RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100258

Ensembl transcript IDs: ENST00000216080.5, ENST00000474879.7, ENST00000504717.1, ENST00000505981.5, ENST00000507607.1, ENST00000514938.1

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGCACTCCCGGCGACCTaGCCCTCTCAGGACGTGCAG +
Preference number: 2 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGALPAT*PSQDVQ
Trigger: CTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGCACTCCCGGCGACCTaGCCCTCTCAGGACGTGCAG +
Preference number: 2 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWALPAT*PSQDVQ
Trigger: CTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCGTGGGGGTGGGGCCTaGAGCCCTCAATGCAGCACC +
Preference number: 2 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLRGGGA*SPQCST
Trigger: GGTGCTGCATTGAGGGCTCCAGGCCCCACCCCCACG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCGTGGGGGTGGGGCCTaGAGCCCTCAATGCAGCACC +
Preference number: 2 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWRGGGA*SPQCST
Trigger: GGTGCTGCATTGAGGGCTCCAGGCCCCACCCCCACG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR GCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGCTCAATGCAGCACCCTaGAAACCCCAGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: VVFSSWANHRGNSGSPGELNAAP*KPQGQP
Trigger: GGGCTGCCCCTGGGGTTTGCAGGGTGCTGCATTGAG...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGCTAAGGCACAGTGGCTaGGTCCTGTCCTGCCGGAGG +
Preference number: 2 (lower is better)
Translates to: VVFSSWANHRGNSGSPGELRHSG*VLSCRR
Trigger: CCTCCGGCAGGACAGGACCCAGCCACTGTGCCTTAG...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCTAAGGCACAGTGGCTaGGTCCTGTCCTGCCGGAGG +
Preference number: 2 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRLRHSG*VLSCRR
Trigger: CCTCCGGCAGGACAGGACCCAGCCACTGTGCCTTAG...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGTCAGCTAAGGCACAGTaGCTGGGTCCTGTCCTGCCG +
Preference number: 2 (lower is better)
Translates to: VVFSSWANHRGNSGSPGESAKAQ*LGPVLP
Trigger: CGGCAGGACAGGACCCAGCCACTGTGCCTTAGCTGA...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGTCGTGTTTTCCTCCTaGGCCAATCACAGAGGCAAT +
Preference number: 2 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWVVFSS*ANHRGN
Trigger: ATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CAA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGGCAGGGGAAGGGTCTaGAGCTTGGTCGTGTTTTCC +
Preference number: 3 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWGRGRV*SLVVFS
Trigger: GGAAAACACGACCAAGCTCAAGACCCTTCCCCTGCC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CAA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCGGAAGGGTCTTGAGCTaGGTCGTGTTTTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLGRVLS*VVFSSW
Trigger: CCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCC...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR-3UTR CAA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGGAAGGGTCTTGAGCTaGGTCGTGTTTTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGGRVLS*VVFSSW
Trigger: CCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCC...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
3UTR CCA 72 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTaGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: RGRVLSLVVFSS*ANHRGNSGSPG
Trigger: CCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGGGGTCTCCCACAGCTaGTGCCAGCGCCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSGVSHS*CQRPLP
Trigger: GGGCAAGGGGCGCTGGCAGCAGCTGTGGGAGACCCC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCCTCCCCGCTGACTGGTaGCAGCGGGGAGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSLPADW*QRGGPE
Trigger: CTCCGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAG...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTCCAGGCGTGGCTGGTaGGGCACCACAACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSSRRGW*GTTTGG
Trigger: GCCCCCGGTTGTGGTGCCCCACCAGCCACGCCTGGA...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGGGCCAGGGTGCTGTTaGCGCTGCGGGTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSGPGCC*RCGCEV
Trigger: CACCTCGCACCCGCAGCGCCAACAGCACCCTGGCCC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGCCCACCTGGCAGGCTaGCAGGTAGGCGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSAHLAG*QVGGPK
Trigger: CTTTGGGCCGCCTACCTGTCAGCCTGCCAGGTGGGC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCCGCCACCACTGGCCCTaGTCCCCAGGCTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSRHHWP*SPGWEN
Trigger: GTTCTCCCAGCCTGGGGAGCAGGGCCAGTGGTGGCG...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCAGCCAGACCGGCAGGTaGTGTGCGAACCAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSSQTGR*CANQAA
Trigger: CGCCGCCTGGTTCGCACACCACCTGCCGGTCTGGCT...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCAGGTGGCCACCACGCTaGGCTTGTGCAGCCAGACCG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSRWPPR*ACAARP
Trigger: CGGTCTGGCTGCACAAGCTCAGCGTGGTGGCCACCT...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGCTGCCAGCGCCCCTTaGCCTGAGGCCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTAASAP*PEAAAS
Trigger: GGACGCTGCGGCCTCAGGGCAAGGGGCGCTGGCAGC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGGGTGCTGTTGGCGCTaGGGGTGCGAGGTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSGCCWR*GCEVGF
Trigger: AAAGCCCACCTCGCACCCGCAGCGCCAACAGCACCC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGGGCATGTCATaGCCAGGCCCTGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSWEGMS*PGPGQP
Trigger: GGGCTGTCCAGGGCCTGGCCATGACATGCCCTCCCA...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216080.5
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGAGTGGATGGTGCGCTaGTGCCAGTCAACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSEWMVR*CQSTSR
Trigger: CCTGGAGGTTGACTGGCAGCAGCGCACCATCCACTC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGACAGGGTGGCGCAGTaGGCTCAGCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTDRVAQ*AQQQGS
Trigger: GGAGCCCTGCTGCTGAGCCCACTGCGCCACCCTGTC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAAGCCAGCCCCGCACCTaGGTCCACCTCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTSQPRT*VHLHRA
Trigger: TGCCCTGTGGAGGTGGACCCAGGTGCGGGGCTGGCT...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGACAAGGCGGATCACTaGCTCCTTGCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSDKADH*LLALQQ
Trigger: CTGCTGCAGGGCAAGGAGCCAGTGATCCGCCTTGTC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACACGTGGGGGTGGGGCCTaGAGCCCTCAATGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTRGGGA*SPQCST
Trigger: GGTGCTGCATTGAGGGCTCCAGGCCCCACCCCCACG...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAAGCGCAGGCGTCGAATaGGGGCGAAGAACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTSAGVE*GRRTGA
Trigger: CGCCCCTGTTCTTCGCCCCCATTCGACGCCTGCGCT...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACACCTTGGGCCAGGAGGTaGCCGTCTTCTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTPWARR*PSSCGC
Trigger: GCAGCCGCAAGAAGACGGCCACCTCCTGGCCCAAGG...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGGGCTCGGACGTAGGTaGGCGGCTGCTTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTGLGRR*AAACGR
Trigger: CCTTCCACAAGCAGCCGCCCACCTACGTCCGAGCCC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGGGGCCATACAGGCCTaGGATTTGCGTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSGAIQA*DLRVEG
Trigger: TCCCTCTACACGCAAATCCCAGGCCTGTATGGCCCC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474879.7
CDS-3UTR GCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGGTGGCCGTCGTAACTaGCCTCCAGCACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTGGRRN*PPAPPQ
Trigger: CTGAGGTGGTGCTGGAGGGCAGTTACGACGGCCACC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAACTGGCTCCTTGCCCTaGAGCAGGCGCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTTGSLP*SRRKTR
Trigger: CCTGGTCTTGCGCCTGCTGCAGGGCAAGGAGCCAGT...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTCCTGTAGTCCAAACTaGCTGAGCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSSCSPN*LSSVSS
Trigger: GCTGGAGACGCTGCTCAGGCAGTTTGGACTACAGGA...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACATCAGCAGCCAGGTGCTaGTCGTCCAGCAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTSAARC*SSSSAV
Trigger: CACTGCGCTGCTGGACGACCAGCACCTGGCTGCTGA...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGTAGTCCAAACTGCCTaGGCAGCGTCTCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTVVQTA*AASPAW
