RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMNB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000176619

Ensembl transcript IDs: ENST00000325327.4, ENST00000490554.5, ENST00000527409.1, ENST00000532465.1, ENST00000534495.1

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAACGGTCCGAGAAACCCGGCCGGTGCGCTGCCAGAACGGGAATCTaGAAGCCCAGGCAGCGGAGTGAAAACCCGCCCTGGGGGCCACGC +
Preference number: 1 (lower is better)
Translates to: QRSEKPGRCAARTGI*KPRQRSENPPWGPR
Trigger: GCGTGGCCCCCAGGGCGGGTTTTCACTCCGCTGCCTGGGCTTCCAGATTCCCGTTCTGGCAGCGCACCGGCCGGGTTTCTCGGACCGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 90 bp TTCAGACCAACCCCAGCCAAAGCCGCTGGCATGAGGACAGGTGCATaGTCGGATTCTGGGTCAGCCCGCAGGCCTCCCGGCTCCTGGGCT +
Preference number: 1 (lower is better)
Translates to: FRPTPAKAAGMRTGA*SDSGSARRPPGSWA
Trigger: AGCCCAGGAGCCGGGAGGCCTGCGGGCTGACCCAGAATCCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGGGTTGGTCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 90 bp TGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGCATaGGGACAGGTGCATGATCGGATTCTGGGTCAGCCCGCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: CRVQASDQPQPKPLA*GQVHDRILGQPAGL
Trigger: GAGGCCTGCGGGCTGACCCAGAATCCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 90 bp AGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGCATGAGGACAGGTaGATGATCGGATTCTGGGTCAGCCCGCAGGCCTCCCGGCTCCTG +
Preference number: 1 (lower is better)
Translates to: RLQTNPSQSRWHEDR*MIGFWVSPQASRLL
Trigger: CAGGAGCCGGGAGGCCTGCGGGCTGACCCAGAATCCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 90 bp GGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCCAGCGGCTaGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGC +
Preference number: 1 (lower is better)
Translates to: GKRTQSVASIPTSSG*QRVSPGQAKLPTSR
Trigger: GCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGGAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 90 bp GAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCTGACTaGGAGCACAGCGGCGTAGCCTCCAGGAGGAAATGCTTTGGTAAG +
Preference number: 1 (lower is better)
Translates to: EGIPGAGKAPYQPPD*EHSGVASRRKCFGK
Trigger: CTTACCAAAGCATTTCCTCCTGGAGGCTACGCCGCTGTGCTCCCAGTCAGGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 90 bp CACGGGAGGGGCTCCACAGCGCTCTCCTCCAGAGGGTCAACATGGTaGCGTTCCCTGCAGACAGCTGTTCTGAAACTCACAGCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: HGRGSTALSSRGSTW*RSLQTAVLKLTASA
Trigger: GGCAGAAGCTGTGAGTTTCAGAACAGCTGTCTGCAGGGAACGCCACCATGTTGACCCTCTGGAGGAGAGCGCTGTGGAGCCCCTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 90 bp GGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTaGGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCC +
Preference number: 1 (lower is better)
Translates to: GDGACPWLSFGVFKT*AALSEGGSAVGGCP
Trigger: GGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 90 bp ACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTaGTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCC +
Preference number: 1 (lower is better)
Translates to: TLASTKPSQSGPGDS*YEGGKEDTVCRQHS
Trigger: GGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 90 bp CGACGCCCCAGGACTGAGGAGTCCCTCAGATCTTTAACAAAGAACTaGCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGCA +
Preference number: 1 (lower is better)
Translates to: RRPRTEESLRSLTKN*RVQASDQPQPKPLA
Trigger: TGCCAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCCTCAGTCCTGGGGCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 90 bp GAACACGGGAGGGGCTCCACAGCGCTCTCCTCCAGAGGGTCAACATaGTGGCGTTCCCTGCAGACAGCTGTTCTGAAACTCACAGCTTCT +
Preference number: 1 (lower is better)
Translates to: EHGRGSTALSSRGST*WRSLQTAVLKLTAS
Trigger: AGAAGCTGTGAGTTTCAGAACAGCTGTCTGCAGGGAACGCCACCATGTTGACCCTCTGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 90 bp ATGGTGGCGTTCCCTGCAGACAGCTGTTCTGAAACTCACAGCTTCTaGCTCCAAGGCAACCAGATGTGTCCCCTCCACATCTCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: MVAFPADSCSETHSF*LQGNQMCPLHISPP
Trigger: GGGAGGGGAGATGTGGAGGGGACACATCTGGTTGCCTTGGAGGCAGAAGCTGTGAGTTTCAGAACAGCTGTCTGCAGGGAACGCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 90 bp CAAGCATCTTCTAAACCTCCGGGTCCTGGCCCTGGGCTTCCAATTTaGCCAAATGGTGAGATGAGGAGTGGGGTGGGATTGAAAAGTCTC +
Preference number: 1 (lower is better)
Translates to: QASSKPPGPGPGLPI*PNGEMRSGVGLKSL
Trigger: GAGACTTTTCAATCCCACCCCACTCCTCATCTCACCATTTGGTCAAATTGGAAGCCCAGGGCCAGGACCCGGAGGTTTAGAAGATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 90 bp TGCAAGGCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTaGTCCTCCAGAGCCAAAATACATAGGATGTGGCTGAGACCACTG +
Preference number: 1 (lower is better)
Translates to: CKAVGKSQTNSRIQL*SSRAKIHRMWLRPL
Trigger: CAGTGGTCTCAGCCACATCCTATGTATTTTGGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGCCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 90 bp TCCAGGATACAGCTTTGCTCCTCCAGAGCCAAAATACATAGGATGTaGCTGAGACCACTGCAGACTCCCCATAGGACAAGATCACCAAGA +
Preference number: 1 (lower is better)
Translates to: SRIQLCSSRAKIHRM*LRPLQTPHRTRSPR
Trigger: TCTTGGTGATCTTGTCCTATGGGGAGTCTGCAGTGGTCTCAGCCACATCCTATGTATTTTGGCTCTGGAGGAGCAAAGCTGTATCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 90 bp GAGAAACATGGTTTCAGCGAGAAAATCACAGATAAAAGCACAGTATaGATAGACGCATGTGTATATATAGGCACAGGGCAGACGGAGCTG +
Preference number: 1 (lower is better)
Translates to: EKHGFSEKITDKSTV*IDACVYIGTGQTEL
Trigger: CAGCTCCGTCTGCCCTGTGCCTATATATACACATGCGTCTATCCATACTGTGCTTTTATCTGTGATTTTCTCGCTGAAACCATGTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCCCCAGGGAGGCGGGATaGAGTCACAGGGGAGCGGTG +
Preference number: 2 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAAPREAG*SHRGAV
Trigger: CACCGCTCCCCTGTGACTGCATCCCGCCTCCCTGGG...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCGGGGGTGCCAGGCATTaGGAAGCTGGACTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAAGGARH*EAGLRG
Trigger: GCCCCTCAGTCCAGCTTCCCAATGCCTGGCACCCCC...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGCCCCCGCCCTGCAGTaGACGCCATGGCCCGGAGAC +
Preference number: 2 (lower is better)
Translates to: PEPSLARSPASRVRVIPAAPALQ*TPWPGD
Trigger: GTCTCCGGGCCATGGCGTTCACTGCAGGGCGGGGGC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCACCCGGCCGGTGCGCTaGCAGAACGGGAATCTGGAA +
Preference number: 2 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAATRPVR*QNGNLE
Trigger: TTCCAGATTCCCGTTCTGGCAGCGCACCGGCCGGGT...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTTCTGCCGTCGGAGGGTaGCCCAGCCCCACGCCACCC +
Preference number: 2 (lower is better)
Translates to: PEPSLARSPASRVRVIPASAVGG*PSPTPP
Trigger: GGGTGGCGTGGGGCTGGGGCACCCTCCGACGGCAGA...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGTGCCGCCCCCGCCCTaGAGTGAACGCCATGGCCCG +
Preference number: 2 (lower is better)
Translates to: PEPSLARSPASRVRVIPAVPPPP*SERHGP
Trigger: CGGGCCATGGCGTTCACTGCAGGGCGGGGGCGGCAC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTTCCCTACCAGCCGCCTaGCTGGGAGCACAGCGGCGT +
Preference number: 2 (lower is better)
Translates to: PEPSLARSPASRVRVIPASLPAA*LGAQRR
Trigger: ACGCCGCTGTGCTCCCAGTCAGGCGGCTGGTAGGGA...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCACTGAGGGGCTTGGGTaGGTCGTGATAGGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAATEGLG*VVIGVR
Trigger: CCTGACTCCTATCACGACGCACCCAAGCCCCTCAGT...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCCACCACCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGGGAGTGGGGTGGGATTaGAAAGTCTCCGGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: PTTTEFLRSFRAPSAAGPGVGWD*KVSGAA
Trigger: CGCTGCCCCGGAGACTTTTCAATCCCACCCCACTCC...CGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGGTGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACGCTGCGTGGCTGCCTaGGGAGTTCCCGCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKRCVAA*GVPAVR
Trigger: TCGGACAGCGGGAACTCCTCAGGCAGCCACGCAGCG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGATTGGGAAGCTGGACTaGGGGGCTTGGGTGCGTCGT +
Preference number: 2 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGIGKLD*GAWVRR
Trigger: ACGACGCACCCAAGCCCCTCAGTCCAGCTTCCCAAT...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGTGCACAGTCAGGAACTaGACTGCGGGAAAACTCCCC +
Preference number: 2 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPCTVRN*TAGKLP
Trigger: GGGGAGTTTTCCCGCAGTTCAGTTCCTGACTGTGCA...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGTCCGGGTCCTGGCCCTaGGCTTCCAATTTGACCAAA +
Preference number: 2 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGSGSWP*ASNLTK
Trigger: TTTGGTCAAATTGGAAGCCCAGGGCCAGGACCCGGA...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCGCCCAGGCAGCGGAGTaGAAACCCGCCCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTAQAAE*KPALGA
Trigger: GGCCCCCAGGGCGGGTTTTCACTCCGCTGCCTGGGC...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGACGCCATCCCCATGCTaGCCCACACCCGCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLTPSPC*PTPAAW
Trigger: CCACGCAGCGGGTGTGGGCCAGCATGGGGATGGCGT...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAGCCAGAACGGGAATCTaGAAGCCCAGGCAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKARTGI*KPRQRS
Trigger: ACTCCGCTGCCTGGGCTTCCAGATTCCCGTTCTGGC...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGAAAACCCACCACCACTaGATTCCTACGCAGTTTCCG +
Preference number: 2 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGKTHHH*IPTQFP
Trigger: CGGAAACTGCGTAGGAATTCAGTGGTGGTGGGTTTT...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCGCTGGGCAGCCAGAATaGAGGCTTGGCCCCGGGCCC +
Preference number: 2 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTAGQPE*RLGPGP
Trigger: GGGCCCGGGGCCAAGCCTGCATTCTGGCTGCCCAGC...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCGCCAGGAGGGAGGGCTaGGGGAGACCCACCCACACG +
Preference number: 2 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTARREG*GRPTHT
Trigger: CGTGTGGGTGGGTCTCCCCCAGCCCTCCCTCCTGGC...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGTACCAGCCGCCTGACTaGGAGCACAGCGGCGTAGCC +
Preference number: 2 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLYQPPD*EHSGVA
Trigger: GGCTACGCCGCTGTGCTCCCAGTCAGGCGGCTGGTA...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCCCCACTTCCAGCGGCTaGCAGAGGGTATCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAPTSSG*QRVSPG
Trigger: CCCCGGGGATACCCTCTGCCAGCCGCTGGAAGTGGG...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTCTCAAGGCCCTGGCGTaGGCTCCTGACCTGTGTACT +
Preference number: 2 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTLKALA*APDLCT
Trigger: AGTACACAGGTCAGGAGCTCACGCCAGGGCCTTGAG...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCGAAGTGGCAGCGAAGTaGGGCTGGAGGAGACCCGCC +
Preference number: 2 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFEVAAK*GWRRPA
