RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMNB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113368

Ensembl transcript IDs: ENST00000261366.10, ENST00000395354.1, ENST00000460265.5, ENST00000463908.2, ENST00000472034.5, ENST00000492190.5, ENST00000494185.1, ENST00000504788.5

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCAACCCTCTTCCGCTTTCCTCTAGTTGTACGTACACTACGACTTaGGGATGCTCGGGATACTGTCACACGGGAAGAAGGGCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: INPLPLSSSCTYTTT*GCSGYCHTGRRAWR
Trigger: TCTCCAAGCCCTTCTTCCCGTGTGACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTACAACTAGAGGAAAGCGGAAGAGGGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR TCA 90 bp AGAGAAACCCTTCCCTCCCTCCACCTCCCTCCCCCACCCTCCTCATaGATTAAGAATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTT +
Preference number: 1 (lower is better)
Translates to: RETLPSLHLPPPPSS*IKNLREEVTIKPSF
Trigger: AAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATTCTTAATTCATGAGGAGGGTGGGGGAGGGAGGTGGAGGGAGGGAAGGGTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
3UTR-3UTR GCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTTCACATCTTCGCCAGTaGCCCACGAGTTCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPSHLRQ*PTSSGS
Trigger: AGAACCAGAACTCGTGGGGCACTGGCGAAGATGTGA...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTCACCAAGACGCACAGTaGTTTATTTACCCTCCCCTC +
Preference number: 2 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPHQDAQ*FIYPPL
Trigger: GAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTG...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
3UTR-3UTR CCA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACCCAGATGAGGTCAGTTaGGGGGCTGGCTGTGACACC +
Preference number: 2 (lower is better)
Translates to: ALHCIQVKITILLYFEEDPDEVS*GAGCDT
Trigger: GGTGTCACAGCCAGCCCCCCAACTGACCTCATCTGG...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATGGGGTTCCCTGCTGGTaGAAAAGTTCTTCCTCAACA +
Preference number: 2 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHGVPCW*KSSSST
Trigger: TGTTGAGGAAGAACTTTTCCACCAGCAGGGAACCCC...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR TCA 90 bp CTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACCTCGTGGCTGAGGCGGAATaGGAGATGCTAACACTACTA +
Preference number: 2 (lower is better)
Translates to: LLFFRYGCFKDCTSLSNLVAEAE*EMLTLL
Trigger: TAGTAGTGTTAGCATCTCTCATTCCGCCTCAGCCAC...GAGGTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR TCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACAACATTTCCAGTGGCTaGGGCGGAATGAGAGATGCT +
Preference number: 2 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNNISSG*GGMRDA
Trigger: AGCATCTCTCATTCCGCCTCAGCCACTGGAAATGTT...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR TCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACAGCTGTTGCTGCATTTaGTCCCTTATTTCCGCCATC +
Preference number: 2 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNSCCCI*SLISAI
Trigger: GATGGCGGAAATAAGGGATCAAATGCAGCAACAGCT...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR TCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACGTTTCCTGTAAGCACTaGTTTCCATGTCCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNVSCKH*FPCPGL
Trigger: TAGCCCTGGACATGGAAATCAGTGCTTACAGGAAAC...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR TCA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACACGTACACTACGACTTaGGGATGCTCGGGATACTGT +
Preference number: 2 (lower is better)
Translates to: ALHCIQVKITILLYFEEDTYTTT*GCSGYC
Trigger: ACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGT...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CCA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACTCTATTGGATGCTCTTaGGGTTCCCTGCTGGTGGAA +
Preference number: 2 (lower is better)
Translates to: ALHCIQVKITILLYFEEDSIGCS*GSLLVE
Trigger: TTCCACCAGCAGGGAACCCCAAGAGCATCCAATAGA...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTTTGCACAGCTTCTATTaGATGCTCTTGGGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGLHSFY*MLLGFP
Trigger: AGGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAA...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTCAAATTGTAACAGTCTaGCCTGCCTTCAGCACATAT +
Preference number: 2 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGQIVTV*PAFSTY
Trigger: ATATGTGCTGAAGGCAGGCCAGACTGTTACAATTTG...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR GCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCACTTTGTCTGTCAGCATaGGACGAGAGTTGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLALCLSA*DESCLF
Trigger: AAAAAGACAACTCTCGTCGCATGCTGACAGACAAAG...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR TCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAAATATTCTGTGCTTCTaGGAAGGCTCTGCACTGTAT +
Preference number: 2 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQNILCF*EGSALY
Trigger: ATACAGTGCAGAGCCTTCTCAGAAGCACAGAATATT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
3UTR TCA 72 bp CTTCCGCTTTCCTCTAGTTGTACGTACACTACGACTTaGGGATGCTCGGGATACTGTCACACGGGAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LPLSSSCTYTTT*GCSGYCHTGRR
Trigger: CCTTCTTCCCGTGTGACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTACAACTAGAGGAAAGCGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR TCA 72 bp CTTCCCTCCCTCCACCTCCCTCCCCCACCCTCCTCATaGATTAAGAATCTAAGAGAAGAAGTAACCATAAAA +
Preference number: 3 (lower is better)
Translates to: LPSLHLPPPPSS*IKNLREEVTIK
Trigger: TTTTATGGTTACTTCTTCTCTTAGATTCTTAATTCATGAGGAGGGTGGGGGAGGGAGGTGGAGGGAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
3UTR-3UTR CAA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATCCAGCCTCCCATTGGTaGATCCTGTTCAGAAGTGTT +
Preference number: 3 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHPASHW*ILFRSV
Trigger: AACACTTCTGAACAGGATCAACCAATGGGAGGCTGG...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATATTGCACAGCTTCTATaGGATGCTCTTGGGGTTCCC +
Preference number: 3 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHIAQLL*DALGVP
Trigger: GGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAAT...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTTTCTATTGGATGCTCTaGGGGTTCCCTGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGFYWML*GFPAGG
Trigger: TCCACCAGCAGGGAACCCCAAGAGCATCCAATAGAA...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCATAGTCATTCAGCTGTaGCTGCATTTGATCCCTTAT +
Preference number: 3 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPIVIQL*LHLIPY
Trigger: ATAAGGGATCAAATGCAGCAACAGCTGAATGACTAT...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTAAAGACTGTACTTCTTaGAGCAACCTCCTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGKDCTS*SNLLSL
Trigger: CAGGGAGAGGAGGTTGCTCAAAGAAGTACAGTCTTT...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTAGCATGCGACGAGAGTaGTCTTTTTCTTTAGCAAGC +
Preference number: 3 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGSMRRE*SFSLAS
Trigger: GCTTGCTAAAGAAAAAGACAACTCTCGTCGCATGCT...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATACAGCTGTTGCTGCATTaGATCCCTTATTTCCGCCAT +
Preference number: 3 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSIQLLLH*IPYFRH
