: GGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGT...ACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR GCA 90 bp | GGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGGTGGCCGTCTCCCGCTaGCTTTCTCCCTCAATGTAT | + |
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Preference number: 4 (lower is better) Translates to: GPAWPQEGSHTDGRWWRRVAVSR*LSPSMY Trigger: ATACATTGAGGGAGAAAGGCAGCGGGAGACGGCCAC...CCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CCA 90 bp | CTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGATGGACAGACGGGCCTaGAGGCCAGGCGCCGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LMWQESGWPACTGRVAGWMDRRA*RPGAGR Trigger: ACGCCCGGCGCCTGGCCTCCAGGCCCGTCTGTCCAT...CCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | GGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCAACAGACGGGCGGTGGTaGAGGAGGAAGGGCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: GGVTHRRAVVEEEGPSLPTDGRW*RRKGHP Trigger: GGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGT...TGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR TCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGGCAGATAGCGGTCCTTaGTCTTGCGGTTACAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARADSGP*SCGYSP Trigger: CGGGCTGTAACCGCAAGATCAAGGACCGCTATCTGC...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR TCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGGGCGCCGGGCGTTACTaGACTTGGGATTCAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARGAGRY*TWDSKV Trigger: CACCTTTGAATCCCAAGTTCAGTAACGCCCGGCGCC...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR GCA 90 bp | AGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCCCCGCACAGCCCTTCTaGTTCCCTTTGGGCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: RRGHTQTGGGGGGRAIPPPAQPF*FPLGWT Trigger: CGTCCAGCCCAAAGGGAAGCAGAAGGGCTGTGCGGG...GGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCT 67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGTGCTTCCCTTTGGGCTaGACGGAGAGCATCGGCACG | + |
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Preference number: 4 (lower is better) Translates to: CGRRAAGQPALVEWLAGRCFPLG*TESIGT Trigger: CGTGCCGATGCTCTCCGTCCAGCCCAAAGGGAAGCA...CCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | GACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGCCTTCTGCTTCCCTTTaGGCTGGACGGAGAGCATCG | + |
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Preference number: 4 (lower is better) Translates to: DCTGPAWPQEGSHTDGRWPSASL*AGRRAS Trigger: CGATGCTCTCCGTCCAGCCCAAAGGGAAGCAGAAGG...CCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCTCTGGTTGCAGAGCTaGCAGGCGAAGCAGTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: CGRRAAGQPALVEWLAGRLWLQS*QAKQSR Trigger: CCTCGACTGCTTCGCCTGCCAGCTCTGCAACCAGAG...CCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCGGGCAGGCGGGCAGATaGACAGACGGGCCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSHRGRRSSNVAGERLASGQAGR*TDGPGG Trigger: GCCTCCAGGCCCGTCTGTCCATCTGCCCGCCTGCCC...GCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR GCA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCACTGGGATCAGCTTGCTaGAAGCAGCACAGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AGQPALVEWLAGRPGRWALGSAC*KQHSSL Trigger: CAGGGAACTGTGCTGCTTGCAGCAAGCTGATCCCAG...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | GACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGCAGCACAGTTCCCTGTaGTGCCAAAGAGCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: DCTGPAWPQEGSHTDGRWQHSSL*CQRASG Trigger: ACCTGAGGCTCTTTGGCACCACAGGGAACTGTGCTG...CCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCACAGCACAGTTCCCTGTaGTGCCAAAGAGCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGQPALVEWLAGRPGRWAQHSSL*CQRASG Trigger: ACCTGAGGCTCTTTGGCACCACAGGGAACTGTGCTG...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | AGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCCTCTGGTTGCAGAGCTaGCAGGCGAAGCAGTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: RRGHTQTGGGGGGRAIPPLWLQS*QAKQSR Trigger: CCTCGACTGCTTCGCCTGCCAGCTCTGCAACCAGAG...GGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CCA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCACCCACACAAAATCTCTaGTTGCAGAGCTGGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: AGQPALVEWLAGRPGRWAPTQNL*LQSWQA Trigger: CGCCTGCCAGCTCTGCAACCAGAGATTTTGTGTGGG...