RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMBR1L (Homo sapiens)

Ensembl gene IDs: ENSG00000139636

Ensembl transcript IDs: ENST00000267102.13, ENST00000417750.5, ENST00000457164.6, ENST00000547382.5, ENST00000547670.5, ENST00000547675.5, ENST00000547698.5, ENST00000547813.5, ENST00000548983.1, ENST00000549296.1, ENST00000549429.1, ENST00000549587.1, ENST00000550137.5, ENST00000550815.1, ENST00000550867.5, ENST00000551115.1, ENST00000551143.5, ENST00000551169.5, ENST00000551535.1, ENST00000551782.5, ENST00000551854.5, ENST00000552141.5, ENST00000552153.5, ENST00000552449.1, ENST00000552577.5, ENST00000552879.5, ENST00000553040.5, ENST00000553204.5

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCCACCCCCAGCTGGAGGTCACTGGTGCTGGGTCTTCCTAGATaGCTGGGGGAAACCGGAGACGGGCAGCGGCAGTCTGTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: LPTPSWRSLVLGLPR*LGETGDGQRQSVQP
Trigger: GGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGGGGGTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR CCA 90 bp CCACCCCCAGCTGGAGGTCACTGGTGCTGGGTCTTCCTAGATGCCTaGGGGAAACCGGAGACGGGCAGCGGCAGTCTGTCCAGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: PPPAGGHWCWVFLDA*GKPETGSGSLSSPK
Trigger: CTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR GCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTaGCCTGGCCCAGTCCTTTCCCTGCCCCTACCCCACCCTATTGCA +
Preference number: 1 (lower is better)
Translates to: ALLGQRQGRQSISRA*PGPVLSLPLPHPIA
Trigger: TGCAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR GCA 90 bp CAACTGAGGACACCATTAGGTAAGGTGGGAGGGCAGCCTGGTACCTaGATGCCTCGGGGCATGGCAGCCTCATCGATGAGCAGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: QLRTPLGKVGGQPGT*MPRGMAASSMSSSR
Trigger: CCTGGAGCTGCTCATCGATGAGGCTGCCATGCCCCGAGGCATGCAGGTACCAGGCTGCCCTCCCACCTTACCTAATGGTGTCCTCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547670.5
3UTR CCA 90 bp GGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTaGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTG +
Preference number: 1 (lower is better)
Translates to: GGPKPLQDSTVLRLC*ARGKGDNLSPEPAL
Trigger: CAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR TCA 90 bp AGTAGGATTACAGATCCTGCGGGTCAGGGCTGCCTCCTCAAAGGCTaGGCAGTACAGCTGCTCCTCCAGGTCTTCCAGCAGCCGGGGCTT +
Preference number: 1 (lower is better)
Translates to: SRITDPAGQGCLLKG*AVQLLLQVFQQPGL
Trigger: AAGCCCCGGCTGCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
3UTR GCA 90 bp TCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCC +
Preference number: 1 (lower is better)
Translates to: SGGPKPLQDSTVLRL*WARGKGDNLSPEPA
Trigger: GGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR GCA 90 bp CAGTCTGTCCAGCCCAAAGGCCCGGATCAGCTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: QSVQPKGPDQLCPHS*SEGLHQTECGEACK
Trigger: TTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTGGACAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR TCA 90 bp CCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTaGGGAGCATCAACATCACCACTGTCTCATAGACCCGGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: PQWLMPPTPYLAPAE*GASTSPLSHRPGPG
Trigger: TCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
3UTR GCA 90 bp CTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTaGCACCCACCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCC +
Preference number: 1 (lower is better)
Translates to: LWLRLCNSADGSAPL*HPPSQIPGPEVQVA
Trigger: GGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGGTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR GCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTaGTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTC +
Preference number: 1 (lower is better)
Translates to: PLVFQVVQSPSRIAQ*LGSAGPEARETIYL
Trigger: GAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR CCA 90 bp AGACACAGTTCCCAATTATCTGCGTCATGGCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGAAGCCCACAA +
Preference number: 1 (lower is better)
Translates to: RHSSQLSASWQCRAI*AAGSGRVESYRSPQ
Trigger: TTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATAATTGGGAACTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR GCA 90 bp CACAGCTGCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTGCCCAG +
Preference number: 1 (lower is better)
Translates to: HSCSEGLHQTECGEA*KGCVVEEHNVEIAQ
Trigger: CTGGGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR CCA 90 bp GCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGC +
Preference number: 1 (lower is better)
Translates to: ATVKYGKAGGPGPKL*LRLCNSADGSAPLC
Trigger: GCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR GCA 90 bp AGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAATGTAGAAATTGCCCAGCCAGTTGAA +
Preference number: 1 (lower is better)
Translates to: SEGLHQTECGEACKG*VVEEHNVEIAQPVE
Trigger: TTCAACTGGCTGGGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR TCA 90 bp ATCAAATCATGTAAACATGGCTATGGGGATGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAACAGATTTGGGATCAGGGGCTAGAC +
Preference number: 1 (lower is better)
Translates to: IKSCKHGYGDGPEQQ*GRLMCKQIWDQGLD
Trigger: GTCTAGCCCCTGATCCCAAATCTGTTTACACATCAATCTGCCTCACTGCTGTTCTGGGCCATCCCCATAGCCATGTTTACATGATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp GGGGAAACCGGAGACGGGCAGCGGCAGTCTGTCCAGCCCAAAGGCCCGGATCAGCCAGACAGAGTGTGGTaGGGCCTGCAAAGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: GETGDGQRQSVQPKGPDQPDRVW*GLQRLR
Trigger: ACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGG...CTGATCCGGGCCTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTCCCGAGCCTGCCCTaGCCCAGTCCTTTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGLPSLP*PSPFPA
Trigger: GGCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAG...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGCTAGCAGCTTCCCAGTaGCGGAGAACATGCGGGCGA +
Preference number: 2 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGELAASQ*RRTCGR
Trigger: TCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAG...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR TCA 90 bp TATCTGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: YLRHGSVVPSGPQAPEEWVPLPG*SLPPLL
Trigger: GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC...CCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR GCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGGCCCAGTCCTTTCCCTaGCCCTACCCCACCCTATTG +
Preference number: 2 (lower is better)
Translates to: SPSRIAQCLGSAGPEAREAQSFP*PYPTLL
Trigger: CAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGC...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp GCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTCCGTTGCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 2 (lower is better)
Translates to: ARQHQQAQHSQGVAQVPLLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...CAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR TCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PEARETIYLPSLPWPSPFVPLPG*SLPPLL
Trigger: GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR GCA 90 bp AGACAGGCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: RQARQHQQAQHSQGVAQVTVLRL*WARGKG
Trigger: TCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGT...AACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CCA 90 bp CAGCCCAAAGGCCCGGATCAGCTCTGCCCGCACAGCTGCAGTGAAGGTCTTCACAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 2 (lower is better)
Translates to: QPKGPDQLCPHSCSEGLHRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...GTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR CAA 90 bp TGCCACCCACCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTAGGCAGCAGATGGCAGTGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: CHPPSQIPGPEVQVA*GFPPGLGSRWQCPV
Trigger: AACTGGACACTGCCATCTGCTGCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGGTGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR GCA 90 bp TGCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGGGCAGCCTGGTACCTaGATGCCTCGGGGCATGGCA +
Preference number: 2 (lower is better)
Translates to: CSEGLHQTECGEACKGCVGQPGT*MPRGMA
Trigger: TGCCATGCCCCGAGGCATGCAGGTACCAGGCTGCCC...AACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547670.5
3UTR-3UTR CCA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGAAAAGCAGGAGGTCCTaGTCCCAAACTCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGEKSRRS*SQTLAQ
Trigger: CTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTT...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CCA 90 bp GCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGAAGCCCACAACTGCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: AIWAAGSGRVESYRSPQLPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...CAGTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR TCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKSDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAA +
Preference number: 2 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGEGPEQQ*GRLMCK
Trigger: TTTACACATCAATCTGCCTCACTGCTGTTCTGGGCC...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CCA 90 bp GATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAGGCCAAAAGCAGGAGGTCCTaGTCCCAAACTCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: DLGSGARPSHPALPHAEAKSRRS*SQTLAQ
Trigger: CTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTT...GGCCTCAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR CCA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGTGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 2 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGECSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CCA 90 bp CCCAGCCAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCCAGGCTCCGGAAGAGTaGAGAGCTATAGAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: PSQLKRPKSPSRSKRVSPQAPEE*RAIEAH
Trigger: GTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTG...GGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR CAA 90 bp TGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTAGGCAGCAGATGGCAGTGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: CLGSSQIPGPEVQVA*GFPPGLGSRWQCPV
Trigger: AACTGGACACTGCCATCTGCTGCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGAGCCTAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553040.5
3UTR-3UTR GCA 90 bp AGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGAGAGAAGACAGGAAGTGCTGAGGCTGAGCAGTACAGCTaGTCCTCCAGGTCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SRSKRVSPRVREKTGSAEAEQYS*SSRSSS
Trigger: GCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGC...CTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CCA 90 bp CAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: QLKRPKSPSRSKRVSPRVPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...AACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR TCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQSDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
3UTR-3UTR TCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGSDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
3UTR-3UTR TCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCTTTATTGCTGATGGCTaGAGCCTCCTCCTCCCTATC +
Preference number: 2 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGFIADG*SLLLPI
Trigger: GATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAA...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 2 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDSSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAA +
Preference number: 2 (lower is better)
Translates to: AQCLGSAGPEARETIYLPGPEQQ*GRLMCK
Trigger: TTTACACATCAATCTGCCTCACTGCTGTTCTGGGCC...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR CCA 90 bp TGCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCGTTCCTTGGTCTTTCAGGTaGTCCAAAGCCCCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: CSEGLHQTECGEACKGCVPWSFR*SKAPPG
Trigger: TCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGG...AACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR TCA 90 bp CCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCATCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PCSCPQWLMPPTPYLAPASDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR TCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAATCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKSDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp GCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: AVEPLDVVVPRQGEQHLIRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...AATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
3UTR-3UTR TCA 90 bp TTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACACACCAGGAGCCCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: FPVTENMRARPSGVHTRSPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...GCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
3UTR-3UTR TCA 90 bp GCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAATTATCTGCGTCATGGCATGTGGATGGCCACAATaGGCACAGACAGGCCCGTCA +
Preference number: 2 (lower is better)
Translates to: AELRTRRQTQFPIICVMACGWPQ*AQTGPS
Trigger: TGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACA...TGCCATGACGCAGATAATTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR GCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTCTGGCTCAGATTATaGAATAGTGCAGATGGCTCT +
Preference number: 2 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGLWLRL*NSADGS
Trigger: AGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR GCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCCCTACCCCACCCTATTaGACATCAAATCATGTAAAC +
Preference number: 2 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCPTPPY*TSNHVN
Trigger: GTTTACATGATTTGATGTGCAATAGGGTGGGGTAGG...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR GCA 90 bp TGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 2 (lower is better)
Translates to: CSCPQWLMPPTPYLAPAESTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...CTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
3UTR-3UTR CCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGT +
Preference number: 2 (lower is better)
Translates to: PEARETIYLPSLPWPSPFPGPKL*LRLCNS
Trigger: ACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGG...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR CCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGATGTGTAAACAGATTTaGGATCAGGGGCTAGACCCA +
Preference number: 2 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKMCKQI*DQGLDP
Trigger: TGGGTCTAGCCCCTGATCCCAAATCTGTTTACACAT...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp AGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: STQGNCQGKGAQLERNLVRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...AACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
3UTR-3UTR TCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 2 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVSSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp TGCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCGTTAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: CSEGLHQTECGEACKGCVSPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...AACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR GCA 90 bp TTGACTAGCAGCTTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACTCTGGCTCAGATTATaGAATAGTGCAGATGGCTCT +
Preference number: 2 (lower is better)
Translates to: LTSSFPVTENMRARPSGVLWLRL*NSADGS
Trigger: AGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG...TACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACAAAAGCAGGAGGTCCTaGTCCCAAACTCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYKSRRS*SQTLAQ
Trigger: CTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTT...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR CCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGATGTGTAAACAGATTTaGGATCAGGGGCTAGACCCA +
Preference number: 2 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVMCKQI*DQGLDP
Trigger: TGGGTCTAGCCCCTGATCCCAAATCTGTTTACACAT...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLARAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
3UTR-3UTR TCA 90 bp AAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTACGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 2 (lower is better)
Translates to: KNKVPEAMDEGAVEPLDVRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...TACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
3UTR-3UTR TCA 90 bp GTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTGCTTTGATATCCCAGAATTaGGTAGTCCACTTCTGTGCG +
Preference number: 2 (lower is better)
Translates to: VEPLDVVVPRQGEQHLIALISQN*VVHFCA
Trigger: CGCACAGAAGTGGACTACTCAATTCTGGGATATCAA...AGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
3UTR-3UTR GCA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 2 (lower is better)
Translates to: ECGEACKGCVVEEHNVEISTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CCA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTACCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGT +
Preference number: 2 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLPGPKL*LRLCNS
Trigger: ACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGG...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 2 (lower is better)
Translates to: RIAQCLGSAGPEARETIYSSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR TCA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAAAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR GCA 90 bp GAGCATCAACATCACCACTGTCTCATAGACCCGGCCCAGGACACCCTTTCTGGACATTCATCCAGCAGTTaGTCACTTCAGGTTCACAAA +
Preference number: 2 (lower is better)
Translates to: EHQHHHCLIDPAQDTLSGHSSSS*SLQVHK
Trigger: TTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATG...TCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
3UTR-3UTR CCA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 2 (lower is better)
Translates to: ECGEACKGCVVEEHNVEISSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR GCA 90 bp TGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGCCTACCCCACCCTATTaGACATCAAATCATGTAAAC +
Preference number: 2 (lower is better)
Translates to: CSCPQWLMPPTPYLAPAEPTPPY*TSNHVN
Trigger: GTTTACATGATTTGATGTGCAATAGGGTGGGGTAGG...CTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CCA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAAAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQRVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR TCA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: ECGEACKGCVVEEHNVEIKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR GCA 90 bp TCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTCATTCATCCAGCAGTTaGTCACTTCAGGTTCACAAA +
Preference number: 2 (lower is better)
Translates to: SLLALFLSTMADATHTIPHSSSS*SLQVHK
Trigger: TTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATG...AGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
3UTR GCA 72 bp CCCAGCTGGAGGTCACTGGTGCTGGGTCTTCCTAGATaGCTGGGGGAAACCGGAGACGGGCAGCGGCAGTCT +
Preference number: 3 (lower is better)
Translates to: PSWRSLVLGLPR*LGETGDGQRQS
Trigger: AGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CAA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGEEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR GCA 72 bp CGGCAGTCTGTCCAGCCCAAAGGCCCGGATCAGCTCTaGCCGCACAGCTGCAGTGAAGGTCTTCACCAGACA +
Preference number: 3 (lower is better)
Translates to: RQSVQPKGPDQL*PHSCSEGLHQT
Trigger: TGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTGGACAGACTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR CCA 72 bp ACGGCACCAAAGGAGCCCAGCTTGGAGAAGGAGACCTaGCCTAAGGAGGTACCCTGCATGCCTCGGGGCATG +
Preference number: 3 (lower is better)
Translates to: TAPKEPSLEKET*PKEVPCMPRGM
Trigger: CATGCCCCGAGGCATGCAGGGTACCTCCTTAGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGGTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR GCA 72 bp CAGCCCAAAGGCCCGGATCAGCTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAG +
Preference number: 3 (lower is better)
Translates to: QPKGPDQLCPHS*SEGLHQTECGE
Trigger: CTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR GCA 72 bp ACACCATTAGGTAAGGTGGGAGGGCAGCCTGGTACCTaGATGCCTCGGGGCATGGCAGCCTCATCGATGAGC +
Preference number: 3 (lower is better)
Translates to: TPLGKVGGQPGT*MPRGMAASSMS
Trigger: GCTCATCGATGAGGCTGCCATGCCCCGAGGCATGCAGGTACCAGGCTGCCCTCCCACCTTACCTAATGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547670.5
3UTR CCA 72 bp GGCATGGCAGCCTCATCGATGAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACAGACAGGCCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: GMAASSMSSSRM*MATMSTDRPVS
Trigger: GCTGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CAA 90 bp TCCAGCCCAAAGGCCCGGATCAGCTCTGCCCGCACAGCTGCAGTGAAGGTCTTCCTCCTCCCTATCCCCTaGGTCTTTCAGGTGGTCCAA +
Preference number: 3 (lower is better)
Translates to: SSPKARISSARTAAVKVFLLPIP*VFQVVQ
Trigger: TTGGACCACCTGAAAGACCAAGGGGATAGGGAGGAG...GAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR GCA 72 bp GGAGAAGGGCAGGAGCAGGACAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTT +
Preference number: 3 (lower is better)
Translates to: GEGQEQDSTQGN*QGKGAQLERNL
Trigger: AAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
3UTR-3UTR CAA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
3UTR-3UTR CAA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
3UTR-3UTR CAA 90 bp CCAATTATCTGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 3 (lower is better)
Translates to: PIICVMAVSCHLGRRLRKNSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...CTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATAATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
3UTR TCA 72 bp AGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: STVLRLLSDSRS*GPSSLGLPSRP
Trigger: AGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553040.5
3UTR GCA 72 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGAGACAATCTATCTCCC +
Preference number: 3 (lower is better)
Translates to: PKPLQDSTVLRL*WARGKGDNLSP
Trigger: GGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR GCA 72 bp TTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTaGTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACA +
Preference number: 3 (lower is better)
Translates to: FQVVQSPSRIAQ*LGSAGPEARET
Trigger: TGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR GCA 72 bp ACACAGTTCCCAATTATCTGCGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: TQFPIICVMAVS*HLGRRLRKSGE
Trigger: CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATAATTGGGAACTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CAA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR CCA 72 bp TCCCAATTATCTGCGTCATGGCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGA +
Preference number: 3 (lower is better)
Translates to: SQLSASWQCRAI*AAGSGRVESYR