Trigger: CCACGCTGGAGACGCTGCTCAGGCAGTTTGGACTAC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACATCCTTGCAGGTAGGATaGCCTCGGGGCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTSLQVG*PRGHTG
Trigger: GCCTGTATGGCCCCGAGGGCATCCTACCTGCAAGGA...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCTGCCAGCGCCCCTTaGCCTGAGGCCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAAASAP*PEAAAS
Trigger: GGACGCTGCGGCCTCAGGGCAAGGGGCGCTGGCAGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCCAAAGTAGTGCACAGTaGCATAGGCCAGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSQSSAQ*HRPEAR
Trigger: ACGGGCTTCTGGCCTATGGCACTGTGCACTACTTTG...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACATGGATGGTGCGCTGCTaGCAGTCAACCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTWMVRC*QSTSRP
Trigger: TGGCCTGGAGGTTGACTGGCAGCAGCGCACCATCCA...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGACGGCCGCCACGCCCTaGAGGAAGAGCTGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGETAATP*RKSCRG
Trigger: CCCGCGGCAGCTCTTCCTCCAGGGCGTGGCGGCCGT...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGACGGCCGCCACGCCCTaGAGGAAGAGCTGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWTAATP*RKSCRG
Trigger: CCCGCGGCAGCTCTTCCTCCAGGGCGTGGCGGCCGT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCGGGGCCTCCTTGCGGTaGGAGGCTGGCCTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLGASLR*EAGLSG
Trigger: CCCGCTGAGGCCAGCCTCCCACCGCAAGGAGGCCCC...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGGGCCTCCTTGCGGTaGGAGGCTGGCCTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEGASLR*EAGLSG
Trigger: CCCGCTGAGGCCAGCCTCCCACCGCAAGGAGGCCCC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGTGGCGCCGCCACCACTaGCCCTGCTCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEWRRHH*PCSPGW
Trigger: CCAGCCTGGGGAGCAGGGCCAGTGGTGGCGGCGCCA...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACACCCCAGGGACACGGATaGGAAGAACTCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTPQGHG*EELLHP
Trigger: TGGGTGGAGGAGTTCTTCCCATCCGTGTCCCTGGGG...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCTGCGCTTCTCCCCGCTaGCTGGTGCCAGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLCASPR*LVPAGR
Trigger: CCTCCCCGCTGGCACCAGTCAGCGGGGAGAAGCGCA...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTGCGCTTCTCCCCGCTaGCTGGTGCCAGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESACASPR*LVPAGR
Trigger: CCTCCCCGCTGGCACCAGTCAGCGGGGAGAAGCGCA...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCGACCGGCAGGTGGTGTaGGAACCAGGCGGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLDRQVV*EPGGGR
Trigger: ACGCCCGCCGCCTGGTTCGCACACCACCTGCCGGTC...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGACCGGCAGGTGGTGTaGGAACCAGGCGGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEDRQVV*EPGGGR
Trigger: ACGCCCGCCGCCTGGTTCGCACACCACCTGCCGGTC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCTCCCCGCTGACTGGTaGCAGCGGGGAGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGLPADW*QRGGPE
Trigger: CTCCGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGCAGGGGTTGGGGGCTaGGGTGGCCTGTTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGAGVGG*GGLFGG
Trigger: GCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCAGGGGTTGGGGGCTaGGGTGGCCTGTTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAAGVGG*GGLFGG
Trigger: GCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCAGCAGCGACAGGGTaGCCAGCAGGGCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAAAATG*PAGPWA
Trigger: GGCCCAAGGCCCTGCTGGCCACCCTGTCGCTGCTGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGCAGCAGCGACAGGGTaGCCAGCAGGGCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWAAATG*PAGPWA
Trigger: GGCCCAAGGCCCTGCTGGCCACCCTGTCGCTGCTGC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCACCAAACAGGCGGTaGGCCCCGGTCCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAAPNRR*APVQRR
Trigger: GCGCCTCTGGACCGGGGCCCACCGCCTGTTTGGTGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGCACCAAACAGGCGGTaGGCCCCGGTCCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGAPNRR*APVQRR
Trigger: GCGCCTCTGGACCGGGGCCCACCGCCTGTTTGGTGC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCTCCAGGCGTGGCTGGTaGGGCACCACAACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGSRRGW*GTTTGG
Trigger: GCCCCCGGTTGTGGTGCCCCACCAGCCACGCCTGGA...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCAGCGTCTCCAGCGTaGGGTCCCCCAGGGACACGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEAASPA*GPPGTR
Trigger: CCGTGTCCCTGGGGGACCCCACGCTGGAGACGCTGC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCAGCGTCTCCAGCGTaGGGTCCCCCAGGGACACGG +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAAASPA*GPPGTR
Trigger: CCGTGTCCCTGGGGGACCCCACGCTGGAGACGCTGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGGGCCAGGGTGCTGTTaGCGCTGCGGGTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRGPGCC*RCGCEV
Trigger: CACCTCGCACCCGCAGCGCCAACAGCACCCTGGCCC...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGCCCACCTGGCAGGCTaGCAGGTAGGCGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWAHLAG*QVGGPK
Trigger: CTTTGGGCCGCCTACCTGTCAGCCTGCCAGGTGGGC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCGCCACCACTGGCCCTaGTCCCCAGGCTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRRHHWP*SPGWEN
Trigger: GTTCTCCCAGCCTGGGGAGCAGGGCCAGTGGTGGCG...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCAGCAGCTCCAGGCCCTaGGCCGTGTCCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESASSSRP*AVSSPS
Trigger: ACTGGGGCTGGACACGGCCCAGGGCCTGGAGCTGCT...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGAGCAGCTCCAGGCCCTaGGCCGTGTCCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRSSSRP*AVSSPS
Trigger: ACTGGGGCTGGACACGGCCCAGGGCCTGGAGCTGCT...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGACAGGGTGGCGCAGTaGGCTCAGCAGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRDRVAQ*AQQQGS
Trigger: GGAGCCCTGCTGCTGAGCCCACTGCGCCACCCTGTC...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGAGCCAGACCGGCAGGTaGTGTGCGAACCAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRSQTGR*CANQAA
Trigger: CGCCGCCTGGTTCGCACACCACCTGCCGGTCTGGCT...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGAGCCAGCCCCGCACCTaGGTCCACCTCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWSQPRT*VHLHRA
Trigger: TGCCCTGTGGAGGTGGACCCAGGTGCGGGGCTGGCT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCAGTCCAGGCGTGGCTaGTGGGGCACCACAACCGGG +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLQSRRG*WGTTTG
Trigger: CCCGGTTGTGGTGCCCCACCAGCCACGCCTGGACTG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCAGTCCAGGCGTGGCTaGTGGGGCACCACAACCGGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWQSRRG*WGTTTG
Trigger: CCCGGTTGTGGTGCCCCACCAGCCACGCCTGGACTG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCTTCTCCCCGCTGACTaGTGCCAGCGGGGAGGACCG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWLLPAD*CQRGGP
Trigger: CGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAGAAG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGACTTCTCCCCGCTGACTaGTGCCAGCGGGGAGGACCG +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGLLPAD*CQRGGP
Trigger: CGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAGAAG...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCACTCCCGGCGACCTaGCCCTCTCAGGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEALPAT*PSQDVQ
Trigger: CTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGCACTCCCGGCGACCTaGCCCTCTCAGGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGALPAT*PSQDVQ
Trigger: CTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGC...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACACCAGCGTCATCAGGTTaGAGAAGTTGTAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTPASSG*RSCSCR
Trigger: CCGGCAACTACAACTTCTTCAACCTGATGACGCTGG...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGGCTCAGCAGCCAGGTaGTGGTCGTCCAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRGSAAR*WSSSSA
Trigger: TGCGCTGCTGGACGACCAGCACCTGGCTGCTGAGCC...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCCGTCTTCTTGCGGCTaGCGTGGCCAGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWPSSCG*RGQAQQ
Trigger: CTGCTGAGCCTGGCCACGGCAGCCGCAAGAAGACGG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCCGTCTTCTTGCGGCTaGCGTGGCCAGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGPSSCG*RGQAQQ