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CCA 90 bp | TGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCGGAGAAGTTCTAATGTaGCAGGAGAGCGGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WQESGWPACTGRVAGWPAGEVLM*QESGWP Trigger: TGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCC...GGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR TCA 90 bp | GGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCAGCAGATAGCGGTCCTTaGTCTTGCGGTTACAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GGVTHRRAVVEEEGPSLPADSGP*SCGYSP Trigger: CGGGCTGTAACCGCAAGATCAAGGACCGCTATCTGC...TGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR TCA 90 bp | AGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCGCAGATAGCGGTCCTTaGTCTTGCGGTTACAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRGHTQTGGGGGGRAIPPADSGP*SCGYSP Trigger: CGGGCTGTAACCGCAAGATCAAGGACCGCTATCTGC...GGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCACAGTTCCCTGTGGTaGCAAAGAGCCTCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARHSSLW*QRASGS Trigger: ACTACCTGAGGCTCTTTGGCACCACAGGGAACTGTG...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCACAAAATCTCTGGTTaGAGAGCTGGCAGGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARHKISG*RAGRRS Trigger: GCTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTG...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR CCA 90 bp | AAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGGATGGGGGAATCTCGTaGCCGTCTCCCGCTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTDCTGPAWPQEGSHTDGDGGIS*PSPAAF Trigger: AAAGGCAGCGGGAGACGGCCACGAGATTCCCCCATC...CCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR CCA 90 bp | CAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTCCCACACAAAATCTCTaGTTGCAGAGCTGGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVQARPGPRRGHTQTGGPTQNL*LQSWQA Trigger: CGCCTGCCAGCTCTGCAACCAGAGATTTTGTGTGGG...ACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTaGCCGGCCAGGCAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IEDGEVLMWQESGWPACTGRVAG*PARQVG Trigger: GCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACC...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR TCA 90 bp | TACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGGCGAAGCAGTCGAGGTaGTACACGTTGTCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRRQTVQARPGPRRGHTQAKQSR*YTLSRA Trigger: GGCCCGGGACAACGTGTATCACCTCGACTGCTTCGC...CTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | CAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTCACAGTTCCCTGTGGTaGCAAAGAGCCTCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVQARPGPRRGHTQTGGHSSLW*QRASGS Trigger: ACTACCTGAGGCTCTTTGGCACCACAGGGAACTGTG...ACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCCTGGGATCAGCTTGCTaGAAGCAGCACAGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRGHTQTGGGGGGRAIPPLGSAC*KQHSSL Trigger: CAGGGAACTGTGCTGCTTGCAGCAAGCTGATCCCAG...GGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | CAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTCACAAAATCTCTGGTTaGAGAGCTGGCAGGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVQARPGPRRGHTQTGGHKISG*RAGRRS Trigger: GCTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTG...ACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | AAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCCTTCTGCTTCCCTTTaGGCTGGACGGAGAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KTDCTGPAWPQEGSHTDGPSASL*AGRRAS Trigger: CGATGCTCTCCGTCCAGCCCAAAGGGAAGCAGAAGG...CCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCACACAAAATCTCTaGTTGCAGAGCTGGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRRGHTQTGGGGGGRAIPPTQNL*LQSWQA Trigger: CGCCTGCCAGCTCTGCAACCAGAGATTTTGTGTGGG...AGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCACACAGACGGGCGGTaGTGGAGGAGGAAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSHRGRRSSNVAGERLASHTDGR*WRRKGH Trigger: ATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTG...GCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCAATTCAAAGGTGCCATTaGGCTGCCCTTCCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGQPALVEWLAGRPGRWAIQRCH*AALPHS Trigger: ACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAAT...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR TCA 90 bp | CAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGCGCCGGGCGTTACTaGACTTGGGATTCAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKTDCTGPAWPQEGSHTDGAGRY*TWDSKV Trigger: CACCTTTGAATCCCAAGTTCAGTAACGCCCGGCGCC...GTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | CCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCTTCCCTTTGGGCTaGACGGAGAGCATCGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PPIEDGEVLMWQESGWPACFPLG*TESIGT Trigger: CGTGCCGATGCTCTCCGTCCAGCCCAAAGGGAAGCA...GGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | GTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCATCGAGGCACCATCTCGAAGGCTaGGATCAGCTTGCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTHRRAVVEEEGPSLPSRHHLEG*DQLAAS Trigger: GCTTGCAGCAAGCTGATCCCAGCCTTCGAGATGGTG...CCTCGATGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGCCTGGTCCAACACCATaGTCCCGACGGCTCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRAIPPIEDGEVLMWQPGPTP*SRRLQP Trigger: CGGCTGGAGCCGTCGGGACCATGGTGTTGGACCAGG...CTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | ATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACCCGCACAGCCCTTCTaGTTCCCTTTGGGCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: IYRRQTVQARPGPRRGHTPAQPF*FPLGWT Trigger: CGTCCAGCCCAAAGGGAAGCAGAAGGGCTGTGCGGG...TGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | GGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCATCGACACAGTTCCCTGTGGTaGCAAAGAGCCTCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHTDGRWWRRKGHPSHRHSSLW*QRASGS Trigger: ACTACCTGAGGCTCTTTGGCACCACAGGGAACTGTG...TCGATGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | CTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGAGGCTGGGATCAGCTTaGTGCAAGCAGCACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMWQESGWPACTGRVAGWRLGSA*CKQHSS Trigger: GGAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCT...CCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR CCA 90 bp | CTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGGGAGAAGTTCTAATGTaGCAGGAGAGCGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMWQESGWPACTGRVAGWGEVLM*QESGWP Trigger: TGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCC...CCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR CCA 90 bp | CAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGAGAAGTTCTAATGTaGCAGGAGAGCGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKTDCTGPAWPQEGSHTDGEVLM*QESGWP Trigger: TGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCC...GTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCGGCACGCCTTCTAAATaGCTCAATTTGCCCAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: WQESGWPACTGRVAGWPAGTPSK*LNLPSI Trigger: TATACTGGGCAAATTGAGCCATTTAGAAGGCGTGCC...GGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534484.1 |
||
| CDS-3UTR TCA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGTCAGAGCCGTTTCTTTaGTTCTCACCTTCTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QESGWPACTGRVAGWPARSEPFL*FSPSKW Trigger: CCATTTAGAAGGTGAGAATCAAAGAAACGGCTCTGA...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCAATTCAAAGGTGCCATTaGGCTGCCCTTCCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGVTHRRAVVEEEGPSLPIQRCH*AALPHS Trigger: ACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAAT...TGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGAGGCTGGGATCAGCTTaGTGCAAGCAGCACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRRQTVQARPGPRRGHTQRLGSA*CKQHSS Trigger: GGAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCT...CTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | CAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTTTATATTCAAAGAGATaGGGGAATCTCGTGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVQARPGPRRGHTQTGGLYSKR*GNLVAV Trigger: GACGGCCACGAGATTCCCCCATCTCTTTGAATATAA...ACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCACCATCTCGAAGGCTaGGATCAGCTTGCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSHRGRRSSNVAGERLASHHLEG*DQLAAS Trigger: GCTTGCAGCAAGCTGATCCCAGCCTTCGAGATGGTG...GCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTCCTTCTGCTTCCCTTTaGGCTGGACGGAGAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IEDGEVLMWQESGWPACTPSASL*AGRRAS Trigger: CGATGCTCTCCGTCCAGCCCAAAGGGAAGCAGAAGG...