Trigger: TCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATAATTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CAA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: PRAIARVKVHSSSAILLTSSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
3UTR-3UTR CAA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAACCAAAGGAGCCCAGCTaGGAGAAGGAGACCTGGCCT +
Preference number: 3 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQPKEPS*EKETWP
Trigger: AGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGG...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CAA 90 bp CCCAGCCAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCACATTCATCCAGCAGTaGCTCACTTCAGGTTCACAA +
Preference number: 3 (lower is better)
Translates to: PSQLKRPKSPSRSKRVSPTFIQQ*LTSGSQ
Trigger: TTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGT...GGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
3UTR-3UTR CAA 90 bp GTGGAGTACACACCAGGAGCAGCAGAACCCCAAGGAAGGAGATGCATGAGTAGACTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 3 (lower is better)
Translates to: VEYTPGAAEPQGRRCMSRLLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...TCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCTGGTGTGTACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
3UTR CCA 72 bp AGAGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAATaGCTGATGCCACCCACACCATACCTAGCACCAGCA +
Preference number: 3 (lower is better)
Translates to: RVTLCWPCSCPQ*LMPPTPYLAPA
Trigger: TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
3UTR-3UTR CAA 90 bp GGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCCCCTACCCCACCCTATaGCACATCAAATCATGTAAA +
Preference number: 3 (lower is better)
Translates to: GLSGGPKPLQDSTVLRLCPYPTL*HIKSCK
Trigger: TTTACATGATTTGATGTGCAATAGGGTGGGGTAGGG...GCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR-3UTR CAA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCAAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLASSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
3UTR GCA 72 bp TACACACCAGGAGCAGCAGAACCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGAGATAGTACTCCCAAA +
Preference number: 3 (lower is better)
Translates to: YTPGAAEPQGRR*MSRGRGDSTPK
Trigger: TTTGGGAGTACTATCTCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCTGGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
3UTR GCA 72 bp CTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAATGTAGAAATTGCCCAG +
Preference number: 3 (lower is better)
Translates to: LHQTECGEACKG*VVEEHNVEIAQ
Trigger: CTGGGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR TCA 72 bp TGTAGAGGAACACAATGTAGAAATTGCCCAGCCAGTTaGAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAG +
Preference number: 3 (lower is better)
Translates to: CRGTQCRNCPAS*SVQSHPAGQSE
Trigger: CTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTCTACATTGTGTTCCTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR GCA 72 bp AGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAGGAACACAATGTAGAA +
Preference number: 3 (lower is better)
Translates to: SEGLHQTECGEA*KGCVVEEHNVE
Trigger: TTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
3UTR-3UTR CAA 90 bp TCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTACATTCATCCAGCAGTaGCTCACTTCAGGTTCACAA +
Preference number: 3 (lower is better)
Translates to: SLLALFLSTMADATHTIPTFIQQ*LTSGSQ
Trigger: TTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGT...AGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
3UTR CCA 72 bp AAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGTGCAGATGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: KYGKAGGPGPKL*LRLCNSADGSA
Trigger: AGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTTCCATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
3UTR CCA 72 bp GATAGTACTCCCAAAAGTCATAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAATGGCTGATGCCACCC +
Preference number: 3 (lower is better)
Translates to: DSTPKSHRVTLC*PCSCPQWLMPP
Trigger: GGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGGAGTACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
3UTR CCA 72 bp AACTCAGCAGGCTTCTTGAAGCGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTTGCAAACAGAAGTGTT +
Preference number: 3 (lower is better)
Translates to: NSAGFLKRVRKM*QRMYSVANRSV
Trigger: AACACTTCTGTTTGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
3UTR-3UTR CAA 90 bp ACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATA +
Preference number: 3 (lower is better)
Translates to: TLCWPCSCPQWLMPPTPYRGCTV*QTEVLI
Trigger: TATCAACACTTCTGTTTGCAACACTGTACATCCTCT...GTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp GGGGAAACCGGAGACGGGCAGCGGCAGTCTGTCCAGCCCAAAGGCCCGGATCAGCTAGCAGCTTCCCAGTaGCGGAGAACATGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GETGDGQRQSVQPKGPDQLAASQ*RRTCGR
Trigger: TCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAG...CTGATCCGGGCCTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp AGCAGCTTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACACACCAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: SSFPVTENMRARPSGVHTKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...GGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp AGACAGGCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTCTCCCGAGCCTGCCCTaGCCCAGTCCTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQARQHQQAQHSQGVAQVLPSLP*PSPFPA
Trigger: GGCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAG...AACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGCTCCCGAGCCTGCCCTaGCCCAGTCCTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEARELPSLP*PSPFPA
Trigger: GGCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAG...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCGGCCCGGATCAGCTCTaGCCGCACAGCTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGGPDQL*PHSCSE
Trigger: TTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCC...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GGGGAAACCGGAGACGGGCAGCGGCAGTCTGTCCAGCCCAAAGGCCCGGATCAGCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 4 (lower is better)
Translates to: GETGDGQRQSVQPKGPDQLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...CTGATCCGGGCCTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp TGCCTGGGGGAAACCGGAGACGGGCAGCGGCAGTCTGTCCAGCCCAAAGGCCCGAATTGCCCAGCCAGTTaGAGCGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: CLGETGDGQRQSVQPKGPNCPAS*SVQSHP
Trigger: TGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATT...CGGGCCTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCAGGAGGTACCCTGCATaGCTCGGGGCATGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCRRYPA*LGAWQP
Trigger: AGGCTGCCATGCCCCGAGGCATGCAGGGTACCTCCT...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR GCA 90 bp AGACAGGCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQARQHQQAQHSQGVAQVVMAVS*HLGRRL
Trigger: GAGCCTGCGGCCCAGATGGCACGACACTGCCATGAC...AACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEAREVMAVS*HLGRRL
Trigger: GAGCCTGCGGCCCAGATGGCACGACACTGCCATGAC...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: PRAIARVKVHSSSAILLTKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
CDS-3UTR CCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDQCRAI*AAGSGR
Trigger: TCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAGGCCCTTCCCACCCCCAGCTaGAGGTCACTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DLGSGARPSHPALPHAEALPTPS*RSLVLG
Trigger: ACCCAGCACCAGTGACCTCCAGCTGGGGGTGGGAAG...GGCCTCAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTCCGTTGGTGCTTAGGCTCTGCTaGGCCAGAGGCAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ARQHQQAQHSQGVAQVPLVLRLC*ARGKGD
Trigger: GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCAC...CAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR TCA 90 bp TCCAGCCCAAAGGCCCGGATCAGCTCTGCCCGCACAGCTGCAGTGAAGGTCTTCTCTGCTCAGCATGACTaGAGCCGAGGTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSPKARISSARTAAVKVFSAQHD*SRGASG
Trigger: CCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGA...GAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCTAGCAGCTTCCCAGTaGCGGAGAACATGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDLAASQ*RRTCGR
Trigger: TCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTCCGTTGTGGCAGCCTCATCGATaGGCAGCTCCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: ARQHQQAQHSQGVAQVPLWQPHR*AAPGCG
Trigger: TCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCA...CAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGCCAGACAGAGTGTGGTaGGGCCTGCAAAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEAREPDRVW*GLQRLR
Trigger: ACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGG...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGAAGCCCACAACTGCAGCCAGGTACCCTCTaGAGCCCTGGGAGGACCACT +
Preference number: 4 (lower is better)
Translates to: AIWAAGSGRVESYRSPQLQPGTL*SPGRTT
Trigger: AGTGGTCCTCCCAGGGCTTCAGAGGGTACCTGGCTG...CAGTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR GCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCAGGAGGTACCCTGCATaGCTCGGGGCATGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFRRYPA*LGAWQP
Trigger: AGGCTGCCATGCCCCGAGGCATGCAGGGTACCTCCT...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCCAGCCAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSQLKRPKSPSRSKRVSPVMAVS*HLGRRL
Trigger: GAGCCTGCGGCCCAGATGGCACGACACTGCCATGAC...GGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp GCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTCCGTTGCTGGGTCTTCCTAGATaGCTGGGGGAAACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: ARQHQQAQHSQGVAQVPLLGLPR*LGETGD
Trigger: GTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAG...CAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCGCTGGAGGTCACTGGTaGTGGGTCTTCCTAGATGCC +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGAGGHW*WVFLDA
Trigger: GGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGC...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACGCCCAGTCCTTTCCCTaGCCCTACCCCACCCTATTG +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDAQSFP*PYPTLL
Trigger: CAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGC...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGTVLRL*WARGKG
Trigger: TCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGT...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: STQGNCQGKGAQLERNLVKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...AACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
CDS-3UTR CCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCGCGGGCGAGACCCAGTaGAGTACACACCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGAGETQ*STHQEQ
Trigger: CTGCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGC...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGQCRAI*AAGSGR
Trigger: TCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTG...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFQCRAI*AAGSGR
Trigger: TCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTG...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTACTCCCGAGCCTGCCCTaGCCCAGTCCTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLLPSLP*PSPFPA
Trigger: GGCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAG...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGGTGCTTAGGCTCTGCTaGGCCAGAGGCAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEAREVLRLC*ARGKGD