Trigger: GGCGGGTCTCCTCCAGCCTCACTTCGCTGCCACTTC...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGCCTGGGCTTCCAATTTaGCCAAATGGTGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLPGLPI*PNGEMR
Trigger: CCTCATCTCACCATTTGGTCAAATTGGAAGCCCAGG...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCGGGGGACTTTGTCCCTaGGCCCAGCCTGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTGGLCP*AQPARL
Trigger: CAGCCTTGCAGGCTGGGCTCAGGGACAAAGTCCCCC...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCGGGGCAGCGGCGAAGTaGCAGCGAAGTGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFGAAAK*QRSEAG
Trigger: TCCAGCCTCACTTCGCTGCCACTTCGCCGCTGCCCC...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCCAGGGCAGACGGAGCTaGAACACGGGAGGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFQGRRS*NTGGAP
Trigger: TGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTG...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAATTTTCAGGACAGGACTaGGCAGCGTCTGGACATGAG +
Preference number: 2 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKFSGQD*AASGHE
Trigger: CTCATGTCCAGACGCTGCCCAGTCCTGTCCTGAAAA...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGGGGTTCTGTGGGCCTaGGGCGTGCTGTTTTCAGGA +
Preference number: 2 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLGVLWA*GVLFSG
Trigger: TCCTGAAAACAGCACGCCCCAGGCCCACAGAACCCC...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGTCGACGCCTGGATTCTaGATTTGGTTTTGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPSTPGF*IWFCRK
Trigger: CTTTCTACAAAACCAAATTCAGAATCCAGGCGTCGA...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTAGAGGGTCAACATGGTaGCGTTCCCTGCAGACAGCT +
Preference number: 2 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTRGSTW*RSLQTA
Trigger: AGCTGTCTGCAGGGAACGCCACCATGTTGACCCTCT...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGAAAATACATAGGATGTaGCTGAGACCACTGCAGACT +
Preference number: 2 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGKIHRM*LRPLQT
Trigger: AGTCTGCAGTGGTCTCAGCCACATCCTATGTATTTT...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGAAGGCAAATGTAGGGTaGGGGGTTCTGTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLKANVG*GVLWAW
Trigger: CCAGGCCCACAGAACCCCCCACCCTACATTTGCCTT...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CAA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTaGGTGTCTTTAAGACTTGAGCTGCACTTTCTGAAGGAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SERHGPETARAHGSV*VSLRLELHFLKEAL
Trigger: CAGAGCCTCCTTCAGAAAGTGCAGCTCAAGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAAAGCCGCTGGCATaGGGACAGGTGCATGATCGG +
Preference number: 2 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTPKPLA*GQVHDR
Trigger: CCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGG...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCGAGAAACCCGGCCGGTaGGCTGCCAGAACGGGAATC +
Preference number: 2 (lower is better)
Translates to: DSILNEPPITHRLPSPRFEKPGR*AARTGI
Trigger: GATTCCCGTTCTGGCAGCGCACCGGCCGGGTTTCTC...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGCCCGGAGACGGCGCGTaGCCATGGCTCAGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGPGDGA*PWLSFG
Trigger: ACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGG...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATAGTTTTCAGTGGCTCTaGGTAAAGAAAGGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: PECRLGPGPHQVDAWILNSFQWL*VKKGVW
Trigger: CCACACACCTTTCTTTACCCAGAGCCACTGAAAACT...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGTCCAGAGGGTCAACATaGTGGCGTTCCCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLSRGST*WRSLQT
Trigger: TGTCTGCAGGGAACGCCACCATGTTGACCCTCTGGA...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGTGGCCTTGGCCTGTCTaGGAAACATGGTTTCAGCGA +
Preference number: 2 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLWPWPV*ETWFQR
Trigger: TCGCTGAAACCATGTTTCTCAGACAGGCCAAGGCCA...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGCCTCCCCTGCCCTGTTaGCCTTGCACAGTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGPPLPC*PCTVRN
Trigger: GTTCCTGACTGTGCAAGGCCAACAGGGCAGGGGAGG...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCCAGGCATTGGGAAGCTaGACTGAGGGGCTTGGGTGC +
Preference number: 2 (lower is better)
Translates to: DSILNEPPITHRLPSPRFQALGS*TEGLGC
Trigger: GCACCCAAGCCCCTCAGTCCAGCTTCCCAATGCCTG...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCCCCTGCTTATTGTTGTaGCAGGTCTTACGACGGGAC +
Preference number: 2 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAPCLLL*QVLRRD
Trigger: GTCCCGTCGTAAGACCTGTCACAACAATAAGCAGGG...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCCGCTGTCCGAAGCTaGGCAGCCAGAATGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCPAVRS*AARMQA
Trigger: AGCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGG...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR TCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCTTGAGCTGCACTTTCTaGAGGAGGCTCTGCCGTCGG +
Preference number: 2 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCLSCTF*RRLCRR
Trigger: CCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAA...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR GCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCTCCAGGATACAGCTTTaGTCCTCCAGAGCCAAAATA +
Preference number: 2 (lower is better)
Translates to: DSILNEPPITHRLPSPRFSRIQL*SSRAKI
Trigger: TATTTTGGCTCTGGAGGAGCAAAGCTGTATCCTGGA...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCGACGGCGCGTGCCCATaGCTCAGTTTTGGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCDGACP*LSFGVF
Trigger: AAAGACACCAAAACTGAGCCATGGGCACGCGCCGTC...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCACCAGGTCGACGCCTaGATTCTGAATTTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: LSVSKDSILNEPPITHRLHQVDA*ILNLVL
Trigger: CAAAACCAAATTCAGAATCCAGGCGTCGACCTGGTG...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCGATAAAAGCACAGTATaGATAGACGCATGTGTATAT +
Preference number: 2 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCDKSTV*IDACVY
Trigger: ATATACACATGCGTCTATCCATACTGTGCTTTTATC...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp GGATGCAGTCACAGGGGAGCGGTGCCGCCCCCGCCCTaGAGTGAACGCCATGGCCCGGAGACGGCGCGTGCC +
Preference number: 3 (lower is better)
Translates to: GCSHRGAVPPPP*SERHGPETARA
Trigger: GGCACGCGCCGTCTCCGGGCCATGGCGTTCACTGCAGGGCGGGGGCGGCACCGCTCCCCTGTGACTGCATCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp CAGCGAGCAGGGGCTACGTGGAGCAGCGGGTGTTTCTaGTTTGTCGGCCGCTGGCTCCTTCCCGGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: QRAGATWSSGCF*FVGRWLLPGLG
Trigger: CCCCAGGCCGGGAAGGAGCCAGCGGCCGACAAAGCAGAAACACCCGCTGCTCCACGTAGCCCCTGCTCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp CCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCTTaGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCT +
Preference number: 3 (lower is better)
Translates to: PAVRSWAARMQA*PRAPPGRRLDS
Trigger: AGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp ATCCCCATGCTGGCCCACACCCGCTGCGTGGCTGCCTaGGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: IPMLAHTRCVAA*GVPAVRSWAAR
Trigger: TCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACGCAGCGGGTGTGGGCCAGCATGGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp CCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCTGACTaGGAGCACAGCGGCGTAGCCTCCAGGAGGAAATGC +
Preference number: 3 (lower is better)
Translates to: PGAGKAPYQPPD*EHSGVASRRKC
Trigger: GCATTTCCTCCTGGAGGCTACGCCGCTGTGCTCCCAGTCAGGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp TGCCAGAACGGGAATCTGGAAGCCCAGGCAGCGGAGTaGAAACCCGCCCTGGGGGCCACGCCATCCCCATGC +
Preference number: 3 (lower is better)
Translates to: CQNGNLEAQAAE*KPALGATPSPC
Trigger: GCATGGGGATGGCGTGGCCCCCAGGGCGGGTTTTCACTCCGCTGCCTGGGCTTCCAGATTCCCGTTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp ACCCCAGCCAAAGCCGCTGGCATGAGGACAGGTGCATaGTCGGATTCTGGGTCAGCCCGCAGGCCTCCCGGC +
Preference number: 3 (lower is better)
Translates to: TPAKAAGMRTGA*SDSGSARRPPG
Trigger: GCCGGGAGGCCTGCGGGCTGACCCAGAATCCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp GAGAAACCCGGCCGGTGCGCTGCCAGAACGGGAATCTaGAAGCCCAGGCAGCGGAGTGAAAACCCGCCCTGG +
Preference number: 3 (lower is better)
Translates to: EKPGRCAARTGI*KPRQRSENPPW
Trigger: CCAGGGCGGGTTTTCACTCCGCTGCCTGGGCTTCCAGATTCCCGTTCTGGCAGCGCACCGGCCGGGTTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp ACCAACCCCAGCCAAAGCCGCTGGCATGAGGACAGGTaGATGATCGGATTCTGGGTCAGCCCGCAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: TNPSQSRWHEDR*MIGFWVSPQAS
Trigger: GGAGGCCTGCGGGCTGACCCAGAATCCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGGGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp GCCCCAGCTGCAGCCCAGCTCCGTTTTTGCAGGTTGTaGTGTGACGCTCGCTGGACGCAGGGCTTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: APAAAQLRFCRL*CDARWTQGLEE
Trigger: CTCTTCCAAGCCCTGCGTCCAGCGAGCGTCACAGCACAACCTGCAAAAACGGAGCTGGGCTGCAGCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp ACACAGTCTGTCGCCAGCATTCCCACTTCCAGCGGCTaGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCT +
Preference number: 3 (lower is better)
Translates to: TQSVASIPTSSG*QRVSPGQAKLP
Trigger: AGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGGAAGTGGGAATGCTGGCGACAGACTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp AGCTGCAGCCCAGCTCCGTTTTTGCAGGTTGTGCTGTaGCGCTCGCTGGACGCAGGGCTTGGAAGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: SCSPAPFLQVVL*RSLDAGLGRGC
Trigger: GCAGCCTCTTCCAAGCCCTGCGTCCAGCGAGCGTCACAGCACAACCTGCAAAAACGGAGCTGGGCTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp ATAAAGTCAACGGTCCGAGAAACCCGGCCGGTGCGCTaGCAGAACGGGAATCTGGAAGCCCAGGCAGCGGAG +
Preference number: 3 (lower is better)
Translates to: IKSTVRETRPVR*QNGNLEAQAAE
Trigger: CTCCGCTGCCTGGGCTTCCAGATTCCCGTTCTGGCAGCGCACCGGCCGGGTTTCTCGGACCGTTGACTTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CAA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCACCCCAGAACCCGCGTaGGTCCAGCAGGCGTGGGCC +
Preference number: 3 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTTPEPA*VQQAWA
Trigger: GGCCCACGCCTGCTGGACCAACGCGGGTTCTGGGGT...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp CAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGCATaGGGACAGGTGCATGATCGGATTCTGGGTCAGCCC +
Preference number: 3 (lower is better)
Translates to: QASDQPQPKPLA*GQVHDRILGQP
Trigger: GGGCTGACCCAGAATCCGATCATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp GCTTGGAAGAGGCTGCAGGCGGCGACGCCCCAGGACTaGGGAGTCCCTCAGATCTTTAACAAAGAACTGCCG +
Preference number: 3 (lower is better)
Translates to: AWKRLQAATPQD*GVPQIFNKELP
Trigger: CGGCAGTTCTTTGTTAAAGATCTGAGGGACTCCTCAGTCCTGGGGCGTCGCCGCCTGCAGCCTCTTCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp AGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTaGTATGAAGGTGGGAAAGAGGACACAGTCTGTCGC +
Preference number: 3 (lower is better)
Translates to: STKPSQSGPGDS*YEGGKEDTVCR
