RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMNTD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185522, ENSG00000275873

Ensembl transcript IDs: ENST00000329451.8, ENST00000441853.5, ENST00000469990.1, ENST00000486629.1, ENST00000492515.1, ENST00000621319.2, ENST00000631419.1, ENST00000631522.1, ENST00000632043.1, ENST00000633856.1

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATaGTGCAGCGGACACAGCCCGCCCAGCCCCGGCGCC +
Preference number: 3 (lower is better)
Translates to: CGLLCRPRWFNK*CSGHSPPSPGA
Trigger: GGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCCCTCGCCCCAGACCGTaGCGTGGTGCCGCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAPRPRP*RGAAGP
Trigger: TGGCCCCGCGGCACCACGTCACGGTCTGGGGCGAGG...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCCTGGTCTCCGGCGACTaGCCCGGGGCTCCCGCACCC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPALVSGD*PGAPAP
Trigger: GGGTGCGGGAGCCCCGGGTCAGTCGCCGGAGACCAG...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGGCCCGGCCGGCAGCTaGTGGAGTCGGAGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAGPAGS*WSRSQR
Trigger: GCGCTGACTCCGACTCCAGCAGCTGCCGGCCGGGCC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCCCCGCACCCGGCCTTTaGGCAGGGGTCGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAPAPGL*AGVEVG
Trigger: GCCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGG...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCATGGCGGGCAGGTGCTaGGGCGCGGGGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAMAGRC*GAGISG
Trigger: CCCCGAGATCCCCGCGCCGCAGCACCTGCCCGCCAT...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGGGATGGCGGGCAGGTaGTGCGGCGCGGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAGMAGR*CGAGIS
Trigger: CGAGATCCCCGCGCCGCAGCACCTGCCCGCCATCCC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCCAGGCCCCGCGTCCCTaGTCTCCGGCGACTGACCCG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAQAPRP*SPATDP
Trigger: CGGGTCAGTCGCCGGAGACCAGGGACGCGGGGCCTG...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGCGGCTTCTTGGCGCTaGGGGTCGCCTCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAAASWR*GSPRPR
Trigger: TCTGGGGCGAGGCGACCCGCAGCGCCAAGAAGCCGC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGGCCCCTCCCGCGCGTaGAAGAGCTTCCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAGPSRA*KSFPEL
Trigger: GAGCTCGGGGAAGCTCTTCCACGCGCGGGAGGGGCC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCCTCGCCCCAGACCGTaGCGTGGTGCCGCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPPRPRP*RGAAGP
Trigger: TGGCCCCGCGGCACCACGTCACGGTCTGGGGCGAGG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGGCTGCAGGTGCGCCTaGTGGAGGTCCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAGCRCA*WRSQVT
Trigger: GGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCAGCGTGCGGGTGGTCTaGAGCAGCCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPASVRVV*SSRSSR
Trigger: CCTGGAGGAGCGGCTGCTGCAGACCACCCGCACGCT...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCCGGCGTGGGATCCGGTaGTCACTGAGGACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPARRGIR*SLRTSP
Trigger: GGGCGAGGTCCTCAGTGAGCACCGGATCCCACGCCG...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCTCGCGCAGCCGCGGATaGAGAGGAGGGGAACGGGCT +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPASRSRG*RGGERA
Trigger: AGCCCGTTCCCCTCCTCTCCATCCGCGGCTGCGCGA...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCAGGCCTGTCGGGCTCTaGAGGAGTTCCGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPARPVGL*RSSGLQ
Trigger: CTGGAGCCCGGAACTCCTGCAGAGCCCGACAGGCCT...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCGCGCAGCGGCTTCTTaGCGCTGCGGGTCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPRAAAS*RCGSPR
Trigger: GCGAGGCGACCCGCAGCGCCAAGAAGCCGCTGCGCG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCAGGCCCCGCGTCCCTaGTCTCCGGCGACTGACCCG +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPQAPRP*SPATDP
Trigger: CGGGTCAGTCGCCGGAGACCAGGGACGCGGGGCCTG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGTCCCAGGTGACCACTaGCCGACTCTTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAVPGDH*PTLAPD
Trigger: GTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGAC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAAGGPR*PLTDSC
Trigger: GCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCAGCCGCTCCTCCAGGTaGTCCTTCTCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPASRSSR*SFSHWA
Trigger: AGCCCAGTGGGAGAAGGAGCACCTGGAGGAGCGGCT...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGGGTGCCCTATCACCTaGACGAAGGAAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAGCPIT*TKEGRP
Trigger: GGGCCTGCCTTCCTTCGTGCAGGTGATAGGGCACCC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCAGGACCGGCTCGCCGTaGCTGGGTGAGTGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPARTGSP*LGEWVF
Trigger: GAAAACCCACTCACCCAGGCACGGCGAGCCGGTCCT...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCAGACCGTGACGTGGTaGCGCGGGGCCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPQTVTW*RGASSV
Trigger: CACGCTGCTGGCCCCGCGGCACCACGTCACGGTCTG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGGCTTCTTGGCGCTaGGGGTCGCCTCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPAASWR*GSPRPR
Trigger: TCTGGGGCGAGGCGACCCGCAGCGCCAAGAAGCCGC...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGGCTGCAGGTGCGCCTaGTGGAGGTCCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPGCRCA*WRSQVT
Trigger: GGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCC...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGCCCACCGCAAGGCCTaGATCTCCAGTTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAAHRKA*ISSSRC
Trigger: ACAGCGAGAACTGGAGATCCAGGCCTTGCGGTGGGC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCTGCTTCAGCACCATaGCGCTCAGGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPAASAP*RSGRPC
Trigger: GCACGGCCGACCTGAGCGGCATGGTGCTGAAGCAGC...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCGCGGGGCCAGCAGCGTaGCCGGCGGGAAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAAGPAA*PAGSGT
Trigger: TGTACCGCTTCCCGCCGGGCACGCTGCTGGCCCCGC...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCCGCACCCGGCCTTTaGGCAGGGGTCGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAPAPGL*AGVEVG
Trigger: GCCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCCGGCAGCTGCTaGAGTCGGAGTCAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAPAGSC*SRSQRP
Trigger: GGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGGGAAGCGGTCGATaGACAAGTCGGTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPAGSGR*TSRCRR
Trigger: CCGACGGCACCGACTTGTCCATCGACCGCTTCCCGC...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCTCGGGGGCTGCAGGTaGGCCTGCTGGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPALGGCR*ACWRSQ
Trigger: CTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGTCGGCCGTGCTCTCCTaGGACGGGTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPSAVLS*DGLKMR
Trigger: CCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGA...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGTGCAGGTGCGCCTGCTaGAGGTCCCAGGTGACCACT +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPCRCAC*RSQVTT
Trigger: AGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCA...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCCGGCTCGCCGTGCCTaGGTGAGTGGGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPPARRA*VSGFSG