Trigger: GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCAC...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp AGGCAGCCAGCAGGAAGTAGGATTACAGATCCTGCGGGTCAGGGCTGCCTCCTCGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RQPAGSRITDPAGQGCLLVPLPG*SLPPLL
Trigger: GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC...GAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCCCCGCACAGCTGCAGTaGAGGTCTTCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCPAQLQ*RSSPDR
Trigger: TCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGG...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCGCTGAGCAGTACAGCTaGTCCTCCAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCAEQYS*SSRSSS
Trigger: GCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGC...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGECGEA*KGCVVE
Trigger: CTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp GATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAGGCCCTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: DLGSGARPSHPALPHAEALCPHS*SEGLHQ
Trigger: CTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAG...GGCCTCAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDTVLRL*WARGKG
Trigger: TCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGT...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: RKTRFQRPWMREPLSHWMKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...CATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
CDS-3UTR CCA 90 bp TGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CLGSAGPEARETIYLPSLQCRAI*AAGSGR
Trigger: TCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTG...CAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGTCTTCCTAGATGCCTaGGGGAAACCGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: EARETIYLPSLPWPSPFPVFLDA*GKPETG
Trigger: GCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGAC...AGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCGTCTTCCTAGATGCCTaGGGGAAACCGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFVFLDA*GKPETG
Trigger: GCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGAC...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGCTGGAGGTCACTaGTGCTGGGTCTTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGPAGGH*CWVFLD
Trigger: ATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGG...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCGTGCTTAGGCTCTGCTaGGCCAGAGGCAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGVLRLC*ARGKGD
Trigger: GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCAC...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp ATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCAACGGTGGGAGGGCAGCCTaGTACCTGCATGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MADATHTIPSTSRVRSINGGRAA*YLHASG
Trigger: CCCCGAGGCATGCAGGTACCAGGCTGCCCTCCCACC...GTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp TGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGTCTGCTCAGCATGACTaGAGCCGAGGTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CLGSAGPEARETIYLPSLSAQHD*SRGASG
Trigger: CCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGA...CAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAGGCCATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: DLGSGARPSHPALPHAEAILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...GGCCTCAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp TATCTGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 4 (lower is better)
Translates to: YLRHGSVVPSGPQAPEEWLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...CCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp AGGTCTTCCAGCAGCCGGGGCTTGACTAGCAGCTTCCCAGTGACGGAGAACATGCTAGCAGCTTCCCAGTaGCGGAGAACATGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: RSSSSRGLTSSFPVTENMLAASQ*RRTCGR
Trigger: TCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAG...CATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR TCA 90 bp TGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CLGSAGPEARETIYLPSLVPLPG*SLPPLL
Trigger: GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC...CAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCTGTGGATGGCCACAATaGGCACAGACAGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGCGWPQ*AQTGPS
Trigger: TGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACA...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACTGGCAGCCTCATCGATaGGCAGCTCCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: EGAVEPLDVVVPRQGEQHWQPHR*AAPGCG
Trigger: TCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCA...GTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTTGGCAGCCTCATCGATaGGCAGCTCCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: EARETIYLPSLPWPSPFPWQPHR*AAPGCG
Trigger: TCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCA...AGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp GCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGAAGCCCACAACTGCCCGCACAGCTGCAGTaGAGGTCTTCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: AIWAAGSGRVESYRSPQLPAQLQ*RSSPDR
Trigger: TCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGG...CAGTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCSDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEARESDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVVMAVS*HLGRRL
Trigger: GAGCCTGCGGCCCAGATGGCACGACACTGCCATGAC...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR GCA 90 bp AGACAGGCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: RQARQHQQAQHSQGVAQVECGEA*KGCVVE
Trigger: CTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC...AACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp CAGTCATCAGGGAGGTCTCTGGTCCTGGCTGTGGAAGCACTAGGAGAGGAGATGGGCCCGGATCAGCTCTaGCCGCACAGCTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QSSGRSLVLAVEALGEEMGPDQL*PHSCSE
Trigger: TTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCC...CATCTCCTCTCCTAGTGCTTCCACAGCCAGGACCAGAGACCTCCCTGATGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGGCCCGGATCAGCTCTaGCCGCACAGCTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSSQIPGPEGPDQL*PHSCSE
Trigger: TTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCC...CTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR GCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCTGGGTCTTCCTAGATaGCTGGGGGAAACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFLGLPR*LGETGD
Trigger: GTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAG...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAAAGCCGAGGTGCCTCTaGGCCCGGGGAGGACGAGCG +
Preference number: 4 (lower is better)
Translates to: KNKVPEAMDEGAVEPLDVKPRCL*ARGGRA
Trigger: CGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTT...TACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
CDS-3UTR CCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp TTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACACACCAGGAGCCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPVTENMRARPSGVHTRSPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...GCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGQCRAI*AAGSGR
Trigger: TCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTG...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCGGAGGTCACTGGTGCTaGGTCTTCCTAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGGGHWC*VFLDAW
Trigger: CCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCC...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCCAGCTGGAGGTCACTaGTGCTGGGTCTTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDPAGGH*CWVFLD
Trigger: ATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCATCAACATCACCACTGTCTCATAGACCCGGCCCAGGACACCCTTTCTGGAGCCTTCCCACCCCCAGCTaGAGGTCACTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASTSPLSHRPGPGHPFWSLPTPS*RSLVLG
Trigger: ACCCAGCACCAGTGACCTCCAGCTGGGGGTGGGAAG...GCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp ATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTACTCCCGAGCCTGCCCTaGCCCAGTCCTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IPLVFQVVQSPSRIAQCLLPSLP*PSPFPA
Trigger: GGCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAG...TAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGGTGCTTAGGCTCTGCTaGGCCAGAGGCAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPVLRLC*ARGKGD
Trigger: GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCAC...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp TTGACTAGCAGCTTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTATCTGCTCAGCATGACTaGAGCCGAGGTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTSSFPVTENMRARPSGVSAQHD*SRGASG
Trigger: CCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGA...TACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR TCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCTAGCACCAGCAGAGTaGGGAGCATCAACATCACCA +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDLAPAE*GASTSP
Trigger: TGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGGTGGCCCAGACAGAGTGTGGTaGGGCCTGCAAAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GNCQGKGAQLERNLVDGGPDRVW*GLQRLR
Trigger: ACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGG...GCCACCGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCCCAGACAGAGTGTGGTaGGGCCTGCAAAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLLSDSRSPDRVW*GLQRLR
Trigger: ACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGG...GGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR TCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCTCAGATTCCAGGTCCTaGGGTCCAAGTAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGSDSRS*GPSSLG
Trigger: CCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGA...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR GCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCGCGCTCACGTTTCAATaGAAACACCCGCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGALTFQ*KHPPLG
Trigger: GCCTAGTGGCGGGTGTTTGCATTGAAACGTGAGCGC...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR GCA 90 bp GAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACGCGCTCACGTTTCAATaGAAACACCCGCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: EGAVEPLDVVVPRQGEQHALTFQ*KHPPLG
Trigger: GCCTAGTGGCGGGTGTTTGCATTGAAACGTGAGCGC...GTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000549296.1
CDS-3UTR GCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCCTTTCCTCGCAGCCTaGGACAGAAACTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVPFLAA*DRNSGQ
Trigger: CTGCCCCGAGTTTCTGTCGCAGGCTGCGAGGAAAGG...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR GCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTACCTTTCCTCGCAGCCTaGGACAGAAACTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLPFLAA*DRNSGQ
Trigger: CTGCCCCGAGTTTCTGTCGCAGGCTGCGAGGAAAGG...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR GCA 90 bp AGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGAGAGAAGACAGGAAGTGCTGAGCCTTTCCTCGCAGCCTaGGACAGAAACTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRSKRVSPRVREKTGSAEPFLAA*DRNSGQ
Trigger: CTGCCCCGAGTTTCTGTCGCAGGCTGCGAGGAAAGG...CTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR GCA 90 bp ATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCCTTTCCTCGCAGCCTaGGACAGAAACTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MDEGAVEPLDVVVPRQGEPFLAA*DRNSGQ
Trigger: CTGCCCCGAGTTTCTGTCGCAGGCTGCGAGGAAAGG...CTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000549296.1