Trigger: GCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp AGGGGCTCCACAGCGCTCTCCTCCAGAGGGTCAACATaGTGGCGTTCCCTGCAGACAGCTGTTCTGAAACTC +
Preference number: 3 (lower is better)
Translates to: RGSTALSSRGST*WRSLQTAVLKL
Trigger: GAGTTTCAGAACAGCTGTCTGCAGGGAACGCCACCATGTTGACCCTCTGGAGGAGAGCGCTGTGGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CAA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCGCGGGTGTTTCTGCTTaGTCGGCCGCTGGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFAGVSA*SAAGSF
Trigger: GAAGGAGCCAGCGGCCGACAAAGCAGAAACACCCGC...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp GCTTCGAGTCACACGGCACGGGCTTACACAGAGGGATaGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGC +
Preference number: 3 (lower is better)
Translates to: ASSHTARAYTEG*FRIVLSGTQLS
Trigger: GCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGTGTAAGCCCGTGCCGTGTGACTCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR-3UTR CAA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCTGCCCTGTTGGCCTaGCACAGTCAGGAACTGAAC +
Preference number: 3 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTPALLA*HSQELN
Trigger: GTTCAGTTCCTGACTGTGCAAGGCCAACAGGGCAGG...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp GGTCAACATGGTGGCGTTCCCTGCAGACAGCTGTTCTaGAACTCACAGCTTCTGCCTCCAAGGCAACCAGAT +
Preference number: 3 (lower is better)
Translates to: GQHGGVPCRQLF*NSQLLPPRQPD
Trigger: ATCTGGTTGCCTTGGAGGCAGAAGCTGTGAGTTTCAGAACAGCTGTCTGCAGGGAACGCCACCATGTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR TCA 72 bp GCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTaGGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGA +
Preference number: 3 (lower is better)
Translates to: ACPWLSFGVFKT*AALSEGGSAVG
Trigger: TCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAGTCTTAAAGACACCAAAACTGAGCCATGGGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CCA 72 bp CAGCTTTGCTCCTCCAGAGCCAAAATACATAGGATGTaGCTGAGACCACTGCAGACTCCCCATAGGACAAGA +
Preference number: 3 (lower is better)
Translates to: QLCSSRAKIHRM*LRPLQTPHRTR
Trigger: TCTTGTCCTATGGGGAGTCTGCAGTGGTCTCAGCCACATCCTATGTATTTTGGCTCTGGAGGAGCAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR GCA 72 bp GTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTaGTCCTCCAGAGCCAAAATACATAGGATGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VGKSQTNSRIQL*SSRAKIHRMWL
Trigger: CAGCCACATCCTATGTATTTTGGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCGAGGCCGAGGCCTGCTaGGCCAGGTGGAAGCCACCG +
Preference number: 4 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAAEAEAC*ARWKPP
Trigger: CGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTC...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCACAGGGCAGACGGAGCTGGAACACGGGAGGGGCTCCACAGCGCTCTCCTCCAGCCCAGGCAGCGGAGTaGAAACCCGCCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AQGRRSWNTGGAPQRSPPAQAAE*KPALGA
Trigger: GGCCCCCAGGGCGGGTTTTCACTCCGCTGCCTGGGC...TGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGGGGCTGGGTGGCGTCTaGTGCTTCGCAGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGGLGGV*CFAGRA
Trigger: CGCCCTCCCTGCGAAGCATCAGACGCCACCCAGCCC...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGCCCGAGGCCGAGGCCTaGTGGGCCAGGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGPEAEA*WARWKP
Trigger: TGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTCGGG...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCACAGGGCAGACGGAGCTGGAACACGGGAGGGGCTCCACAGCGCTCTCCTCCACGTGCCCAGGACGCTTaGGCCGCTGCCCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQGRRSWNTGGAPQRSPPRAQDA*AAAQGL
Trigger: GAGCCCTTGGGCAGCGGCCCAAGCGTCCTGGGCACG...TGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGGCCAGGAGGGAGGGCTaGGGGAGACCCACCCACACG +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGARREG*GRPTHT
Trigger: CGTGTGGGTGGGTCTCCCCCAGCCCTCCCTCCTGGC...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGAGGCCTCCCGGCTCCTaGGCTCAGCGGGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGRPPGS*AQRGRL
Trigger: AAGCCTGCCCCGCTGAGCCCAGGAGCCGGGAGGCCT...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGGTCGCTGAGGGCAGCTaGCAGCTCCACCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGVAEGS*QLHLAP
Trigger: CGGAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGAC...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGGCCGCTTCCGCTTACTaGGGCCCAGGCGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLAASAY*GPGARW
Trigger: CCACCGGGCGCCTGGGCCGCAGTAAGCGGAAGCGGC...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CAA 72 bp TCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCTaGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: SRCPKLGSQNAG*APGPTRSTPGF
Trigger: GAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CAA 72 bp GAGCAGGGGCTACGTGGAGCAGCGGGTGTTTCTGCTTaGTCGGCCGCTGGCTCCTTCCCGGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQGLRGAAGVSA*SAAGSFPAWGW
Trigger: CCAGCCCCAGGCCGGGAAGGAGCCAGCGGCCGACAAAGCAGAAACACCCGCTGCTCCACGTAGCCCCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCACAGGGCAGACGGAGCTGGAACACGGGAGGGGCTCCACAGCGCTCTCCTCCACGATCTCCTCGATGCTaGCGCTACCCGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AQGRRSWNTGGAPQRSPPRSPRC*RYPRPR
Trigger: CCTCGGCCTCGGGTAGCGTCAGCATCGAGGAGATCG...TGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCGCGACGCCCCAGGACTaGGGAGTCCCTCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAAATPQD*GVPQIF
Trigger: AAAGATCTGAGGGACTCCTCAGTCCTGGGGCGTCGC...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAATGCCACCCGTGCCCGTaGCCAGGACGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKCHPCP*PGRLGR
Trigger: GCGGCCCAAGCGTCCTGGGCACGGGCACGGGTGGCA...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTCACCGCTGCCACCCGTaGCCGTGCCCAGGACGCTTG +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAHRCHP*PCPGRL
Trigger: CAAGCGTCCTGGGCACGGGCACGGGTGGCAGCGGTG...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATGGTGGAAGCCACCGCTaGCACCCGTGCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNGGSHR*HPCPCP
Trigger: TGGGCACGGGCACGGGTGGCAGCGGTGGCTTCCACC...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTCTGCCGTCGGAGGGTaGCCCAGCCCCACGCCACCC +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSSAVGG*PSPTPP
Trigger: GGGTGGCGTGGGGCTGGGGCACCCTCCGACGGCAGA...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAGTGCCGCCCCCGCCCTaGAGTGAACGCCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKVPPPP*SERHGP
Trigger: CGGGCCATGGCGTTCACTGCAGGGCGGGGGCGGCAC...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGGGGCTTGGAAGAGGCTaGAGGCGGCGACGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLGLGRG*RRRRPR
Trigger: CCTGGGGCGTCGCCGCCTGCAGCCTCTTCCAAGCCC...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGACGCGCGAGGATaGGCTGGGGGACAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPGDARG*AGGQLQ
Trigger: CTGAAGCTGTCCCCCAGCCCATCCTCGCGCGTCACC...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCCACCACCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGACGCCATCCCCATGCTaGCCCACACCCGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PTTTEFLRSFRAPSAAGPTPSPC*PTPAAW
Trigger: CCACGCAGCGGGTGTGGGCCAGCATGGGGATGGCGT...CGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGGTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CGTGGCTGCCTGAGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCCCCCAGAACCCGCGTTaGTCCAGCAGGCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGCLRSSRCPKLGSQNAGPQNPR*SSRRGP
Trigger: AGGCCCACGCCTGCTGGACCAACGCGGGTTCTGGGG...GCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CGTGGCTGCCTGAGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCCGGAGAGCTGGTAGCTaGGGGACTCCAGGCGCATGC +
Preference number: 4 (lower is better)
Translates to: RGCLRSSRCPKLGSQNAGRRAGS*GTPGAC
Trigger: GCATGCGCCTGGAGTCCCTCAGCTACCAGCTCTCCG...GCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATGCTCGAGGTGGCTCGTaGGACGGTGACGCGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNARGGS*DGDARG
Trigger: TCCTCGCGCGTCACCGTCTCACGAGCCACCTCGAGC...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CGTGGCTGCCTGAGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCGAAGTGGCAGCGAAGTaGGGCTGGAGGAGACCCGCC +
Preference number: 4 (lower is better)
Translates to: RGCLRSSRCPKLGSQNAGEVAAK*GWRRPA
Trigger: GGCGGGTCTCCTCCAGCCTCACTTCGCTGCCACTTC...GCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATCGCTGCGTGGCTGCCTaGGGAGTTCCCGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNRCVAA*GVPAVR
Trigger: TCGGACAGCGGGAACTCCTCAGGCAGCCACGCAGCG...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CTTGAGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCCAGCCCCAGGACGCTTGGGCCGCTaGCCAAGGGCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LELHFLKEALPSEGAPAPGRLGR*PRAPPP
Trigger: AGGTGGAGGAGCCCTTGGGCAGCGGCCCAAGCGTCC...TGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGGGAAGCTCTCGCCCGTaGCCCAGCTGCTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLGSSRP*PSCSGP
Trigger: AGGGCCAGAGCAGCTGGGGCACGGGCGAGAGCTTCC...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAGCTGGGCAGCCAGAATaGAGGCTTGGCCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKAGQPE*RLGPGP
Trigger: GGGCCCGGGGCCAAGCCTGCATTCTGGCTGCCCAGC...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTCCCAGGGAGGCGGGATaGAGTCACAGGGGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAPREAG*SHRGAV
Trigger: CACCGCTCCCCTGTGACTGCATCCCGCCTCCCTGGG...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGCGGCTGGCAGAGGGTATCCCCGGGGCAGGCAAAGCTCCCTACCAGCCGCCTGTGGGCCTGGGGCGTaGTGTTTTCAGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: PAAGRGYPRGRQSSLPAACGPGA*CFQDRT
Trigger: AGTCCTGTCCTGAAAACAGCACGCCCCAGGCCCACA...GGCGGCTGGTAGGGAGCTTTGCCTGCCCCGGGGATACCCTCTGCCAGCCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGCACACCGTGACCATCTaGCCGGCGCGCAGGATGTAC +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGHTVTI*PARRMY
Trigger: GTACATCCTGCGCGCCGGCCAGATGGTCACGGTGTG...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CGTGGCTGCCTGAGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCGTGCCCCAGCTGCTCTaGCCCTTCCACACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RGCLRSSRCPKLGSQNAGVPQLL*PFHTSV
Trigger: GACGCTGGTGTGGAAGGGCCAGAGCAGCTGGGGCAC...GCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTGCCCCCGCCCTGCAGTaGACGCCATGGCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTAPALQ*TPWPGD
Trigger: GTCTCCGGGCCATGGCGTTCACTGCAGGGCGGGGGC...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTCCCTACCAGCCGCCTaGCTGGGAGCACAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSSLPAA*LGAQRR