Trigger: ATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTG...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
3UTR-3UTR CAA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTACGTACACTACGACTaGAGGATGCTCGGGATACTG +
Preference number: 3 (lower is better)
Translates to: NLREEVTIKPSFVESIIQYVHYD*RMLGIL
Trigger: CAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR TCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTTGGAGGGGCCGGGCCTaGGAAAGGCGGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPWRGRA*ERREGA
Trigger: GGCTCCTTCCCGCCTTTCTCAGGCCCGGCCCCTCCA...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTAAGGACGCCTGGGACTaGCCACCCGCGCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPKDAWD*PPARLW
Trigger: CCAGAGCCGCGCGGGTGGGCAGTCCCAGGCGTCCTT...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTTGTTTCCTCTCAGGCTaGACGGAGCGGCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPCFLSG*TERRAG
Trigger: CCCCGCCCGCCGCTCCGTGCAGCCTGAGAGGAAACA...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp CTCGGGATACTGTCACACGGGAAGAAGGGCTTGGAGACAGCTTCAACCTCTCTTTCTCCGTCTCCAGGCTaGGCACCTTGTCGATGTACA +
Preference number: 4 (lower is better)
Translates to: LGILSHGKKGLETASTSLSPSPG*APCRCT
Trigger: TGTACATCGACAAGGTGCGCAGCCTGGAGACGGAGA...AAGAGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGTGTGACAGTATCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTTTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPLPSSI*SLARSR
Trigger: CCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAA...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp GCTGTTCATAGTCATTCAGCTGTTGCTGCATTTGATCCCTTATTTCCGCCATCTGTAAGGAAGGACGCCTaGGACTGCCCACCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: AVHSHSAVAAFDPLFPPSVRKDA*DCPPAR
Trigger: CCGCGCGGGTGGGCAGTCCCAGGCGTCCTTCCTTAC...AGATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTGAATGACTATGAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTGGGTCGCAGTCGCCATaGCGGGCGGCGGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGGSQSP*RAAETA
Trigger: CGCTGTCTCCGCCGCCCGCCATGGCGACTGCGACCC...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTCACAAACCGGCGACCTaGGCTCACGTCCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPHKPAT*AHVQTL
Trigger: CAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTG...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CTCGGGATACTGTCACACGGGAAGAAGGGCTTGGAGACAGCTTCAACCTCTCTTACTACTACTCGCCTCTaGTTCTTCCACATCAACCCT +
Preference number: 4 (lower is better)
Translates to: LGILSHGKKGLETASTSLTTTRL*FFHINP
Trigger: AGGGTTGATGTGGAAGAATCAGAGGCGAGTAGTAGT...AAGAGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGTGTGACAGTATCCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGGGGTCGCAGTCGCCATaGCGGGCGGCGGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQGSQSP*RAAETA
Trigger: CGCTGTCTCCGCCGCCCGCCATGGCGACTGCGACCC...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CTCGGGATACTGTCACACGGGAAGAAGGGCTTGGAGACAGCTTCAACCTCTCTTTGTGACACCAGCGTTTaGAGCCCAAATTGTAACAGT +
Preference number: 4 (lower is better)
Translates to: LGILSHGKKGLETASTSLCDTSV*SPNCNS
Trigger: ACTGTTACAATTTGGGCTGCAAACGCTGGTGTCACA...AAGAGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGTGTGACAGTATCCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATCCAGATGAGGTCAGTTaGGGGGCTGGCTGTGACACC +
Preference number: 4 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHPDEVS*GAGCDT
Trigger: GGTGTCACAGCCAGCCCCCCAACTGACCTCATCTGG...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAACCCGGCGCCTCCACGTaGCTACCATGGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEEPGAST*LPWANG
Trigger: CCCATTGGCCCATGGTAGTCACGTGGAGGCGCCGGG...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTGCCGCCGCCGTCTCCTaGTCGCAGCACTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGAAAVS*SQHFVS
Trigger: GGAAACAAAGTGCTGCGAGCAGGAGACGGCGGCGGC...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATATTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSILPSSI*SLARSR
Trigger: CCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAA...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCTCACATCTTCGCCAGTaGCCCACGAGTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPSHLRQ*PTSSGS
Trigger: AGAACCAGAACTCGTGGGGCACTGGCGAAGATGTGA...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTGCTCTTGGGGTTCCCTaGTGGTGGAAAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPALGVP*WWKSSS
Trigger: GGAAGAACTTTTCCACCAGCAGGGAACCCCAAGAGC...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATTTCCGGGACGGATCTaGGCCACCGCCCACACTCGG +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLFPGRI*ATAHTR
Trigger: CCGAGTGTGGGCGGTGGCGCAGATCCGTCCCGGAAA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTCTCACGTCCAGACGCTaGCGTTTAGAGGAACGGAGA +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPLTSRR*RLEERR
Trigger: TCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAG...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCACGGGAAGAAGGGCTTaGAGACAGCTTCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPTGRRA*RQLQPL
Trigger: GAGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGT...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCGTGCCCCACGAGTTCTaGTTCTTCCAGATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPVPHEF*FFQMRS
Trigger: TGACCTCATCTGGAAGAACCAGAACTCGTGGGGCAC...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATCCGTCACCTGCAGCTaGAGCGCGCTGTTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLSVTCS*SALFSV
Trigger: GACGGAGAACAGCGCGCTGCAGCTGCAGGTGACGGA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATCGCGCTCCGTCACCTaGAGCTGCAGCGCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEESRSVT*SCSALF
Trigger: GAACAGCGCGCTGCAGCTGCAGGTGACGGAGCGCGA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACCTCGGTCGTGTTCCGCCTTaGACTTGCCCAGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: LLFFRYGCFKDCTSLSNLGRVPP*TCPARS
Trigger: AGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACC...GAGGTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTAACAACCACTCCAGCTaGTTCTTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPNNHSS*FFLLLL
Trigger: GAGGAGGAGGAGGAAGAAGCAGCTGGAGTGGTTGTT...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCACAAGACGAGGGTGACTaGAGGCCCAGCAGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLAQDEGD*RPSRVR
Trigger: GCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTG...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTAGCTGTTGCTGCATTTaGTCCCTTATTTCCGCCATC +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPSCCCI*SLISAI
Trigger: GATGGCGGAAATAAGGGATCAAATGCAGCAACAGCT...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGCACAAACCGGCGACCTaGGCTCACGTCCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQHKPAT*AHVQTL
Trigger: CAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTG...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAATCCGTCACCTGCAGCTaGAGCGCGCTGTTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQSVTCS*SALFSV