CDS-3UTR GCA 90 bp GCCCGTCAGCACCAGCAAGCACAGCATAGCCAGGGGGTAGCCCAGGTTCCGTTGCACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ARQHQQAQHSQGVAQVPLHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...CAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp AGGCAGCCAGCAGGAAGTAGGATTACAGATCCTGCGGGTCAGGGCTGCCTCCTCAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: RQPAGSRITDPAGQGCLLSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...GAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp GAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: EGAVEPLDVVVPRQGEQHSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...GTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
ENST00000550815.1
ENST00000551169.5
CDS-3UTR GCA 90 bp GTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGGCTGAGCAGTACAGCTaGTCCTCCAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VEASKVTQQVKASEPQGSAEQYS*SSRSSS
Trigger: GCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGC...CGAACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGGCCCAGTCCTTTCCCTaGCCCTACCCCACCCTATTG +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQAQSFP*PYPTLL
Trigger: CAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGC...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGTCCAGGATAGCACAGTaGTTAGGCTCTGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKSRIAQ*LGSAGP
Trigger: TGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGA...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCAAACTCGGGGCAGTCTaGGGCTCAGATACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGKLGAV*GSDTVV
Trigger: GACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTT...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR CCA 90 bp GAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: EAMDEGAVEPLDVVVPRQRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...CTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
ENST00000551169.5
CDS-3UTR CCA 90 bp AGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGCGGGCGAGACCCAGTaGAGTACACACCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: STQGNCQGKGAQLERNLVAGETQ*STHQEQ
Trigger: CTGCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGC...AACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp GATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAGGCCAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 4 (lower is better)
Translates to: DLGSGARPSHPALPHAEASSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...GGCCTCAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACACACCAGGAGCCAAAGGAGCCCAGCTTaGAGAAGGAGACCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: FPVTENMRARPSGVHTRSQRSPA*RRRPGL
Trigger: TAGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTG...GCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGGTCTTCCTAGATGCCTaGGGGAAACCGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQVFLDA*GKPETG
Trigger: GCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGAC...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGTCTTCCTAGATGCCTaGGGGAAACCGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSSQIPGPEVFLDA*GKPETG
Trigger: GCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGAC...CTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR CCA 90 bp CCCAGCCAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCCCAGCTGGAGGTCACTaGTGCTGGGTCTTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: PSQLKRPKSPSRSKRVSPPAGGH*CWVFLD
Trigger: ATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGG...GGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCCCAGCTGGAGGTCACTaGTGCTGGGTCTTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGPAGGH*CWVFLD
Trigger: ATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGG...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCACTTCCCACCCCCAGCTaGAGGTCACTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSGGPKPLQDSTVLRLLSLPTPS*RSLVLG
Trigger: ACCCAGCACCAGTGACCTCCAGCTGGGGGTGGGAAG...TGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR CCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGCCTTGGTCTTTCAGGTaGTCCAAAGCCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKPWSFR*SKAPPG
Trigger: TCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGG...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AGCTGCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCGGGAGGACCACTCACTaGGGAAACCCCGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: SCSEGLHQTECGEACKGCGRTTH*GNPGMA
Trigger: AGCCATTCCGGGGTTTCCCCAGTGAGTGGTCCTCCC...GCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGESPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGCTAGCACCAGCAGAGTaGGGAGCATCAACATCACCA +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKLAPAE*GASTSP
Trigger: TGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAG...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp ACAGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTGTGGATGGCCACAATaGGCACAGACAGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TAPRAIARVKVHSSSAILCGWPQ*AQTGPS
Trigger: TGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACA...CAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTGTGGATGGCCACAATaGGCACAGACAGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: AVKVFTRQSVVRPAKAALCGWPQ*AQTGPS
Trigger: TGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACA...CAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTGTGGATGGCCACAATaGGCACAGACAGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGCGWPQ*AQTGPS
Trigger: TGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACA...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR TCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGGCAGCCTCATCGATaGGCAGCTCCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQWQPHR*AAPGCG
Trigger: TCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCA...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR TCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGCCCGCACAGCTGCAGTaGAGGTCTTCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLPAQLQ*RSSPDR
Trigger: TCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGG...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGCCCGCACAGCTGCAGTaGAGGTCTTCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQPAQLQ*RSSPDR
Trigger: TCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGG...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR TCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCGPEQQ*GRLMCK
Trigger: TTTACACATCAATCTGCCTCACTGCTGTTCTGGGCC...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACGCTCTGTCCTCCCTTTaGTCCCCACTCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: EGAVEPLDVVVPRQGEQHALSSL*SPLFKV
Trigger: GACCTTAAAGAGTGGGGAGCAAAGGGAGGACAGAGC...GTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000549296.1
CDS-3UTR GCA 90 bp ACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCCCTTTCCTCGCAGCCTaGGACAGAAACTCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TMADATHTIPSTSRVRSIPFLAA*DRNSGQ
Trigger: CTGCCCCGAGTTTCTGTCGCAGGCTGCGAGGAAAGG...GATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp GAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: EAMDEGAVEPLDVVVPRQSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...CTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
ENST00000551169.5
CDS-3UTR GCA 90 bp TTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACACACCAGGAGCCCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: FPVTENMRARPSGVHTRSPQGRR*MSRGRG
Trigger: TCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGG...GCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNVMAVS*HLGRRL
Trigger: GAGCCTGCGGCCCAGATGGCACGACACTGCCATGAC...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCEACKG*VVEEHN
Trigger: ATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTC...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTACTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLLCPHS*SEGLHQ
Trigger: CTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAG...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR GCA 90 bp ATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCCGGATCAGCTCTaGCCGCACAGCTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: IPLVFQVVQSPSRIAQCLGPDQL*PHSCSE
Trigger: TTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCC...TAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR GCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCTGGGTCTTCCTAGATaGCTGGGGGAAACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGLGLPR*LGETGD
Trigger: GTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAG...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR GCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCGCTGGAGGTCACTGGTaGTGGGTCTTCCTAGATGCC +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLLSDSRSAGGHW*WVFLDA
Trigger: GGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGC...GGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR GCA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTAGCCCAGTCCTTTCCCTaGCCCTACCCCACCCTATTG +
Preference number: 4 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLAQSFP*PYPTLL
Trigger: CAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGC...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGTVLRL*WARGKG
Trigger: TCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGT...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTACCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGTGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEARECSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKSSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGCAAAGGAGCCCAGCTTaGAGAAGGAGACCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPQRSPA*RRRPGL
Trigger: TAGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTG...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCAAAGGAGCCCAGCTTaGAGAAGGAGACCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: CLGSAGPEARETIYLPSLQRSPA*RRRPGL
Trigger: TAGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTG...CAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CSCPQWLMPPTPYLAPAEQCRAI*AAGSGR
Trigger: TCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTG...CTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCAATTATCTGCGTCATaGCAGTGTCGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDQLSAS*QCRAIW
Trigger: CCAGATGGCACGACACTGCCATGACGCAGATAATTG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCGGAGGTCACTGGTGCTaGGTCTTCCTAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGGGHWC*VFLDAW
Trigger: CCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCC...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGGGAGGTCACTGGTGCTaGGTCTTCCTAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLGGHWC*VFLDAW
Trigger: CCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCC...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTTCCCACCCCCAGCTaGAGGTCACTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKLPTPS*RSLVLG
Trigger: ACCCAGCACCAGTGACCTCCAGCTGGGGGTGGGAAG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGCCTTGGTCTTTCAGGTaGTCCAAAGCCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VEASKVTQQVKASEPQGSPWSFR*SKAPPG