Trigger: ACGCCGCTGTGCTCCCAGTCAGGCGGCTGGTAGGGA...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CGTGGCTGCCTGAGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCTTGCAGGTTGTGCTGTaGCGCTCGCTGGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGCLRSSRCPKLGSQNAGLQVVL*RSLDAG
Trigger: CCCTGCGTCCAGCGAGCGTCACAGCACAACCTGCAA...GCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CTTGAGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCCAGCCCCATCAGCGGCACTGGCCTaGTTCTGGAGGCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LELHFLKEALPSEGAPAPSAALA*FWRPES
Trigger: GCTCTCCGGCCTCCAGAAGCAGGCCAGTGCCGCTGA...TGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGCGGACAAGCTGCCGCTaGTGCTCGAGGTGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLRTSCR*CSRWLV
Trigger: CACGAGCCACCTCGAGCAGCAGCGGCAGCTTGTCCG...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTCGGTGGCGGACAAGCTaGCGCTGCTGCTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSRWRTS*RCCSRW
Trigger: CCACCTCGAGCAGCAGCGGCAGCTTGTCCGCCACCG...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CTTGAGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCCAGCCCCACACCCCCGCACCAGCTaGCCACACCGTGACCATCTG +
Preference number: 4 (lower is better)
Translates to: LELHFLKEALPSEGAPAPHPRTS*PHRDHL
Trigger: CAGATGGTCACGGTGTGGGCAGCTGGTGCGGGGGTG...TGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACGCCCGTGCCCCAGCTaGTCTGGCCCTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKRPCPS*SGPSTP
Trigger: TGGTGTGGAAGGGCCAGAGCAGCTGGGGCACGGGCG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTCCTCGCGAGCCGCACTaGCCGCCTTGTCGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAPREPH*PPCRSG
Trigger: ACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGG...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGGGGCAGCGGCGAAGTaGCAGCGAAGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAGAAAK*QRSEAG
Trigger: TCCAGCCTCACTTCGCTGCCACTTCGCCGCTGCCCC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTGCTTTGTCGGCCGCTaGCTCCTTCCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSCFVGR*LLPGLG
Trigger: CCCCAGGCCGGGAAGGAGCCAGCGGCCGACAAAGCA...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACCCACTTCCAGCGGCTaGCAGAGGGTATCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKPTSSG*QRVSPG
Trigger: CCCCGGGGATACCCTCTGCCAGCCGCTGGAAGTGGG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGTGCATGATCGGATTCTaGGTCAGCCCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPCMIGF*VSPQAS
Trigger: GGAGGCCTGCGGGCTGACCCAGAATCCGATCATGCA...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCACAGGGCAGACGGAGCTGGAACACGGGAGGGGCTCCACAGCGCTCTCCTCCATGCTGTGACGCTCGCTaGACGCAGGGCTTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AQGRRSWNTGGAPQRSPPCCDAR*TQGLEE
Trigger: CTCTTCCAAGCCCTGCGTCCAGCGAGCGTCACAGCA...TGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATACTCGTACAGCGCCTTaGTGCCACTCACCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNTRTAP*CHSPRA
Trigger: CGCGCGAGGTGAGTGGCATCAAGGCGCTGTACGAGT...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGTCTTGGCGCTCTTGTTaGCCTCGTCCAACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGSWRSC*PRPTLP
Trigger: GGGCAGAGTTGGACGAGGTCAACAAGAGCGCCAAGA...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGGAGTGGGGTGGGATTaGAAAGTCTCCGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAGVGWD*KVSGAA
Trigger: CGCTGCCCCGGAGACTTTTCAATCCCACCCCACTCC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGTTGAAGTCGTACTCCTaGTGCCGGCTGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPLKSYS*CRLLST
Trigger: GGTGGACAGCAGCCGGCAGCAGGAGTACGACTTCAA...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATTCGGCCAGCTGCTGCTaGATCACGTCCCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNSASCC*ITSRIS
Trigger: GGAGATGCGGGACGTGATGCAGCAGCAGCTGGCCGA...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATTGGTACTCGGCCAGCTaGTGCTGCATCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNWYSAS*CCITSR
Trigger: GCGGGACGTGATGCAGCAGCAGCTGGCCGAGTACCA...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGAGAAACCCGGCCGGTaGGCTGCCAGAACGGGAATC +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAEKPGR*AARTGI
Trigger: GATTCCCGTTCTGGCAGCGCACCGGCCGGGTTTCTC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGTCACAGGGGAGCGGTaGCGCCCCCGCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLVTGER*RPRPAV
Trigger: CACTGCAGGGCGGGGGCGGCACCGCTCCCCTGTGAC...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp GCACAGGGCAGACGGAGCTGGAACACGGGAGGGGCTCCACAGCGCTCTCCTCCATCCCTGAGCCCAGCCTaGAAGGCTGTCGGCAAATCA +
Preference number: 4 (lower is better)
Translates to: AQGRRSWNTGGAPQRSPPSLSPA*KAVGKS
Trigger: TGATTTGCCGACAGCCTTGCAGGCTGGGCTCAGGGA...TGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGTCCACCTCGCTCCGGTaGAACAGGGACTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLSTSLR*NRDSRS
Trigger: GGACCTGGAGTCCCTGTTCCACCGGAGCGAGGTGGA...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTGCCTGCTGGGCCAGGTaGAAGCCACCGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTACWAR*KPPLPP
Trigger: GGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGC...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CAA 72 bp CCAGCCCCAGCTGCAGCCCAGCTCCGTTTTTGCAGGTaGTGCTGTGACGCTCGCTGGACGCAGGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PAPAAAQLRFCR*CCDARWTQGLE
Trigger: TTCCAAGCCCTGCGTCCAGCGAGCGTCACAGCACAACCTGCAAAAACGGAGCTGGGCTGCAGCTGGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTTTTTTGGCCACTGCATaGCCGTCCTCGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAFLATA*PSSALA
Trigger: GGCCAAGGCCGAGGACGGTCATGCAGTGGCCAAAAA...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGCTCAAGGCCCTGGCGTaGGCTCCTGACCTGTGTACT +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLLKALA*APDLCT
Trigger: AGTACACAGGTCAGGAGCTCACGCCAGGGCCTTGAG...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTAAGTCGTACTCCTGCTaGCGGCTGCTGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAKSYSC*RLLSTS
Trigger: GGAGGTGGACAGCAGCCGGCAGCAGGAGTACGACTT...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTTACTCGGCCAGCTGCTaGTGCATCACGTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAYSASC*CITSRI
Trigger: GATGCGGGACGTGATGCAGCAGCAGCTGGCCGAGTA...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTACCCGGCCGGTGCGCTaGCAGAACGGGAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSTRPVR*QNGNLE
Trigger: TTCCAGATTCCCGTTCTGGCAGCGCACCGGCCGGGT...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACCCGGAGACGGCGCGTaGCCATGGCTCAGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKPGDGA*PWLSFG
Trigger: ACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CTTGAGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCCAGCCCCACACTCACCTCGCGCGTaGTCACCTCCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LELHFLKEALPSEGAPAPHSPRA*SPPPSL
Trigger: CAGAGAAGGAGGAGGTGACCACGCGCGAGGTGAGTG...TGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGTGGCGCTGTCCAGCTTaGCCTGGTAGGTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLWRCPA*PGRSAP
Trigger: TGGAGCAGACCTACCAGGCCAAGCTGGACAGCGCCA...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAGATCTTCAGCGGCACTaGCCTGCTTCTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKDLQRH*PASGGR
Trigger: CCGGCCTCCAGAAGCAGGCCAGTGCCGCTGAAGATC...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGCCAGAACGGGAATCTaGAAGCCCAGGCAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAARTGI*KPRQRS
Trigger: ACTCCGCTGCCTGGGCTTCCAGATTCCCGTTCTGGC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCACAGGGCAGACGGAGCTGGAACACGGGAGGGGCTCCACAGCGCTCTCCTCCAAGAGGGTCAACATGGTaGCGTTCCCTGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: AQGRRSWNTGGAPQRSPPRGSTW*RSLQTA
Trigger: AGCTGTCTGCAGGGAACGCCACCATGTTGACCCTCT...TGGAGGAGAGCGCTGTGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTCCCAGCCAAAGCCGCTaGCATGAGGACAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAPSQSR*HEDRCM
Trigger: CATGCACCTGTCCTCATGCCAGCGGCTTTGGCTGGG...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAGCGCCTGTGCCATCTTaGAGTCGTACTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKAPVPS*SRTPAA
Trigger: GGCAGCAGGAGTACGACTTCAAGATGGCACAGGCGC...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCCAGCTGCCCACACCGTaGCCATCTGGCCGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAQLPTP*PSGRRA
Trigger: TGCGCGCCGGCCAGATGGTCACGGTGTGGGCAGCTG...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCCACCACCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGATCTCCGTCATCTCCTaGTCCTTGGCGTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PTTTEFLRSFRAPSAAGPISVIS*SLASSI
Trigger: GATGCTGGACGCCAAGGAGCAGGAGATGACGGAGAT...CGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGGTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAAGCAGCGGGTGTTTCTaGTTTGTCGGCCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKSSGCF*FVGRWL
Trigger: GAGCCAGCGGCCGACAAAGCAGAAACACCCGCTGCT...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CGTGGCTGCCTGAGGAGTTCCCGCTGTCCGAAGCTGGGCAGCCAGAATGCAGGCGCCTCCAGGAGGAAATaGTTTGGTAAGATGCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGCLRSSRCPKLGSQNAGASRRK*FGKMRP
Trigger: GGGGCGCATCTTACCAAAGCATTTCCTCCTGGAGGC...GCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGGAACTCCTCAGGCAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGTGGCATGAGGACAGGTaGATGATCGGATTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPWHEDR*MIGFWV
Trigger: GACCCAGAATCCGATCATGCACCTGTCCTCATGCCA...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGCAAAGAACTGCCGCGTaGAGGCTTCAGACCAACCCC +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLQRTAA*RLQTNP
Trigger: GGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTG...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACCTCCCCTGCCCTGTTaGCCTTGCACAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKPPLPC*PCTVRN
Trigger: GTTCCTGACTGTGCAAGGCCAACAGGGCAGGGGAGG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTGGGGGTGCCAGGCATTaGGAAGCTGGACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTGGARH*EAGLRG
Trigger: GCCCCTCAGTCCAGCTTCCCAATGCCTGGCACCCCC...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGTTTTCAGGACAGGACTaGGCAGCGTCTGGACATGAG +
Preference number: 4 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPFSGQD*AASGHE
Trigger: CTCATGTCCAGACGCTGCCCAGTCCTGTCCTGAAAA...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CTTGAGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCCAGCCCCAGCTTCAGCGTTAACCTaGCGCTGTGCACCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LELHFLKEALPSEGAPAPASALT*RCAPQN
Trigger: GTTCTGGGGTGCACAGCGCCAGGTTAACGCTGAAGC...TGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCCACCACCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGCAGTTCCCCAGAGACTaGTCCTTGTCCGAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PTTTEFLRSFRAPSAAGPQFPRD*SLSELF