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR CCA 90 bp | AATGTTCCCATTTATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGCCTGCACTGGTAGAGTaGCTGGCTGGCCGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVPIYIQKTDCTGPAWPQPALVE*LAGRPG Trigger: GCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGG...CTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATATAAATGGGAACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | AATGTTCCCATTTATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGTGTACAGGCCCGGCCTaGCCCCAGGAGGGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NVPIYIQKTDCTGPAWPQCTGPA*PQEGSH Trigger: GTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACA...CTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATATAAATGGGAACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | ATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACAAGGCTGGGATCAGCTTaGTGCAAGCAGCACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IYRRQTVQARPGPRRGHTRLGSA*CKQHSS Trigger: GGAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCT...TGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | ATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGCACAGTTCCCTGTaGTGCCAAAGAGCCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYRRQTVQARPGPRRGHTQHSSL*CQRASG Trigger: ACCTGAGGCTCTTTGGCACCACAGGGAACTGTGCTG...TGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTCACCATCTCGAAGGCTaGGATCAGCTTGCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEDGEVLMWQESGWPACTHHLEG*DQLAAS Trigger: GCTTGCAGCAAGCTGATCCCAGCCTTCGAGATGGTG...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
||
| CDS-3UTR TCA 90 bp | AATGTTCCCATTTATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGCGAAGCAGTCGAGGTaGTACACGTTGTCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVPIYIQKTDCTGPAWPQAKQSR*YTLSRA Trigger: GGCCCGGGACAACGTGTATCACCTCGACTGCTTCGC...CTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATATAAATGGGAACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGCACAAAATCTCTGGTTaGAGAGCTGGCAGGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGRAIPPIEDGEVLMWQHKISG*RAGRRS Trigger: GCTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTG...CTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | AAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGTTTGTGCCTCAGAATTaGAAGGAACTACGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTDCTGPAWPQEGSHTDGFVPQN*KELRTA Trigger: TGCAGTTCGTAGTTCCTTCCAATTCTGAGGCACAAA...CCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGGTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCGCTCTTAACCTAGATTaGACTCAGCTAGAATTACAT | + |
|
Preference number: 4 (lower is better) Translates to: RRGHTQTGGGGGGRAIPPALNLD*TQLELH Trigger: ATGTAATTCTAGCTGAGTGCAATCTAGGTTAAGAGC...GGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGACCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGATTCAAAGGTGCCATTaGGCTGCCCTTCCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGRAIPPIEDGEVLMWQIQRCH*AALPHS Trigger: ACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAAT...CTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
||
| CDS-3UTR CCA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTTTATATTCAAAGAGATaGGGGAATCTCGTGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEDGEVLMWQESGWPACTLYSKR*GNLVAV Trigger: GACGGCCACGAGATTCCCCCATCTCTTTGAATATAA...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000534484.1 |
||
| CDS-3UTR CCA 90 bp | CAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACTTCTCACCTTCTAAATaGCTCAATTTGCCCAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QKTDCTGPAWPQEGSHTDFSPSK*LNLPSI Trigger: TATACTGGGCAAATTGAGCCATTTAGAAGGTGAGAA...GTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR GCA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGAAGGAACTACGAACTaGAATTTAGAGAGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEDGEVLMWQESGWPACTEGTTN*NLEREG Trigger: TCCCTCTCTCTCTAAATTGCAGTTCGTAGTTCCTTC...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335790.8 |
||