Trigger: TCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGG...CGAACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR TCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCAGGGTTATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QLKRPKSPSRSKRVSPRVILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...AACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: APRAIARVKVHSSSAILLILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...CAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
CDS-3UTR TCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDSPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCATCAACATCACCACTGTCTCATAGACCCGGCCCAGGACACCCTTTCTGGAGCCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 4 (lower is better)
Translates to: ASTSPLSHRPGPGHPFWSLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...GCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp TTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCCTAGCAGCTTCCCAGTaGCGGAGAACATGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LALFLSTMADATHTIPSTLAASQ*RRTCGR
Trigger: TCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAG...GGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR TCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTAGCAGCTTCCCAGTaGCGGAGAACATGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYLAASQ*RRTCGR
Trigger: TCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAG...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGGCAGCCTCATCGATaGGCAGCTCCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLWQPHR*AAPGCG
Trigger: TCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCA...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR TCA 90 bp GCAGGCTTCTTGAAGCGGGTCAGGAAGATGTGGCAGAGGATGTACAGTGTTGCACCAGACAGAGTGTGGTaGGGCCTGCAAAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: AGFLKRVRKMWQRMYSVAPDRVW*GLQRLR
Trigger: ACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGG...TGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp TTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTACACACCAGGAGCTTTATTGCTGATGGCTaGAGCCTCCTCCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: FPVTENMRARPSGVHTRSFIADG*SLLLPI
Trigger: GATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAA...GCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR TCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGGATCAACTTTATTGCTaGTGGCTGAAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEAREDQLYC*WLKPPP
Trigger: AGGAGGAGGCTTCAGCCATCAGCAATAAAGTTGATC...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGCTCTGTCCTCCCTTTaGTCCCCACTCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: EAMDEGAVEPLDVVVPRQALSSL*SPLFKV
Trigger: GACCTTAAAGAGTGGGGAGCAAAGGGAGGACAGAGC...CTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000549296.1
CDS-3UTR GCA 90 bp GAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EGAVEPLDVVVPRQGEQHHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...GTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
ENST00000550815.1
CDS-3UTR GCA 90 bp ATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCAACGCTGAGCAGTACAGCTaGTCCTCCAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MADATHTIPSTSRVRSINAEQYS*SSRSSS
Trigger: GCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGC...GTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp TCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGGAGGTACCCTGCATaGCTCGGGGCATGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLALFLSTMADATHTIPRRYPA*LGAWQP
Trigger: AGGCTGCCATGCCCCGAGGCATGCAGGGTACCTCCT...AGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYVMAVS*HLGRRL
Trigger: GAGCCTGCGGCCCAGATGGCACGACACTGCCATGAC...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLECGEA*KGCVVE
Trigger: CTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp TCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGCCACCCACCTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SGSDYAIVQMALLPSATHLCPHS*SEGLHQ
Trigger: CTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAG...GTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCAGGCCCGGATCAGCTCTaGCCGCACAGCTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLAGPDQL*PHSCSE
Trigger: TTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCC...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCGCTGGAGGTCACTGGTaGTGGGTCTTCCTAGATGCC +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLAGGHW*WVFLDA
Trigger: GGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGC...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR GCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGTCCAGGATAGCACAGTaGTTAGGCTCTGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVSRIAQ*LGSAGP
Trigger: TGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGA...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGAAACTCGGGGCAGTCTaGGGCTCAGATACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVKLGAV*GSDTVV
Trigger: GACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTT...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR CCA 90 bp TCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGCCACCCACCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGSDYAIVQMALLPSATHPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...GTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp ACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TMADATHTIPSTSRVRSIPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...GATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CCA 90 bp TCCAGGTCTTCCAGCAGCCGGGGCTTGACTAGCAGCTTCCCAGTGACGGAGAACTGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: SRSSSSRGLTSSFPVTENCSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...GTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGERVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp GTCCTGGTCCCAAACTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCGCGGGCGAGACCCAGTaGAGTACACACCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VLVPNSGSDYAIVQMALLAGETQ*STHQEQ
Trigger: CTGCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGC...GAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCAGCGGGCGAGACCCAGTaGAGTACACACCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLAAGETQ*STHQEQ
Trigger: CTGCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGC...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCAGGCTCCGGAAGAGTaGAGAGCTATAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVQAPEE*RAIEAH
Trigger: GTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTG...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGCAGGCTCCGGAAGAGTaGAGAGCTATAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQQAPEE*RAIEAH
Trigger: GTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTG...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCAATTATCTGCGTCATaGCAGTGTCGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFQLSAS*QCRAIW
Trigger: CCAGATGGCACGACACTGCCATGACGCAGATAATTG...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TCCAGGTCTTCCAGCAGCCGGGGCTTGACTAGCAGCTTCCCAGTGACGGAGAACCAATTATCTGCGTCATaGCAGTGTCGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SRSSSSRGLTSSFPVTENQLSAS*QCRAIW
Trigger: CCAGATGGCACGACACTGCCATGACGCAGATAATTG...GTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATGTCTTCCTAGATGCCTaGGGGAAACCGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYVFLDA*GKPETG
Trigger: GCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGAC...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGCCAGCTGGAGGTCACTaGTGCTGGGTCTTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQPAGGH*CWVFLD
Trigger: ATCTAGGAAGACCCAGCACCAGTGACCTCCAGCTGG...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp GTCCTGGTCCCAAACTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCTTCCCACCCCCAGCTaGAGGTCACTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLVPNSGSDYAIVQMALLLPTPS*RSLVLG
Trigger: ACCCAGCACCAGTGACCTCCAGCTGGGGGTGGGAAG...GAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGT +
Preference number: 4 (lower is better)
Translates to: ALLGQRQGRQSISRACPGPGPKL*LRLCNS
Trigger: ACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGG...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCCTTGGTCTTTCAGGTaGTCCAAAGCCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGPWSFR*SKAPPG
Trigger: TCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGG...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp TTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCTACCCTCTGAAGCCCTaGGAGGACCACTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: LALFLSTMADATHTIPSTYPLKP*EDHSLG
Trigger: CCCCAGTGAGTGGTCCTCCCAGGGCTTCAGAGGGTA...GGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp GTCCTGGTCCCAAACTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCTCTGCTCAGCATGACTaGAGCCGAGGTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLVPNSGSDYAIVQMALLSAQHD*SRGASG
Trigger: CCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGA...GAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAATCTGCTCAGCATGACTaGAGCCGAGGTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQSAQHD*SRGASG
Trigger: CCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGA...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGCTAGCACCAGCAGAGTaGGGAGCATCAACATCACCA +
Preference number: 4 (lower is better)
Translates to: AVKVFTRQSVVRPAKAALLAPAE*GASTSP
Trigger: TGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAG...CAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYVPLPG*SLPPLL
Trigger: GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATTGTGGATGGCCACAATaGGCACAGACAGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYCGWPQ*AQTGPS
Trigger: TGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACA...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTGGCAGCCTCATCGATaGGCAGCTCCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNWQPHR*AAPGCG
Trigger: TCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCA...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCAAGATGAGTACAACCTaGATGACGGCACCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFKMSTT*MTAPKE
Trigger: CTCCTTTGGTGCCGTCATTCAGGTTGTACTCATCTT...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR TCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCAGACAGAGTGTGGTaGGGCCTGCAAAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYPDRVW*GLQRLR
Trigger: ACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGG...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCACCCGCACAGCTGCAGTaGAGGTCTTCACCAGACAGA +
Preference number: 4 (lower is better)
Translates to: PCSCPQWLMPPTPYLAPAPAQLQ*RSSPDR
Trigger: TCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGG...TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSAGPEARESSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp TATCTGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: YLRHGSVVPSGPQAPEEWSSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...CCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR TCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGTTTATTGCTGATGGCTaGAGCCTCCTCCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPFIADG*SLLLPI
Trigger: GATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAA...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGATCAACTTTATTGCTaGTGGCTGAAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKDQLYC*WLKPPP
Trigger: AGGAGGAGGCTTCAGCCATCAGCAATAAAGTTGATC...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CAGGTTGGAGAAGAGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTAAACCCCGGAATGGCTaGGAGGCTGGGAACCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVGEEKNKVPEAMDEGAVKPRNG*EAGNPA