Trigger: GACGGAGAACAGCGCGCTGCAGCTGCAGGTGACGGA...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATGCTCTTGGGGTTCCCTaGTGGTGGAAAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHALGVP*WWKSSS
Trigger: GGAAGAACTTTTCCACCAGCAGGGAACCCCAAGAGC...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGCAAGACGAGGGTGACTaGAGGCCCAGCAGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQQDEGD*RPSRVR
Trigger: GCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTG...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTGAGAAGCACCTGGGATaGCGGGAGCTCGATTACAGC +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGEKHLG*RELDYS
Trigger: GCTGTAATCGAGCTCCCGCCATCCCAGGTGCTTCTC...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTGAACGGAGAAGCACCTaGGATGGCGGGAGCTCGATT +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGERRST*DGGSSI
Trigger: AATCGAGCTCCCGCCATCCCAGGTGCTTCTCCGTTC...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACCAGATGAGGTCAGTTaGGGGGCTGGCTGTGACACC +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLPDEVS*GAGCDT
Trigger: GGTGTCACAGCCAGCCCCCCAACTGACCTCATCTGG...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAAATGCAAGACGAGGGTaGCTGGAGGCCCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQNARRG*LEAQQG
Trigger: ACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTTCCTCAGTAAGGCTCTaGCAACGATTCTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPSSVRL*QRFSKS
Trigger: AGATTTGGAGAATCGTTGTCAGAGCCTTACTGAGGA...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTGTTTCCTGTAAGCACTaGTTTCCATGTCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPVSCKH*FPCPGL
Trigger: TAGCCCTGGACATGGAAATCAGTGCTTACAGGAAAC...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTTGTCTCCAATTTTTCTaGTCATCTCCCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPCLQFF*SSPSLP
Trigger: TGGGAGGCTGGGAGATGATCAGAAAAATTGGAGACA...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTACGCACGCGGGAAAATaGAAGACGAGGGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGTHAGK*KTRVTG
Trigger: TCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGT...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAGTTCCGCCTTGCACTTaGCCAGCTCGATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSIVPPCT*PARSAA
Trigger: AGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAAC...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GTTGTACGTACACTACGACTTGAGGATGCTCGGGATACTGTCACACGGGAAGAATCTCCTCTTCATACATaGTTTTGCGAAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VVRTLRLEDARDTVTREESPLHT*FCETPS
Trigger: ACTTGGAGTTTCGCAAAAGCATGTATGAAGAGGAGA...TTCTTCCCGTGTGACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTACCAAGCGCGTTTCATaGTTCCTTCTGGTCTCGTTA +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPTKRVS*FLLVSL
Trigger: TAACGAGACCAGAAGGAAGCATGAAACGCGCTTGGT...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATCTCCCAGCCTCCCATTaGTTGATCCTGTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHLPASH*LILFRS
Trigger: ACTTCTGAACAGGATCAACCAATGGGAGGCTGGGAG...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATCTTGGGGTTCCCTGCTaGTGGAAAAGTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHLGVPC*WKSSSS
Trigger: TGAGGAAGAACTTTTCCACCAGCAGGGAACCCCAAG...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACACGTACACTACGACTTaGGGATGCTCGGGATACTGT +
Preference number: 4 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNTYTTT*GCSGYC
Trigger: ACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGT...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAGTTCCGCCTTGCACTTaGCCAGCTCGATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQVPPCT*PARSAA
Trigger: AGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAAC...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGGTCGTGTTCCGCCTTaGACTTGCCCAGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: SEKALHCIQVKITILLYFGRVPP*TCPARS
Trigger: AGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACC...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGAGAAGCACCTGGGATaGCGGGAGCTCGATTACAGC +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEEEKHLG*RELDYS
Trigger: GCTGTAATCGAGCTCCCGCCATCCCAGGTGCTTCTC...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCATTAAAATCTGGCCCTTaGGCAACCGTCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLALKSGP*ATVSSA
Trigger: GGCCGAGCTGACGGTTGCCCAAGGGCCAGATTTTAA...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR TCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAATGCTCTCTCATCTCATaGAGGGCTTGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQCSLIS*RACASL
Trigger: CAAGCTGGCGCAAGCCCTTCATGAGATGAGAGAGCA...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATCCCCCACCCTCCTCATaGATTAAGAATCTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHPPPSS*IKNLRE
Trigger: TTCTCTTAGATTCTTAATTCATGAGGAGGGTGGGGG...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAACGCACGCGGGAAAATaGAAGACGAGGGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQTHAGK*KTRVTG
Trigger: TCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAATCTCCGTCTCCAGGCTaGGCACCTTGTCGATGTACA +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQSPSPG*APCRCT
Trigger: TGTACATCGACAAGGTGCGCAGCCTGGAGACGGAGA...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTTCTCCTCTTCATACATaGTTTTGCGAAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPSPLHT*FCETPS
Trigger: ACTTGGAGTTTCGCAAAAGCATGTATGAAGAGGAGA...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATTGTGACACCAGCGTTTaGAGCCCAAATTGTAACAGT +
Preference number: 4 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHCDTSV*SPNCNS
Trigger: ACTGTTACAATTTGGGCTGCAAACGCTGGTGTCACA...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAAACAACCACTCCAGCTaGTTCTTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLANNHSS*FFLLLL
Trigger: GAGGAGGAGGAGGAAGAAGCAGCTGGAGTGGTTGTT...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAACTCACGTCCAGACGCTaGCGTTTAGAGGAACGGAGA +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQLTSRR*RLEERR
Trigger: TCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAG...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTTCTCTGATGACAGTCTaGCATTCTCAAGTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPSLMTV*HSQVWH
Trigger: ATGCCAAACTTGAGAATGCCAGACTGTCATCAGAGA...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAGTGCCCCACGAGTTCTaGTTCTTCCAGATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSIVPHEF*FFQMRS
Trigger: TGACCTCATCTGGAAGAACCAGAACTCGTGGGGCAC...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTGGGGTTCCCTGCTGGTaGAAAAGTTCTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGGVPCW*KSSSST
Trigger: TGTTGAGGAAGAACTTTTCCACCAGCAGGGAACCCC...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAGTGGCTGAGGCGGAATaGGAGATGCTAACACTACTA +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLAVAEAE*EMLTLL
Trigger: TAGTAGTGTTAGCATCTCTCATTCCGCCTCAGCCAC...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAAACATTTCCAGTGGCTaGGGCGGAATGAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLANISSG*GGMRDA
Trigger: AGCATCTCTCATTCCGCCTCAGCCACTGGAAATGTT...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCATCTTTCGAATTCAGTaGTGCTTCATATTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPIFRIQ*CFIFSK