Trigger: TCCAGAAAACCCACTCACCCAGGCACGGCGAGCCGG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCACTCGGTGTTCTTTCTaGAGCCGACAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPATRCSF*SRQSSR
Trigger: CCTGGAGGACTGTCGGCTCCAGAAAGAACACCGAGT...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCTTCAGAGAGGTCGCTTaGGTCCATCAGAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAFREVA*VHQSLC
Trigger: GCAGAGACTCTGATGGACCCAAGCGACCTCTCTGAA...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCATCGGAGGAAGCGCGGTaGTCCCGGGGCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPSEEAR*SRGGCP
Trigger: AGGGCACCCGCCCCGGGACCACCGCGCTTCCTCCGA...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCACGCGCAGCGGCTTCTTaGCGCTGCGGGTCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPRAAAS*RCGSPR
Trigger: GCGAGGCGACCCGCAGCGCCAAGAAGCCGCTGCGCG...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCACTCGGGGGCTGCAGGTaGGCCTGCTGGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPLGGCR*ACWRSQ
Trigger: CTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAG...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCGAGGAGCGGGCCAGCTaGAGGAGGCAGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAEERAS*RRQDFC
Trigger: GCAGAAGTCCTGCCTCCTGCAGCTGGCCCGCTCCTC...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCACAGACCGTGACGTGGTaGCGCGGGGCCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPQTVTW*RGASSV
Trigger: CACGCTGCTGGCCCCGCGGCACCACGTCACGGTCTG...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCATGGCGGGCAGGTGCTaGGGCGCGGGGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAMAGRC*GAGISG
Trigger: CCCCGAGATCCCCGCGCCGCAGCACCTGCCCGCCAT...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGGGATGGCGGGCAGGTaGTGCGGCGCGGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARGMAGR*CGAGIS
Trigger: CGAGATCCCCGCGCCGCAGCACCTGCCCGCCATCCC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCTGTCTGGCAGGCACGTaGGAGTCTCGGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPACLAGT*ESRGLQ
Trigger: CTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGACA...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCTTTCCAGAGGACTCTaGGCTCCCTGTGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPLSRGL*APCVQL
Trigger: CAGCTGGACACAGGGAGCCCAGAGTCCTCTGGAAAG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCCGGCCGGCAGCTGCTaGAGTCGGAGTCAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAPAGSC*SRSQRP
Trigger: GGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGG...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCTCGGAGGAAGCGCGGTaGTCCCGGGGCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTASEEAR*SRGGCP
Trigger: AGGGCACCCGCCCCGGGACCACCGCGCTTCCTCCGA...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCGGTGAGTGGGTTTTCTaGAGATCTTCTGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGSINDAADTARPAPAPAGEWVF*RSSESL
Trigger: CAGGGACTCAGAAGATCTCCAGAAAACCCACTCACC...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCCCAGACCGTGACGTaGTGCCGCGGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARPQTVT*CRGASS
Trigger: GCTGCTGGCCCCGCGGCACCACGTCACGGTCTGGGG...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCGGAGTCTCGCGGCGTaGGATCCGGTGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPARSLAA*DPVLTE
Trigger: CTCAGTGAGCACCGGATCCCACGCCGCGAGACTCCG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGGCCCCTCCCGCGCGTaGAAGAGCTTCCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPGPSRA*KSFPEL
Trigger: GAGCTCGGGGAAGCTCTTCCACGCGCGGGAGGGGCC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCTGGGGTCACCCGGGATaGCGGGCAGGTGCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAWGHPG*RAGAAA
Trigger: CGCCGCAGCACCTGCCCGCCATCCCGGGTGACCCCA...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGAGGCGACGGCAGGGTaGGGTCACCCGGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTAREATAG*GHPGWR
Trigger: CCGCCATCCCGGGTGACCCCACCCTGCCGTCGCCTC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCGTCCCAGGTGACCACTaGCCGACTCTTGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAVPGDH*PTLAPD
Trigger: GTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGAC...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCGGAGTCAGCGCCCCCTaGGCTGCTGGTGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAGVSAP*AAGVQT
Trigger: TGTCTGAACACCAGCAGCTCAGGGGGCGCTGACTCC...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCGGGAGTCTCGGGGGCTaGAGGTGCGCCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAGSLGG*RCACWR
Trigger: CCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCC...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCTCTGGGATCGTAGCATaGGGCCCACCCACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPASGIVA*GPPTRS
Trigger: GCTCCTCGTGGGTGGGCCGCATGCTACGATCCCAGA...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCAAGCCGCGCACCAGCTaGTTCAGCACCATGCCGCTC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAKPRTS*FSTMPL
Trigger: GAGCGGCATGGTGCTGAAGCAGCTGGTGCGCGGCTT...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCATCGCGCAGCCGCGGATaGAGAGGAGGGGAACGGGCT +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPSRSRG*RGGERA
Trigger: AGCCCGTTCCCCTCCTCTCCATCCGCGGCTGCGCGA...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCTCGCCGTGCCTGGGTaGGTGGGTTTTCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPALAVPG*VGFLEI
Trigger: GATCTCCAGAAAACCCACTCACCCAGGCACGGCGAG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCGGATCCGGTGCTCACTaGGGACCTCGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAGSGAH*GPRPWG
Trigger: GCCCCAAGGGCGAGGTCCTCAGTGAGCACCGGATCC...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCGTTGGTTCAATAAATaGTGCAGCGGACACAGCCCG +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPRWFNK*CSGHSP
Trigger: CGGGCTGTGTCCGCTGCATCATTTATTGAACCAACG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCAGAGCAGACCACCGGTaGGGGGTGGGGCGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTARADHR*GVGRGV
Trigger: GACACCACGCCCCACCCCGCACCGGTGGTCTGCTCT...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR GCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCAGCGTGCGGGTGGTCTaGAGCAGCCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTASVRVV*SSRSSR
Trigger: CCTGGAGGAGCGGCTGCTGCAGACCACCCGCACGCT...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGTCCATCAGAGTCTCTaGCGTCACTACCTCCACACT +
Preference number: 4 (lower is better)
Translates to: VGHVGSINDAADTARPAPVHQSL*RHYLHT
Trigger: AGTGTGGAGGTAGTGACGGCAGAGACTCTGATGGAC...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGCCTGCACCAGCGCTTaGTCGGAGGAAGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARACTSA*SEEARW
Trigger: CCACCGCGCTTCCTCCGAGCAAGCGCTGGTGCAGGC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCGCCTGCACCAGCGCTTaGTCGGAGGAAGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAACTSA*SEEARW
Trigger: CCACCGCGCTTCCTCCGAGCAAGCGCTGGTGCAGGC...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAAGGCCTGTCGGGCTCTaGAGGAGTTCCGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPRPVGL*RSSGLQ
Trigger: CTGGAGCCCGGAACTCCTGCAGAGCCCGACAGGCCT...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCTGCTTCAGCACCATaGCGCTCAGGTCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPAASAP*RSGRPC