Trigger: GAACAACTCGGACAAGGATCAGTCTCTGGGGAACTG...CGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGGTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGCCTGGGCTTCCAATTTaGCCAAATGGTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGPGLPI*PNGEMR
Trigger: CCTCATCTCACCATTTGGTCAAATTGGAAGCCCAGG...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGTACATAGGATGTGGCTaGGACCACTGCAGACTCCCC +
Preference number: 4 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLYIGCG*DHCRLP
Trigger: GGGGAGTCTGCAGTGGTCTCAGCCACATCCTATGTA...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTACTGAGGGGCTTGGGTaGGTCGTGATAGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSTEGLG*VVIGVR
Trigger: CCTGACTCCTATCACGACGCACCCAAGCCCCTCAGT...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCGACCGTCCTCGGCCTTaGCCAGCTGGGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTDRPRP*PAGPAA
Trigger: AGCTGCGGGCCCAGCTGGCCAAGGCCGAGGACGGTC...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCCCCGCTCCCCGGCCATaGCCTCCTCCAGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFPAPRP*PPPAPE
Trigger: TTCGGGAGCTGGAGGAGGCCATGGCCGGGGAGCGGG...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTCCCGCTGTCCGAAGCTaGGCAGCCAGAATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTPAVRS*AARMQA
Trigger: AGCCTGCATTCTGGCTGCCCAGCTTCGGACAGCGGG...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGAATGCAGGCTTGGCCCCGGGCCCCACCAGGTCGACGCCTGGATTCTGAATTCCAGAGGGTCAACATaGTGGCGTTCCCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: PECRLGPGPHQVDAWILNSRGST*WRSLQT
Trigger: TGTCTGCAGGGAACGCCACCATGTTGACCCTCTGGA...ATTCAGAATCCAGGCGTCGACCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCGGCCGCGCTTGTCGCTaGGGGCAGCTGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DSILNEPPITHRLPSPRFGRACR*GQLPAP
Trigger: TGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGGCC...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCGGGGGACTTTGTCCCTaGGCCCAGCCTGCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAGGLCP*AQPARL
Trigger: CAGCCTTGCAGGCTGGGCTCAGGGACAAAGTCCCCC...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTCCCAATCTCTATCTaGAGCCGGGCACGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSFPISI*SRARSR
Trigger: TCGAGAGCGTGCCCGGCTGCAGATAGAGATTGGGAA...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACTCCTCCAGCGCCTGTaGCATCTTGAAGTCGTACTC +
Preference number: 4 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKLLQRL*HLEVVL
Trigger: GAGTACGACTTCAAGATGGCACAGGCGCTGGAGGAG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTCCTCCAGCTCCCGAATaGGATCTTCAGCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTPPAPE*DLQRHW
Trigger: CCAGTGCCGCTGAAGATCGCATTCGGGAGCTGGAGG...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTGGTCCGGGTGATTCCTaGTATGAAGGTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPAGPGDS*YEGGKE
Trigger: CTCTTTCCCACCTTCATAGCAGGAATCACCCGGACC...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCCAGGGCAGACGGAGCTaGAACACGGGAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAQGRRS*NTGGAP
Trigger: TGGAGCCCCTCCCGTGTTCCAGCTCCGTCTGCCCTG...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCTACCAGCCGCCTGACTaGGAGCACAGCGGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAYQPPD*EHSGVA
Trigger: GGCTACGCCGCTGTGCTCCCAGTCAGGCGGCTGGTA...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAAGACCCACCCCCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGCTTACACAGAGGGATaGTTTCGCATCGTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: PRPTPRTLASTKPSQSGPAYTEG*FRIVLS
Trigger: GCTTAGAACGATGCGAAACCATCCCTCTGTGTAAGC...CGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGGGGGTGGGTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp AGTGAACGCCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTCCCTGCTTATTGTTGTaGCAGGTCTTACGACGGGAC +
Preference number: 4 (lower is better)
Translates to: SERHGPETARAHGSVLVSPCLLL*QVLRRD
Trigger: GTCCCGTCGTAAGACCTGTCACAACAATAAGCAGGG...AGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGGCGTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTTGAGCTGCACTTTCTaGAGGAGGCTCTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTLSCTF*RRLCRR
Trigger: CCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAA...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCACTCCTGCTGCCGGCTaGTGTCCACCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFTPAAG*CPPPPG
Trigger: GCCTGGTGGAGGTGGACAGCAGCCGGCAGCAGGAGT...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCGCACTTGCTCGTCGTaGTGGCTCCGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTRTCSS*WLRSSS
Trigger: GGAGGAGCTGCGGAGCCAGCACGACGAGCAAGTGCG...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGACAAGCTGCCGCTGCTaGTCGAGGTGGCTCGTGAGA +
Preference number: 4 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLTSCRC*SRWLVR
Trigger: TCTCACGAGCCACCTCGAGCAGCAGCGGCAGCTTGT...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCCACCCGCTGCGTGGCTaGCTGAGGAGTTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFHPLRG*LRSSRC
Trigger: ACAGCGGGAACTCCTCAGGCAGCCACGCAGCGGGTG...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCGCGCGAGGATGGGCTaGGGGACAGCTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTRARMG*GTASAS
Trigger: AGAGGCTGAAGCTGTCCCCCAGCCCATCCTCGCGCG...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGCACGTAGCAGCCTCTTaGGGTGGTCCTCGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGHVAAS*GGPRVP
Trigger: GGGGACCCGAGGACCACCTCAAGAGGCTGCTACGTG...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTCCGGGTCCTGGCCCTaGGCTTCCAATTTGACCAAA +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTSGSWP*ASNLTK
Trigger: TTTGGTCAAATTGGAAGCCCAGGGCCAGGACCCGGA...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGTGCACAGTCAGGAACTaGACTGCGGGAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLCTVRN*TAGKLP
Trigger: GGGGAGTTTTCCCGCAGTTCAGTTCCTGACTGTGCA...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCTGGGACCGGGACTTCTaGGAGCAAGGACAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFWDRDF*EQGQRA
Trigger: TGCTCGCTGTCCTTGCTCTCAGAAGTCCCGGTCCCA...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCGGCAGCGTCTGGACATaGGGACCTGCGGGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: DSILNEPPITHRLPSPRFGSVWT*GPAGFG
Trigger: CCCAAAACCCGCAGGTCCTCATGTCCAGACGCTGCC...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCACTTGCTCGTCGTGCTaGCTCCGCAGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DSILNEPPITHRLPSPRFTCSSC*LRSSSS
Trigger: GCTGGAGGAGCTGCGGAGCCAGCACGACGAGCAAGT...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCAGCAGCCTCTTGAGGTaGTCCTCGGGTCCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTSSLLR*SSGPPV
Trigger: AACAGGGGGACCCGAGGACCACCTCAAGAGGCTGCT...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTAGTTTTCAGTGGCTCTaGGTAAAGAAAGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PEPSLARSPASRVRVIPASFQWL*VKKGVW
Trigger: CCACACACCTTTCTTTACCCAGAGCCACTGAAAACT...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCCCTTCTCTGAGATCTTaGGCAGGAGCCGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAPSLRS*AGAGRS
Trigger: AGAACGACCGGCTCCTGCTCAAGATCTCAGAGAAGG...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTGCAGACAGCTGTTCTaGAACTCACAGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTCRQLF*NSQLLP
Trigger: AGGCAGAAGCTGTGAGTTTCAGAACAGCTGTCTGCA...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCGACCTCGTCCAACTCTaGCCTCAGCTTCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRADLVQL*PQLPNL
Trigger: GAGATTGGGAAGCTGAGGGCAGAGTTGGACGAGGTC...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCGCCCAGCTCCGTTTTTaGAGGTTGTGCTGTGACGCT +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAAQLRF*RLCCDA
Trigger: AGCGTCACAGCACAACCTGCAAAAACGGAGCTGGGC...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGGCCGCCTTGTCGTTCTaGTCAGAGCTCAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGAALSF*SELSLA
Trigger: CGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGC...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCAAGGCAAATGTAGGGTaGGGGGTTCTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTKANVG*GVLWAW
Trigger: CCAGGCCCACAGAACCCCCCACCCTACATTTGCCTT...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CAA 72 bp GGGGCTTGGGTGCGTCGTGATAGGAGTCAGGTGGCCTaGGCCTGTCTGAGAAACATGGTTTCAGCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GAWVRRDRSQVA*ACLRNMVSARK
Trigger: TTTTCTCGCTGAAACCATGTTTCTCAGACAGGCCAAGGCCACCTGACTCCTATCACGACGCACCCAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
3UTR CAA 72 bp CATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTaGGTGTCTTTAAGACTTGAGCTGCACTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: HGPETARAHGSV*VSLRLELHFLK
Trigger: CTTCAGAAAGTGCAGCTCAAGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCATGAGGACAGGTGCATaGTCGGATTCTGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFMRTGA*SDSGSA
Trigger: GGCTGACCCAGAATCCGATCATGCACCTGTCCTCAT...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGCAATTACCCACAGGCTaGCCAGTCCACGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGQLPTG*PVHASP
Trigger: GGGAGAAGCGTGGACTGGGCAGCCTGTGGGTAATTG...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCCGTTTTTGCAGGTTGTaGTGTGACGCTCGCTGGACG +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFRFCRL*CDARWT
Trigger: CGTCCAGCGAGCGTCACAGCACAACCTGCAAAAACG...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCTGGCTCGTGAGACGGTaGCGCGCGAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCWLVRR*RARMGW
Trigger: CCAGCCCATCCTCGCGCGTCACCGTCTCACGAGCCA...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCGGATGTACTTGGGCGTaGACTTGTAGGCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFGCTWA*TCRRSP
Trigger: AGGAGATCGCCTACAAGTTCACGCCCAAGTACATCC...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCCAGCCAAAGCCGCTGGGTGTCTTTAAGACTTaGGCTGCACTTTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LTKNCRVQASDQPQPKPLGVFKT*AALSEG
Trigger: TCCTTCAGAAAGTGCAGCTCAAGTCTTAAAGACACC...CAGCGGCTTTGGCTGGGGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGGGGACTCCAGGCGCATaGGGGCCTCCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLGTPGA*GPPSAP
Trigger: AGGAGCTGAAGGAGGCCCGCATGCGCCTGGAGTCCC...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGTCCTTCACACGGCCCTaGGCCACCGTAAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLSFTRP*ATVSSP
Trigger: GGGCGAGCTTACGGTGGCCCAGGGCCGTGTGAAGGA...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCTCCTCCTGCAGGCTCTaGCAGCGGTTCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCSSCRL*QRFSRS
Trigger: GGACCTGGAGAACCGCTGCCAGAGCCTGCAGGAGGA...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCGTAAAGAAAGGTGTGTaGATGAGGAGTGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAVKKGV*MRSVGS