Trigger: CTTCGAGAATATGAAGCAGCACTGAATTCGAAAGAT...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTCATCAATTTCTTCGATaGAAACATTTCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPHQFLR*KHFQWL
Trigger: CAGCCACTGGAAATGTTTGCATCGAAGAAATTGATG...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATCACATCTTCGCCAGTaGCCCACGAGTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEESHLRQ*PTSSGS
Trigger: AGAACCAGAACTCGTGGGGCACTGGCGAAGATGTGA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACTTATACAGCCTCACTTaGGCATCATGTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNLYSLT*ASCCSL
Trigger: GAGAGAGCAACATGATGCCCAAGTGAGGCTGTATAA...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTACGGGAAGAAGGGCTTaGAGACAGCTTCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: SEKALHCIQVKITILLYFTGRRA*RQLQPL
Trigger: GAGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGT...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACGGGGTTCCCTGCTGGTaGAAAAGTTCTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: ALHCIQVKITILLYFEEDGVPCW*KSSSST
Trigger: TGTTGAGGAAGAACTTTTCCACCAGCAGGGAACCCC...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATCTATTGGATGCTCTTaGGGTTCCCTGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLSIGCS*GSLLVE
Trigger: TTCCACCAGCAGGGAACCCCAAGAGCATCCAATAGA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACACCAAGACGCACAGTaGTTTATTTACCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLHQDAQ*FIYPPL
Trigger: GAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTG...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTAAGCTGTTGCTGCATTTaGTCCCTTATTTCCGCCATC +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLSCCCI*SLISAI
Trigger: GATGGCGGAAATAAGGGATCAAATGCAGCAACAGCT...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAACGTACACTACGACTTaGGGATGCTCGGGATACTGT +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQTYTTT*GCSGYC
Trigger: ACAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGGTGGCTGAGGCGGAATaGGAGATGCTAACACTACTA +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQVAEAE*EMLTLL
Trigger: TAGTAGTGTTAGCATCTCTCATTCCGCCTCAGCCAC...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTAACATTTCCAGTGGCTaGGGCGGAATGAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: SEKALHCIQVKITILLYFNISSG*GGMRDA
Trigger: AGCATCTCTCATTCCGCCTCAGCCACTGGAAATGTT...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATATGTCTCCAATTTTTCTaGTCATCTCCCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSICLQFF*SSPSLP
Trigger: TGGGAGGCTGGGAGATGATCAGAAAAATTGGAGACA...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACACCAAGCGCGTTTCATaGTTCCTTCTGGTCTCGTTA +
Preference number: 4 (lower is better)
Translates to: ALHCIQVKITILLYFEEDTKRVS*FLLVSL
Trigger: TAACGAGACCAGAAGGAAGCATGAAACGCGCTTGGT...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACCTCCTTTGTCTGTCAGCATaGGACGAGAGTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLFFRYGCFKDCTSLSNLLCLSA*DESCLF
Trigger: AAAAAGACAACTCTCGTCGCATGCTGACAGACAAAG...GAGGTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACTCTCTGATGACAGTCTaGCATTCTCAAGTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNSLMTV*HSQVWH
Trigger: ATGCCAAACTTGAGAATGCCAGACTGTCATCAGAGA...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTTGTAGATTAGAAAGCTaGGATGAAAGGCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPCRLES*DERLSI
Trigger: AATTGAGAGCCTTTCATCCCAGCTTTCTAATCTACA...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp GCTGTTCATAGTCATTCAGCTGTTGCTGCATTTGATCCCTTATTTCCGCCATCTTGTAGATTAGAAAGCTaGGATGAAAGGCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: AVHSHSAVAAFDPLFPPSCRLES*DERLSI
Trigger: AATTGAGAGCCTTTCATCCCAGCTTTCTAATCTACA...AGATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTGAATGACTATGAACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAACTCCCAGCCTCCCATTaGTTGATCCTGTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEELPASH*LILFRS
Trigger: ACTTCTGAACAGGATCAACCAATGGGAGGCTGGGAG...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACCAAATTGTAACAGTCTaGCCTGCCTTCAGCACATAT +
Preference number: 4 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNQIVTV*PAFSTY
Trigger: ATATGTGCTGAAGGCAGGCCAGACTGTTACAATTTG...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAACTTGGGGTTCCCTGCTaGTGGAAAAGTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQLGVPC*WKSSSS
Trigger: TGAGGAAGAACTTTTCCACCAGCAGGGAACCCCAAG...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTCTATTGGATGCTCTTaGGGTTCCCTGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQSIGCS*GSLLVE
Trigger: TTCCACCAGCAGGGAACCCCAAGAGCATCCAATAGA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATATTGCACAGCTTCTATTaGATGCTCTTGGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSILHSFY*MLLGFP
Trigger: AGGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAA...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAACACCAAGACGCACAGTaGTTTATTTACCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEEHQDAQ*FIYPPL
Trigger: GAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTG...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATCCTCAGTAAGGCTCTaGCAACGATTCTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLSSVRL*QRFSKS
Trigger: AGATTTGGAGAATCGTTGTCAGAGCCTTACTGAGGA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGTTTCCTGTAAGCACTaGTTTCCATGTCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SEKALHCIQVKITILLYFVSCKH*FPCPGL
Trigger: TAGCCCTGGACATGGAAATCAGTGCTTACAGGAAAC...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAACTACTACTCGCCTCTaGTTCTTCCACATCAACCCT +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQTTTRL*FFHINP
Trigger: AGGGTTGATGTGGAAGAATCAGAGGCGAGTAGTAGT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATATCTCGAAGCTTGATCTaGGCGCCATTAAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSISRSLI*APLRSD
Trigger: ATCTGATCTTAATGGCGCCCAGATCAAGCTTCGAGA...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATATGGCATTCTCAAGTTTaGCATGGTAAGTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSIWHSQV*HGKSAP
Trigger: TGGAGCAGACTTACCATGCCAAACTTGAGAATGCCA...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATGGCATTCTCAAGTTTaGCATGGTAAGTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLWHSQV*HGKSAP
Trigger: TGGAGCAGACTTACCATGCCAAACTTGAGAATGCCA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTATTAGAAAGCTGGGATaGAAGGCTCTCAATTCTCAT +
Preference number: 4 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGIRKLG*KALNSH
Trigger: ATGAGAATTGAGAGCCTTTCATCCCAGCTTTCTAAT...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAAATATTCTGTGCTTCTaGGAAGGCTCTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLANILCF*EGSALY
Trigger: ATACAGTGCAGAGCCTTCTCAGAAGCACAGAATATT...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR TCA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTCCCCCACCCTCCTCATaGATTAAGAATCTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SEKALHCIQVKITILLYFPPPSS*IKNLRE