Trigger: GCACGGCCGACCTGAGCGGCATGGTGCTGAAGCAGC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCGTCCTCGCCATTCTaGATGGCCCACCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPASSPF*MAHRKA
Trigger: GGCCTTGCGGTGGGCCATCCAGAATGGCGAGGACGC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCAGGAGGCAGGACTTCTaGAAGTTCTGCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPARRQDF*KFCSSA
Trigger: GGCCGAGCTGCAGAACTTGCAGAAGTCCTGCCTCCT...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGAGGAGCGGGCCAGCTaGAGGAGGCAGGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTAREERAS*RRQDFC
Trigger: GCAGAAGTCCTGCCTCCTGCAGCTGGCCCGCTCCTC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAAGTCCCTGCTGTAGCTaGCGGCCTGCACCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPSPCCS*RPAPAL
Trigger: AAGCGCTGGTGCAGGCCGGCAGCTACAGCAGGGACT...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAAAGCCGCGCACCAGCTaGTTCAGCACCATGCCGCTC +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPKPRTS*FSTMPL
Trigger: GAGCGGCATGGTGCTGAAGCAGCTGGTGCGCGGCTT...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCTCTCCGCCGTGTTCTaGACCGACAGGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARLSAVF*TDRATR
Trigger: CCTGGTGGCCCTGTCGGTGCAGAACACGGCGGAGAG...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCAGCGGAAGCCGAATCTaGTCTCCGCCGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPASGSRI*SPPCSA
Trigger: TGCAGAACACGGCGGAGAGCAGATTCGGCTTCCGCT...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGTGGGGCGTGGTGTCTaGCAGGCACGTGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARVGRGV*QARGSL
Trigger: GAGACTCCCACGTGCCTGCCAGACACCACGCCCCAC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGCGTCCTCGCCATTCTaGATGGCCCACCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARASSPF*MAHRKA
Trigger: GGCCTTGCGGTGGGCCATCCAGAATGGCGAGGACGC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCTGCTCCTTCTCCCACTaGGCTCGCTCCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPACSFSH*ARSFCS
Trigger: GGAACAGAAGGAGCGAGCCCAGTGGGAGAAGGAGCA...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCGGAGTCTCGCGGCGTaGGATCCGGTGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARRSLAA*DPVLTE
Trigger: CTCAGTGAGCACCGGATCCCACGCCGCGAGACTCCG...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGAGGCGACGGCAGGGTaGGGTCACCCGGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTEATAG*GHPGWR
Trigger: CCGCCATCCCGGGTGACCCCACCCTGCCGTCGCCTC...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARAGGPR*PLTDSC
Trigger: GCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCTCTCCTGCGACGGGTTaGAGATGCGGACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPASPATG*RCGRTS
Trigger: AGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGA...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCAGCCGCTCCTCCAGGTaGTCCTTCTCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTASRSSR*SFSHWA
Trigger: AGCCCAGTGGGAGAAGGAGCACCTGGAGGAGCGGCT...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGGCCGGGGCTGCTTTTaGTTTGAGCTGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPGRGCF*FELGSM
Trigger: CATGGAGCCCAGCTCAAAGCAAAAGCAGCCCCGGCC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCTGCAGGTGCGCCTGCTaGAGGTCCCAGGTGACCACT +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARCRCAC*RSQVTT
Trigger: AGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCA...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGGGTCTGTGCAGGGCTaGGGCGACAGGACCGGCTCG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTGSVQG*GDRTGS
Trigger: CGAGCCGGTCCTGTCGCCCCAGCCCTGCACAGACCC...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCTCGCCGTGCCTGGGTaGGTGGGTTTTCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARLAVPG*VGFLEI
Trigger: GATCTCCAGAAAACCCACTCACCCAGGCACGGCGAG...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGGCCGGGGCTGCTTTTaGTTTGAGCTGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARGRGCF*FELGSM
Trigger: CATGGAGCCCAGCTCAAAGCAAAAGCAGCCCCGGCC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGGGCCAGCAGCGTaGCCGGCGGGAAGCGGTACA +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAAGPAA*PAGSGT
Trigger: TGTACCGCTTCCCGCCGGGCACGCTGCTGGCCCCGC...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACACGGCGTGGGATCCGGTaGTCACTGAGGACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTRRGIR*SLRTSP
Trigger: GGGCGAGGTCCTCAGTGAGCACCGGATCCCACGCCG...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCGCCCACCGCAAGGCCTaGATCTCCAGTTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAAHRKA*ISSSRC
Trigger: ACAGCGAGAACTGGAGATCCAGGCCTTGCGGTGGGC...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACACCCTGTGTCCAGCTGTaGCCAGGGCCGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTPCVQL*PGPGLL
Trigger: AAGCAGCCCCGGCCCTGGCCACAGCTGGACACAGGG...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCACTTTCCAGAGGACTCTaGGCTCCCTGTGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPLSRGL*APCVQL
Trigger: CAGCTGGACACAGGGAGCCCAGAGTCCTCTGGAAAG...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGTGCCTGGGTGAGTaGGTTTTCTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: FVGHVGSINDAADTARPAPCLGE*VFWRSS
Trigger: AGAAGATCTCCAGAAAACCCACTCACCCAGGCACGG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCATGGGGTCACCCGGGATaGCGGGCAGGTGCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAWGHPG*RAGAAA
Trigger: CGCCGCAGCACCTGCCCGCCATCCCGGGTGACCCCA...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR TCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGGGCTGCTTTTGCTTTaGGCTGGGCTCCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPGLLLL*AGLHVG
Trigger: ACCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCAGGAGGCAGGACTTCTaGAAGTTCTGCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARRRQDF*KFCSSA
Trigger: GGCCGAGCTGCAGAACTTGCAGAAGTCCTGCCTCCT...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACATGGTCCCGGGGCGGGTaGCCTATCACCTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTWSRGG*PITCTK
Trigger: CTTCGTGCAGGTGATAGGGCACCCGCCCCGGGACCA...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCTGCTCCTTCTCCCACTaGGCTCGCTCCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARCSFSH*ARSFCS
Trigger: GGAACAGAAGGAGCGAGCCCAGTGGGAGAAGGAGCA...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAACTCGGTGTTCTTTCTaGAGCCGACAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPTRCSF*SRQSSR
Trigger: CCTGGAGGACTGTCGGCTCCAGAAAGAACACCGAGT...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCACTCCACGGTCTTGTaGTGCCGCTCGGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAHSTVL*CRSECF
Trigger: AAAGCATTCCGAGCGGCATCACAAGACCGTGGAGTG...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACATCTGGGATCGTAGCATaGGGCCCACCCACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTSGIVA*GPPTRS
Trigger: GCTCCTCGTGGGTGGGCCGCATGCTACGATCCCAGA...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCATCACTACCTCCACACTaGCAGTCTGGGATCGTAGCA +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPSLPPH*QSGIVA
Trigger: TGCTACGATCCCAGACTGGCAGTGTGGAGGTAGTGA...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGTCCATCAGAGTCTCTaGCGTCACTACCTCCACACT +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPVHQSL*RHYLHT
Trigger: AGTGTGGAGGTAGTGACGGCAGAGACTCTGATGGAC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGGGTGCCCTATCACCTaGACGAAGGAAGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTGCPIT*TKEGRP