Trigger: CTGCTGAGCCTGGCCACGGCAGCCGCAAGAAGACGG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGAGGTGGCCGTCTTCTTaGGGCTGCCGTGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWRWPSS*GCRGQA
Trigger: AGCCTGGCCACGGCAGCCGCAAGAAGACGGCCACCT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGAGGTGGCCGTCTTCTTaGGGCTGCCGTGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGERWPSS*GCRGQA
Trigger: AGCCTGGCCACGGCAGCCGCAAGAAGACGGCCACCT...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGGGTGCTGTTGGCGCTaGGGGTGCGAGGTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGGCCWR*GCEVGF
Trigger: AAAGCCCACCTCGCACCCGCAGCGCCAACAGCACCC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAGCGCAGGCGTCGAATaGGGGCGAAGAACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGSAGVE*GRRTGA
Trigger: CGCCCCTGTTCTTCGCCCCCATTCGACGCCTGCGCT...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGTTCTTGCGGCTGCCGTaGCCAGGCTCAGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRFLRLP*PGSAAR
Trigger: CCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAA...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGTTCTTGCGGCTGCCGTaGCCAGGCTCAGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWFLRLP*PGSAAR
Trigger: CCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAA...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCCTTGGGCCAGGAGGTaGCCGTCTTCTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRPWARR*PSSCGC
Trigger: GCAGCCGCAAGAAGACGGCCACCTCCTGGCCCAAGG...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCTGCCAGTCCAGGCGTaGCTGGTGGGGCACCACAAC +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWLPVQA*LVGHHN
Trigger: GTTGTGGTGCCCCACCAGCCACGCCTGGACTGGCAG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCCTGCCAGTCCAGGCGTaGCTGGTGGGGCACCACAAC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESALPVQA*LVGHHN
Trigger: GTTGTGGTGCCCCACCAGCCACGCCTGGACTGGCAG...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCGGGCTGTGCGTGTGTaGGCCCAGGGCTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLRAVRV*AQGCKP
Trigger: TGGTTTGCAGCCCTGGGCCCACACACGCACAGCCCG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGACGGGCTGTGCGTGTGTaGGCCCAGGGCTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGRAVRV*AQGCKP
Trigger: TGGTTTGCAGCCCTGGGCCCACACACGCACAGCCCG...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACATGTGGAAGGGATACCTaGCCACTTGGCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTCGRDT*PLGSGQ
Trigger: TTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACA...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGGCTCGGACGTAGGTaGGCGGCTGCTTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEGLGRR*AAACGR
Trigger: CCTTCCACAAGCAGCCGCCCACCTACGTCCGAGCCC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACACTCAGGACGTGCAGCTaGGAGAACACAGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTLRTCS*ENTATS
Trigger: AGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAG...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCGCCTGAGGCGAACATaGGGCGGAACAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRRLRRT*GGTAAI
Trigger: GATGGCTGCTGTTCCGCCTCATGTTCGCCTCAGGCG...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCGCCTGAGGCGAACATaGGGCGGAACAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLRLRRT*GGTAAI
Trigger: GATGGCTGCTGTTCCGCCTCATGTTCGCCTCAGGCG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGAGCGGCTGGTCAGCTTaGCCACGCCTGAGGCGAACA +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRSGWSA*PRLRRT
Trigger: TGTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCT...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCAGCGGCTGGTCAGCTTaGCCACGCCTGAGGCGAACA +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLSGWSA*PRLRRT
Trigger: TGTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCT...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAAGTGTCTTCAGCCACTaGGAAAACTGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTSVFSH*ENWWKV
Trigger: CACCTTCCACCAGTTTTCTCAGTGGCTGAAGACACT...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGTCCAGGGGAGACAGCTaGGAGCGAGTCCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWSRGDS*ERVQWR
Trigger: CCTCCACTGGACTCGCTCTCAGCTGTCTCCCCTGGA...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCTCCAGGGGAGACAGCTaGGAGCGAGTCCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGSRGDS*ERVQWR
Trigger: CCTCCACTGGACTCGCTCTCAGCTGTCTCCCCTGGA...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGACCACGCTGAGCTTGTaGAGCCAGACCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWTTLSL*SQTGRW
Trigger: CCACCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGACCACGCTGAGCTTGTaGAGCCAGACCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRTTLSL*SQTGRW
Trigger: CCACCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGT...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGCACCAAGCCCAGTCATaGGGCGGAAGAGGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEHQAQS*GGRGRR
Trigger: CCTACGGCCTCTTCCGCCGCATGACTGGGCTTGGTG...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGGTGGCCGTCGTAACTaGCCTCCAGCACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWGGRRN*PPAPPQ
Trigger: CTGAGGTGGTGCTGGAGGGCAGTTACGACGGCCACC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGACTGGCTCCTTGCCCTaGAGCAGGCGCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWTGSLP*SRRKTR
Trigger: CCTGGTCTTGCGCCTGCTGCAGGGCAAGGAGCCAGT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCTCAATGCAGCACCCTaGAAACCCCAGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWLNAAP*KPQGQP
Trigger: GGGCTGCCCCTGGGGTTTGCAGGGTGCTGCATTGAG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCCTCAATGCAGCACCCTaGAAACCCCAGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESALNAAP*KPQGQP
Trigger: GGGCTGCCCCTGGGGTTTGCAGGGTGCTGCATTGAG...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCAGCAGCCAGGTGCTaGTCGTCCAGCAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESASAARC*SSSSAV
Trigger: CACTGCGCTGCTGGACGACCAGCACCTGGCTGCTGA...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGTCTTTCTGGGAGGCTaGCCTGCGCTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEVFLGG*PALLPA
Trigger: AGCGGGGAGAAGCGCAGGCCAGCCTCCCAGAAAGAC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGTCTTTCTGGGAGGCTaGCCTGCGCTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWVFLGG*PALLPA
Trigger: AGCGGGGAGAAGCGCAGGCCAGCCTCCCAGAAAGAC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCTCCGGAGTCTTTCTaGGAGGCTGGCCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEAPESF*EAGLRF
Trigger: GAAGCGCAGGCCAGCCTCCCAGAAAGACTCCGGAGC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGCTCCGGAGTCTTTCTaGGAGGCTGGCCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGAPESF*EAGLRF
Trigger: GAAGCGCAGGCCAGCCTCCCAGAAAGACTCCGGAGC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTACTGGAGCAGGGGTTaGGGGCTGCGGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAYWSRG*GLRWPV
Trigger: AACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTA...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGTACTGGAGCAGGGGTTaGGGGCTGCGGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEYWSRG*GLRWPV
Trigger: AACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTA...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCTAAGGCACAGTGGCTaGGTCCTGTCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLLRHSG*VLSCRR
Trigger: CCTCCGGCAGGACAGGACCCAGCCACTGTGCCTTAG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGGTGTGAAGATGACGTaGAAGATGACAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTGVKMT*KMTVLP
Trigger: GGGAAGCACTGTCATCTTCCACGTCATCTTCACACC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCAGCTTGACCACGCCTaGGGCGAACATGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRQLDHA*GEHEAE
Trigger: TTCCGCCTCATGTTCGCCTCAGGCGTGGTCAAGCTG...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGCAGCTTGACCACGCCTaGGGCGAACATGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEQLDHA*GEHEAE
Trigger: TTCCGCCTCATGTTCGCCTCAGGCGTGGTCAAGCTG...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGTTGGACTACAGCACTaGGCTTCCGTAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWVGLQH*ASVASP
Trigger: GGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAAC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCAAGACCAGGCTTGTaGACCACGGGCTGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAARPGL*TTGCAC