Trigger: TTCTCTTAGATTCTTAATTCATGAGGAGGGTGGGGG...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATGCAGTAGCAAGAGCTaGATCTTTCGAATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEECSSKS*IFRIQC
Trigger: GCACTGAATTCGAAAGATGCAGCTCTTGCTACTGCA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTGCAGTAGCAAGAGCTaGATCTTTCGAATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQCSSKS*IFRIQC
Trigger: GCACTGAATTCGAAAGATGCAGCTCTTGCTACTGCA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACCTTCATACATGCTTTTaGGAAACTCCAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALHCIQVKITILLYFEEDLHTCF*ETPSPQ
Trigger: CTGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAG...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACTTTGTCTGTCAGCATaGGACGAGAGTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLLCLSA*DESCLF
Trigger: AAAAAGACAACTCTCGTCGCATGCTGACAGACAAAG...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTCTCGAAGCTTGATCTaGGCGCCATTAAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQSRSLI*APLRSD
Trigger: ATCTGATCTTAATGGCGCCCAGATCAAGCTTCGAGA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTTATACAGCCTCACTTaGGCATCATGTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQLYSLT*ASCCSL
Trigger: GAGAGAGCAACATGATGCCCAAGTGAGGCTGTATAA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACAAATTGTAACAGTCTaGCCTGCCTTCAGCACATAT +
Preference number: 4 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLQIVTV*PAFSTY
Trigger: ATATGTGCTGAAGGCAGGCCAGACTGTTACAATTTG...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAACTTCATACATGCTTTTaGGAAACTCCAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQLHTCF*ETPSPQ
Trigger: CTGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAG...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCACATCAATTTCTTCGATaGAAACATTTCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLAHQFLR*KHFQWL
Trigger: CAGCCACTGGAAATGTTTGCATCGAAGAAATTGATG...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTGTAAATTTAAAATCTaGCCCTTGGGCAACCGTCAG +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQCKFKI*PLGNRQ
Trigger: CTGACGGTTGCCCAAGGGCCAGATTTTAAATTTACA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR TCA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTATGATGAAACTGATATaGCTCAGCAACAAACACTCT +
Preference number: 4 (lower is better)
Translates to: SEKALHCIQVKITILLYFMMKLI*LSNKHS
Trigger: AGAGTGTTTGTTGCTGAGTCATATCAGTTTCATCAT...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR GCA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATTTCGAATTCAGTGCTaGTTCATATTCTCGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KALHCIQVKITILLYFEEFRIQC*FIFSKL
Trigger: AAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTTTCGAATTCAGTGCTaGTTCATATTCTCGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQFRIQC*FIFSKL
Trigger: AAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR GCA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGATCTTTCGAATTCAGTaGTGCTTCATATTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: NLREEVTIKPSFVESIIQIFRIQ*CFIFSK
Trigger: CTTCGAGAATATGAAGCAGCACTGAATTCGAAAGAT...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS CCA 90 bp ATGGCCGGCACGCCCCGGCGCCTCCACGTGACTACCATGGGCCAATaGGGAGCAGGCAGCGCGCTTCGGCGGTTCGGGGGCCGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: MAGTPRRLHVTTMGQ*GAGSALRRFGGRAC
Trigger: ACAGGCCCGGCCCCCGAACCGCCGAAGCGCGCTGCCTGCTCCCCATTGGCCCATGGTAGTCACGTGGAGGCGCCGGGGCGTGCCGGCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS CCA 90 bp GCTGGTCGTGTTCCGCCTTGCACTTGCCCAGCTCGATCTGCAGCTTaGCGCGCTCGCGGGCCGTGTCGTCGAGCGCGCGTCGCGCGTCGG +
Preference number: 5 (lower is better)
Translates to: AGRVPPCTCPARSAA*RARGPCRRARVARR
Trigger: CCGACGCGCGACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000492190.5
CDS GCA 90 bp AGGAGCAGCTGGTCGTGTTCCGCCTTGCACTTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGGGCCGTGTCGTCGAGCGCGCGTCGC +
Preference number: 5 (lower is better)
Translates to: RSSWSCSALHLPSSI*SLARSRAVSSSARR
Trigger: GCGACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCAGCTGCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000492190.5
CDS GCA 90 bp GAGGGTGACTGGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCCTaGTCGCAGCACTTTGTTTCCTCTCAGGCTGCACGGAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: EGDWRPSRVRAAAVS*SQHFVSSQAARSGG
Trigger: CCCGCCGCTCCGTGCAGCCTGAGAGGAAACAAAGTGCTGCGAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS CCA 90 bp CACCCACTCACACACGCACGCGGGAAAATGCAAGACGAGGGTGACTaGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCCTGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: HPLTHARGKMQDEGD*RPSRVRAAAVSCSQ
Trigger: CTGCGAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000460265.5
ENST00000492190.5
CDS TCA 90 bp CACACACCCACTCACACACGCACGCGGGAAAATGCAAGACGAGGGTaGCTGGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: HTPTHTRTRENARRG*LEAQQGSRRRRLLL
Trigger: GAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS TCA 90 bp GAAGCACCCACTCACACACGCACGCGGGAAAATGCAAGACGAGGGTaGCTGGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: EAPTHTRTRENARRG*LEAQQGSRRRRLLL
Trigger: GAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492190.5
CDS GCA 90 bp GACGGCAGGGGGCGAAGCGGGGACCGAAGGCACAAACCGGCGACCTaGGCTCACGTCCAGACGCTGGCGTTTAGAGGAACGGAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: DGRGRSGDRRHKPAT*AHVQTLAFRGTEKH
Trigger: GTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCCTTCGGTCCCCGCTTCGCCCCCTGCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000492190.5
CDS CCA 90 bp TTCGGCGGTTCGGGGGCCGGGCCTGTAAATTTAAAATCTGGCCCTTaGGCAACCGTCAGCTCGGCCCTCCCGGCTGGGCGGTTCCCGGAC +
Preference number: 5 (lower is better)
Translates to: FGGSGAGPVNLKSGP*ATVSSALPAGRFPD
Trigger: GTCCGGGAACCGCCCAGCCGGGAGGGCCGAGCTGACGGTTGCCCAAGGGCCAGATTTTAAATTTACAGGCCCGGCCCCCGAACCGCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS TCA 90 bp AGCATAGCCACTCACACACGCACGCGGGAAAATGCAAGACGAGGGTaGCTGGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SIATHTRTRENARRG*LEAQQGSRRRRLLL
Trigger: GAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGCTATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472034.5
CDS CCA 90 bp GGGACCGAAGGCACAAACCGGCGACCTGCGCTCACGTCCAGACGCTaGCGTTTAGAGGAACGGAGAAGCACCTGGGATGGCGGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GTEGTNRRPALTSRR*RLEERRSTWDGGSS
Trigger: CGAGCTCCCGCCATCCCAGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCCTTCGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS CCA 90 bp GGGACCGAAGGCACAAACCGGCGACCTGCGCTCACGTCCAGACGCTaGCGTTTAGAGGAACGGAGAAGCACCCACTCACACACGCACGCG +
Preference number: 5 (lower is better)
Translates to: GTEGTNRRPALTSRR*RLEERRSTHSHTHA
Trigger: CGCGTGCGTGTGTGAGTGGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCCTTCGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492190.5
CDS GCA 90 bp TTAGAGGAACGGAGAAGCACCCACTCACACACGCACGCGGGAAAATaGAAGACGAGGGTGACTGGAGGCCCAGCAGGGTTCGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LEERRSTHSHTHAGK*KTRVTGGPAGFAPP
Trigger: CGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTGCTTCTCCGTTCCTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492190.5