Trigger: TGAACCCACACTCCTCATCCACACACCTTTCTTTAC...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCACCAGGTCGACGCCTaGATTCTGAATTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTHQVDA*ILNLVL
Trigger: CAAAACCAAATTCAGAATCCAGGCGTCGACCTGGTG...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCATTGGGAAGCTGGACTaGGGGGCTTGGGTGCGTCGT +
Preference number: 4 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCIGKLD*GAWVRR
Trigger: ACGACGCACCCAAGCCCCTCAGTCCAGCTTCCCAAT...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCTCCAGGATACAGCTTTaGTCCTCCAGAGCCAAAATA +
Preference number: 4 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFSRIQL*SSRAKI
Trigger: TATTTTGGCTCTGGAGGAGCAAAGCTGTATCCTGGA...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCAGGCATTGGGAAGCTaGACTGAGGGGCTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCQALGS*TEGLGC
Trigger: GCACCCAAGCCCCTCAGTCCAGCTTCCCAATGCCTG...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCAAAATACATAGGATGTaGCTGAGACCACTGCAGACT +
Preference number: 4 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRAKIHRM*LRPLQT
Trigger: AGTCTGCAGTGGTCTCAGCCACATCCTATGTATTTT...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGGGGGTTCTGTGGGCCTaGGGCGTGCTGTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLGVLWA*GVLFSG
Trigger: TCCTGAAAACAGCACGCCCCAGGCCCACAGAACCCC...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCAGACTCAATTCTCAATaGACCTCCAATTACCCACAG +
Preference number: 4 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTRLNSQ*TSNYPQ
Trigger: CTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCT...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTGATAAAAGCACAGTATaGATAGACGCATGTGTATAT +
Preference number: 4 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTDKSTV*IDACVY
Trigger: ATATACACATGCGTCTATCCATACTGTGCTTTTATC...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCTCGACGCCTGGATTCTaGATTTGGTTTTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: DSILNEPPITHRLPSPRFSTPGF*IWFCRK
Trigger: CTTTCTACAAAACCAAATTCAGAATCCAGGCGTCGA...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCTGCTTTTTGGCCACTaGATGACCGTCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLLLFGH*MTVLGL
Trigger: AAGGCCGAGGACGGTCATGCAGTGGCCAAAAAGCAG...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCTGGCCTTGGCCTGTCTaGGAAACATGGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCWPWPV*ETWFQR
Trigger: TCGCTGAAACCATGTTTCTCAGACAGGCCAAGGCCA...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGTGTCCGAGTTGTTCTTaGGCTGCACAAACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLCPSCS*AAQTCP
Trigger: AGGGCAAGTTTGTGCAGCTCAAGAACAACTCGGACA...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR TCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGAAAACCCACCACCACTaGATTCCTACGCAGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLKTHHH*IPTQFP
Trigger: CGGAAACTGCGTAGGAATTCAGTGGTGGTGGGTTTT...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR GCA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCGAGTTGTTCTTGAGCTaGACAAACTTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCELFLS*TNLPSR
Trigger: CCTGGAGGGCAAGTTTGTGCAGCTCAAGAACAACTC...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CCA 90 bp CTTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGACAGCTAAGCGTATTTaGGGACAAATGCAAATTGTT +
Preference number: 4 (lower is better)
Translates to: LSVSKDSILNEPPITHRLTAKRI*GQMQIV
Trigger: AACAATTTGCATTTGTCCCCAAATACGCTTAGCTGT...CAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 90 bp CGCGGCCGGGCAGCGGCGTGGCCATGGTGGCGGCGGCTCGCGGCCTaGGCTGCTCCCGACGGCGGCCCGGGCTCGGCGGGCTCATTCAAT +
Preference number: 5 (lower is better)
Translates to: RGRAAAWPWWRRLAA*AAPDGGPGSAGSFN
Trigger: ATTGAATGAGCCCGCCGAGCCCGGGCCGCCGTCGGGAGCAGCGCAGGCCGCGAGCCGCCGCCACCATGGCCACGCCGCTGCCCGGCCGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 90 bp CGCTACCCGAGGCCGAGGCCTGCTGGGCCAGGTGGAAGCCACCGCTaGCACCCGTGCCCGTGCCCAGGACGCTTGGGCCGCTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: RYPRPRPAGPGGSHR*HPCPCPGRLGRCPR
Trigger: CCTTGGGCAGCGGCCCAAGCGTCCTGGGCACGGGCACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTCGGGTAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 90 bp AGGCCGAGGCCTGCTGGGCCAGGTGGAAGCCACCGCTGCCACCCGTaGCCGTGCCCAGGACGCTTGGGCCGCTGCCCAAGGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: RPRPAGPGGSHRCHP*PCPGRLGRCPRAPP
Trigger: TGGAGGAGCCCTTGGGCAGCGGCCCAAGCGTCCTGGGCACGGGCACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 90 bp AGCCACCGCTGCCACCCGTGCCCGTGCCCAGGACGCTTGGGCCGCTaGCCAAGGGCTCCTCCACCTCCAGCCGCTTCCGCTTACTGCGGC +
Preference number: 5 (lower is better)
Translates to: SHRCHPCPCPGRLGR*PRAPPPPAASAYCG
Trigger: GCCGCAGTAAGCGGAAGCGGCTGGAGGTGGAGGAGCCCTTGGGCAGCGGCCCAAGCGTCCTGGGCACGGGCACGGGTGGCAGCGGTGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 90 bp AGGCCTGCTGGGCCAGGTGGAAGCCACCGCTGCCACCCGTGCCCGTaGCCAGGACGCTTGGGCCGCTGCCCAAGGGCTCCTCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: RPAGPGGSHRCHPCP*PGRLGRCPRAPPPP
Trigger: TGGAGGTGGAGGAGCCCTTGGGCAGCGGCCCAAGCGTCCTGGGCACGGGCACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 90 bp CCTCCACCTCCAGCCGCTTCCGCTTACTGCGGCCCAGGCGCCCGGTaGCGGACAAGCTGCCGCTGCTGCTCGAGGTGGCTCGTGAGACGG +
Preference number: 5 (lower is better)
Translates to: PPPPAASAYCGPGAR*RTSCRCCSRWLVRR
Trigger: CCGTCTCACGAGCCACCTCGAGCAGCAGCGGCAGCTTGTCCGCCACCGGGCGCCTGGGCCGCAGTAAGCGGAAGCGGCTGGAGGTGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS TCA 90 bp GCGCCCGGTGGCGGACAAGCTGCCGCTGCTGCTCGAGGTGGCTCGTaGGACGGTGACGCGCGAGGATGGGCTGGGGGACAGCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: APGGGQAAAAARGGS*DGDARGWAGGQLQP
Trigger: AGGCTGAAGCTGTCCCCCAGCCCATCCTCGCGCGTCACCGTCTCACGAGCCACCTCGAGCAGCAGCGGCAGCTTGTCCGCCACCGGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 90 bp TCCAGGTCGATCTCCTCGATGCTGACGCTACCCGAGGCCGAGGCCTaGTGGGCCAGGTGGAAGCCACCGCTGCCACCCGTGCCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: SRSISSMLTLPEAEA*WARWKPPLPPVPVP
Trigger: GGGCACGGGCACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTCGGGTAGCGTCAGCATCGAGGAGATCGACCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 90 bp AGGTCGATCTCCTCGATGCTGACGCTACCCGAGGCCGAGGCCTGCTaGGCCAGGTGGAAGCCACCGCTGCCACCCGTGCCCGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RSISSMLTLPEAEAC*ARWKPPLPPVPVPR
Trigger: CCTGGGCACGGGCACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTCGGGTAGCGTCAGCATCGAGGAGATCGACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 90 bp CGCGAGCCGCACTGGCCGCCTTGTCGTTCTGGTCAGAGCTCAGCTTaGCGCTGTCCAGCTGTGGGGAGACGGGCGGGTGAGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: REPHWPPCRSGQSSA*RCPAVGRRAGECGR
Trigger: GCGCCCGCACTCACCCGCCCGTCTCCCCACAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490554.5
CDS TCA 90 bp GGGCCCGCAGCTCAGCCACGTCACTCTCCAGGCCGCGCTTGTCGCTaGGGGCAGCTGCCAGCTCCACCTCGCTCCGGTGGAACAGGGACT +
Preference number: 5 (lower is better)
Translates to: GPAAQPRHSPGRACR*GQLPAPPRSGGTGT
Trigger: AGTCCCTGTTCCACCGGAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGGCCTGGAGAGTGACGTGGCTGAGCTGCGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 90 bp TGCCGCGCATGCGCACGAGGCACCCGGCGCGTCTATACAGCGTGTTaGCGCCGGGGCGGAGCCCGGTCGCATCACGTGACGAAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: CRACARGTRRVYTAC*RRGGARSHHVTKSQ
Trigger: CTGACTCTTCGTCACGTGATGCGACCGGGCTCCGCCCCGGCGGCAACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCATGCGCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS GCA 90 bp TACTCACGCTCTGCCTCCAGCTCGTCCCGAAGGGCCTGCCGCGCATaGGCACGAGGCACCCGGCGCGTCTATACAGCGTGTTGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: YSRSASSSSRRACRA*ARGTRRVYTACCRR
Trigger: CCGGCGGCAACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCATGCGCGGCAGGCCCTTCGGGACGAGCTGGAGGCAGAGCGTGAGTA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS GCA 90 bp CTCCGCAGCTCCTCCAGCGCCTGTGCCATCTTGAAGTCGTACTCCTaGTGCCGGCTGCTGTCCACCTCCACCAGGCGCCGCTCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: LRSSSSACAILKSYS*CRLLSTSTRRRSCR
Trigger: GCGGCACGAGCGGCGCCTGGTGGAGGTGGACAGCAGCCGGCAGCAGGAGTACGACTTCAAGATGGCACAGGCGCTGGAGGAGCTGCGGAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000527409.1
ENST00000534495.1
CDS CCA 90 bp CCGCGCTTGTCGCTGAGGGCAGCTGCCAGCTCCACCTCGCTCCGGTaGAACAGGGACTCCAGGTCCTTCACACGGCCCTGGGCCACCGTA +
Preference number: 5 (lower is better)
Translates to: PRLSLRAAASSTSLR*NRDSRSFTRPWATV
Trigger: TACGGTGGCCCAGGGCCGTGTGAAGGACCTGGAGTCCCTGTTCCACCGGAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CTTGAGCTGCACTTTCTGAAGGAGGCTCTGCCGTCGGAGGGTGCCCCAGCCCCACCGTGCCCAGGACGCTaGGGCCGCTGCCCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LELHFLKEALPSEGAPAPPCPGR*GRCPRA
Trigger: AGCCCTTGGGCAGCGGCCCAAGCGTCCTGGGCACGG...TGGGGCTGGGGCACCCTCCGACGGCAGAGCCTCCTTCAGAAAGTGCAGCTCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS TCA 90 bp TGGCGGACAAGCTGCCGCTGCTGCTCGAGGTGGCTCGTGAGACGGTaGCGCGCGAGGATGGGCTGGGGGACAGCTTCAGCCTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: WRTSCRCCSRWLVRR*RARMGWGTASASPP
Trigger: AGGAGGAGAGGCTGAAGCTGTCCCCCAGCCCATCCTCGCGCGTCACCGTCTCACGAGCCACCTCGAGCAGCAGCGGCAGCTTGTCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 90 bp CTCATGCGGAGGCCTGGACCTGCCGTTACCTACACGAGCTACCCGTaGTTGCGACTCCGCGGGAAGAGGGAGGCCCTGACTTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LMRRPGPAVTYTSYP*LRLRGKREALTWPG
Trigger: CCCCGGCCAAGTCAGGGCCTCCCTCTTCCCGCGGAGTCGCAACCACGGGTAGCTCGTGTAGGTAACGGCAGGTCCAGGCCTCCGCATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS-3UTR CAA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTACCCCAGAACCCGCGTaGGTCCAGCAGGCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: PEPSLARSPASRVRVIPATPEPA*VQQAWA
Trigger: GGCCCACGCCTGCTGGACCAACGCGGGTTCTGGGGT...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 90 bp CTCAGCCACGTCACTCTCCAGGCCGCGCTTGTCGCTGAGGGCAGCTaGCAGCTCCACCTCGCTCCGGTGGAACAGGGACTCCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: LSHVTLQAALVAEGS*QLHLAPVEQGLQVL
Trigger: AAGGACCTGGAGTCCCTGTTCCACCGGAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGGCCTGGAGAGTGACGTGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 90 bp GGAACTTGTCCCGCTCCCCGGCCATGGCCTCCTCCAGCTCCCGAATaGGATCTTCAGCGGCACTGGCCTGCTTCTGGAGGCCGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GTCPAPRPWPPPAPE*DLQRHWPASGGRRA
Trigger: AGCTCTCCGGCCTCCAGAAGCAGGCCAGTGCCGCTGAAGATCGCATTCGGGAGCTGGAGGAGGCCATGGCCGGGGAGCGGGACAAGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000490554.5
ENST00000527409.1
CDS CCA 90 bp ACTCCAGGCGCATGCGGGCCTCCTTCAGCTCCTCGCGAGCCGCACTaGCCGCCTTGTCGTTCTGGTCAGAGCTCAGCTTGGCGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TPGACGPPSAPREPH*PPCRSGQSSAWRCP