Trigger: ACACGCACAGCCCGTGGTTCACAAGCCTGGTCTTGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGCAAGACCAGGCTTGTaGACCACGGGCTGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGARPGL*TTGCAC
Trigger: ACACGCACAGCCCGTGGTTCACAAGCCTGGTCTTGC...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGTAGTCCAAACTGCCTaGGCAGCGTCTCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAVVQTA*AASPAW
Trigger: CCACGCTGGAGACGCTGCTCAGGCAGTTTGGACTAC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGATCCTTGCAGGTAGGATaGCCTCGGGGCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGSLQVG*PRGHTG
Trigger: GCCTGTATGGCCCCGAGGGCATCCTACCTGCAAGGA...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGATGGATGGTGCGCTGCTaGCAGTCAACCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGWMVRC*QSTSRP
Trigger: TGGCCTGGAGGTTGACTGGCAGCAGCGCACCATCCA...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGAGTGGATGGTGCGCTaGTGCCAGTCAACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAEWMVR*CQSTSR
Trigger: CCTGGAGGTTGACTGGCAGCAGCGCACCATCCACTC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCAGGCCACGGTCGCAGTaGCCACAAGGGACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLRPRSQ*PQGTVG
Trigger: TCCAACTGTCCCTTGTGGGCACTGCGACCGTGGCCT...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCAGGCCACGGTCGCAGTaGCCACAAGGGACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESARPRSQ*PQGTVG
Trigger: TCCAACTGTCCCTTGTGGGCACTGCGACCGTGGCCT...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCTGCAAACCACATCTaGCAGTCCAGGCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEAANHI*QSRRGW
Trigger: CCAGCCACGCCTGGACTGGCAGATGTGGTTTGCAGC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCGCTGCAAACCACATCTaGCAGTCCAGGCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLAANHI*QSRRGW
Trigger: CCAGCCACGCCTGGACTGGCAGATGTGGTTTGCAGC...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCGGATCACTGGCTCCTTaGCCTGCAGCAGGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLGSLAP*PAAGAR
Trigger: TCTTGCGCCTGCTGCAGGGCAAGGAGCCAGTGATCC...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGGATCACTGGCTCCTTaGCCTGCAGCAGGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWGSLAP*PAAGAR
Trigger: TCTTGCGCCTGCTGCAGGGCAAGGAGCCAGTGATCC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGGCCCTCTCAGGACGTaGAGCTGGGAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGGPLRT*SWENTA
Trigger: AGCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCGGCCCTCTCAGGACGTaGAGCTGGGAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLGPLRT*SWENTA
Trigger: AGCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCC...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGGCCATACAGGCCTGTaGGAGGGCATGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGGHTGL*EGMSWP
Trigger: TGGCCATGACATGCCCTCCCACAGGCCTGTATGGCC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216080.5
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGACAAGGCGGATCACTaGCTCCTTGCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGDKADH*LLALQQ
Trigger: CTGCTGCAGGGCAAGGAGCCAGTGATCCGCCTTGTC...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCTGGCCACTTGGCTCTaGACAAGGCGGATCACTGGC +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWLATWL*TRRITG
Trigger: GCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCTGGCCACTTGGCTCTaGACAAGGCGGATCACTGGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGLATWL*TRRITG
Trigger: GCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGTGGGCGGCTGCTTGTaGAAGGGATACCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGVGGCL*KGYLAT
Trigger: AGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCAC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTGGGCGGCTGCTTGTaGAAGGGATACCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGVGGCL*KGYLAT
Trigger: AGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCAC...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCCCCAGGGACACGGATaGGAAGAACTCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGPQGHG*EELLHP
Trigger: TGGGTGGAGGAGTTCTTCCCATCCGTGTCCCTGGGG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGATGGTCCTCGAACTACTaGAGCAGGGGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGWSSNY*SRGWGL
Trigger: CAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCA...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGTGGTCCTCGAACTACTaGAGCAGGGGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRWSSNY*SRGWGL
Trigger: CAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCA...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCTCAGCTAAGGCACAGTaGCTGGGTCCTGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGSAKAQ*LGPVLP
Trigger: CGGCAGGACAGGACCCAGCCACTGTGCCTTAGCTGA...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAAAGCGAAAGCAAACATaGAGACGGCCGCCACGCCCT +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGKRKQT*RRPPRP
Trigger: AGGGCGTGGCGGCCGTCTTCATGTTTGCTTTCGCTT...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGAAGCGAAAGCAAACATaGAGACGGCCGCCACGCCCT +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEKRKQT*RRPPRP
Trigger: AGGGCGTGGCGGCCGTCTTCATGTTTGCTTTCGCTT...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGAAAGCAGCAAGTAGATaGCAGGGTGGCGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEKAASR*QGGAVG
Trigger: GCCCACTGCGCCACCCTGTCATCTACTTGCTGCTTT...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAAAGCAGCAAGTAGATaGCAGGGTGGCGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGKAASR*QGGAVG
Trigger: GCCCACTGCGCCACCCTGTCATCTACTTGCTGCTTT...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGTTGGCCAGCTGTAGGTaGTCCACGGCACCAAACAGG +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGELASCR*STAPNR
Trigger: CCTGTTTGGTGCCGTGGAGCACCTACAGCTGGCCAA...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGATTGGCCAGCTGTAGGTaGTCCACGGCACCAAACAGG +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGLASCR*STAPNR
Trigger: CCTGTTTGGTGCCGTGGAGCACCTACAGCTGGCCAA...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGGTGCTAGCAGGGCTTaGACAAATCTGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAGASRA*TNLTAP
Trigger: GGGGGCTGTCAGATTTGTGCAAGCCCTGCTAGCACC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGCAGATCCCCCAGCCTaGGATTTGCGTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGADPPA*DLRVEG
Trigger: TCCCTCTACACGCAAATCCCAGGCTGGGGGATCTGC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216080.5
CDS-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCACCCAGCCACACAGTaGGCAGCGTCAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLHPATQ*AASVSS
Trigger: TGAAGACACTGACGCTGCCCACTGTGTGGCTGGGTG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAGAGGCCGTAGGAGTTaGCCAGCTGTAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGRGRRS*PAVGAP
Trigger: TGGAGCACCTACAGCTGGCCAACTCCTACGGCCTCT...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGAGAGGCCGTAGGAGTTaGCCAGCTGTAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWRGRRS*PAVGAP
Trigger: TGGAGCACCTACAGCTGGCCAACTCCTACGGCCTCT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGGATACCTGGCCACTTaGCTCTGGACAAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGGYLAT*LWTRRI
Trigger: GATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGATACCTGGCCACTTaGCTCTGGACAAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEGYLAT*LWTRRI
Trigger: GATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAGACTAGACTACCTCTaGGTCAGGGCCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGRLDYL*VRACRS
Trigger: GGATCTGCAGGCCCTGACTCAGAGGTAGTCTAGTCT...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216080.5
CDS-3UTR GCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCTTCTGGAGTGGATGGTaGGCTGCTGCCAGTCAACCT +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLFWSGW*AAASQP
Trigger: AGGTTGACTGGCAGCAGCGCACCATCCACTCCAGAA...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTTCTGGAGTGGATGGTaGGCTGCTGCCAGTCAACCT +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAFWSGW*AAASQP
Trigger: AGGTTGACTGGCAGCAGCGCACCATCCACTCCAGAA...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCTCCTGTAGTCCAAACTaGCTGAGCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGSCSPN*LSSVSS
Trigger: GCTGGAGACGCTGCTCAGGCAGTTTGGACTACAGGA...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGTGGTTCTGGAGTGGATaGTGCGCTGCTGCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEWFWSG*CAAASQ