| CDS-3UTR CCA 90 bp | CCGGAAACATTCATAAGTTTAATCCACGCCAGTAATAAAATCGCATTACATTTCGGTAGAGTGGCTGGCTaGCCGGCCAGGCAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PETFISLIHASNKIALHFGRVAG*PARQVG Trigger: GCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACC...GAAATGTAATGCGATTTTATTACTGGCGTGGATTAAACTTATGAATGTTTCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CCA 90 bp | CCGGAAACATTCATAAGTTTAATCCACGCCAGTAATAAAATCGCATTACATTTCCACACAGACGGGCGGTaGTGGAGGAGGAAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PETFISLIHASNKIALHFHTDGR*WRRKGH Trigger: ATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTG...GAAATGTAATGCGATTTTATTACTGGCGTGGATTAAACTTATGAATGTTTCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CAA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCAGACTCGGGGCGCGCTTaGGAGGGGCGGCCGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGQPALVEWLAGRPGRWADSGRA*EGRPVF Trigger: GAAGACCGGCCGCCCCTCCAAAGCGCGCCCCGAGTC...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGGGCACGCCGTCCTCCTaGTCCAGCACCATCATCTCG | + |
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Preference number: 5 (lower is better) Translates to: QESGWPACTGRVAGWPARGTPSS*SSTIIS Trigger: CGAGATGATGGTGCTGGACAAGGAGGACGGCGTGCC...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CAA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCAACACAAAATCTCTGGTaGCAGAGCTGGCAGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: AGQPALVEWLAGRPGRWATQNLW*QSWQAK Trigger: CTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTGT...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CAA 90 bp | TGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGACACAAAATCTCTGGTaGCAGAGCTGGCAGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: CGRRAAGQPALVEWLAGRTQNLW*QSWQAK Trigger: CTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTGT...CCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CAA 90 bp | GACTGTACAGGCCCGGCCTGGCCCCAGGAGGGGTCACACACAGACGGGCGGTGGCGGGCGTTACTGAACTaGGGATTCAAAGGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: DCTGPAWPQEGSHTDGRWRALLN*GFKGAI Trigger: AATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCG...CCACCGCCCGTCTGTGTGTGACCCCTCCTGGGGCCAGGCCGGGCCTGTACAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCGGGCGTTACTGAACTaGGGATTCAAAGGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: QESGWPACTGRVAGWPARRALLN*GFKGAI Trigger: AATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCG...CCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS GCA 90 bp | TCCCACACAAAATCACCACATACACACACGCAACCCGCATTTGCGTaGACGCCTCCGCCGTGCTCCTGGCCCATCCCAGCAGGCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SHTKSPHTHTQPAFA*TPPPCSWPIPAGLR Trigger: CCTGAGGCCTGCTGGGATGGGCCAGGAGCACGGCGGAGGCGTGCACGCAAATGCGGGTTGCGTGTGTGTATGTGGTGATTTTGTGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS GCA 90 bp | TCTGGGGAGTGTGTTGGGTCGGCCAGTCCAGCACTGACCTCTGGTTaGAGAGCTGGCAGGCGAAGCAGTCGAGGTGATACACGTTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SGECVGSASPALTSG*RAGRRSSRGDTRCP Trigger: GGGACAACGTGTATCACCTCGACTGCTTCGCCTGCCAGCTCTGCAACCAGAGGTCAGTGCTGGACTGGCCGACCCAACACACTCCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS GCA 90 bp | TGTCTCCCACACAAAATCACCACATACACACACGCAACCCGCATTTaGGTGCACGCCTCCGCCGTGCTCCTGGCCCATCCCAGCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CLPHKITTYTHATRI*VHASAVLLAHPSRP Trigger: AGGCCTGCTGGGATGGGCCAGGAGCACGGCGGAGGCGTGCACGCAAATGCGGGTTGCGTGTGTGTATGTGGTGATTTTGTGTGGGAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS-3UTR CAA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCATTTTGTGCCTCAGAATaGGAAGGAACTACGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: AGQPALVEWLAGRPGRWAFCASE*EGTTNC Trigger: GCAGTTCGTAGTTCCTTCCAATTCTGAGGCACAAAA...