CDS CCA 90 bp CACGTCCAGACGCTGGCGTTTAGAGGAACGGAGAAGCACCTGGGATaGCGGGAGCTCGATTACAGCACAAAGGGCAAAGGCGCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: HVQTLAFRGTEKHLG*RELDYSTKGKGARG
Trigger: CCCCCGCGCGCCTTTGCCCTTTGTGCTGTAATCGAGCTCCCGCCATCCCAGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS CCA 90 bp GCGCTCACGTCCAGACGCTGGCGTTTAGAGGAACGGAGAAGCACCTaGGATGGCGGGAGCTCGATTACAGCACAAAGGGCAAAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: ALTSRRWRLEERRST*DGGSSITAQRAKAR
Trigger: GCGCGCCTTTGCCCTTTGTGCTGTAATCGAGCTCCCGCCATCCCAGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS-3UTR CAA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTTCCAGGCTGCGCACCTaGTCGATGTACACCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPSRLRT*SMYTAS
Trigger: GCTGGCGGTGTACATCGACAAGGTGCGCAGCCTGGA...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTTGGTCGTGTTCCGCCTaGCACTTGCCCAGCTCGATC +
Preference number: 5 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPWSCSA*HLPSSI
Trigger: GATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCA...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCACGGGAAGAAGGGCTaGGAGACAGCTTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPHGKKG*ETASTS
Trigger: AGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGTG...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACTCCAGGCTGCGCACCTaGTCGATGTACACCGCCAGC +
Preference number: 5 (lower is better)
Translates to: ALHCIQVKITILLYFEEDSRLRT*SMYTAS
Trigger: GCTGGCGGTGTACATCGACAAGGTGCGCAGCCTGGA...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS GCA 90 bp GTCACCAAGTGCAGTAGCAAGAGCTGCATCTTTCGAATTCAGTGCTaGTTCATATTCTCGAAGCTTGATCTGGGCGCCATTAAGATCAGA +
Preference number: 5 (lower is better)
Translates to: VTKCSSKSCIFRIQC*FIFSKLDLGAIKIR
Trigger: TCTGATCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGATGCAGCTCTTGCTACTGCACTTGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000472034.5
ENST00000492190.5
ENST00000504788.5
CDS-3UTR CAA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCATGTTCCGCCTTGCACTaGCCCAGCTCGATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLACSALH*PSSICS
Trigger: GCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACA...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATGGTCGTGTTCCGCCTaGCACTTGCCCAGCTCGATC +
Preference number: 5 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLWSCSA*HLPSSI
Trigger: GATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp GATGGGGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTTATACAGCCTCACTaGGGCATCATGTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: DGAIFKLHQDAQWFIYPPLIQPH*GIMLLS
Trigger: AGAGAGCAACATGATGCCCAAGTGAGGCTGTATAAG...GGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp GGCAATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTAAAGACTGTACTTCTTaGAGCAACCTCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GNLQITPRRTVVYLPSPPKDCTS*SNLLSL
Trigger: CAGGGAGAGGAGGTTGCTCAAAGAAGTACAGTCTTT...AGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AAAACACAACGAATGCATTTTAATAGAGAAACCCTTCCCTCCCTCCACCTCCCTATTGCACAGCTTCTATaGGATGCTCTTGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: KTQRMHFNRETLPSLHLPIAQLL*DALGVP
Trigger: GGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAAT...AGGGAGGTGGAGGGAGGGAAGGGTTTCTCTATTAAAATGCATTCGTTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS GCA 90 bp TTTGTCACCAAGTGCAGTAGCAAGAGCTGCATCTTTCGAATTCAGTaGTGCTTCATATTCTCGAAGCTTGATCTGGGCGCCATTAAGATC +
Preference number: 5 (lower is better)
Translates to: FVTKCSSKSCIFRIQ*CFIFSKLDLGAIKI
Trigger: GATCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGATGCAGCTCTTGCTACTGCACTTGGTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000472034.5
ENST00000492190.5
ENST00000504788.5
CDS-3UTR CAA 90 bp AAATTTGAGGAACCCCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATACCTGCTCGCAGCACTTaGTTTCCTCTCAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: KFEEPLPNSTQLLSSVSIPARST*FPLRLH
Trigger: GTGCAGCCTGAGAGGAAACAAAGTGCTGCGAGCAGG...TATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGGGGTTCCTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp GCTGTTCATAGTCATTCAGCTGTTGCTGCATTTGATCCCTTATTTCCGCCATCTCAGCTGTTGCTGCATTaGATCCCTTATTTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: AVHSHSAVAAFDPLFPPSQLLLH*IPYFRH
Trigger: ATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTG...AGATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTGAATGACTATGAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CAA 90 bp CTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACCTCTTCTATTGGATGCTCTaGGGGTTCCCTGCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LLFFRYGCFKDCTSLSNLFYWML*GFPAGG
Trigger: TCCACCAGCAGGGAACCCCAAGAGCATCCAATAGAA...GAGGTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CAA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAACCTGCTCGCAGCACTTaGTTTCCTCTCAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: KALHCIQVKITILLYFEEPARST*FPLRLH
Trigger: GTGCAGCCTGAGAGGAAACAAAGTGCTGCGAGCAGG...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATGTACTCATACTCAATTaGACGCCCAGAATCCACCTC +
Preference number: 5 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHVLILN*TPRIHL
Trigger: GAGGTGGATTCTGGGCGTCAAATTGAGTATGAGTAC...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATCTTATACAGCCTCACTaGGGCATCATGTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHLIQPH*GIMLLS
Trigger: AGAGAGCAACATGATGCCCAAGTGAGGCTGTATAAG...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp GCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAAGACTTTAAAATCTGGCCCTaGGGCAACCGTCAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: ALHCIQVKITILLYFEEDFKIWP*GNRQLG
Trigger: GCCGAGCTGACGGTTGCCCAAGGGCCAGATTTTAAA...GTCTTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CAA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTCACGGGAAGAAGGGCTaGGAGACAGCTTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: SEKALHCIQVKITILLYFHGKKG*ETASTS
Trigger: AGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGTG...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACTCATATTCTCGAAGCTaGATCTGGGCGCCATTAAGA +
Preference number: 5 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNSYSRS*IWAPLR
Trigger: TCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGA...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CAA 90 bp AATCTTCAAATTACACCAAGACGCACAGTGGTTTATTTACCCTCCCCTCCTCATTCTTCATACATGCTTTaGCGAAACTCCAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: NLQITPRRTVVYLPSPPHSSYML*RNSKSS
Trigger: TGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAGA...ATGAGGAGGGGAGGGTAAATAAACCACTGTGCGTCTTGGTGTAATTTGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTCACTTGGGCATCATGTaGCTCTCTCATCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGHLGIM*LSHLMK
Trigger: CTTCATGAGATGAGAGAGCAACATGATGCCCAAGTG...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTACATGGTCAGCTGTTGCTGCATTaGATCCCTTATTTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: SNHKTKFCGIHHPECLHGQLLLH*IPYFRH