Trigger: TTGACTGGCAGCAGCGCACCATCCACTCCAGAACCA...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTGGTTCTGGAGTGGATaGTGCGCTGCTGCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAWFWSG*CAAASQ
Trigger: TTGACTGGCAGCAGCGCACCATCCACTCCAGAACCA...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGAAAGTGGTTCTGGAGTaGATGGTGCGCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRKVVLE*MVRCCQ
Trigger: CTGGCAGCAGCGCACCATCCACTCCAGAACCACTTT...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCAAAGTGGTTCTGGAGTaGATGGTGCGCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLKVVLE*MVRCCQ
Trigger: CTGGCAGCAGCGCACCATCCACTCCAGAACCACTTT...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCACTTCTTTCGCCGGGTaGTCCTCGAACTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESATSFAG*SSNYWS
Trigger: GCTCCAGTAGTTCGAGGACCACCCGGCGAAAGAAGT...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCACTTCTTTCGCCGGGTaGTCCTCGAACTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGTSFAG*SSNYWS
Trigger: GCTCCAGTAGTTCGAGGACCACCCGGCGAAAGAAGT...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGTCCCAGGCTTGTACATaGACTCGATCTCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRSQACT*TRSPSS
Trigger: ACTGGACGGAGATCGAGTTCATGTACAAGCCTGGGA...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCTCCCAGGCTTGTACATaGACTCGATCTCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGSQACT*TRSPSS
Trigger: ACTGGACGGAGATCGAGTTCATGTACAAGCCTGGGA...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCAAAGTAGTGCACAGTaGCATAGGCCAGAAGCCCGT +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWQSSAQ*HRPEAR
Trigger: ACGGGCTTCTGGCCTATGGCACTGTGCACTACTTTG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCCCACAAGGGACAGTTaGACTACAGCACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRPTRDS*TTALSF
Trigger: GAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGG...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGCCCACAAGGGACAGTTaGACTACAGCACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWPTRDS*TTALSF
Trigger: GAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGG...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGTGTGGAAGGGATACCTaGCCACTTGGCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: VVFSSWANHRGNSGSPGECGRDT*PLGSGQ
Trigger: TTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACA...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCTCAGGACGTGCAGCTaGGAGAACACAGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGLRTCS*ENTATS
Trigger: AGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCAGTGTCTTCAGCCACTaGGAAAACTGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESASVFSH*ENWWKV
Trigger: CACCTTCCACCAGTTTTCTCAGTGGCTGAAGACACT...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAGACGCCTTTATTGGTaGCCAGATCTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGRRLYW*PDLKGR
Trigger: CCTGCCCTTTAGATCTGGGCACCAATAAAGGCGTCT...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR GCA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGAGACGCCTTTATTGGTaGCCAGATCTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWRRLYW*PDLKGR
Trigger: CCTGCCCTTTAGATCTGGGCACCAATAAAGGCGTCT...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGTCGTGTTTTCCTCCTaGGCCAATCACAGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRVVFSS*ANHRGN
Trigger: ATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGGTGTGAAGATGACGTaGAAGATGACAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGGVKMT*KMTVLP
Trigger: GGGAAGCACTGTCATCTTCCACGTCATCTTCACACC...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAAAAACTGGTGGAAGGTaGAAGTGGTTCTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGKTGGR*KWFWSG
Trigger: TCCACTCCAGAACCACTTTCACCTTCCACCAGTTTT...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR TCA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGAAAACTGGTGGAAGGTaGAAGTGGTTCTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRKTGGR*KWFWSG
Trigger: TCCACTCCAGAACCACTTTCACCTTCCACCAGTTTT...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAAAAAGACGCCTTTATTaGTGCCCAGATCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGKRRLY*CPDLKG
Trigger: GCCCTTTAGATCTGGGCACCAATAAAGGCGTCTTTT...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CCA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCAAAAGACGCCTTTATTaGTGCCCAGATCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAKRRLY*CPDLKG
Trigger: GCCCTTTAGATCTGGGCACCAATAAAGGCGTCTTTT...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS GCA 90 bp CCCACAGCAGCGTCGGGGTCTCCCACAGCTGCTGCCAGCGCCCCTTaGCCTGAGGCCGCAGCGTCCTCCTTGCAGGTAGGATGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: PTAASGSPTAAASAP*PEAAASSLQVGCPR
Trigger: CCGAGGGCATCCTACCTGCAAGGAGGACGCTGCGGCCTCAGGGCAAGGGGCGCTGGCAGCAGCTGTGGGAGACCCCGACGCTGCTGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
ENST00000507607.1
CDS GCA 90 bp GCGAAAGCAAACATGAAGACGGCCGCCACGCCCTGGAGGAAGAGCTaGCGCGGGAGCCGGGAGCCCGCCATGTCCGCTACGCGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: AKANMKTAATPWRKS*RGSREPAMSATRPA
Trigger: AGCGGGCCGCGTAGCGGACATGGCGGGCTCCCGGCTCCCGCGGCAGCTCTTCCTCCAGGGCGTGGCGGCCGTCTTCATGTTTGCTTTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474879.7
CDS-3UTR CAA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGCCACCACGCTGAGCTaGTGCAGCCAGACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSATTLS*CSQTGR
Trigger: CCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGTGGC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS GCA 90 bp AACCACGGGCTGTGCGTGTGTGGGCCCAGGGCTGCAAACCACATCTaGCAGTCCAGGCGTGGCTGGTGGGGCACCACAACCGGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: NHGLCVCGPRAANHI*QSRRGWWGTTTGGG
Trigger: GCCGCCCCCGGTTGTGGTGCCCCACCAGCCACGCCTGGACTGGCAGATGTGGTTTGCAGCCCTGGGCCCACACACGCACAGCCCGTGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 90 bp TGCGGTGGCCTGTTCGGAGGCAGCTCCGGAGTCTTTCTGGGAGGCTaGCCTGCGCTTCTCCCCGCTGACTGGTGCCAGCGGGGAGGACCG +
Preference number: 5 (lower is better)
Translates to: CGGLFGGSSGVFLGG*PALLPADWCQRGGP
Trigger: CGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAGAAGCGCAGGCCAGCCTCCCAGAAAGACTCCGGAGCTGCCTCCGAACAGGCCACCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 90 bp GCCGGGTGGTCCTCGAACTACTGGAGCAGGGGTTGGGGGCTGCGGTaGCCTGTTCGGAGGCAGCTCCGGAGTCTTTCTGGGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AGWSSNYWSRGWGLR*PVRRQLRSLSGRLA
Trigger: GGCCAGCCTCCCAGAAAGACTCCGGAGCTGCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS-3UTR CAA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACATGGGCCAGGGTGCTGTaGGCGCTGCGGGTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTWARVL*ALRVRG
Trigger: ACCTCGCACCCGCAGCGCCAACAGCACCCTGGCCCA...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 90 bp GCCGTCCACCAAGCCCAGTCATGCGGCGGAAGAGGCCGTAGGAGTTaGCCAGCTGTAGGTGCTCCACGGCACCAAACAGGCGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: AVHQAQSCGGRGRRS*PAVGAPRHQTGGGP
Trigger: GGGCCCACCGCCTGTTTGGTGCCGTGGAGCACCTACAGCTGGCCAACTCCTACGGCCTCTTCCGCCGCATGACTGGGCTTGGTGGACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
ENST00000514938.1
CDS CCA 90 bp ACAGCACTGAGCTTCCGTAGCCAGCCCCGCACCTGGGTCCACCTGTaGGCAAGGACCCAAGGTCGTCAGGCCGGCCCTGCACACCTGTGC +
Preference number: 5 (lower is better)
Translates to: TALSFRSQPRTWVHL*ARTQGRQAGPAHLC
Trigger: GCACAGGTGTGCAGGGCCGGCCTGACGACCTTGGGTCCTTGCCCACAGGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514938.1
CDS-3UTR CAA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGCCGCAGCGTCCTCCTaGCAGGTAGGATGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTAAASS*QVGCPR
Trigger: CCGAGGGCATCCTACCTGCAAGGAGGACGCTGCGGC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGGGATACCTGGCCACTaGGCTCTGGACAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSGIPGH*ALDKAD
Trigger: ATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS TCA 90 bp GAGCCCCCACCACGCAGGGCAGCGGCTGGTCAGCTTGACCACGCCTaGGGCGAACATGAGGCGGAACAGCAGCCATCGCACCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: EPPPRRAAAGQLDHA*GEHEAEQQPSHQPE
Trigger: TTCTGGCTGGTGCGATGGCTGCTGTTCCGCCTCATGTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCTGCCCTGCGTGGTGGGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
CDS TCA 90 bp CAGCTCCGGAGTCTTTCTGGGAGGCTGGCCTGCGCTTCTCCCCGCTaGCTGGTGCCAGCGGGGAGGACCGGAGAGAACAGGGTGCTAGCA +
Preference number: 5 (lower is better)