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CAA 90 bp | CTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGAAGGCTGGGATCAGCTaGCTGCAAGCAGCACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LMWQESGWPACTGRVAGWKAGIS*LQAAQF Trigger: GAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCTT...CCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CAA 90 bp | CTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGACACAAAATCTCTGGTaGCAGAGCTGGCAGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: LMWQESGWPACTGRVAGWTQNLW*QSWQAK Trigger: CTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTGT...CCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS-3UTR CAA 90 bp | GTCACACACAGACGGGCGGTGGTGGAGGAGGAAGGGCCATCCCTCCCATCGAGGCGGGCGTTACTGAACTaGGGATTCAAAGGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: VTHRRAVVEEEGPSLPSRRALLN*GFKGAI Trigger: AATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCG...CCTCGATGGGAGGGATGGCCCTTCCTCCTCCACCACCGCCCGTCTGTGTGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CAA 90 bp | GCTGGCCAGCCTGCACTGGTAGAGTGGCTGGCTGGCCGGCCAGGCAGGTGGGCATCTAAATGGCTCAATTaGCCCAGTATAATCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: AGQPALVEWLAGRPGRWASKWLN*PSIICL Trigger: AAGACAGATTATACTGGGCAAATTGAGCCATTTAGA...TGCCCACCTGCCTGGCCGGCCAGCCAGCCACTCTACCAGTGCAGGCTGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000534484.1 |
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| CDS-3UTR CAA 90 bp | ATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGAGCGGCTGGCCAGCCTGCACTAAGGCTGGGATCAGCTaGCTGCAAGCAGCACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: IEDGEVLMWQESGWPACTKAGIS*LQAAQF Trigger: GAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCTT...AGTGCAGGCTGGCCAGCCGCTCTCCTGCCACATTAGAACTTCTCCGTCCTCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000534484.1 |
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| CDS TCA 90 bp | GGCCAGGCGCCGGGCGTTACTGAACTTGGGATTCAAAGGTGCCATTaGGCTGCCCTTCCTCATAGTCCATCTGACACAAGATCATGTTGT | + |
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Preference number: 5 (lower is better) Translates to: GQAPGVTELGIQRCH*AALPHSPSDTRSCC Trigger: ACAACATGATCTTGTGTCAGATGGACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCGGCGCCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000524379.1 ENST00000534484.1 |
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| CDS-3UTR CAA 90 bp | AATGTTCCCATTTATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGAAGGCTGGGATCAGCTaGCTGCAAGCAGCACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: NVPIYIQKTDCTGPAWPQKAGIS*LQAAQF Trigger: GAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCTT...CTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATATAAATGGGAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335790.8 ENST00000428101.6 |
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| CDS-3UTR CAA 90 bp | GGAGGAAGGGCCATCCCTCCCATCGAGGACGGAGAAGTTCTAATGTGGCAGGAGTCTAAATGGCTCAATTaGCCCAGTATAATCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GGRAIPPIEDGEVLMWQESKWLN*PSIICL Trigger: AAGACAGATTATACTGGGCAAATTGAGCCATTTAGA...CTCCTGCCACATTAGAACTTCTCCGTCCTCGATGGGAGGGATGGCCCTTCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS-3UTR CAA 90 bp | AATGTTCCCATTTATATACAGAAGACAGACTGTACAGGCCCGGCCTGGCCCCAGCAGTCTCACCTACTTTaGTGCCTCAGAATTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: NVPIYIQKTDCTGPAWPQQSHLL*CLRIGR Trigger: CCTTCCAATTCTGAGGCACAAAAGTAGGTGAGACTG...CTGGGGCCAGGCCGGGCCTGTACAGTCTGTCTTCTGTATATAAATGGGAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS CAA 90 bp | GCAGCTAGGCTCGGCCGGGAGAAGGGCGCCGACTCGGGGCGCGCTTaGGAGGGGCGGCCGGTCTTCGGGCAGCTAGCGGGCTCTAATTAC | + |
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Preference number: 6 (lower is better) Translates to: AARLGREKGADSGRA*EGRPVFGQLAGSNY Trigger: GTAATTAGAGCCCGCTAGCTGCCCGAAGACCGGCCGCCCCTCCAAAGCGCGCCCCGAGTCGGCGCCCTTCTCCCGGCCGAGCCTAGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS CCA 72 bp | CCCAGCAGGCCTCAGGCTGGCGTCTGGGGAGTGTGTTaGGTCGGCCAGTCCAGCACTGACCTCTGGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSRPQAGVWGVC*VGQSSTDLWLQ Trigger: CTGCAACCAGAGGTCAGTGCTGGACTGGCCGACCCAACACACTCCCCAGACGCCAGCCTGAGGCCTGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS CCA 72 bp | TGCGGTTACAGCCCGCACAGCCCTTCTGCTTCCCTTTaGGCTGGACGGAGAGCATCGGCACGCCGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CGYSPHSPSASL*AGRRASARRPP Trigger: AGGAGGACGGCGTGCCGATGCTCTCCGTCCAGCCCAAAGGGAAGCAGAAGGGCTGTGCGGGCTGTAACCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000524379.1 |