Trigger: TGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCTGAAGGAGGCCCGCATGCGCCTGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000490554.5
ENST00000527409.1
CDS TCA 90 bp TGCCACTCACCTCGCGCGTGGTCACCTCCTCCTTCTCTGAGATCTTaGGCAGGAGCCGGTCGTTCTCCAGCTCCAGCGCGCGGACGCGGT +
Preference number: 5 (lower is better)
Translates to: CHSPRAWSPPPSLRS*AGAGRSPAPARGRG
Trigger: ACCGCGTCCGCGCGCTGGAGCTGGAGAACGACCGGCTCCTGCTCAAGATCTCAGAGAAGGAGGAGGTGACCACGCGCGAGGTGAGTGGCA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CCA 90 bp CACCGCCTTCGTGGGTCTTTTCCCAGGTGCCCTGTGGGTTCCACCTaGGGCACGTTCCTGGGCCCCCGCACAGAAGCTCTCGTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: HRLRGSFPRCPVGST*GTFLGPRTEALVSL
Trigger: GAGACTCACGAGAGCTTCTGTGCGGGGGCCCAGGAACGTGCCCCAGGTGGAACCCACAGGGCACCTGGGAAAAGACCCACGAAGGCGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527409.1
ENST00000534495.1
CDS GCA 90 bp ATCACTTTGTACTCACGCTCTGCCTCCAGCTCGTCCCGAAGGGCCTaGCGCGCATGCGCACGAGGCACCCGGCGCGTCTATACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: ITLYSRSASSSSRRA*RACARGTRRVYTAC
Trigger: ACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCATGCGCGGCAGGCCCTTCGGGACGAGCTGGAGGCAGAGCGTGAGTACAAAGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CCA 90 bp ACCTCGCTCCGGTGGAACAGGGACTCCAGGTCCTTCACACGGCCCTaGGCCACCGTAAGCTCGCCCTCCCTCTTCTTGGCGCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TSLRWNRDSRSFTRP*ATVSSPSLFLALLL
Trigger: CAACAAGAGCGCCAAGAAGAGGGAGGGCGAGCTTACGGTGGCCCAGGGCCGTGTGAAGGACCTGGAGTCCCTGTTCCACCGGAGCGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CCAGAACCCTCGCTAGCACGAAGCCCAGCCAGTCGGGTCCGGGTGATTCCTGCTAGCATCTTCCGGAACTaGTCCCGCTCCCCGGCCATG +
Preference number: 5 (lower is better)
Translates to: PEPSLARSPASRVRVIPASIFRN*SRSPAM
Trigger: CATGGCCGGGGAGCGGGACAAGTTCCGGAAGATGCT...AGCAGGAATCACCCGGACCCGACTGGCTGGGCTTCGTGCTAGCGAGGGTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTAGCCAGAATGCAGGCTaGGCCCCGGGCCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTSQNAG*APGPTR
Trigger: CCTGGTGGGGCCCGGGGCCAAGCCTGCATTCTGGCT...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGCCTGCCCTGTTGGCCTaGCACAGTCAGGAACTGAAC +
Preference number: 5 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGPALLA*HSQELN
Trigger: GTTCAGTTCCTGACTGTGCAAGGCCAACAGGGCAGG...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAAGCGGGTGTTTCTGCTTaGTCGGCCGCTGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKAGVSA*SAAGSF
Trigger: GAAGGAGCCAGCGGCCGACAAAGCAGAAACACCCGC...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS TCA 90 bp TCTATACAGCGTGTTGCCGCCGGGGCGGAGCCCGGTCGCATCACGTaGCGAAGAGTCAGCTTGTGCAACAGCGTCGGAGGCTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: SIQRVAAGAEPGRIT*RRVSLCNSVGGSLL
Trigger: CAACAGTGAGCCTCCGACGCTGTTGCACAAGCTGACTCTTCGTCACGTGATGCGACCGGGCTCCGCCCCGGCGGCAACACGCTGTATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS-3UTR CAA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGCTCTTCTTGGCGCTCTaGTTGACCTCGTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGLFLAL*LTSSNS
Trigger: AGAGTTGGACGAGGTCAACAAGAGCGCCAAGAAGAG...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAATCGCCCTCCCTCTTCTaGGCGCTCTTGTTGACCTCG +
Preference number: 5 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKSPSLF*ALLLTS
Trigger: CGAGGTCAACAAGAGCGCCAAGAAGAGGGAGGGCGA...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGAGCGCCTGTGCCATCTaGAAGTCGTACTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLSACAI*KSYSCC
Trigger: GCAGCAGGAGTACGACTTCAAGATGGCACAGGCGCT...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CCACTGAATTCCTACGCAGTTTCCGCGCTCCGTCCGCAGCAGGGCCGTCTCCTGTTGAGCTGCACAAACTaGCCCTCCAGGTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: PLNSYAVSALRPQQGRLLLSCTN*PSRSIS
Trigger: GGAGATCGACCTGGAGGGCAAGTTTGTGCAGCTCAA...CAGGAGACGGCCCTGCTGCGGACGGAGCGCGGAAACTGCGTAGGAATTCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp TCAGCTAAGGGCACCCGCAGTCCTAGGACCACCCCCAGCTCCACCCAAGGCAAACTCCGTTTTTGCAGGTaGTGCTGTGACGCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: SAKGTRSPRTTPSSTQGKLRFCR*CCDARW
Trigger: CCAGCGAGCGTCACAGCACAACCTGCAAAAACGGAG...TTTGCCTTGGGTGGAGCTGGGGGTGGTCCTAGGACTGCGGGTGCCCTTAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGCTCTCCAGGCCGCGCTaGTCGCTGAGGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGLSRPR*SLRAAA
Trigger: GGCAGCTGCCCTCAGCGACAAGCGCGGCCTGGAGAG...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp GCGTTAACCTGGCGCTGTGCACCCCAGAACCCGCGTTGGTCCAGCAGGCGTGGGGCCCATGGCTCAGTTTaGGTGTCTTTAAGACTTGAG +
Preference number: 5 (lower is better)
Translates to: ALTWRCAPQNPRWSSRRGAHGSV*VSLRLE
Trigger: CTCAAGTCTTAAAGACACCAAAACTGAGCCATGGGC...CCCACGCCTGCTGGACCAACGCGGGTTCTGGGGTGCACAGCGCCAGGTTAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp GCTGTCGGCAAATCACAGACCAACTCCAGGATACAGCTTTGCTCCTCCAGAGCCCTTGTAGAGCCGCACTaGCTCGTCGTGCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: AVGKSQTNSRIQLCSSRALVEPH*LVVLAP
Trigger: CGGAGCCAGCACGACGAGCAAGTGCGGCTCTACAAG...GGCTCTGGAGGAGCAAAGCTGTATCCTGGAGTTGGTCTGTGATTTGCCGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp TCCTGCTATGAAGGTGGGAAAGAGGACACAGTCTGTCGCCAGCATTCCCACTTCGCCGCACTGGCCGCCTaGTCGTTCTGGTCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SCYEGGKEDTVCRQHSHFAALAA*SFWSEL
Trigger: GAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGC...GAAGTGGGAATGCTGGCGACAGACTGTGTCCTCTTTCCCACCTTCATAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS TCA 90 bp GGTGTGTGGATGAGGAGTGTGGGTTCACATCACGTAGCAGCCTCTTaGGGTGGTCCTCGGGTCCCCCTGTTGGTGGAAAAGATCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GVWMRSVGSHHVAAS*GGPRVPLLVEKILL
Trigger: GAGGAGGATCTTTTCCACCAACAGGGGGACCCGAGGACCACCTCAAGAGGCTGCTACGTGATGTGAACCCACACTCCTCATCCACACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CCA 90 bp GTGGATGAGGAGTGTGGGTTCACATCACGTAGCAGCCTCTTGAGGTaGTCCTCGGGTCCCCCTGTTGGTGGAAAAGATCCTCCTCGCCAA +
Preference number: 5 (lower is better)
Translates to: VDEECGFTSRSSLLR*SSGPPVGGKDPPRQ
Trigger: TTGGCGAGGAGGATCTTTTCCACCAACAGGGGGACCCGAGGACCACCTCAAGAGGCTGCTACGTGATGTGAACCCACACTCCTCATCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTTCTTGGCGCTCTTGTaGACCTCGTCCAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTFLALL*TSSNSA
Trigger: GGCAGAGTTGGACGAGGTCAACAAGAGCGCCAAGAA...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CCA 90 bp GACGAAGAGTCAGCTTGTGCAACAGCGTCGGAGGCTCACTGTTGGTaGAAAAGATCCTCCTCGCCAAACTCGGCTTCCTCCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: DEESACATASEAHCW*KRSSSPNSASSSSS
Trigger: GGAAGAGGAGGAGGAAGCCGAGTTTGGCGAGGAGGATCTTTTCCACCAACAGTGAGCCTCCGACGCTGTTGCACAAGCTGACTCTTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CCA 90 bp CGTGACGAAGAGTCAGCTTGTGCAACAGCGTCGGAGGCTCACTGTTaGTGGAAAAGATCCTCCTCGCCAAACTCGGCTTCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RDEESACATASEAHC*WKRSSSPNSASSSS
Trigger: AGAGGAGGAGGAAGCCGAGTTTGGCGAGGAGGATCTTTTCCACCAACAGTGAGCCTCCGACGCTGTTGCACAAGCTGACTCTTCGTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS-3UTR CAA 90 bp GACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCCCAGTCCACGCTTCTGGTCAGAGCTCAGCTaGGCGCTGTCCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DSILNEPPITHRLPSPRFWSELS*ALSSLA
Trigger: GGCCAAGCTGGACAGCGCCAAGCTGAGCTCTGACCA...GAAGCGTGGACTGGGCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp CCATGGCCCGGAGACGGCGCGTGCCCATGGCTCAGTTTTGGTGTCTTTAAGACTTTGTCCGAGTTGTTCTaGAGCTGCACAAACTTGCCC +
Preference number: 5 (lower is better)
Translates to: PWPGDGACPWLSFGVFKTLSELF*SCTNLP
Trigger: GGGCAAGTTTGTGCAGCTCAAGAACAACTCGGACAA...AGTCTTAAAGACACCAAAACTGAGCCATGGGCACGCGCCGTCTCCGGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp ACAGAGGGATGGTTTCGCATCGTTCTAAGCGGCACACAGCTAAGCGTATTTGGGTCCTTCTCTGAGATCTaGAGCAGGAGCCGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: TEGWFRIVLSGTQLSVFGSFSEI*SRSRSF
Trigger: GAACGACCGGCTCCTGCTCAAGATCTCAGAGAAGGA...CCCAAATACGCTTAGCTGTGTGCCGCTTAGAACGATGCGAAACCATCCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp GGAGTCCCTCAGATCTTTAACAAAGAACTGCCGCGTGCAGGCTTCAGACCAACCCTCCAGGATACAGCTTaGCTCCTCCAGAGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: GVPQIFNKELPRAGFRPTLQDTA*LLQSQN
Trigger: ATTTTGGCTCTGGAGGAGCAAAGCTGTATCCTGGAG...GGTTGGTCTGAAGCCTGCACGCGGCAGTTCTTTGTTAAAGATCTGAGGGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCGACTCGTACAGCGCCTaGATGCCACTCACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCDSYSA*MPLTSR
Trigger: GCGCGAGGTGAGTGGCATCAAGGCGCTGTACGAGTC...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS-3UTR CAA 90 bp TTAGTGTTTCCAAAGACTCAATTCTCAATGAACCTCCAATTACCCACAGGCTGCTCACGTAGCAGCCTCTaGAGGTGGTCCTCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: LVFPKTQFSMNLQLPTGCSRSSL*RWSSGP
Trigger: GGGACCCGAGGACCACCTCAAGAGGCTGCTACGTGA...GCAGCCTGTGGGTAATTGGAGGTTCATTGAGAATTGAGTCTTTGGAAACACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 72 bp TGCCACCCGTGCCCGTGCCCAGGACGCTTGGGCCGCTaGCCAAGGGCTCCTCCACCTCCAGCCGCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: CHPCPCPGRLGR*PRAPPPPAASA
Trigger: AGCGGAAGCGGCTGGAGGTGGAGGAGCCCTTGGGCAGCGGCCCAAGCGTCCTGGGCACGGGCACGGGTGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 72 bp CCAGCCGCTTCCGCTTACTGCGGCCCAGGCGCCCGGTaGCGGACAAGCTGCCGCTGCTGCTCGAGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PAASAYCGPGAR*RTSCRCCSRWL
Trigger: GAGCCACCTCGAGCAGCAGCGGCAGCTTGTCCGCCACCGGGCGCCTGGGCCGCAGTAAGCGGAAGCGGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 72 bp TGCGCACGAGGCACCCGGCGCGTCTATACAGCGTGTTaGCGCCGGGGCGGAGCCCGGTCGCATCACGTGACG +
Preference number: 6 (lower is better)
Translates to: CARGTRRVYTAC*RRGGARSHHVT
Trigger: CGTCACGTGATGCGACCGGGCTCCGCCCCGGCGGCAACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CCA 72 bp TCCTCGATGCTGACGCTACCCGAGGCCGAGGCCTGCTaGGCCAGGTGGAAGCCACCGCTGCCACCCGTGCCC +
Preference number: 6 (lower is better)
Translates to: SSMLTLPEAEAC*ARWKPPLPPVP
Trigger: GGGCACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTCGGGTAGCGTCAGCATCGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 72 bp GTTCTGGTCAGAGCTCAGCTTGGCGCTGTCCAGCTGTaGGGAGACGGGCGGGTGAGTGCGGGCGCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: VLVRAQLGAVQL*GDGRVSAGAGR
Trigger: CCGCCCCGCGCCCGCACTCACCCGCCCGTCTCCCCACAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490554.5
CDS CAA 90 bp GCCAGCTGGGCCCGCAGCTCAGCCACGTCACTCTCCAGGCCGCGCTaGTCGCTGAGGGCAGCTGCCAGCTCCACCTCGCTCCGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: ASWARSSATSLSRPR*SLRAAASSTSLRWN
Trigger: GTTCCACCGGAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGGCCTGGAGAGTGACGTGGCTGAGCTGCGGGCCCAGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS TCA 72 bp GGCGGACAAGCTGCCGCTGCTGCTCGAGGTGGCTCGTaGGACGGTGACGCGCGAGGATGGGCTGGGGGACAG +