Translates to: QLRSLSGRLACASPR*LVPAGRTGENRVLA
Trigger: TGCTAGCACCCTGTTCTCTCCGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAGAAGCGCAGGCCAGCCTCCCAGAAAGACTCCGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS TCA 90 bp CCGCACCTGGCTCCTTGCCCTGCAGCAGGCGCAAGACCAGGCTTGTaGACCACGGGCTGTGCGTGTGTGGGCCCAGGGCTGCAAACCACA +
Preference number: 5 (lower is better)
Translates to: PHLAPCPAAGARPGL*TTGCACVGPGLQTT
Trigger: TGTGGTTTGCAGCCCTGGGCCCACACACGCACAGCCCGTGGTTCACAAGCCTGGTCTTGCGCCTGCTGCAGGGCAAGGAGCCAGGTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS GCA 90 bp GTGGCCGTCTTCTTGCGGCTGCCGTGGCCAGGCTCAGCAGCCAGGTaGTGGTCGTCCAGCAGCGCAGTGGTAAGCACCAGCGTCATCAGG +
Preference number: 5 (lower is better)
Translates to: VAVFLRLPWPGSAAR*WSSSSAVVSTSVIR
Trigger: CCTGATGACGCTGGTGCTTACCACTGCGCTGCTGGACGACCAGCACCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAAGACGGCCAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS GCA 90 bp CTTTCGCCGGGTGGTCCTCGAACTACTGGAGCAGGGGTTGGGGGCTaGGGTGGCCTGTTCGGAGGCAGCTCCGGAGTCTTTCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LSPGGPRTTGAGVGG*GGLFGGSSGVFLGG
Trigger: GCCTCCCAGAAAGACTCCGGAGCTGCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACCCGGCGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 90 bp TGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTaGAGCTGGGAGAACACAGCTACTTCTTTCGCCGGGTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: CRRPEHSRRPGPLRT*SWENTATSFAGWSS
Trigger: CGAGGACCACCCGGCGAAAGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS TCA 90 bp AGGCCACGGTCGCAGTGCCCACAAGGGACAGTTGGACTACAGCACTaGGCTTCCGTAGCCAGCCCCGCACCTGGGTCCACCTCCACAGGG +
Preference number: 5 (lower is better)
Translates to: RPRSQCPQGTVGLQH*ASVASPAPGSTSTG
Trigger: CCCTGTGGAGGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGCACTGCGACCGTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 90 bp GTGGAAGGGATACCTGGCCACTTGGCTCTGGACAAGGCGGATCACTaGAGCGAGAGGCATCAGCGTGGCCCCCACAGTACCCGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: VEGIPGHLALDKADH*SERHQRGPHSTRPA
Trigger: GGCAGGGCGGGTACTGTGGGGGCCACGCTGATGCCTCTCGCTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS CCA 90 bp GCCGTCTTCTTGCGGCTGCCGTGGCCAGGCTCAGCAGCCAGGTGCTaGTCGTCCAGCAGCGCAGTGGTAAGCACCAGCGTCATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: AVFLRLPWPGSAARC*SSSSAVVSTSVIRL
Trigger: CAACCTGATGACGCTGGTGCTTACCACTGCGCTGCTGGACGACCAGCACCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAAGACGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS CCA 90 bp GACAGTTGGACTACAGCACTGAGCTTCCGTAGCCAGCCCCGCACCTaGGTCCACCTGTGGGCAAGGACCCAAGGTCGTCAGGCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: DSWTTALSFRSQPRT*VHLWARTQGRQAGP
Trigger: AGGGCCGGCCTGACGACCTTGGGTCCTTGCCCACAGGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514938.1
CDS-3UTR CAA 90 bp TCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCGCCCACAAGGGACAGTaGGACTACAGCACTGAGCTT +
Preference number: 5 (lower is better)
Translates to: SCRRPEHSRRPGPLRTCSAHKGQ*DYSTEL
Trigger: AAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGC...GCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS TCA 90 bp ACAGGGGCGGCACAGCGATCTCAATTAGGAAGGTGGCCACCACGCTaGGCTTGTGCAGCCAGACCGGCAGGTGGTGTGCGAACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TGAAQRSQLGRWPPR*ACAARPAGGVRTRR
Trigger: CCGCCTGGTTCGCACACCACCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGTGGCCACCTTCCTAATTGAGATCGCTGTGCCGCCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
ENST00000514938.1
CDS TCA 90 bp AGGCCACGGTCGCAGTGCCCACAAGGGACAGTTGGACTACAGCACTaGGCTTCCGTAGCCAGCCCCGCACCTGGGTCCACCTGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: RPRSQCPQGTVGLQH*ASVASPAPGSTCGQ
Trigger: TTGCCCACAGGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGCACTGCGACCGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514938.1
CDS GCA 90 bp AACTGCCCTCCAGCACCACCTCAGGCCGTCCACCAAGCCCAGTCATaGGGCGGAAGAGGCCGTAGGAGTTGGCCAGCTGTAGGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: NCPPAPPQAVHQAQS*GGRGRRSWPAVGAP
Trigger: TGGAGCACCTACAGCTGGCCAACTCCTACGGCCTCTTCCGCCGCATGACTGGGCTTGGTGGACGGCCTGAGGTGGTGCTGGAGGGCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 90 bp TTGCCCTGCAGCAGGCGCAAGACCAGGCTTGTGAACCACGGGCTGTaGGTGTGTGGGCCCAGGGCTGCAAACCACATCTGCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPCSRRKTRLVNHGL*VCGPRAANHICQSR
Trigger: CCTGGACTGGCAGATGTGGTTTGCAGCCCTGGGCCCACACACGCACAGCCCGTGGTTCACAAGCCTGGTCTTGCGCCTGCTGCAGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 90 bp GCTGGGCTCGGACGTAGGTGGGCGGCTGCTTGTGGAAGGGATACCTaGCCACTTGGCTCTGGACAAGGCGGATCACTGGCTCCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: AGLGRRWAAACGRDT*PLGSGQGGSLAPCP
Trigger: AGGGCAAGGAGCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCCGAGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 90 bp GCTGGGCTCGGACGTAGGTGGGCGGCTGCTTGTGGAAGGGATACCTaGCCACTTGGCTCTGGACAAGGCGGATCACTGCAGCGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: AGLGRRWAAACGRDT*PLGSGQGGSLQREA
Trigger: TGCCTCTCGCTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCCGAGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS-3UTR CAA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGGCCCTGGACAGCCCTaGCAGACTAGACTACCTCTG +
Preference number: 5 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTGPGQP*QTRLPL
Trigger: CAGAGGTAGTCTAGTCTGCAAGGGCTGTCCAGGGCC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216080.5
CDS-3UTR CAA 90 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGGGATACCTGGCCACTaGGCTCTGGACAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: PEHSRRPGPLRTCSWENTGIPGH*ALDKAD
Trigger: ATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCC...TGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 90 bp ACAGCTGAGAGCGAGTCCAGTGGAGGGCCTGGGCCAGGGTGCTGTTaGCGCTGCGGGTGCGAGGTGGGCTTTTCTCCTGTAGTCCAAACT +
Preference number: 5 (lower is better)
Translates to: TAESESSGGPGPGCC*RCGCEVGFSPVVQT
Trigger: AGTTTGGACTACAGGAGAAAAGCCCACCTCGCACCCGCAGCGCCAACAGCACCCTGGCCCAGGCCCTCCACTGGACTCGCTCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 90 bp TGGGAGAACACAGCTACTTCTTTCGCCGGGTGGTCCTCGAACTACTaGAGCAGGGGTTGGGGGCTGCGGTGGCCTGTTCGGAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: WENTATSFAGWSSNY*SRGWGLRWPVRRQL
Trigger: GAGCTGCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACCCGGCGAAAGAAGTAGCTGTGTTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 90 bp CTCAGGACGTGCAGCTGGGAGAACACAGCTACTTCTTTCGCCGGGTaGTCCTCGAACTACTGGAGCAGGGGTTGGGGGCTGCGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LRTCSWENTATSFAG*SSNYWSRGWGLRWP
Trigger: AGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACCCGGCGAAAGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 90 bp AGGCCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTaGGAGAACACAGCTACTTCTTTCGCCGGGTGGTCCTCGAACTAC +
Preference number: 5 (lower is better)
Translates to: RPEHSRRPGPLRTCS*ENTATSFAGWSSNY
Trigger: GTAGTTCGAGGACCACCCGGCGAAAGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS-3UTR CAA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTGGGCCAGGGTGCTGTaGGCGCTGCGGGTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAWARVL*ALRVRG
Trigger: ACCTCGCACCCGCAGCGCCAACAGCACCCTGGCCCA...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 90 bp CAGGCTGGGAGAACCAGTACTTGTAGCGCTGGGCTCGGACGTAGGTaGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTTGGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QAGRTSTCSAGLGRR*AAACGRDTWPLGSG
Trigger: TCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCCGAGCCCAGCGCTACAAGTACTGGTTCTCCCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS-3UTR CAA 90 bp GTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCGCCGCAGCGTCCTCCTaGCAGGTAGGATGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: VKMTWKMTVLPLFPWESAAAASS*QVGCPR
Trigger: CCGAGGGCATCCTACCTGCAAGGAGGACGCTGCGGC...GGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGCCACCACGCTGAGCTaGTGCAGCCAGACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGATTLS*CSQTGR
Trigger: CCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGTGGC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS GCA 90 bp TGGTGCGCTGCTGCCAGTCAACCTCCAGGCCAAAGTAGTGCACAGTaGCATAGGCCAGAAGCCCGTAGACGGCTAGTTCCAGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: WCAAASQPPGQSSAQ*HRPEARRRLVPAAA