Trigger: ATGGCGGAAATAAGGGATCAAATGCAGCAACAGCTG...ACCATGTAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCATACGTACACTACGACTaGAGGATGCTCGGGATACTG +
Preference number: 5 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLAYVHYD*RMLGIL
Trigger: CAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTA...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCACCAGCCTCCCATTGGTaGATCCTGTTCAGAAGTGTT +
Preference number: 5 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLAPASHW*ILFRSV
Trigger: AACACTTCTGAACAGGATCAACCAATGGGAGGCTGG...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATTCTATTGGATGCTCTaGGGGTTCCCTGCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: KALHCIQVKITILLYFEEFYWML*GFPAGG
Trigger: TCCACCAGCAGGGAACCCCAAGAGCATCCAATAGAA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTATCTGCTAACTGTTTTTaGGCTGCAGCTAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLSANCF*AAAKEA
Trigger: AGCCTCCTTAGCTGCAGCCAAAAAACAGTTAGCAGA...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTCATCTCATGAAGGGCTaGCGCCAGCTTGTACTCATA +
Preference number: 5 (lower is better)
Translates to: SEKALHCIQVKITILLYFHLMKG*RQLVLI
Trigger: TATGAGTACAAGCTGGCGCAAGCCCTTCATGAGATG...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGCATCTCATGAAGGGCTaGCGCCAGCTTGTACTCATA +
Preference number: 5 (lower is better)
Translates to: NLREEVTIKPSFVESIIQHLMKG*RQLVLI
Trigger: TATGAGTACAAGCTGGCGCAAGCCCTTCATGAGATG...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAATACGTACACTACGACTaGAGGATGCTCGGGATACTG +
Preference number: 5 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQYVHYD*RMLGIL
Trigger: CAGTATCCCGAGCATCCTCAAGTCGTAGTGTACGTA...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp TCTGAGAAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTCCAGCCTCCCATTGGTaGATCCTGTTCAGAAGTGTT +
Preference number: 5 (lower is better)
Translates to: SEKALHCIQVKITILLYFPASHW*ILFRSV
Trigger: AACACTTCTGAACAGGATCAACCAATGGGAGGCTGG...AAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTTCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAATTGCACAGCTTCTATaGGATGCTCTTGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQIAQLL*DALGVP
Trigger: GGGAACCCCAAGAGCATCCAATAGAAGCTGTGCAAT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATCTGCTAACTGTTTTTaGGCTGCAGCTAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KALHCIQVKITILLYFEESANCF*AAAKEA
Trigger: AGCCTCCTTAGCTGCAGCCAAAAAACAGTTAGCAGA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAACACTTGGGCATCATGTaGCTCTCTCATCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: KALHCIQVKITILLYFEEHLGIM*LSHLMK
Trigger: CTTCATGAGATGAGAGAGCAACATGATGCCCAAGTG...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCTTCCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCATCTTCCCTGGCACTGTaGACAGTAGAAGTATTCATC +
Preference number: 5 (lower is better)
Translates to: PSEQYTVIKFSVNNSHLASSLAL*TVEVFI
Trigger: GATGAATACTTCTACTGTCAACAGTGCCAGGGAAGA...TGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAGTGCTTAAGCATGCGACGAGAGTaGTCTTTTTCTTTAGCAAGC +
Preference number: 5 (lower is better)
Translates to: RRSNHKTKFCGIHHPECLSMRRE*SFSLAS
Trigger: GCTTGCTAAAGAAAAAGACAACTCTCGTCGCATGCT...TAAGCACTCTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CTCCTCCTCTTCTTCAGGTATGGTTGTTTTAAAGACTGTACTTCTTTGAGCAACATAGTCATTCAGCTGTaGCTGCATTTGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: LLLFFRYGCFKDCTSLSNIVIQL*LHLIPY
Trigger: ATAAGGGATCAAATGCAGCAACAGCTGAATGACTAT...GTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS-3UTR CAA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGAAAGACTGTACTTCTTaGAGCAACCTCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: NLREEVTIKPSFVESIIQKDCTS*SNLLSL
Trigger: CAGGGAGAGGAGGTTGCTCAAAGAAGTACAGTCTTT...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AATCTAAGAGAAGAAGTAACCATAAAACCAAGTTTTGTGGAATCCATCATCCAGTCATATTCTCGAAGCTaGATCTGGGCGCCATTAAGA +
Preference number: 5 (lower is better)
Translates to: NLREEVTIKPSFVESIIQSYSRS*IWAPLR
Trigger: TCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGA...CTGGATGATGGATTCCACAAAACTTGGTTTTATGGTTACTTCTTCTCTTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAATCTTCCCTGGCACTGTaGACAGTAGAAGTATTCATC +
Preference number: 5 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQSSLAL*TVEVFI
Trigger: GATGAATACTTCTACTGTCAACAGTGCCAGGGAAGA...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp AAGGCTCTGCACTGTATACAGGTAAAGATTACCATACTTCTTTATTTTGAGGAATCTTCATACATGCTTTaGCGAAACTCCAAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KALHCIQVKITILLYFEESSYML*RNSKSS
Trigger: TGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAGA...TTCCTCAAAATAAAGAAGTATGGTAATCTTTACCTGTATACAGTGCAGAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS-3UTR CAA 90 bp CCGAACAGTACACAGTTATTAAGTTCAGTGTCAATAATTCACATCTTGCAACAAATAGTCATTCAGCTGTaGCTGCATTTGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: PNSTQLLSSVSIIHILQQIVIQL*LHLIPY
Trigger: ATAAGGGATCAAATGCAGCAACAGCTGAATGACTAT...TTGTTGCAAGATGTGAATTATTGACACTGAACTTAATAACTGTGTACTGTTCGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS CAA 72 bp GGGTTCGCGCCGCCGCCGTCTCCTGCTCGCAGCACTTaGTTTCCTCTCAGGCTGCACGGAGCGGCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: GFAPPPSPARST*FPLRLHGAAGG
Trigger: CCCGCCCGCCGCTCCGTGCAGCCTGAGAGGAAACAAAGTGCTGCGAGCAGGAGACGGCGGCGGCGCGAACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS CAA 90 bp AGCTGGTCGTGTTCCGCCTTGCACTTGCCCAGCTCGATCTGCAGCTaGGCGCGCTCGCGGGCCGTGTCGTCGAGCGCGCGTCGCGCGTCG +
Preference number: 6 (lower is better)
Translates to: SWSCSALHLPSSICS*ARSRAVSSSARRAS
Trigger: CGACGCGCGACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000492190.5
CDS CCA 72 bp GTTCCGCCTTGCACTTGCCCAGCTCGATCTGCAGCTTaGCGCGCTCGCGGGCCGTGTCGTCGAGCGCGCGTC +
Preference number: 6 (lower is better)
Translates to: VPPCTCPARSAA*RARGPCRRARV
Trigger: GACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000492190.5
CDS CAA 72 bp TGTTCCGCCTTGCACTTGCCCAGCTCGATCTGCAGCTaGGCGCGCTCGCGGGCCGTGTCGTCGAGCGCGCGT +
Preference number: 6 (lower is better)
Translates to: CSALHLPSSICS*ARSRAVSSSAR
Trigger: ACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000492190.5
CDS GCA 72 bp TGGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCCTaGTCGCAGCACTTTGTTTCCTCTCAGGCTGCACGG +
Preference number: 6 (lower is better)
Translates to: WRPSRVRAAAVS*SQHFVSSQAAR
Trigger: CCGTGCAGCCTGAGAGGAAACAAAGTGCTGCGAGCAGGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261366.10
ENST00000460265.5
CDS GCA 72 bp TGGTCGTGTTCCGCCTTGCACTTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGGGCCGTGTCGTCGAGC +
Preference number: 6 (lower is better)
Translates to: WSCSALHLPSSI*SLARSRAVSSS
Trigger: GCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000492190.5
CDS CCA 72 bp ACACACGCACGCGGGAAAATGCAAGACGAGGGTGACTaGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: THARGKMQDEGD*RPSRVRAAAVS
Trigger: GGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261366.10
ENST00000460265.5
ENST00000472034.5
ENST00000492190.5
CDS CCA 72 bp AGACACGCACGCGGGAAAATGCAAGACGAGGGTGACTaGAGGCCCAGCAGGGTTCGCGCCGCCGCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: RHARGKMQDEGD*RPSRVRAAAVS