Trigger: TGCTGGGTTCCCAGCCTCTCAGCCATTCCGGGGTTT...AACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCTCTTCTCCAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR GCA 90 bp ATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCAACGCGCTCACGTTTCAATaGAAACACCCGCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: MADATHTIPSTSRVRSINALTFQ*KHPPLG
Trigger: GCCTAGTGGCGGGTGTTTGCATTGAAACGTGAGCGC...GTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGGCTCTGTCCTCCCTTTaGTCCCCACTCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQALSSL*SPLFKV
Trigger: GACCTTAAAGAGTGGGGAGCAAAGGGAGGACAGAGC...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR GCA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTAAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGCCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRAIARVKVHSSSAILLTPQGRR*MSRGRG
Trigger: TCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGG...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR GCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVPQGRR*MSRGRG
Trigger: TCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGG...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp AGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGAGAGAAGACAGGAAGTGCTGAGCCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SRSKRVSPRVREKTGSAEPQGRR*MSRGRG
Trigger: TCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGG...CTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATGCTGAGCAGTACAGCTaGTCCTCCAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYAEQYS*SSRSSS
Trigger: GCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGC...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp AGGTCTTCCAGCAGCCGGGGCTTGACTAGCAGCTTCCCAGTGACGGAGAACATGGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: RSSSSRGLTSSFPVTENMEACKG*VVEEHN
Trigger: ATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTC...CATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp TTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGCTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: FLSTMADATHTIPSTSRVLCPHS*SEGLHQ
Trigger: CTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAG...CACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTGGGTCTTCCTAGATaGCTGGGGGAAACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKLGLPR*LGETGD
Trigger: GTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAAGCTGGAGGTCACTGGTaGTGGGTCTTCCTAGATGCC +
Preference number: 4 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKAGGHW*WVFLDA
Trigger: GGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGC...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp TTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCGCTGGAGGTCACTGGTaGTGGGTCTTCCTAGATGCC +
Preference number: 4 (lower is better)
Translates to: LALFLSTMADATHTIPSTAGGHW*WVFLDA
Trigger: GGCATCTAGGAAGACCCAGCACCAGTGACCTCCAGC...GGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCTCTGGCTCAGATTATaGAATAGTGCAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDLWLRL*NSADGS
Trigger: AGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTCCAGGATAGCACAGTaGTTAGGCTCTGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLSRIAQ*LGSAGP
Trigger: TGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGA...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAAAGATGAGTACAACCTaGATGCCTCGGGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLKMSTT*MPRGMA
Trigger: TGCCATGCCCCGAGGCATGCAGGTTGTACTCATCTT...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547382.5
ENST00000553040.5
CDS-3UTR CCA 90 bp GTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTGCTTCGCGGATCCTCTCGTaGAATAGCTGTTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: VEPLDVVVPRQGEQHLIASRILS*NSCSRT
Trigger: CGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGA...AGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
CDS-3UTR CCA 90 bp ATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: IPLVFQVVQSPSRIAQCLRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...TAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp AGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RKTRFQRPWMREPLSHWMRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...CATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
ENST00000551169.5
CDS-3UTR CCA 90 bp AACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTAAGGTTCCAGAGGCCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: NKVPEAMDEGAVEPLDVVRFQRP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCT...TACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
ENST00000551169.5
CDS-3UTR CCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLSSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGSSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLLSDSRSSSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...GGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR CCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCAGGCTCCGGAAGAGTaGAGAGCTATAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLQAPEE*RAIEAH
Trigger: GTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTG...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp ATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCGGAGGTCACTGGTGCTaGGTCTTCCTAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: IAQCLGSSQIPGPEVQVAGGHWC*VFLDAW
Trigger: CCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCC...GGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR CCA 90 bp GGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCAAAAGCAGGAGGTCCTaGTCCCAAACTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSGGPKPLQDSTVLRLCKSRRS*SQTLAQ
Trigger: CTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTT...GCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGAAAAGCAGGAGGTCCTaGTCCCAAACTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQKSRRS*SQTLAQ
Trigger: CTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTT...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGAGGAGCCACACACCATaGATGAGGGAGCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: CSCPQWLMPPTPYLAPAERSHTP*MREPLS
Trigger: GCTCAACGGCTCCCTCATCCATGGTGTGTGGCTCCT...CTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457164.6
CDS-3UTR CCA 90 bp GGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGGTGGCAGTTGTCGCTCTAAGTaGCAGGGAGGGCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: GNCQGKGAQLERNLVDGGSCRSK*QGGRKE
Trigger: TTCCTTACGCCCTCCCTGCCACTTAGAGCGACAACT...GCCACCGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp AGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SDSLLALFLSTMADATHTILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...GGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR TCA 90 bp AGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGATACTCTGCTCAGCATaGCTGAAGCCGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RKTRFQRPWMREPLSHWMILCSA*LKPRCL
Trigger: GAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTAT...CATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
CDS-3UTR TCA 90 bp GGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGGTGGCCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: GNCQGKGAQLERNLVDGGRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...GCCACCGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
CDS-3UTR TCA 90 bp ACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCCTAGCACCAGCAGAGTaGGGAGCATCAACATCACCA +
Preference number: 4 (lower is better)
Translates to: TMADATHTIPSTSRVRSILAPAE*GASTSP
Trigger: TGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAG...GATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp GTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTGCTCTAGCACCAGCAGAGTaGGGAGCATCAACATCACCA +
Preference number: 4 (lower is better)
Translates to: VEPLDVVVPRQGEQHLIALAPAE*GASTSP
Trigger: TGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAG...AGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp TTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGCTTGTCCACAATGGCTaGTGCCACCCACACCATACC +
Preference number: 4 (lower is better)
Translates to: FLSTMADATHTIPSTSRVLVHNG*CHPHHT
Trigger: GGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAG...CACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp AGAGCCTGTGCCCGTAATGACATTCATCCAGCAGTTGCTCACTTCAGGTTCACAGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RACARNDIHPAVAHFRFTVPLPG*SLPPLL
Trigger: GAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC...TGTGAACCTGAAGTGAGCAACTGCTGGATGAATGTCATTACGGGCACAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR TCA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGSSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGGPEQQ*GRLMCK
Trigger: TTTACACATCAATCTGCCTCACTGCTGTTCTGGGCC...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLGPEQQ*GRLMCK
Trigger: TTTACACATCAATCTGCCTCACTGCTGTTCTGGGCC...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGTTTATTGCTGATGGCTaGAGCCTCCTCCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: PYPLGLSGGPKPLQDSTVFIADG*SLLLPI
Trigger: GATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAA...CACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR TCA 90 bp TGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGGATCAACTTTATTGCTaGTGGCTGAAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CLGSAGPEARETIYLPSLDQLYC*WLKPPP
Trigger: AGGAGGAGGCTTCAGCCATCAGCAATAAAGTTGATC...CAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GCAGGCTTCTTGAAGCGGGTCAGGAAGATGTGGCAGAGGATGTACAGTGTTGCAGCGCTCACGTTTCAATaGAAACACCCGCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: AGFLKRVRKMWQRMYSVAALTFQ*KHPPLG
Trigger: GCCTAGTGGCGGGTGTTTGCATTGAAACGTGAGCGC...TGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR GCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp CCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PCSCPQWLMPPTPYLAPASTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR GCA 90 bp AGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SDSLLALFLSTMADATHTSTQGN*QGKGAQ
Trigger: CTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT...GGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR GCA 90 bp TCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGCCACCCACCCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SGSDYAIVQMALLPSATHPQGRR*MSRGRG
Trigger: TCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGG...GTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAAGCTGAGCAGTACAGCTaGTCCTCCAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQAEQYS*SSRSSS
Trigger: GCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGC...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCAGTTCCCAATTATCTaGGTCATGGCAGTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGQFPII*VMAVSC
Trigger: GCACGACACTGCCATGACGCAGATAATTGGGAACTG...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR GCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQEACKG*VVEEHN
Trigger: ATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTC...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR GCA 90 bp ATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: IPLVFQVVQSPSRIAQCLECGEA*KGCVVE