Trigger: CGCTGCTGCTGGAACTAGCCGTCTACGGGCTTCTGGCCTATGGCACTGTGCACTACTTTGGCCTGGAGGTTGACTGGCAGCAGCGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS CCA 90 bp CTAATCAGGAACAAGGCCACGGTCGCAGTGCCCACAAGGGACAGTTaGACTACAGCACTGAGCTTCCGTAGCCAGCCCCGCACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LIRNKATVAVPTRDS*TTALSFRSQPRTWV
Trigger: GACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGCACTGCGACCGTGGCCTTGTTCCTGATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
ENST00000514938.1
CDS-3UTR CAA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCAGCGGCTGGTCAGCTaGACCACGCCTGAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGQRLVS*TTPEAN
Trigger: GTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCTG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCCCCCCAGCCTGGGATTaGCGTGTAGAGGGAAGCGAA +
Preference number: 5 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGPPAWD*RVEGSE
Trigger: TTCGCTTCCCTCTACACGCAAATCCCAGGCTGGGGG...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216080.5
CDS-3UTR CAA 90 bp TCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGGGCAGGGGAAGGGTCTaGAGCTTGGTCGTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SCFPPGPITEAIVGVLGRGRGRV*SLVVFS
Trigger: GGAAAACACGACCAAGCTCAAGACCCTTCCCCTGCC...CCTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGGCAGGGGAAGGGTCTaGAGCTTGGTCGTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGGRGRV*SLVVFS
Trigger: GGAAAACACGACCAAGCTCAAGACCCTTCCCCTGCC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp GTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCAATAGTGGGAGTCCTGGGGAGGCCCACAAGGGACAGTaGGACTACAGCACTGAGCTT +
Preference number: 5 (lower is better)
Translates to: VVFSSWANHRGNSGSPGEAHKGQ*DYSTEL
Trigger: AAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGC...CTCCCCAGGACTCCCACTATTGCCTCTGTGATTGGCCCAGGAGGAAAACACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp AGGGGAAGGGTCTTGAGCTTGGTCGTGTTTTCCTCCTGGGCCAATCACAGAGGCGGAAGGGTCTTGAGCTaGGTCGTGTTTTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RGRVLSLVVFSSWANHRGGRVLS*VVFSSW
Trigger: CCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCC...GCCTCTGTGATTGGCCCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp TGGGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGGAAGGGTCTTGAGCTaGGTCGTGTTTTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WAGVKMTWKMTVLPLFPWGRVLS*VVFSSW
Trigger: CCAGGAGGAAAACACGACCAAGCTCAAGACCCTTCC...CCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGACTCAGGTTCCCAGGCTaGTACATGAACTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGLRFPG*YMNSIS
Trigger: GGAGATCGAGTTCATGTACAAGCCTGGGAACCTGAG...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS-3UTR CAA 90 bp GGCTGGTGTGAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAATACAGGCCTGGGATTaGCGTGTAGAGGGAAGCGAA +
Preference number: 5 (lower is better)
Translates to: GWCEDDVEDDSASPLPLGIQAWD*RVEGSE
Trigger: TTCGCTTCCCTCTACACGCAAATCCCAGGCCTGTAT...TCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTCACACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474879.7
CDS-3UTR CAA 90 bp GAAGATGACGTGGAAGATGACAGTGCTTCCCCTCTTCCCCTGGGAGTCAGCCTCCAAAAGACGCCTTTATaGGTGCCCAGATCTAAAGGG +
Preference number: 5 (lower is better)
Translates to: EDDVEDDSASPLPLGVSLQKTPL*VPRSKG
Trigger: CCCTTTAGATCTGGGCACCAATAAAGGCGTCTTTTG...GAGGCTGACTCCCAGGGGAAGAGGGGAAGCACTGTCATCTTCCACGTCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 72 bp GCCAGCTGTAGGTGCTCCACGGCACCAAACAGGCGGTaGGCCCCGGTCCAGAGGCGCCCGTGGGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: ASCRCSTAPNRR*APVQRRPWVPG
Trigger: GCCCGGGACCCACGGGCGCCTCTGGACCGGGGCCCACCGCCTGTTTGGTGCCGTGGAGCACCTACAGCTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
ENST00000514938.1
CDS GCA 72 bp GGGCCTTGGGCCAGGAGGTGGCCGTCTTCTTGCGGCTaGCGTGGCCAGGCTCAGCAGCCAGGTGCTGGTCGT +
Preference number: 6 (lower is better)
Translates to: GPWARRWPSSCG*RGQAQQPGAGR
Trigger: ACGACCAGCACCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAAGACGGCCACCTCCTGGCCCAAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS CCA 72 bp GAAGCGAAAGCAAACATGAAGACGGCCGCCACGCCCTaGAGGAAGAGCTGCCGCGGGAGCCGGGAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: EAKANMKTAATP*RKSCRGSREPA
Trigger: GGCGGGCTCCCGGCTCCCGCGGCAGCTCTTCCTCCAGGGCGTGGCGGCCGTCTTCATGTTTGCTTTCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 72 bp TTGGGCCAGGAGGTGGCCGTCTTCTTGCGGCTGCCGTaGCCAGGCTCAGCAGCCAGGTGCTGGTCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LGQEVAVFLRLP*PGSAARCWSSS
Trigger: GCTGGACGACCAGCACCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAAGACGGCCACCTCCTGGCCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS CCA 72 bp CCTGTCCTGCCGGAGGCCAGAGCACTCCCGGCGACCTaGCCCTCTCAGGACGTGCAGCTGGGAGAACACAGC +
Preference number: 6 (lower is better)
Translates to: PVLPEARALPAT*PSQDVQLGEHS
Trigger: GCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGGCCTCCGGCAGGACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp AGCTTCCGTAGCCAGCCCCGCACCTGGGTCCACCTGTaGGCAAGGACCCAAGGTCGTCAGGCCGGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: SFRSQPRTWVHL*ARTQGRQAGPA
Trigger: TGCAGGGCCGGCCTGACGACCTTGGGTCCTTGCCCACAGGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514938.1
CDS CAA 90 bp GTGAGGGCAGTGAGCCCCCACCACGCAGGGCAGCGGCTGGTCAGCTaGACCACGCCTGAGGCGAACATGAGGCGGAACAGCAGCCATCGC +
Preference number: 6 (lower is better)
Translates to: VRAVSPHHAGQRLVS*TTPEANMRRNSSHR
Trigger: GCGATGGCTGCTGTTCCGCCTCATGTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCTGCCCTGCGTGGTGGGGGCTCACTGCCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
CDS TCA 72 bp GCTCCTTGCCCTGCAGCAGGCGCAAGACCAGGCTTGTaGACCACGGGCTGTGCGTGTGTGGGCCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: APCPAAGARPGL*TTGCACVGPGL
Trigger: CAGCCCTGGGCCCACACACGCACAGCCCGTGGTTCACAAGCCTGGTCTTGCGCCTGCTGCAGGGCAAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp TTGCGGCTGCCGTGGCCAGGCTCAGCAGCCAGGTGCTaGTCGTCCAGCAGCGCAGTGGTAAGCACCAGCGTC +
Preference number: 6 (lower is better)
Translates to: LRLPWPGSAARC*SSSSAVVSTSV
Trigger: GACGCTGGTGCTTACCACTGCGCTGCTGGACGACCAGCACCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS CAA 72 bp GTGAGCCCCCACCACGCAGGGCAGCGGCTGGTCAGCTaGACCACGCCTGAGGCGAACATGAGGCGGAACAGC +
Preference number: 6 (lower is better)
Translates to: VSPHHAGQRLVS*TTPEANMRRNS
Trigger: GCTGTTCCGCCTCATGTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCTGCCCTGCGTGGTGGGGGCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
CDS CAA 90 bp GGCGGCACAGCGATCTCAATTAGGAAGGTGGCCACCACGCTGAGCTaGTGCAGCCAGACCGGCAGGTGGTGTGCGAACCAGGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: GGTAISIRKVATTLS*CSQTGRWCANQAAG
Trigger: GCCCGCCGCCTGGTTCGCACACCACCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGTGGCCACCTTCCTAATTGAGATCGCTGTGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
ENST00000514938.1
CDS TCA 72 bp CCACGCAGGGCAGCGGCTGGTCAGCTTGACCACGCCTaGGGCGAACATGAGGCGGAACAGCAGCCATCGCAC +
Preference number: 6 (lower is better)
Translates to: PRRAAAGQLDHA*GEHEAEQQPSH
Trigger: GTGCGATGGCTGCTGTTCCGCCTCATGTTCGCCTCAGGCGTGGTCAAGCTGACCAGCCGCTGCCCTGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
CDS TCA 72 bp AGTCTTTCTGGGAGGCTGGCCTGCGCTTCTCCCCGCTaGCTGGTGCCAGCGGGGAGGACCGGAGAGAACAGG +
Preference number: 6 (lower is better)
Translates to: SLSGRLACASPR*LVPAGRTGENR
Trigger: CCTGTTCTCTCCGGTCCTCCCCGCTGGCACCAGTCAGCGGGGAGAAGCGCAGGCCAGCCTCCCAGAAAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 72 bp TTCTTGCGGCTGCCGTGGCCAGGCTCAGCAGCCAGGTaGTGGTCGTCCAGCAGCGCAGTGGTAAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: FLRLPWPGSAAR*WSSSSAVVSTS
Trigger: GCTGGTGCTTACCACTGCGCTGCTGGACGACCAGCACCTGGCTGCTGAGCCTGGCCACGGCAGCCGCAAGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1
CDS GCA 72 bp CTGTGCGTGTGTGGGCCCAGGGCTGCAAACCACATCTaGCAGTCCAGGCGTGGCTGGTGGGGCACCACAACC +
Preference number: 6 (lower is better)
Translates to: LCVCGPRAANHI*QSRRGWWGTTT
Trigger: GGTTGTGGTGCCCCACCAGCCACGCCTGGACTGGCAGATGTGGTTTGCAGCCCTGGGCCCACACACGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp TTGCAGGTAGGATGCCCTCGGGGCCATACAGGCCTGTaGGAGGGCATGTCATGGCCAGGCCCTGGACAGCCC +
Preference number: 6 (lower is better)
Translates to: LQVGCPRGHTGL*EGMSWPGPGQP
Trigger: GGGCTGTCCAGGGCCTGGCCATGACATGCCCTCCCACAGGCCTGTATGGCCCCGAGGGCATCCTACCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000507607.1