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| CDS TCA 72 bp | GACAGACGGGCCTGGAGGCCAGGCGCCGGGCGTTACTaGACTTGGGATTCAAAGGTGCCATTGAGCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: DRRAWRPGAGRY*TWDSKVPLSCP Trigger: AGGGCAGCTCAATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCGGCGCCTGGCCTCCAGGCCCGTCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000524379.1 ENST00000534484.1 |
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| CDS CAA 72 bp | ACGGGCCTGGAGGCCAGGCGCCGGGCGTTACTGAACTaGGGATTCAAAGGTGCCATTGAGCTGCCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TGLEARRRALLN*GFKGAIELPFL Trigger: GAGGAAGGGCAGCTCAATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCGGCGCCTGGCCTCCAGGCCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000524379.1 ENST00000534484.1 |
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| CDS CAA 90 bp | TTGTCTCCCACACAAAATCACCACATACACACACGCAACCCGCATTaGCGTGCACGCCTCCGCCGTGCTCCTGGCCCATCCCAGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSPTQNHHIHTRNPH*RARLRRAPGPSQQA Trigger: GGCCTGCTGGGATGGGCCAGGAGCACGGCGGAGGCGTGCACGCAAATGCGGGTTGCGTGTGTGTATGTGGTGATTTTGTGTGGGAGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS GCA 72 bp | AAATCACCACATACACACACGCAACCCGCATTTGCGTaGACGCCTCCGCCGTGCTCCTGGCCCATCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KSPHTHTQPAFA*TPPPCSWPIPA Trigger: TGCTGGGATGGGCCAGGAGCACGGCGGAGGCGTGCACGCAAATGCGGGTTGCGTGTGTGTATGTGGTGATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS GCA 72 bp | TGTGTTGGGTCGGCCAGTCCAGCACTGACCTCTGGTTaGAGAGCTGGCAGGCGAAGCAGTCGAGGTGATACA | + |
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Preference number: 6 (lower is better) Translates to: CVGSASPALTSG*RAGRRSSRGDT Trigger: TGTATCACCTCGACTGCTTCGCCTGCCAGCTCTGCAACCAGAGGTCAGTGCTGGACTGGCCGACCCAACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524379.1 |
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| CDS CCA 72 bp | TGCGGTTACAGCCCGCACAGCCCTTCTGCTTCCCTTTaGGCTGGACGGAGAGCATCGGCACGCCTTCTAAAT | + |
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Preference number: 6 (lower is better) Translates to: CGYSPHSPSASL*AGRRASARLLN Trigger: ATTTAGAAGGCGTGCCGATGCTCTCCGTCCAGCCCAAAGGGAAGCAGAAGGGCTGTGCGGGCTGTAACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534484.1 |
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| CDS CAA 90 bp | GATGGACAGACGGGCCTGGAGGCCAGGCGCCGGGCGTTACTGAACTaGGGATTCAAAGGTGCCATTGAGCTGCCCTTCCTCATAGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: DGQTGLEARRRALLN*GFKGAIELPFLIVH Trigger: ATGGACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCGGCGCCTGGCCTCCAGGCCCGTCTGTCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000524379.1 ENST00000534484.1 |
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| CDS TCA 72 bp | CCGGGCGTTACTGAACTTGGGATTCAAAGGTGCCATTaGGCTGCCCTTCCTCATAGTCCATCTGACACAAGA | + |
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Preference number: 6 (lower is better) Translates to: PGVTELGIQRCH*AALPHSPSDTR Trigger: TCTTGTGTCAGATGGACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAATCCCAAGTTCAGTAACGCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000335790.8 ENST00000428101.6 ENST00000524379.1 ENST00000534484.1 |
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| CDS CAA 90 bp | CTTCGCAGATACAAAAGCAGTCTCACCTACTTTTGTGCCTCAGAATaGGAAGGAACTACGAACTGCAATTTAGAGAGAGAGGGAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LRRYKSSLTYFCASE*EGTTNCNLEREGEG Trigger: TCCCTCTCCCTCTCTCTCTAAATTGCAGTTCGTAGTTCCTTCCAATTCTGAGGCACAAAAGTAGGTGAGACTGCTTTTGTATCTGCGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS GCA 72 bp | TACTTTTGTGCCTCAGAATTGGAAGGAACTACGAACTaGAATTTAGAGAGAGAGGGAGAGGGAGAGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: YFCASELEGTTN*NLEREGEGERR Trigger: CCTTCTCTCTCCCTCTCCCTCTCTCTCTAAATTGCAGTTCGTAGTTCCTTCCAATTCTGAGGCACAAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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| CDS CAA 72 bp | AGCACTTCGCAGATACAAAAGCAGTCTCACCTACTTTaGTGCCTCAGAATTGGAAGGAACTACGAACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: STSQIQKQSHLL*CLRIGRNYELQ Trigger: TTGCAGTTCGTAGTTCCTTCCAATTCTGAGGCACAAAAGTAGGTGAGACTGCTTTTGTATCTGCGAAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335790.8 |
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