Trigger: GGGCCTGCCTTCCTTCGTGCAGGTGATAGGGCACCC...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAAGGACCGGCTCGCCGTaGCTGGGTGAGTGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTRTGSP*LGEWVF
Trigger: GAAAACCCACTCACCCAGGCACGGCGAGCCGGTCCT...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACATCGGCCGTGCTCTCCTaGGACGGGTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTSAVLS*DGLKMR
Trigger: CCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGA...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACACGATGGACAAGTCGGTaGCGTCGGCGAAGACCCTCG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTRWTSR*RRRRPS
Trigger: CGAGGGTCTTCGCCGACGGCACCGACTTGTCCATCG...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCATTCAGAGAGGTCGCTTaGGTCCATCAGAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPFREVA*VHQSLC
Trigger: GCAGAGACTCTGATGGACCCAAGCGACCTCTCTGAA...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCTTTCTGGAGATCTTCTaGGTCCCTGCTGTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVYFVGHVGSINDAADTAFLEIF*VPAVAP
Trigger: GGGAGCTACAGCAGGGACTCAGAAGATCTCCAGAAA...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621319.2
CDS-3UTR GCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCTCACTACCTCCACACTaGCAGTCTGGGATCGTAGCA +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARSLPPH*QSGIVA
Trigger: TGCTACGATCCCAGACTGGCAGTGTGGAGGTAGTGA...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCATGGTCCCGGGGCGGGTaGCCTATCACCTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAWSRGG*PITCTK
Trigger: CTTCGTGCAGGTGATAGGGCACCCGCCCCGGGACCA...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR GCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCACTCTCCGCCGTGTTCTaGACCGACAGGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDALSAVF*TDRATR
Trigger: CCTGGTGGCCCTGTCGGTGCAGAACACGGCGGAGAG...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR CCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCATGTCTGGCAGGCACGTaGGAGTCTCGGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDACLAGT*ESRGLQ
Trigger: CTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGACA...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR CCA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCATGTTCCTTCAACTCCTaGATCAGCTTCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: YFVGHVGSINDAADTARPCSFNS*ISFWTW
Trigger: CCAGGTCCAGAAGCTGATCCAGGAGTTGAAGGAACA...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACATCCACACTGCCAGTCTaGGATCGTAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTSTLPV*DRSMRP
Trigger: GGGCCGCATGCTACGATCCCAGACTGGCAGTGTGGA...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGGAAGCGGTCGATaGACAAGTCGGTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAAGSGR*TSRCRR
Trigger: CCGACGGCACCGACTTGTCCATCGACCGCTTCCCGC...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR TCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGGAGTCAGCGCCCCCTaGGCTGCTGGTGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAGVSAP*AAGVQT
Trigger: TGTCTGAACACCAGCAGCTCAGGGGGCGCTGACTCC...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR GCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCACGATGGACAAGTCGGTaGCGTCGGCGAAGACCCTCG +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDARWTSR*RRRRPS
Trigger: CGAGGGTCTTCGCCGACGGCACCGACTTGTCCATCG...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCATCAGCTTCTGGACCTaGTTCTGCAGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARISFWT*FCRSFS
Trigger: GGAGAAACTCCTGCAGAACCAGGTCCAGAAGCTGAT...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCTGTTCCTTCAACTCCTaGATCAGCTTCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VYFVGHVGSINDAADTARCSFNS*ISFWTW
Trigger: CCAGGTCCAGAAGCTGATCCAGGAGTTGAAGGAACA...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCACCGGCTCGCCGTGCCTaGGTGAGTGGGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAPARRA*VSGFSG
Trigger: TCCAGAAAACCCACTCACCCAGGCACGGCGAGCCGG...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR TCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACATGCAGGAGTTTCTCCTaGCTGTGGGAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTCRSFS*LWELLL
Trigger: CAAGAGGAGCTCCCACAGTCAGGAGAAACTCCTGCA...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGGGCTGCTTTTGCTTTaGGCTGGGCTCCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTGLLLL*AGLHVG
Trigger: ACCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCC...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR TCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACACGTTGGTTCAATAAATaGTGCAGCGGACACAGCCCG +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTRWFNK*CSGHSP
Trigger: CGGGCTGTGTCCGCTGCATCATTTATTGAACCAACG...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR GCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAAGCGGAAGCCGAATCTaGTCTCCGCCGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDASGSRI*SPPCSA
Trigger: TGCAGAACACGGCGGAGAGCAGATTCGGCTTCCGCT...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR TCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCATTTCTGGAGATCTTCTaGGTCCCTGCTGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAFLEIF*VPAVAA
Trigger: GGCAGCTACAGCAGGGACTCAGAAGATCTCCAGAAA...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR CCA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCACCGTGCCTGGGTGAGTaGGTTTTCTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAPCLGE*VFWRSS
Trigger: AGAAGATCTCCAGAAAACCCACTCACCCAGGCACGG...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS-3UTR GCA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACATCAGGTGTACAGAAATaGGGTTTACTTTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: NAVYFVGHVGSINDAADTSGVQK*GLLCRP
Trigger: TGGCCTACAAAGTAAACCGCATTTCTGTACACCTGA...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS GCA 90 bp CCCGCACCCGGCCTTTGCGCAGGGGTCGAGGTGGGCGCGGCGGCTTaGGGGTGTCGGCGCCGGGCCCGGCCTCAGGGAGCGGGAAGCGGT +
Preference number: 5 (lower is better)
Translates to: PAPGLCAGVEVGAAA*GCRRRARPQGAGSG
Trigger: ACCGCTTCCCGCTCCCTGAGGCCGGGCCCGGCGCCGACACCCGCAAGCCGCCGCGCCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 90 bp ACTGACCCGGGGCTCCCGCACCCGGCCTTTGCGCAGGGGTCGAGGTaGGCGCGGCGGCTTGCGGGTGTCGGCGCCGGGCCCGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TDPGLPHPAFAQGSR*ARRLAGVGAGPGLR
Trigger: CCTGAGGCCGGGCCCGGCGCCGACACCCGCAAGCCGCCGCGCCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGGAGCCCCGGGTCAGT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 90 bp AGTCCTCCAGGCCCAGCCCGGCCTCTGCGGGAGGCGACGGCAGGGTaGGGTCACCCGGGATGGCGGGCAGGTGCTGCGGCGCGGGGATCT +
Preference number: 5 (lower is better)
Translates to: SPPGPARPLREATAG*GHPGWRAGAAARGS
Trigger: AGATCCCCGCGCCGCAGCACCTGCCCGCCATCCCGGGTGACCCCACCCTGCCGTCGCCTCCCGCAGAGGCCGGGCTGGGCCTGGAGGACT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 90 bp GGACCTCGCCCTTGGGGCTCAGGAGCAGCGTCGCGCAGCCGCGGATaGAGAGGAGGGGAACGGGCTCCCGGCTCGAGGACGCGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: GPRPWGSGAASRSRG*RGGERAPGSRTRAA
Trigger: CGCTGCGCGCGTCCTCGAGCCGGGAGCCCGTTCCCCTCCTCTCCATCCGCGGCTGCGCGACGCTGCTCCTGAGCCCCAAGGGCGAGGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 90 bp CGGGCCCGGCCTCAGGGAGCGGGAAGCGGTCGATGGACAAGTCGGTaGCGTCGGCGAAGACCCTCGGGGCCGGAGTCTCGCGGCGTGGGA +
Preference number: 5 (lower is better)