Trigger: GGAGACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504788.5
CDS CAA 90 bp CTTCGGCGGTTCGGGGGCCGGGCCTGTAAATTTAAAATCTGGCCCTaGGGCAACCGTCAGCTCGGCCCTCCCGGCTGGGCGGTTCCCGGA +
Preference number: 6 (lower is better)
Translates to: LRRFGGRACKFKIWP*GNRQLGPPGWAVPG
Trigger: TCCGGGAACCGCCCAGCCGGGAGGGCCGAGCTGACGGTTGCCCAAGGGCCAGATTTTAAATTTACAGGCCCGGCCCCCGAACCGCCGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS TCA 72 bp ACTCACACACGCACGCGGGAAAATGCAAGACGAGGGTaGCTGGAGGCCCAGCAGGGTTCGCGCCGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: THTRTRENARRG*LEAQQGSRRRR
Trigger: ACGGCGGCGGCGCGAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261366.10
ENST00000460265.5
ENST00000472034.5
ENST00000492190.5
CDS GCA 72 bp GGGCGAAGCGGGGACCGAAGGCACAAACCGGCGACCTaGGCTCACGTCCAGACGCTGGCGTTTAGAGGAACG +
Preference number: 6 (lower is better)
Translates to: GRSGDRRHKPAT*AHVQTLAFRGT
Trigger: CGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCCTTCGGTCCCCGCTTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000492190.5
CDS CCA 72 bp TCGGGGGCCGGGCCTGTAAATTTAAAATCTGGCCCTTaGGCAACCGTCAGCTCGGCCCTCCCGGCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: SGAGPVNLKSGP*ATVSSALPAGR
Trigger: CCGCCCAGCCGGGAGGGCCGAGCTGACGGTTGCCCAAGGGCCAGATTTTAAATTTACAGGCCCGGCCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS CAA 72 bp TTCGGGGGCCGGGCCTGTAAATTTAAAATCTGGCCCTaGGGCAACCGTCAGCTCGGCCCTCCCGGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: FGGRACKFKIWP*GNRQLGPPGWA
Trigger: CGCCCAGCCGGGAGGGCCGAGCTGACGGTTGCCCAAGGGCCAGATTTTAAATTTACAGGCCCGGCCCCCGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS CCA 72 bp GGCACAAACCGGCGACCTGCGCTCACGTCCAGACGCTaGCGTTTAGAGGAACGGAGAAGCACCTGGGATGGC +
Preference number: 6 (lower is better)
Translates to: GTNRRPALTSRR*RLEERRSTWDG
Trigger: GCCATCCCAGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS GCA 72 bp CGGAGAAGCACCCACTCACACACGCACGCGGGAAAATaGAAGACGAGGGTGACTGGAGGCCCAGCAGGGTTC +
Preference number: 6 (lower is better)
Translates to: RRSTHSHTHAGK*KTRVTGGPAGF
Trigger: GAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTGCTTCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492190.5
CDS CCA 72 bp GGCACAAACCGGCGACCTGCGCTCACGTCCAGACGCTaGCGTTTAGAGGAACGGAGAAGCACCCACTCACAC +
Preference number: 6 (lower is better)
Translates to: GTNRRPALTSRR*RLEERRSTHSH
Trigger: GTGTGAGTGGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492190.5
CDS GCA 72 bp AACACACACACCCACTCACACACGCACGCGGGAAAATaGAAGACGAGGGTGACTGGAGGCCCAGCAGGGTTC +
Preference number: 6 (lower is better)
Translates to: NTHTHSHTHAGK*KTRVTGGPAGF
Trigger: GAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTGTGAGTGGGTGTGTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS CCA 72 bp ACGCTGGCGTTTAGAGGAACGGAGAAGCACCTGGGATaGCGGGAGCTCGATTACAGCACAAAGGGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: TLAFRGTEKHLG*RELDYSTKGKG
Trigger: GCCTTTGCCCTTTGTGCTGTAATCGAGCTCCCGCCATCCCAGGTGCTTCTCCGTTCCTCTAAACGCCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS CCA 72 bp TCCAGACGCTGGCGTTTAGAGGAACGGAGAAGCACCTaGGATGGCGGGAGCTCGATTACAGCACAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SRRWRLEERRST*DGGSSITAQRA
Trigger: TGCCCTTTGTGCTGTAATCGAGCTCCCGCCATCCCAGGTGCTTCTCCGTTCCTCTAAACGCCAGCGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
CDS GCA 72 bp AGATTCCTTCTTAGCATAGACACGCACGCGGGAAAATaGAAGACGAGGGTGACTGGAGGCCCAGCAGGGTTC +
Preference number: 6 (lower is better)
Translates to: RFLLSIDTHAGK*KTRVTGGPAGF
Trigger: GAACCCTGCTGGGCCTCCAGTCACCCTCGTCTTGCATTTTCCCGCGTGCGTGTCTATGCTAAGAAGGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504788.5
CDS CAA 72 bp ATGAAGGGCTTGCGCCAGCTTGTACTCATACTCAATTaGACGCCCAGAATCCACCTCTACCAAGCGCGTTTC +
Preference number: 6 (lower is better)
Translates to: MKGLRQLVLILN*TPRIHLYQARF
Trigger: GAAACGCGCTTGGTAGAGGTGGATTCTGGGCGTCAAATTGAGTATGAGTACAAGCTGGCGCAAGCCCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000472034.5
ENST00000504788.5
CDS CAA 90 bp TCTCATCTCATGAAGGGCTTGCGCCAGCTTGTACTCATACTCAATTaGACGCCCAGAATCCACCTCTACCAAGCGCGTTTCATGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SHLMKGLRQLVLILN*TPRIHLYQARFMLP
Trigger: AGGAAGCATGAAACGCGCTTGGTAGAGGTGGATTCTGGGCGTCAAATTGAGTATGAGTACAAGCTGGCGCAAGCCCTTCATGAGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000472034.5
ENST00000504788.5
CDS TCA 72 bp AGCCTCACTTGGGCATCATGTTGCTCTCTCATCTCATaGAGGGCTTGCGCCAGCTTGTACTCATACTCAATT +
Preference number: 6 (lower is better)
Translates to: SLTWASCCSLIS*RACASLYSYSI
Trigger: AATTGAGTATGAGTACAAGCTGGCGCAAGCCCTTCATGAGATGAGAGAGCAACATGATGCCCAAGTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000472034.5
ENST00000504788.5
CDS TCA 72 bp AAGGGTGAGAGGCAAAAAGTGGACCATAAGGTAGGGTaGCCCTTAAGTTCCTTACCTCTCTTCTTCGCCTTC +
Preference number: 6 (lower is better)
Translates to: KGERQKVDHKVG*PLSSLPLFFAF
Trigger: GAAGGCGAAGAAGAGAGGTAAGGAACTTAAGGGTCACCCTACCTTATGGTCCACTTTTTGCCTCTCACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395354.1
CDS GCA 72 bp AAGTGCAGTAGCAAGAGCTGCATCTTTCGAATTCAGTaGTGCTTCATATTCTCGAAGCTTGATCTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: KCSSKSCIFRIQ*CFIFSKLDLGA
Trigger: GGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGATGCAGCTCTTGCTACTGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000472034.5
ENST00000492190.5
ENST00000504788.5
CDS CAA 72 bp CTCATGCGGCTTTCCATCAGTTCTTCCCTGGCACTGTaGACAGTAGAAGTATTCATCTCTGATGACAGTCTG +
Preference number: 6 (lower is better)
Translates to: LMRLSISSSLAL*TVEVFISDDSL
Trigger: CAGACTGTCATCAGAGATGAATACTTCTACTGTCAACAGTGCCAGGGAAGAACTGATGGAAAGCCGCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000472034.5
ENST00000494185.1
ENST00000504788.5
CDS CCA 72 bp CTCAGCAACAAACACTCTTTCTGTAGATTAGAAAGCTaGGATGAAAGGCTCTCAATTCTCATGCGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LSNKHSFCRLES*DERLSILMRLS
Trigger: GGAAAGCCGCATGAGAATTGAGAGCCTTTCATCCCAGCTTTCTAATCTACAGAAAGAGTGTTTGTTGCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5
CDS CCA 72 bp AAACATGCTCTAGACTCTTTCTGTAGATTAGAAAGCTaGGATGAAAGGCTCTCAATTCTCATGCGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: KHALDSFCRLES*DERLSILMRLS
Trigger: GGAAAGCCGCATGAGAATTGAGAGCCTTTCATCCCAGCTTTCTAATCTACAGAAAGAGTCTAGAGCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000472034.5
ENST00000494185.1
ENST00000504788.5
CDS CAA 72 bp TCTTTCGAATTCAGTGCTGCTTCATATTCTCGAAGCTaGATCTGGGCGCCATTAAGATCAGATTCCTTCTTA +
Preference number: 6 (lower is better)
Translates to: SFEFSAASYSRS*IWAPLRSDSFL
Trigger: TAAGAAGGAATCTGATCTTAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261366.10
ENST00000395354.1
ENST00000460265.5
ENST00000463908.2
ENST00000472034.5
ENST00000492190.5
ENST00000504788.5
CDS TCA 72 bp TCTTATGGCCTAATAGGCAGCATGATGAAACTGATATaGCTCAGCAACAAACACTCTTTCTGTAGATTAGAA +
Preference number: 6 (lower is better)
Translates to: SYGLIGSMMKLI*LSNKHSFCRLE
Trigger: TTCTAATCTACAGAAAGAGTGTTTGTTGCTGAGTCATATCAGTTTCATCATGCTGCCTATTAGGCCATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460265.5