Preference number: 6 (lower is better)
Translates to: GGQAAAAARGGS*DGDARGWAGGQ
Trigger: CTGTCCCCCAGCCCATCCTCGCGCGTCACCGTCTCACGAGCCACCTCGAGCAGCAGCGGCAGCTTGTCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CAA 72 bp GCCCGCAGCTCAGCCACGTCACTCTCCAGGCCGCGCTaGTCGCTGAGGGCAGCTGCCAGCTCCACCTCGCTC +
Preference number: 6 (lower is better)
Translates to: ARSSATSLSRPR*SLRAAASSTSL
Trigger: GAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGGCCTGGAGAGTGACGTGGCTGAGCTGCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CAA 72 bp ATGCGCACGAGGCACCCGGCGCGTCTATACAGCGTGTaGCCGCCGGGGCGGAGCCCGGTCGCATCACGTGAC +
Preference number: 6 (lower is better)
Translates to: MRTRHPARLYSV*PPGRSPVASRD
Trigger: GTCACGTGATGCGACCGGGCTCCGCCCCGGCGGCAACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CAA 90 bp CTGCCGCGCATGCGCACGAGGCACCCGGCGCGTCTATACAGCGTGTaGCCGCCGGGGCGGAGCCCGGTCGCATCACGTGACGAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: LPRMRTRHPARLYSV*PPGRSPVASRDEES
Trigger: TGACTCTTCGTCACGTGATGCGACCGGGCTCCGCCCCGGCGGCAACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCATGCGCGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS TCA 72 bp AGCTGCCGCTGCTGCTCGAGGTGGCTCGTGAGACGGTaGCGCGCGAGGATGGGCTGGGGGACAGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SCRCCSRWLVRR*RARMGWGTASA
Trigger: GGCTGAAGCTGTCCCCCAGCCCATCCTCGCGCGTCACCGTCTCACGAGCCACCTCGAGCAGCAGCGGCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 72 bp CCCGCTCCCCGGCCATGGCCTCCTCCAGCTCCCGAATaGGATCTTCAGCGGCACTGGCCTGCTTCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PAPRPWPPPAPE*DLQRHWPASGG
Trigger: GCCTCCAGAAGCAGGCCAGTGCCGCTGAAGATCGCATTCGGGAGCTGGAGGAGGCCATGGCCGGGGAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000490554.5
ENST00000527409.1
CDS GCA 72 bp ATCTCCTCGATGCTGACGCTACCCGAGGCCGAGGCCTaGTGGGCCAGGTGGAAGCCACCGCTGCCACCCGTG +
Preference number: 6 (lower is better)
Translates to: ISSMLTLPEAEA*WARWKPPLPPV
Trigger: CACGGGTGGCAGCGGTGGCTTCCACCTGGCCCAGCAGGCCTCGGCCTCGGGTAGCGTCAGCATCGAGGAGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS GCA 72 bp TCTGCCTCCAGCTCGTCCCGAAGGGCCTGCCGCGCATaGGCACGAGGCACCCGGCGCGTCTATACAGCGTGT +
Preference number: 6 (lower is better)
Translates to: SASSSSRRACRA*ARGTRRVYTAC
Trigger: ACACGCTGTATAGACGCGCCGGGTGCCTCGTGCGCATGCGCGGCAGGCCCTTCGGGACGAGCTGGAGGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CAA 90 bp CGCATGCGGGCCTCCTTCAGCTCCTCGCGAGCCGCACTGGCCGCCTaGTCGTTCTGGTCAGAGCTCAGCTTGGCGCTGTCCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RMRASFSSSRAALAA*SFWSELSLALSSLA
Trigger: GGCCAAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCTGAAGGAGGCCCGCATGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000527409.1
CDS CAA 90 bp CGCATGCGGGCCTCCTTCAGCTCCTCGCGAGCCGCACTGGCCGCCTaGTCGTTCTGGTCAGAGCTCAGCTTGGCGCTGTCCAGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: RMRASFSSSRAALAA*SFWSELSLALSSCG
Trigger: CCCACAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCTGAAGGAGGCCCGCATGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490554.5
CDS TCA 72 bp CGTGTTGCCGCCGGGGCGGAGCCCGGTCGCATCACGTaGCGAAGAGTCAGCTTGTGCAACAGCGTCGGAGGC +
Preference number: 6 (lower is better)
Translates to: RVAAGAEPGRIT*RRVSLCNSVGG
Trigger: GCCTCCGACGCTGTTGCACAAGCTGACTCTTCGTCACGTGATGCGACCGGGCTCCGCCCCGGCGGCAACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS GCA 72 bp GTCACTCTCCAGGCCGCGCTTGTCGCTGAGGGCAGCTaGCAGCTCCACCTCGCTCCGGTGGAACAGGGACTC +
Preference number: 6 (lower is better)
Translates to: VTLQAALVAEGS*QLHLAPVEQGL
Trigger: GAGTCCCTGTTCCACCGGAGCGAGGTGGAGCTGGCAGCTGCCCTCAGCGACAAGCGCGGCCTGGAGAGTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CAA 90 bp ATGCGGAGGCCTGGACCTGCCGTTACCTACACGAGCTACCCGTGGTaGCGACTCCGCGGGAAGAGGGAGGCCCTGACTTGGCCGGGGAGT +
Preference number: 6 (lower is better)
Translates to: MRRPGPAVTYTSYPW*RLRGKREALTWPGS
Trigger: ACTCCCCGGCCAAGTCAGGGCCTCCCTCTTCCCGCGGAGTCGCAACCACGGGTAGCTCGTGTAGGTAACGGCAGGTCCAGGCCTCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CCA 72 bp CGGTGGAACAGGGACTCCAGGTCCTTCACACGGCCCTaGGCCACCGTAAGCTCGCCCTCCCTCTTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: RWNRDSRSFTRP*ATVSSPSLFLA
Trigger: CGCCAAGAAGAGGGAGGGCGAGCTTACGGTGGCCCAGGGCCGTGTGAAGGACCTGGAGTCCCTGTTCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CCA 72 bp AGCTCCTCGCGAGCCGCACTGGCCGCCTTGTCGTTCTaGTCAGAGCTCAGCTTGGCGCTGTCCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SSSRAALAALSF*SELSLALSSLA
Trigger: GGCCAAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000527409.1
CDS CCA 72 bp GCATGCGGGCCTCCTTCAGCTCCTCGCGAGCCGCACTaGCCGCCTTGTCGTTCTGGTCAGAGCTCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: ACGPPSAPREPH*PPCRSGQSSAW
Trigger: CCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCTGAAGGAGGCCCGCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000490554.5
ENST00000527409.1
CDS CCA 72 bp AGCTCCTCGCGAGCCGCACTGGCCGCCTTGTCGTTCTaGTCAGAGCTCAGCTTGGCGCTGTCCAGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SSSRAALAALSF*SELSLALSSCG
Trigger: CCCACAGCTGGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490554.5
CDS CAA 72 bp GCCTCCTTCAGCTCCTCGCGAGCCGCACTGGCCGCCTaGTCGTTCTGGTCAGAGCTCAGCTTGGCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: ASFSSSRAALAA*SFWSELSLALS
Trigger: GGACAGCGCCAAGCTGAGCTCTGACCAGAACGACAAGGCGGCCAGTGCGGCTCGCGAGGAGCTGAAGGAGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000490554.5
ENST00000527409.1
CDS TCA 72 bp CCTCGCGCGTGGTCACCTCCTCCTTCTCTGAGATCTTaGGCAGGAGCCGGTCGTTCTCCAGCTCCAGCGCGC +
Preference number: 6 (lower is better)
Translates to: PRAWSPPPSLRS*AGAGRSPAPAR
Trigger: GCGCGCTGGAGCTGGAGAACGACCGGCTCCTGCTCAAGATCTCAGAGAAGGAGGAGGTGACCACGCGCGAGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS TCA 72 bp GCTGGCTCCGCAGCTCCTCCAGCGCCTGTGCCATCTTaGAGTCGTACTCCTGCTGCCGGCTGCTGTCCACCT +
Preference number: 6 (lower is better)
Translates to: AGSAAPPAPVPS*SRTPAAGCCPP
Trigger: AGGTGGACAGCAGCCGGCAGCAGGAGTACGACTTCAAGATGGCACAGGCGCTGGAGGAGCTGCGGAGCCAGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000527409.1
ENST00000534495.1
CDS TCA 72 bp GCACAAACTTGCCCTCCAGGTCGATCTCCTCGATGCTaGCGCTACCCGAGGCCGAGGCCTGCTGGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: AQTCPPGRSPRC*RYPRPRPAGPG
Trigger: ACCTGGCCCAGCAGGCCTCGGCCTCGGGTAGCGTCAGCATCGAGGAGATCGACCTGGAGGGCAAGTTTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000490554.5
CDS CCA 72 bp CCAGCATCTTCCGGAACTTGTCCCGCTCCCCGGCCATaGCCTCCTCCAGCTCCCGAATGCGATCTTCAGCGG +
Preference number: 6 (lower is better)
Translates to: PASSGTCPAPRP*PPPAPECDLQR
Trigger: CCGCTGAAGATCGCATTCGGGAGCTGGAGGAGGCCATGGCCGGGGAGCGGGACAAGTTCCGGAAGATGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325327.4
ENST00000490554.5
ENST00000527409.1
CDS CCA 72 bp AGGCCTGGACCTGCCGTTACCTACACGAGCTACCCGTaGTTGCGACTCCGCGGGAAGAGGGAGGCCCTGACT +
Preference number: 6 (lower is better)
Translates to: RPGPAVTYTSYP*LRLRGKREALT
Trigger: AGTCAGGGCCTCCCTCTTCCCGCGGAGTCGCAACCACGGGTAGCTCGTGTAGGTAACGGCAGGTCCAGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CAA 72 bp CCTGGACCTGCCGTTACCTACACGAGCTACCCGTGGTaGCGACTCCGCGGGAAGAGGGAGGCCCTGACTTGG +
Preference number: 6 (lower is better)
Translates to: PGPAVTYTSYPW*RLRGKREALTW
Trigger: CCAAGTCAGGGCCTCCCTCTTCCCGCGGAGTCGCAACCACGGGTAGCTCGTGTAGGTAACGGCAGGTCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CCA 72 bp CCACACGCATCAGCGTCTCCTTCTCCAGCTGCTTTTTaGCCACTGCATGACCGTCCTCGGCCTTGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: PHASASPSPAAF*PLHDRPRPWPA
Trigger: AGCTGGCCAAGGCCGAGGACGGTCATGCAGTGGCCAAAAAGCAGCTGGAGAAGGAGACGCTGATGCGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CCA 72 bp CAGCCTCTTGAGGTGGTCCTCGGGTCCCCCTGTTGGTaGAAAAGATCCTCCTCGCCAAACTCGGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: QPLEVVLGSPCW*KRSSSPNSASS
Trigger: GGAGGAAGCCGAGTTTGGCGAGGAGGATCTTTTCCACCAACAGGGGGACCCGAGGACCACCTCAAGAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS GCA 72 bp CCTCTTCTTGGCGCTCTTGTTGACCTCGTCCAACTCTaGCCTCAGCTTCCCAATCTCTATCTGCAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: PLLGALVDLVQL*PQLPNLYLQPG
Trigger: GCCCGGCTGCAGATAGAGATTGGGAAGCTGAGGGCAGAGTTGGACGAGGTCAACAAGAGCGCCAAGAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CAA 90 bp AGGTGTGTGGATGAGGAGTGTGGGTTCACATCACGTAGCAGCCTCTaGAGGTGGTCCTCGGGTCCCCCTGTTGGTGGAAAAGATCCTCCT +
Preference number: 6 (lower is better)
Translates to: RCVDEECGFTSRSSL*RWSSGPPVGGKDPP
Trigger: AGGAGGATCTTTTCCACCAACAGGGGGACCCGAGGACCACCTCAAGAGGCTGCTACGTGATGTGAACCCACACTCCTCATCCACACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS TCA 72 bp ATGAGGAGTGTGGGTTCACATCACGTAGCAGCCTCTTaGGGTGGTCCTCGGGTCCCCCTGTTGGTGGAAAAG +
Preference number: 6 (lower is better)
Translates to: MRSVGSHHVAAS*GGPRVPLLVEK
Trigger: CTTTTCCACCAACAGGGGGACCCGAGGACCACCTCAAGAGGCTGCTACGTGATGTGAACCCACACTCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CCA 72 bp TCAGCTTGTGCAACAGCGTCGGAGGCTCACTGTTGGTaGAAAAGATCCTCCTCGCCAAACTCGGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SACATASEAHCW*KRSSSPNSASS
Trigger: GGAGGAAGCCGAGTTTGGCGAGGAGGATCTTTTCCACCAACAGTGAGCCTCCGACGCTGTTGCACAAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CCA 72 bp GAGTCAGCTTGTGCAACAGCGTCGGAGGCTCACTGTTaGTGGAAAAGATCCTCCTCGCCAAACTCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: ESACATASEAHC*WKRSSSPNSAS
Trigger: GGAAGCCGAGTTTGGCGAGGAGGATCTTTTCCACCAACAGTGAGCCTCCGACGCTGTTGCACAAGCTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS CAA 72 bp GATGAGGAGTGTGGGTTCACATCACGTAGCAGCCTCTaGAGGTGGTCCTCGGGTCCCCCTGTTGGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: DEECGFTSRSSL*RWSSGPPVGGK
Trigger: TTTTCCACCAACAGGGGGACCCGAGGACCACCTCAAGAGGCTGCTACGTGATGTGAACCCACACTCCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325327.4
CDS CAA 72 bp AGAGTCAGCTTGTGCAACAGCGTCGGAGGCTCACTGTaGGTGGAAAAGATCCTCCTCGCCAAACTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: RVSLCNSVGGSL*VEKILLAKLGF
Trigger: GAAGCCGAGTTTGGCGAGGAGGATCTTTTCCACCAACAGTGAGCCTCCGACGCTGTTGCACAAGCTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532465.1
CDS TCA 72 bp AGTTCCCCAGAGACTGATCCTTGTCCGAGTTGTTCTTaGGCTGCACAAACTTGCCCTCCAGGTCGATCTCCT +
Preference number: 6 (lower is better)
Translates to: SSPETDPCPSCS*AAQTCPPGRSP
Trigger: AGGAGATCGACCTGGAGGGCAAGTTTGTGCAGCTCAAGAACAACTCGGACAAGGATCAGTCTCTGGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325327.4
ENST00000532465.1
CDS CCA 72 bp AATAGTTTTCAGTGGCTCTGGGTAAAGAAAGGTGTGTaGATGAGGAGTGTGGGTTCACATCACGTAGCAGCC +
Preference number: 6 (lower is better)
Translates to: NSFQWLWVKKGV*MRSVGSHHVAA
Trigger: GGCTGCTACGTGATGTGAACCCACACTCCTCATCCACACACCTTTCTTTACCCAGAGCCACTGAAAACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325327.4