Translates to: RARPQGAGSGRWTSR*RRRRPSGPESRGVG
Trigger: TCCCACGCCGCGAGACTCCGGCCCCGAGGGTCTTCGCCGACGGCACCGACTTGTCCATCGACCGCTTCCCGCTCCCTGAGGCCGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 90 bp GGGTGTCGGCGCCGGGCCCGGCCTCAGGGAGCGGGAAGCGGTCGATaGACAAGTCGGTGCCGTCGGCGAAGACCCTCGGGGCCGGAGTCT +
Preference number: 5 (lower is better)
Translates to: GCRRRARPQGAGSGR*TSRCRRRRPSGPES
Trigger: AGACTCCGGCCCCGAGGGTCTTCGCCGACGGCACCGACTTGTCCATCGACCGCTTCCCGCTCCCTGAGGCCGGGCCCGGCGCCGACACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS TCA 90 bp GTGGGAGTCTCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCCCGACGCCTGCCCGCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VGVSGAAGAPAGGPR*PLTDSCSRRLPAGR
Trigger: GCGGCCCGCGGGCAGGCGTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 90 bp CCCGGCGGGAAGCGGTACAGGCGCTCCGGGAAGCCGCGCACCAGCTaGTTCAGCACCATGCCGCTCAGGTCGGCCGTGCTCTCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: PGGKRYRRSGKPRTS*FSTMPLRSAVLSCD
Trigger: GTCGCAGGAGAGCACGGCCGACCTGAGCGGCATGGTGCTGAAGCAGCTGGTGCGCGGCTTCCCGGAGCGCCTGTACCGCTTCCCGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 90 bp GTGTTCTTTCTGGAGCCGACAGTCCTCCAGGCCCAGCCCGGCCTCTaGGGGAGGCGACGGCAGGGTGGGGTCACCCGGGATGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: VFFLEPTVLQAQPGL*GRRRQGGVTRDGGQ
Trigger: CTGCCCGCCATCCCGGGTGACCCCACCCTGCCGTCGCCTCCCGCAGAGGCCGGGCTGGGCCTGGAGGACTGTCGGCTCCAGAAAGAACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 90 bp GTCGGTGCCGTCGGCGAAGACCCTCGGGGCCGGAGTCTCGCGGCGTaGGATCCGGTGCTCACTGAGGACCTCGCCCTTGGGGCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: VGAVGEDPRGRSLAA*DPVLTEDLALGAQE
Trigger: CTCCTGAGCCCCAAGGGCGAGGTCCTCAGTGAGCACCGGATCCCACGCCGCGAGACTCCGGCCCCGAGGGTCTTCGCCGACGGCACCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 90 bp GGTGTCTGGCAGGCACGTGGGAGTCTCGGGGGCTGCAGGTGCGCCTaGTGGAGGTCCCAGGTGACCACTGACCGACTCTTGCTCCCGACG +
Preference number: 5 (lower is better)
Translates to: GVWQARGSLGGCRCA*WRSQVTTDRLLLPT
Trigger: CGTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 90 bp GGGCGTGGTGTCTGGCAGGCACGTGGGAGTCTCGGGGGCTGCAGGTaGGCCTGCTGGAGGTCCCAGGTGACCACTGACCGACTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GRGVWQARGSLGGCR*ACWRSQVTTDRLLL
Trigger: GAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGACACCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000492515.1
ENST00000621319.2
ENST00000631419.1
ENST00000631522.1
ENST00000633856.1
CDS CCA 90 bp GTCTGGCAGGCACGTGGGAGTCTCGGGGGCTGCAGGTGCGCCTGCTaGAGGTCCCAGGTGACCACTGACCGACTCTTGCTCCCGACGCCT +
Preference number: 5 (lower is better)
Translates to: VWQARGSLGGCRCAC*RSQVTTDRLLLPTP
Trigger: AGGCGTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS TCA 90 bp GTGGGAGTCTCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCTGAGGCCCGACCTCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: VGVSGAAGAPAGGPR*PLTDSCSEARPPSR
Trigger: CCTGCTTGGAGGTCGGGCCTCAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS GCA 90 bp GGTGCCCTATCACCTGCACGAAGGAAGGCAGGCCCGGCCGGCAGCTaGTGGAGTCGGAGTCAGCGCCCCCTGAGCTGCTGGTGTTCAGAC +
Preference number: 5 (lower is better)
Translates to: GALSPARRKAGPAGS*WSRSQRPLSCWCSD
Trigger: GTCTGAACACCAGCAGCTCAGGGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGGGCCTGCCTTCCTTCGTGCAGGTGATAGGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 90 bp GGTGTCTGGCAGGCACGTGGGAGTCTCGGGGGCTGCAGGTGCGCCTaGTGGAGGTCCCAGGTGACCACTGACCGACTCTTGCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GVWQARGSLGGCRCA*WRSQVTTDRLLLCG
Trigger: CCCACAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486629.1
ENST00000633856.1
CDS CCA 90 bp CCGGCCGGCAGCTGCTGGAGTCGGAGTCAGCGCCCCCTGAGCTGCTaGTGTTCAGACAGGGCAGGGAGCCCCACTCCACGGTCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: PAGSCWSRSQRPLSC*CSDRAGSPTPRSCD
Trigger: ATCACAAGACCGTGGAGTGGGGCTCCCTGCCCTGTCTGAACACCAGCAGCTCAGGGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS CCA 90 bp GCCCTATCACCTGCACGAAGGAAGGCAGGCCCGGCCGGCAGCTGCTaGAGTCGGAGTCAGCGCCCCCTGAGCTGCTGGTGTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: ALSPARRKAGPAGSC*SRSQRPLSCWCSDR
Trigger: CCTGTCTGAACACCAGCAGCTCAGGGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGGGCCTGCCTTCCTTCGTGCAGGTGATAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS CCA 90 bp GCTGCAGACCTCTTGGGCGGAAGCCCCGCCACCTCTTCCAGGATGTaGCAGAGCCGGGCGTCCTCGCCATTCTGGATGGCCCACCGCAAG +
Preference number: 5 (lower is better)
Translates to: AADLLGGSPATSSRM*QSRASSPFWMAHRK
Trigger: CTTGCGGTGGGCCATCCAGAATGGCGAGGACGCCCGGCTCTGCCACATCCTGGAAGAGGTGGCGGGGCTTCCGCCCAAGAGGTCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CCA 90 bp GTCTGGCAGGCACGTGGGAGTCTCGGGGGCTGCAGGTGCGCCTGCTaGAGGTCCCAGGTGACCACTGACCGACTCTTGCTCTGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: VWQARGSLGGCRCAC*RSQVTTDRLLLCGG
Trigger: TCCCCCACAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486629.1
ENST00000633856.1
CDS TCA 90 bp TCTCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTGACCACTaGCCGACTCTTGCTCTGTGGGGGACAGGAGAGCCTCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SRGLQVRLLEVPGDH*PTLALWGTGEPLPR
Trigger: CCGAGGAAGAGGCTCTCCTGTCCCCCACAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486629.1
ENST00000633856.1
CDS TCA 90 bp GTGGGAGTCTCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCTGTGGGGGACAGGAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VGVSGAAGAPAGGPR*PLTDSCSVGDRRAS
Trigger: AGAGGCTCTCCTGTCCCCCACAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486629.1
ENST00000633856.1
CDS CCA 90 bp GCGCGGGCAAGGATGAGGGTAAGGATCTGCCTCAGCGGTTGGGGTTaGGGTCAGACAGAAACCAGGAGTCCGGGCGAGGACAGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: ARARMRVRICLSGWG*GQTETRSPGEDRAG
Trigger: CCCCGCCCTGTCCTCGCCCGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS GCA 90 bp AGGCAGCTGAGGAAGCGGAAGCCGAATCTGCTCTCCGCCGTGTTCTaGACCGACAGGGCCACCAGGGGGCAGCTACGGTCCACGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RQLRKRKPNLLSAVF*TDRATRGQLRSTLF
Trigger: GAAGAGCGTGGACCGTAGCTGCCCCCTGGTGGCCCTGTCGGTGCAGAACACGGCGGAGAGCAGATTCGGCTTCCGCTTCCTCAGCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 90 bp AGGCCTGGATCTCCAGTTCTCGCTGTCTCCACAGCAGCCGCAGTGTaGGAGGGTCCAGGGACTCAAGAGCCAACTGCGGGTCGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RPGSPVLAVSTAAAV*EGPGTQEPTAGRQS
Trigger: GCTCTGCCGACCCGCAGTTGGCTCTTGAGTCCCTGGACCCTCGCACACTGCGGCTGCTGTGGAGACAGCGAGAACTGGAGATCCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000621319.2
ENST00000631419.1
ENST00000633856.1
CDS CCA 90 bp GCCACCTCTTCCAGGATGTGGCAGAGCCGGGCGTCCTCGCCATTCTaGATGGCCCACCGCAAGGCCTGGATCTCCAGTTCTCGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: ATSSRMWQSRASSPF*MAHRKAWISSSRCL
Trigger: GAGACAGCGAGAACTGGAGATCCAGGCCTTGCGGTGGGCCATCCAGAATGGCGAGGACGCCCGGCTCTGCCACATCCTGGAAGAGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000492515.1
ENST00000621319.2
ENST00000631419.1
ENST00000631522.1
ENST00000633856.1
CDS CCA 90 bp GGGTCAGCGCGGGCAAGGATGAGGGTAAGGATCTGCCTCAGCGGTTaGGGTTGGGGTCAGACAGAAACCAGGAGTCCGGGCGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GSARARMRVRICLSG*GWGQTETRSPGEDR
Trigger: CCTGTCCTCGCCCGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCGCGCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS-3UTR CAA 90 bp GTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGCTGAGGACCTCGCCCTaGGGGCTCAGGAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: VGHVGSINDAADTARPAPLRTSP*GLRSSV