CDS GCA 72 bp CCAGCACCACCTCAGGCCGTCCACCAAGCCCAGTCATaGGGCGGAAGAGGCCGTAGGAGTTGGCCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: PAPPQAVHQAQS*GGRGRRSWPAV
Trigger: TACAGCTGGCCAACTCCTACGGCCTCTTCCGCCGCATGACTGGGCTTGGTGGACGGCCTGAGGTGGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 72 bp TCCAGTGGAGGGCCTGGGCCAGGGTGCTGTTGGCGCTaGGGGTGCGAGGTGGGCTTTTCTCCTGTAGTCCAA +
Preference number: 6 (lower is better)
Translates to: SSGGPGPGCCWR*GCEVGFSPVVQ
Trigger: TTGGACTACAGGAGAAAAGCCCACCTCGCACCCGCAGCGCCAACAGCACCCTGGCCCAGGCCCTCCACTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 72 bp GGTGGTCCTCGAACTACTGGAGCAGGGGTTGGGGGCTaGGGTGGCCTGTTCGGAGGCAGCTCCGGAGTCTTT +
Preference number: 6 (lower is better)
Translates to: GGPRTTGAGVGG*GGLFGGSSGVF
Trigger: AAAGACTCCGGAGCTGCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 72 bp CCAGAGCACTCCCGGCGACCTGGCCCTCTCAGGACGTaGAGCTGGGAGAACACAGCTACTTCTTTCGCCGGG +
Preference number: 6 (lower is better)
Translates to: PEHSRRPGPLRT*SWENTATSFAG
Trigger: CCCGGCGAAAGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTGCTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp TCCTCGAACTACTGGAGCAGGGGTTGGGGGCTGCGGTaGCCTGTTCGGAGGCAGCTCCGGAGTCTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: SSNYWSRGWGLR*PVRRQLRSLSG
Trigger: CCCAGAAAGACTCCGGAGCTGCCTCCGAACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp CACTCCCGGCGACCTGGCCCTCTCAGGACGTGCAGCTaGGAGAACACAGCTACTTCTTTCGCCGGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: HSRRPGPLRTCS*ENTATSFAGWS
Trigger: GGACCACCCGGCGAAAGAAGTAGCTGTGTTCTCCCAGCTGCACGTCCTGAGAGGGCCAGGTCGCCGGGAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CAA 72 bp ACCACAACCGGGGGCGGCCGGCTCAGGTTCCCAGGCTaGTACATGAACTCGATCTCCGTCCAGTGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: TTTGGGRLRFPG*YMNSISVQWWP
Trigger: CGGCCACCACTGGACGGAGATCGAGTTCATGTACAAGCCTGGGAACCTGAGCCGGCCGCCCCCGGTTGTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS TCA 72 bp TCGCAGTGCCCACAAGGGACAGTTGGACTACAGCACTaGGCTTCCGTAGCCAGCCCCGCACCTGGGTCCACC +
Preference number: 6 (lower is better)
Translates to: SQCPQGTVGLQH*ASVASPAPGST
Trigger: GGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGCACTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
ENST00000514938.1
CDS CCA 72 bp CAAGCCCAGTCATGCGGCGGAAGAGGCCGTAGGAGTTaGCCAGCTGTAGGTGCTCCACGGCACCAAACAGGC +
Preference number: 6 (lower is better)
Translates to: QAQSCGGRGRRS*PAVGAPRHQTG
Trigger: GCCTGTTTGGTGCCGTGGAGCACCTACAGCTGGCCAACTCCTACGGCCTCTTCCGCCGCATGACTGGGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
ENST00000514938.1
CDS CCA 72 bp GTGGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTTaGCTCTGGACAAGGCGGATCACTGGCTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: VGGCLWKGYLAT*LWTRRITGSLP
Trigger: GGGCAAGGAGCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 72 bp ACAGCTACTTCTTTCGCCGGGTGGTCCTCGAACTACTaGAGCAGGGGTTGGGGGCTGCGGTGGCCTGTTCGG +
Preference number: 6 (lower is better)
Translates to: TATSFAGWSSNY*SRGWGLRWPVR
Trigger: CCGAACAGGCCACCGCAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACCCGGCGAAAGAAGTAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp GTGGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTTaGCTCTGGACAAGGCGGATCACTGCAGCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: VGGCLWKGYLAT*LWTRRITAARG
Trigger: GCCTCTCGCTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS CCA 72 bp ACTACAGCACTGAGCTTCCGTAGCCAGCCCCGCACCTaGGTCCACCTGTGGGCAAGGACCCAAGGTCGTCAG +
Preference number: 6 (lower is better)
Translates to: TTALSFRSQPRT*VHLWARTQGRQ
Trigger: CTGACGACCTTGGGTCCTTGCCCACAGGTGGACCCAGGTGCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514938.1
CDS CAA 72 bp GGTGGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTaGGCTCTGGACAAGGCGGATCACTGGCTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: GGRLLVEGIPGH*ALDKADHWLLA
Trigger: GGCAAGGAGCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CAA 72 bp GGTGGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTaGGCTCTGGACAAGGCGGATCACTGCAGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: GGRLLVEGIPGH*ALDKADHCSER
Trigger: CCTCTCGCTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS CAA 90 bp TCGGACGTAGGTGGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTaGGCTCTGGACAAGGCGGATCACTGGCTCCTTGCCCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SDVGGRLLVEGIPGH*ALDKADHWLLALQQ
Trigger: CTGCTGCAGGGCAAGGAGCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CAA 90 bp TCGGACGTAGGTGGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTaGGCTCTGGACAAGGCGGATCACTGCAGCGAGAGGCATCAGCGT +
Preference number: 6 (lower is better)
Translates to: SDVGGRLLVEGIPGH*ALDKADHCSERHQR
Trigger: ACGCTGATGCCTCTCGCTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS TCA 72 bp CAGGCCCTGGACAGCCCTTGCAGACTAGACTACCTCTaGGTCAGGGCCTGCAGATCCCCCAGCCTAGGTCAG +
Preference number: 6 (lower is better)
Translates to: QALDSPCRLDYL*VRACRSPSLGQ
Trigger: CTGACCTAGGCTGGGGGATCTGCAGGCCCTGACTCAGAGGTAGTCTAGTCTGCAAGGGCTGTCCAGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507607.1
CDS GCA 72 bp ATACCTGGCCACTTGGCTCTGGACAAGGCGGATCACTaGAGCGAGAGGCATCAGCGTGGCCCCCACAGTACC +
Preference number: 6 (lower is better)
Translates to: IPGHLALDKADH*SERHQRGPHST
Trigger: GGTACTGTGGGGGCCACGCTGATGCCTCTCGCTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS CCA 72 bp CCTGCGAGTAGAAAGCAGCCAAGCGCAGGCGTCGAATaGGGGCGAAGAACAGGGGCGGCACAGCGATCTCAA +
Preference number: 6 (lower is better)
Translates to: PASRKQPSAGVE*GRRTGAAQRSQ
Trigger: TTGAGATCGCTGTGCCGCCCCTGTTCTTCGCCCCCATTCGACGCCTGCGCTTGGCTGCTTTCTACTCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
ENST00000514938.1
CDS CCA 72 bp AACAAGGCCACGGTCGCAGTGCCCACAAGGGACAGTTaGACTACAGCACTGAGCTTCCGTAGCCAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: NKATVAVPTRDS*TTALSFRSQPR
Trigger: GCGGGGCTGGCTACGGAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGCACTGCGACCGTGGCCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
ENST00000514938.1
CDS CCA 72 bp CAAGACCAGGCTTGTGAACCACGGGCTGTGCGTGTGTaGGCCCAGGGCTGCAAACCACATCTGCCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: QDQACEPRAVRV*AQGCKPHLPVQ
Trigger: CTGGACTGGCAGATGTGGTTTGCAGCCCTGGGCCCACACACGCACAGCCCGTGGTTCACAAGCCTGGTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CCA 72 bp GGCTGCTTGTGGAAGGGATACCTGGCCACTTGGCTCTaGACAAGGCGGATCACTGGCTCCTTGCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GCLWKGYLATWL*TRRITGSLPCS
Trigger: GCTGCAGGGCAAGGAGCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 72 bp GGACGTAGGTGGGCGGCTGCTTGTGGAAGGGATACCTaGCCACTTGGCTCTGGACAAGGCGGATCACTGGCT +
Preference number: 6 (lower is better)
Translates to: GRRWAAACGRDT*PLGSGQGGSLA
Trigger: AGCCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216080.5
ENST00000474879.7
CDS CCA 72 bp GGACGTAGGTGGGCGGCTGCTTGTGGAAGGGATACCTaGCCACTTGGCTCTGGACAAGGCGGATCACTGCAG +
Preference number: 6 (lower is better)
Translates to: GRRWAAACGRDT*PLGSGQGGSLQ
Trigger: CTGCAGTGATCCGCCTTGTCCAGAGCCAAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504717.1
CDS CCA 72 bp TGCAGCTGGGAGAACACAGCTACTTCTTTCGCCGGGTaGTCCTCGAACTACTGGAGCAGGGGTTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: CSWENTATSFAG*SSNYWSRGWGL
Trigger: CAGCCCCCAACCCCTGCTCCAGTAGTTCGAGGACCACCCGGCGAAAGAAGTAGCTGTGTTCTCCCAGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS CAA 72 bp GCGATCTCAATTAGGAAGGTGGCCACCACGCTGAGCTaGTGCAGCCAGACCGGCAGGTGGTGTGCGAACCAG +
Preference number: 6 (lower is better)
Translates to: AISIRKVATTLS*CSQTGRWCANQ
Trigger: CTGGTTCGCACACCACCTGCCGGTCTGGCTGCACAAGCTCAGCGTGGTGGCCACCTTCCTAATTGAGATCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000505981.5
ENST00000514938.1
CDS CCA 72 bp AGAACCAGTACTTGTAGCGCTGGGCTCGGACGTAGGTaGGCGGCTGCTTGTGGAAGGGATACCTGGCCACTT +
Preference number: 6 (lower is better)
Translates to: RTSTCSAGLGRR*AAACGRDTWPL
Trigger: AAGTGGCCAGGTATCCCTTCCACAAGCAGCCGCCCACCTACGTCCGAGCCCAGCGCTACAAGTACTGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000504717.1
CDS GCA 72 bp GCTGCCAGTCAACCTCCAGGCCAAAGTAGTGCACAGTaGCATAGGCCAGAAGCCCGTAGACGGCTAGTTCCA +
Preference number: 6 (lower is better)
Translates to: AASQPPGQSSAQ*HRPEARRRLVP
Trigger: TGGAACTAGCCGTCTACGGGCTTCTGGCCTATGGCACTGTGCACTACTTTGGCCTGGAGGTTGACTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216080.5
ENST00000474879.7
ENST00000514938.1