Trigger: GACGCTGCTCCTGAGCCCCAAGGGCGAGGTCCTCAG...CGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS TCA 90 bp TCAGCACCATGCCGCTCAGGTCGGCCGTGCTCTCCTGCGACGGGTTaGAGATGCGGACGAACTTCTCCCGGCAGCTCACAGCCACGATCT +
Preference number: 5 (lower is better)
Translates to: SAPCRSGRPCSPATG*RCGRTSPGSSQPRS
Trigger: AGATCGTGGCTGTGAGCTGCCGGGAGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGACCTGAGCGGCATGGTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 90 bp ACCAGCTGCTTCAGCACCATGCCGCTCAGGTCGGCCGTGCTCTCCTaGGACGGGTTGAAGATGCGGACGAACTTCTCCCGGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: TSCFSTMPLRSAVLS*DGLKMRTNFSRQLT
Trigger: TGTGAGCTGCCGGGAGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGACCTGAGCGGCATGGTGCTGAAGCAGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 90 bp CTCCACGGTCTTGTGATGCCGCTCGGAATGCTTTCCAGAGGACTCTaGGCTCCCTGTGTCCAGCTGTGGCCAGGGCCGGGGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LHGLVMPLGMLSRGL*APCVQLWPGPGLLL
Trigger: CAAAAGCAGCCCCGGCCCTGGCCACAGCTGGACACAGGGAGCCCAGAGTCCTCTGGAAAGCATTCCGAGCGGCATCACAAGACCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS-3UTR CAA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCCTCTCCTGCGACGGGTaGAAGATGCGGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: VGSINDAADTARPAPAPALSCDG*KMRTNF
Trigger: GAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAG...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCTCCCGCACCCGGCCTTaGCGCAGGGGTCGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: FVGHVGSINDAADTARPASRTRP*RRGRGG
Trigger: CCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGGA...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS TCA 90 bp CTGCTGGTGTTCAGACAGGGCAGGGAGCCCCACTCCACGGTCTTGTaGTGCCGCTCGGAATGCTTTCCAGAGGACTCTGGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LLVFRQGREPHSTVL*CRSECFPEDSGLPV
Trigger: CACAGGGAGCCCAGAGTCCTCTGGAAAGCATTCCGAGCGGCATCACAAGACCGTGGAGTGGGGCTCCCTGCCCTGTCTGAACACCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS GCA 90 bp GGCCCGACCTCCAAGCAGGCCTGGGAGGGAAGGGCTGTATACCGTTaGCATGGATACCAGCACCCAGAAGGGGTGGGGCTGTTTGTTACC +
Preference number: 5 (lower is better)
Translates to: GPTSKQAWEGRAVYR*HGYQHPEGVGLFVT
Trigger: GGTAACAAACAGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTCCCTCCCAGGCCTGCTTGGAGGTCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS GCA 90 bp GATCAGGGTGGAGGGTCAGCGCGGGCAAGGATGAGGGTAAGGATCTaGCTCAGCGGTTGGGGTTGGGGTCAGACAGAAACCAGGAGTCCG +
Preference number: 5 (lower is better)
Translates to: DQGGGSARARMRVRI*LSGWGWGQTETRSP
Trigger: CGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCGCGCTGACCCTCCACCCTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS-3UTR CAA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCGCGCAGCGGCTTCTaGGCGCTGCGGGTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: YFVGHVGSINDAADTARPARSGF*ALRVAS
Trigger: CGAGGCGACCCGCAGCGCCAAGAAGCCGCTGCGCGC...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCCGGCGCCCGCCTTTCAGAGAGGTCGCTaGGGTCCATCAGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VGSINDAADTARPAPAPAFQRGR*GPSESL
Trigger: CAGAGACTCTGATGGACCCAAGCGACCTCTCTGAAA...GGCGGGCGCCGGGGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCGCGCGCAGCGGCTTCTaGGCGCTGCGGGTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: AVYFVGHVGSINDAADTAARSGF*ALRVAS
Trigger: CGAGGCGACCCGCAGCGCCAAGAAGCCGCTGCGCGC...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS CCA 90 bp GAAGGGCTGTATACCGTTGCCATGGATACCAGCACCCAGAAGGGGTaGGGCTGTTTGTTACCAGGAGCCTCCAGGGAGACCCCAGACCAG +
Preference number: 5 (lower is better)
Translates to: EGLYTVAMDTSTQKG*GCLLPGASRETPDQ
Trigger: CTGGTCTGGGGTCTCCCTGGAGGCTCCTGGTAACAAACAGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS CCA 90 bp GACCTCCAAGCAGGCCTGGGAGGGAAGGGCTGTATACCGTTGCCATaGATACCAGCACCCAGAAGGGGTGGGGCTGTTTGTTACCAGGAG +
Preference number: 5 (lower is better)
Translates to: DLQAGLGGKGCIPLP*IPAPRRGGAVCYQE
Trigger: CTCCTGGTAACAAACAGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTCCCTCCCAGGCCTGCTTGGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS-3UTR CAA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCTCCCGCACCCGGCCTTaGCGCAGGGGTCGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: AVYFVGHVGSINDAADTASRTRP*RRGRGG
Trigger: CCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGGA...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCTGTGGGAGCTCCTCTaGGGCGGAAGCCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: VYFVGHVGSINDAADTARLWELL*GGSPAT
Trigger: GGTGGCGGGGCTTCCGCCCAAGAGGAGCTCCCACAG...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCGGCCTGCACCAGCGCTaGCTCGGAGGAAGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: VYFVGHVGSINDAADTARGLHQR*LGGSAV
Trigger: CACCGCGCTTCCTCCGAGCAAGCGCTGGTGCAGGCC...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCTGAGGACCTCGCCCTaGGGGCTCAGGAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: VYFVGHVGSINDAADTARLRTSP*GLRSSV
Trigger: GACGCTGCTCCTGAGCCCCAAGGGCGAGGTCCTCAG...GCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCATGTTGGTGAAGAGGTaGGGATACCGGCGGGCAACG +
Preference number: 5 (lower is better)
Translates to: FVGHVGSINDAADTARPAMLVKR*GYRRAT
Trigger: CGTTGCCCGCCGGTATCCCAACCTCTTCACCAACAT...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCCTCTCCTGCGACGGGTaGAAGATGCGGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: FVGHVGSINDAADTARPALSCDG*KMRTNF
Trigger: GAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAG...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAGCCGAGCTGGGCTCCATGTaGGTGAAGAGGTTGGGATAC +
Preference number: 5 (lower is better)
Translates to: FVGHVGSINDAADTARPAELGSM*VKRLGY
Trigger: GTATCCCAACCTCTTCACCAACATGGAGCCCAGCTC...GGCTGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp TACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCCGCCCAATGTTGGTGAAGAGGTaGGGATACCGGCGGGCAACG +
Preference number: 5 (lower is better)
Translates to: YFVGHVGSINDAADTARPMLVKR*GYRRAT
Trigger: CGTTGCCCGCCGGTATCCCAACCTCTTCACCAACAT...TGGGCGGGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGCCGGGGCTGCTTTTGCTTaGAGCTGGGCTCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: AVYFVGHVGSINDAADTAGAAFA*SWAPCW
Trigger: CCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCCC...GGCTGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp AATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGGACACAGGGGCTGCTTTTGCTTaGAGCTGGGCTCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: NAVYFVGHVGSINDAADTGAAFA*SWAPCW
Trigger: CCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCCC...TGTGTCCGCTGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS-3UTR CAA 90 bp GTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAATAAATGATGCATTTCAGAGAGGTCGCTaGGGTCCATCAGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VYRNAVYFVGHVGSINDAFQRGR*GPSESL
Trigger: CAGAGACTCTGATGGACCCAAGCGACCTCTCTGAAA...TGCATCATTTATTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS CAA 90 bp TCCCGCACCCGGCCTTTGCGCAGGGGTCGAGGTGGGCGCGGCGGCTaGCGGGTGTCGGCGCCGGGCCCGGCCTCAGGGAGCGGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: SRTRPLRRGRGGRGG*RVSAPGPASGSGKR
Trigger: CCGCTTCCCGCTCCCTGAGGCCGGGCCCGGCGCCGACACCCGCAAGCCGCCGCGCCCACCTCGACCCCTGCGCAAAGGCCGGGTGCGGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CAA 90 bp AGGAGGGGAACGGGCTCCCGGCTCGAGGACGCGCGCAGCGGCTTCTaGGCGCTGCGGGTCGCCTCGCCCCAGACCGTGACGTGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: RRGTGSRLEDARSGF*ALRVASPQTVTWCR
Trigger: GCGGCACCACGTCACGGTCTGGGGCGAGGCGACCCGCAGCGCCAAGAAGCCGCTGCGCGCGTCCTCGAGCCGGGAGCCCGTTCCCCTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CAA 72 bp ACGGGCTCCCGGCTCGAGGACGCGCGCAGCGGCTTCTaGGCGCTGCGGGTCGCCTCGCCCCAGACCGTGACG +
Preference number: 6 (lower is better)
Translates to: TGSRLEDARSGF*ALRVASPQTVT
Trigger: CGTCACGGTCTGGGGCGAGGCGACCCGCAGCGCCAAGAAGCCGCTGCGCGCGTCCTCGAGCCGGGAGCCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 72 bp CGCCGGGCCCGGCCTCAGGGAGCGGGAAGCGGTCGATaGACAAGTCGGTGCCGTCGGCGAAGACCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: RRARPQGAGSGR*TSRCRRRRPSG
Trigger: CCCCGAGGGTCTTCGCCGACGGCACCGACTTGTCCATCGACCGCTTCCCGCTCCCTGAGGCCGGGCCCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 72 bp GAAGCGCGGTGGTCCCGGGGCGGGTGCCCTATCACCTaGACGAAGGAAGGCAGGCCCGGCCGGCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: EARWSRGGCPIT*TKEGRPGRQLL
Trigger: CAGCAGCTGCCGGCCGGGCCTGCCTTCCTTCGTGCAGGTGATAGGGCACCCGCCCCGGGACCACCGCGCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS CCA 72 bp CCTTGGGGCTCAGGAGCAGCGTCGCGCAGCCGCGGATaGAGAGGAGGGGAACGGGCTCCCGGCTCGAGGACG +
Preference number: 6 (lower is better)
Translates to: PWGSGAASRSRG*RGGERAPGSRT
Trigger: CGTCCTCGAGCCGGGAGCCCGTTCCCCTCCTCTCCATCCGCGGCTGCGCGACGCTGCTCCTGAGCCCCAAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS TCA 72 bp CTGCAGGTGCGCCTGCTGGAGGTCCCAGGTGACCACTaGCCGACTCTTGCTCCCGACGCCTGCCCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: LQVRLLEVPGDH*PTLAPDACPRA
Trigger: GGCCCGCGGGCAGGCGTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS CCA 72 bp CCGGCCTGCACCAGCGCTTGCTCGGAGGAAGCGCGGTaGTCCCGGGGCGGGTGCCCTATCACCTGCACGAAG +
Preference number: 6 (lower is better)
Translates to: PACTSACSEEAR*SRGGCPITCTK
Trigger: CTTCGTGCAGGTGATAGGGCACCCGCCCCGGGACCACCGCGCTTCCTCCGAGCAAGCGCTGGTGCAGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS TCA 72 bp TCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCCCGACGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: SGAAGAPAGGPR*PLTDSCSRRLP
Trigger: GGGCAGGCGTCGGGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 72 bp TCACCTGCACGAAGGAAGGCAGGCCCGGCCGGCAGCTaGTGGAGTCGGAGTCAGCGCCCCCTGAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SPARRKAGPAGS*WSRSQRPLSCW
Trigger: CCAGCAGCTCAGGGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGGGCCTGCCTTCCTTCGTGCAGGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 72 bp CCTCAGGGAGCGGGAAGCGGTCGATGGACAAGTCGGTaGCGTCGGCGAAGACCCTCGGGGCCGGAGTCTCGC +
Preference number: 6 (lower is better)
Translates to: PQGAGSGRWTSR*RRRRPSGPESR
Trigger: GCGAGACTCCGGCCCCGAGGGTCTTCGCCGACGGCACCGACTTGTCCATCGACCGCTTCCCGCTCCCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 72 bp CCTGCACGAAGGAAGGCAGGCCCGGCCGGCAGCTGCTaGAGTCGGAGTCAGCGCCCCCTGAGCTGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: PARRKAGPAGSC*SRSQRPLSCWC
Trigger: ACACCAGCAGCTCAGGGGGCGCTGACTCCGACTCCAGCAGCTGCCGGCCGGGCCTGCCTTCCTTCGTGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 72 bp GTCTGGCAGGCACGTGGGAGTCTCGGGGGCTGCAGGTaGGCCTGCTGGAGGTCCCAGGTGACCACTGACCGA +
Preference number: 6 (lower is better)
Translates to: VWQARGSLGGCR*ACWRSQVTTDR
Trigger: TCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGAGACTCCCACGTGCCTGCCAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000492515.1
ENST00000621319.2
ENST00000631419.1
ENST00000631522.1
ENST00000633856.1
CDS GCA 72 bp AAGCGGTACAGGCGCTCCGGGAAGCCGCGCACCAGCTaGTTCAGCACCATGCCGCTCAGGTCGGCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: KRYRRSGKPRTS*FSTMPLRSAVL
Trigger: GAGCACGGCCGACCTGAGCGGCATGGTGCTGAAGCAGCTGGTGCGCGGCTTCCCGGAGCGCCTGTACCGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS TCA 72 bp TCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCTGAGGCCCGACCT +
Preference number: 6 (lower is better)
Translates to: SGAAGAPAGGPR*PLTDSCSEARP
Trigger: AGGTCGGGCCTCAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS TCA 72 bp TCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCTGTGGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: SGAAGAPAGGPR*PLTDSCSVGDR
Trigger: CCTGTCCCCCACAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000486629.1
ENST00000633856.1
CDS CCA 72 bp AGCTGCTGGAGTCGGAGTCAGCGCCCCCTGAGCTGCTaGTGTTCAGACAGGGCAGGGAGCCCCACTCCACGG +
Preference number: 6 (lower is better)
Translates to: SCWSRSQRPLSC*CSDRAGSPTPR
Trigger: CCGTGGAGTGGGGCTCCCTGCCCTGTCTGAACACCAGCAGCTCAGGGGGCGCTGACTCCGACTCCAGCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS GCA 72 bp AGGAAGCGGAAGCCGAATCTGCTCTCCGCCGTGTTCTaGACCGACAGGGCCACCAGGGGGCAGCTACGGTCC +
Preference number: 6 (lower is better)
Translates to: RKRKPNLLSAVF*TDRATRGQLRS
Trigger: GGACCGTAGCTGCCCCCTGGTGGCCCTGTCGGTGCAGAACACGGCGGAGAGCAGATTCGGCTTCCGCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 72 bp GCAGTGTGCGAGGGTCCAGGGACTCAAGAGCCAACCTaGAGCGGCAGCAGACCTGCGGGTCGGCAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: AVCEGPGTQEPT*SGSRPAGRQSR
Trigger: TCTGCTCTGCCGACCCGCAGGTCTGCTGCCGCTGCAGGTTGGCTCTTGAGTCCCTGGACCCTCGCACACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CCA 72 bp CAGAAACCAGGAGTCCGGGCGAGGACAGGGCGGGGTTaGGTTGGGCTGGGGACTGTGCTGCAGACCTCTTGG +
Preference number: 6 (lower is better)
Translates to: QKPGVRARTGRG*VGLGTVLQTSW
Trigger: CCAAGAGGTCTGCAGCACAGTCCCCAGCCCAACCCAACCCCGCCCTGTCCTCGCCCGGACTCCTGGTTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CAA 90 bp AGCGCGGGCAAGGATGAGGGTAAGGATCTGCCTCAGCGGTTGGGGTaGGGGTCAGACAGAAACCAGGAGTCCGGGCGAGGACAGGGCGGG +
Preference number: 6 (lower is better)
Translates to: SAGKDEGKDLPQRLG*GSDRNQESGRGQGG
Trigger: CCCGCCCTGTCCTCGCCCGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS TCA 72 bp TGCCGCTCAGGTCGGCCGTGCTCTCCTGCGACGGGTTaGAGATGCGGACGAACTTCTCCCGGCAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: CRSGRPCSPATG*RCGRTSPGSSQ
Trigger: CTGTGAGCTGCCGGGAGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGACCTGAGCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS TCA 72 bp CTGCAGGTGCGCCTGCTGGAGGTCCCAGGTGACCACTaGCCGACTCTTGCTCTGAGGCCCGACCTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: LQVRLLEVPGDH*PTLALRPDLQA
Trigger: TGCTTGGAGGTCGGGCCTCAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS TCA 72 bp TCGGGGGCTGCAGGTGCGCCTGCTGGAGGTCCCAGGTaGCCACTGACCGACTCTTGCTCTGACCCCCAAACT +
Preference number: 6 (lower is better)
Translates to: SGAAGAPAGGPR*PLTDSCSDPQT
Trigger: AGTTTGGGGGTCAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAGCCCCCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CCA 72 bp ACGCTCTTCCGGCACACCCGAACTCGGTGTTCTTTCTaGAGCCGACAGTCCTCCAGGCCCAGCCCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: TLFRHTRTRCSF*SRQSSRPSPAS
Trigger: AGAGGCCGGGCTGGGCCTGGAGGACTGTCGGCTCCAGAAAGAACACCGAGTTCGGGTGTGCCGGAAGAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS GCA 72 bp TCTGTGCAGGGCTGGGGCGACAGGACCGGCTCGCCGTaGCTGGGTGAGTGGGTTTTCTGGAGATCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SVQGWGDRTGSP*LGEWVFWRSSE
Trigger: CTCAGAAGATCTCCAGAAAACCCACTCACCCAGGCACGGCGAGCCGGTCCTGTCGCCCCAGCCCTGCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329451.8
ENST00000621319.2
CDS GCA 72 bp TTCAGCACCATGCCGCTCAGGTCGGCCGTGCTCTCCTaGGACGGGTTGAAGATGCGGACGAACTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: FSTMPLRSAVLS*DGLKMRTNFSR
Trigger: CCGGGAGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGACCTGAGCGGCATGGTGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CCA 72 bp TCCAGGATGTGGCAGAGCCGGGCGTCCTCGCCATTCTaGATGGCCCACCGCAAGGCCTGGATCTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: SRMWQSRASSPF*MAHRKAWISSS
Trigger: AGAACTGGAGATCCAGGCCTTGCGGTGGGCCATCCAGAATGGCGAGGACGCCCGGCTCTGCCACATCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000492515.1
ENST00000621319.2
ENST00000631419.1
ENST00000631522.1
ENST00000633856.1
CDS CAA 72 bp ATGCCGCTCAGGTCGGCCGTGCTCTCCTGCGACGGGTaGAAGATGCGGACGAACTTCTCCCGGCAGCTCACA +
Preference number: 6 (lower is better)
Translates to: MPLRSAVLSCDG*KMRTNFSRQLT
Trigger: TGTGAGCTGCCGGGAGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGACCTGAGCGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS CAA 72 bp GCCTGCTGGAGGTCCCAGGTGACCACTGACCGACTCTaGCTCTGTGGGGGACAGGAGAGCCTCTTCCTCGGT +
Preference number: 6 (lower is better)
Translates to: ACWRSQVTTDRL*LCGGQESLFLG
Trigger: ACCGAGGAAGAGGCTCTCCTGTCCCCCACAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486629.1
ENST00000633856.1
CDS CAA 90 bp TTCAGCACCATGCCGCTCAGGTCGGCCGTGCTCTCCTGCGACGGGTaGAAGATGCGGACGAACTTCTCCCGGCAGCTCACAGCCACGATC +
Preference number: 6 (lower is better)
Translates to: FSTMPLRSAVLSCDG*KMRTNFSRQLTATI
Trigger: GATCGTGGCTGTGAGCTGCCGGGAGAAGTTCGTCCGCATCTTCAACCCGTCGCAGGAGAGCACGGCCGACCTGAGCGGCATGGTGCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000469990.1
ENST00000621319.2
ENST00000632043.1
CDS TCA 72 bp CTGCAGGTGCGCCTGCTGGAGGTCCCAGGTGACCACTaGCCGACTCTTGCTCTGACCCCCAAACTGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LQVRLLEVPGDH*PTLALTPKLKP
Trigger: AGGCTTCAGTTTGGGGGTCAGAGCAAGAGTCGGTCAGTGGTCACCTGGGACCTCCAGCAGGCGCACCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS GCA 72 bp GGGTTTTCTGGAGATCTTCTGAGTCCCTGCTGTAGCTaGCGGCCTGCACCAGCGCTTGCTCGGAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: GFSGDLLSPCCS*RPAPALARRKR
Trigger: GCGCTTCCTCCGAGCAAGCGCTGGTGCAGGCCGGCAGCTACAGCAGGGACTCAGAAGATCTCCAGAAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329451.8
CDS GCA 72 bp TCCAAGCAGGCCTGGGAGGGAAGGGCTGTATACCGTTaGCATGGATACCAGCACCCAGAAGGGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SKQAWEGRAVYR*HGYQHPEGVGL
Trigger: CAGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTCCCTCCCAGGCCTGCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS GCA 72 bp GGAGGGTCAGCGCGGGCAAGGATGAGGGTAAGGATCTaGCTCAGCGGTTGGGGTTGGGGTCAGACAGAAACC +
Preference number: 6 (lower is better)
Translates to: GGSARARMRVRI*LSGWGWGQTET
Trigger: GGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCGCGCTGACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CCA 72 bp CGGGCAAGGATGAGGGTAAGGATCTGCCTCAGCGGTTaGGGTTGGGGTCAGACAGAAACCAGGAGTCCGGGC +
Preference number: 6 (lower is better)
Translates to: RARMRVRICLSG*GWGQTETRSPG
Trigger: GCCCGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CAA 72 bp GGCCGGGGCTGCTTTTGCTTTGAGCTGGGCTCCATGTaGGTGAAGAGGTTGGGATACCGGCGGGCAACGCTG +
Preference number: 6 (lower is better)
Translates to: GRGCFCFELGSM*VKRLGYRRATL
Trigger: CAGCGTTGCCCGCCGGTATCCCAACCTCTTCACCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS CAA 72 bp CTCCAAGCAGGCCTGGGAGGGAAGGGCTGTATACCGTaGCCATGGATACCAGCACCCAGAAGGGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: LQAGLGGKGCIP*PWIPAPRRGGA
Trigger: AGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTCCCTCCCAGGCCTGCTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS CAA 72 bp GCGGGCAAGGATGAGGGTAAGGATCTGCCTCAGCGGTaGGGGTTGGGGTCAGACAGAAACCAGGAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: AGKDEGKDLPQR*GLGSDRNQESG
Trigger: CCCGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTTGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CAA 90 bp TGTGGCCAGGGCCGGGGCTGCTTTTGCTTTGAGCTGGGCTCCATGTaGGTGAAGAGGTTGGGATACCGGCGGGCAACGCTGTTCCAATCC +
Preference number: 6 (lower is better)
Translates to: CGQGRGCFCFELGSM*VKRLGYRRATLFQS
Trigger: GGATTGGAACAGCGTTGCCCGCCGGTATCCCAACCTCTTCACCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCCCGGCCCTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS CAA 90 bp AGGCCCGACCTCCAAGCAGGCCTGGGAGGGAAGGGCTGTATACCGTaGCCATGGATACCAGCACCCAGAAGGGGTGGGGCTGTTTGTTAC +
Preference number: 6 (lower is better)
Translates to: RPDLQAGLGGKGCIP*PWIPAPRRGGAVCY
Trigger: GTAACAAACAGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTCCCTCCCAGGCCTGCTTGGAGGTCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS TCA 72 bp ATCAGCTTCTGGACCTGGTTCTGCAGGAGTTTCTCCTaGCTGTGGGAGCTCCTCTTGGGCGGAAGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: ISFWTWFCRSFS*LWELLLGGSPA
Trigger: GGCGGGGCTTCCGCCCAAGAGGAGCTCCCACAGTCAGGAGAAACTCCTGCAGAACCAGGTCCAGAAGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000621319.2
ENST00000631419.1
ENST00000633856.1
CDS TCA 72 bp TTCAGACAGGGCAGGGAGCCCCACTCCACGGTCTTGTaGTGCCGCTCGGAATGCTTTCCAGAGGACTCTGGG +
Preference number: 6 (lower is better)
Translates to: FRQGREPHSTVL*CRSECFPEDSG
Trigger: CCCAGAGTCCTCTGGAAAGCATTCCGAGCGGCATCACAAGACCGTGGAGTGGGGCTCCCTGCCCTGTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS CCA 72 bp GCAGGCCTGGGAGGGAAGGGCTGTATACCGTTGCCATaGATACCAGCACCCAGAAGGGGTGGGGCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: AGLGGKGCIPLP*IPAPRRGGAVC
Trigger: ACAAACAGCCCCACCCCTTCTGGGTGCTGGTATCCATGGCAACGGTATACAGCCCTTCCCTCCCAGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441853.5
ENST00000631419.1
CDS CAA 90 bp CGGGGCTGCTTTTGCTTTGAGCTGGGCTCCATGTTGGTGAAGAGGTaGGGATACCGGCGGGCAACGCTGTTCCAATCCACGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RGCFCFELGSMLVKR*GYRRATLFQSTSSS
Trigger: GCTGGAGGACGTGGATTGGAACAGCGTTGCCCGCCGGTATCCCAACCTCTTCACCAACATGGAGCCCAGCTCAAAGCAAAAGCAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000621319.2
ENST00000631419.1
CDS CCA 72 bp CCCGGTGGGGGCCTGAATGTTTTCAGAGAGGTCGCTTaGGTCCATCAGAGTCTCTGCCGTCACTACCTCCAC +
Preference number: 6 (lower is better)
Translates to: PGGGLNVFREVA*VHQSLCRHYLH
Trigger: GTGGAGGTAGTGACGGCAGAGACTCTGATGGACCCAAGCGACCTCTCTGAAAACATTCAGGCCCCCACCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000621319.2
ENST00000631419.1
ENST00000633856.1
CDS CAA 72 bp AAGGATGAGGGTAAGGATCTGCCTCAGCGGTTGGGGTaGGGGTCAGACAGAAACCAGGAGTCCGGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: KDEGKDLPQRLG*GSDRNQESGRG
Trigger: TCCTCGCCCGGACTCCTGGTTTCTGTCTGACCCCAACCCCAACCGCTGAGGCAGATCCTTACCCTCATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS TCA 72 bp AGCCGTGTCCACACCCTCTGGGCTACCCCATTACCATaGCAAGTATTCCCTCTGCTCCAGGAGAAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: SRVHTLWATPLP*QVFPLLQEKSQ
Trigger: CTGGCTTTTCTCCTGGAGCAGAGGGAATACTTGTCATGGTAATGGGGTAGCCCAGAGGGTGTGGACACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492515.1
ENST00000631522.1
CDS CAA 72 bp TTTTGCTTTGAGCTGGGCTCCATGTTGGTGAAGAGGTaGGGATACCGGCGGGCAACGCTGTTCCAATCCACG +
Preference number: 6 (lower is better)
Translates to: FCFELGSMLVKR*GYRRATLFQST
Trigger: CGTGGATTGGAACAGCGTTGCCCGCCGGTATCCCAACCTCTTCACCAACATGGAGCCCAGCTCAAAGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329451.8
ENST00000441853.5
ENST00000486629.1
ENST00000621319.2
ENST00000631419.1
ENST00000633856.1