Trigger: CTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC...TAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR GCA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAACTCTGCCCGCACAGCTaGAGTGAAGGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQLCPHS*SEGLHQ
Trigger: CTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAG...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCCTCTGGCTCAGATTATaGAATAGTGCAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGLWLRL*NSADGS
Trigger: AGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACCCTACCCCACCCTATTaGACATCAAATCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: PLQDSTVLRLCWARGKGDPTPPY*TSNHVN
Trigger: GTTTACATGATTTGATGTGCAATAGGGTGGGGTAGG...GTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp ACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACACAGTGCTTAGGCTCTaGTGGGCCAGAGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: TLCWPCSCPQWLMPPTPYTVLRL*WARGKG
Trigger: TCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGT...GTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp ACAGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGAGTAGTCCACTTCTGTaGGCAAGGTTCAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: TAPRAIARVKVHSSSAILSSPLL*ARFSCR
Trigger: GCGACAACTGAACCTTGCGCACAGAAGTGGACTACT...CAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR CCA 90 bp TGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGAAACTCGGGGCAGTCTaGGGCTCAGATACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: CSCPQWLMPPTPYLAPAEKLGAV*GSDTVV
Trigger: GACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTT...CTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATTCGCGGATCCTCTCGTaGAATAGCTGTTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYSRILS*NSCSRT
Trigger: CGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGA...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp AGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTCGCGGATCCTCTCGTaGAATAGCTGTTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: RKTRFQRPWMREPLSHWMSRILS*NSCSRT
Trigger: CGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGA...CATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
CDS-3UTR CCA 90 bp TCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTACGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SQIPGPEVQVALGFPPGLRVRKM*QRMYSV
Trigger: AACACTGTACATCCTCTGCCACATCTTCCTGACCCG...TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGCGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: PRAIARVKVHSSSAILLTRVRKM*QRMYSV
Trigger: AACACTGTACATCCTCTGCCACATCTTCCTGACCCG...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
CDS-3UTR CCA 90 bp GGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: GLSGGPKPLQDSTVLRLCCSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...GCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp AGGCAGCCAGCAGGAAGTAGGATTACAGATCCTGCGGGTCAGGGCTGCCTCCTCAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: RQPAGSRITDPAGQGCLLRVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...GAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp GAGGGAGCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: EGAVEPLDVVVPRQGEQHRVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...GTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACAGGCTCCGGAAGAGTaGAGAGCTATAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKQAPEE*RAIEAH
Trigger: GTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCCAATTATCTGCGTCATaGCAGTGTCGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGQLSAS*QCRAIW
Trigger: CCAGATGGCACGACACTGCCATGACGCAGATAATTG...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACGGAGGTCACTGGTGCTaGGTCTTCCTAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYGGHWC*VFLDAW
Trigger: CCAGGCATCTAGGAAGACCCAGCACCAGTGACCTCC...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGT +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLCWARGKPGPKL*LRLCNS
Trigger: ACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGG...CTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCATGTGTAAACAGATTTaGGATCAGGGGCTAGACCCA +
Preference number: 4 (lower is better)
Translates to: PEARETIYLPSLPWPSPFMCKQI*DQGLDP
Trigger: TGGGTCTAGCCCCTGATCCCAAATCTGTTTACACAT...GAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp CCCAAAAGTCATAGAGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGGGGGAAACCCCGGAATaGCTGAGAGGCTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: PKSHRVTLCWPCSCPQWLGETPE*LRGWEP
Trigger: GGGTTCCCAGCCTCTCAGCCATTCCGGGGTTTCCCC...CAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp GTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTGCTCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: VEPLDVVVPRQGEQHLIARAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...AGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
CDS-3UTR TCA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRAIARVKVHSSSAILLTSPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp TGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCACTAGCACCAGCAGAGTaGGGAGCATCAACATCACCA +
Preference number: 4 (lower is better)
Translates to: WPCSCPQWLMPPTPYLAPLAPAE*GASTSP
Trigger: TGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAG...TGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp AGGACAGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCCCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RTAPRAIARVKVHSSSAIPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...GATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp AGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGAGAGAAGACAGGAAGTGCTGAGAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: SRSKRVSPRVREKTGSAEKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...CTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp GGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGGTGGCAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: GNCQGKGAQLERNLVDGGKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...GCCACCGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp AGCTGCAGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCTGCAAAGGCTGCAAGATGAGTACAACCTaGATGACGGCACCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: SCSEGLHQTECGEACKGCKMSTT*MTAPKE
Trigger: CTCCTTTGGTGCCGTCATTCAGGTTGTACTCATCTT...GCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR TCA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACAATTGCCCAGCCAGTTaGAGCGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNNCPAS*SVQSHP
Trigger: TGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATT...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCAGTGAGGCAGATTaGTGTGTAAACAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPSSEAD*CVNRFG
Trigger: CCCAAATCTGTTTACACATCAATCTGCCTCACTGCT...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTAGGCCCAGAACAGCAGTaGGGCAGATTGATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLGPEQQ*GRLMCK
Trigger: TTTACACATCAATCTGCCTCACTGCTGTTCTGGGCC...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGATCAACTTTATTGCTaGTGGCTGAAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSRIAQCLGSSQIPGPEDQLYC*WLKPPP
Trigger: AGGAGGAGGCTTCAGCCATCAGCAATAAAGTTGATC...CTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR GCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACGCGCTCACGTTTCAATaGAAACACCCGCCACTAGGC +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYALTFQ*KHPPLG
Trigger: GCCTAGTGGCGGGTGTTTGCATTGAAACGTGAGCGC...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR GCA 90 bp CCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGCTCTGTCCTCCCTTTaGTCCCCACTCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: PCSCPQWLMPPTPYLAPAALSSL*SPLFKV
Trigger: GACCTTAAAGAGTGGGGAGCAAAGGGAGGACAGAGC...TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTACACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp ATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCAACCACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MADATHTIPSTSRVRSINHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...GTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp AGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTCACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STQGNCQGKGAQLERNLVHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...AACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
CDS-3UTR GCA 90 bp AACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTACCCCAAGGAAGGAGATaGATGAGTAGAGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: NKVPEAMDEGAVEPLDVVPQGRR*MSRGRG
Trigger: TCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGG...TACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR GCA 90 bp TCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGCCACCCACCAGTTCCCAATTATCTaGGTCATGGCAGTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: SGSDYAIVQMALLPSATHQFPII*VMAVSC
Trigger: GCACGACACTGCCATGACGCAGATAATTGGGAACTG...GTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCAGAGTGTGGTGAGGCCTaGAAAGGCTGCGTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLAECGEA*KGCVVE
Trigger: CTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp GCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGAAGCCCACAACTGCCTACCCCACCCTATTaGACATCAAATCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: AIWAAGSGRVESYRSPQLPTPPY*TSNHVN
Trigger: GTTTACATGATTTGATGTGCAATAGGGTGGGGTAGG...CAGTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTGCCCAGTCCTTTCCCTaGCCCTACCCCACCCTATTG +
Preference number: 4 (lower is better)
Translates to: ECGEACKGCVVEEHNVEIAQSFP*PYPTLL
Trigger: CAATAGGGTGGGGTAGGGGCAGGGAAAGGACTGGGC...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR GCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACTCCAGGATAGCACAGTaGTTAGGCTCTGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYSRIAQ*LGSAGP
Trigger: TGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGA...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp CCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTCCAGGATAGCACAGTaGTTAGGCTCCTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: PKPLQDSTVLRLLSDSRSSRIAQ*LGSSQI
Trigger: AATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGA...GGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR GCA 90 bp AGTACTCCCAAAAGTCATAGAGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAAGGGCAGCCTGGTACCTaGATGCCTCGGGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: STPKSHRVTLCWPCSCPQGQPGT*MPRGMA
Trigger: TGCCATGCCCCGAGGCATGCAGGTACCAGGCTGCCC...TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGGAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR CCA 90 bp AAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAAAACTCGGGGCAGTCTaGGGCTCAGATACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: KNKVPEAMDEGAVEPLDVKLGAV*GSDTVV
Trigger: GACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTT...TACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000549296.1
CDS-3UTR CCA 90 bp ACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACTCGCGGATCCTCTCGTaGAATAGCTGTTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: TLCWPCSCPQWLMPPTPYSRILS*NSCSRT
Trigger: CGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGA...GTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp CAGGTTGGAGAAGAGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTTCGCGGATCCTCTCGTaGAATAGCTGTTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: QVGEEKNKVPEAMDEGAVSRILS*NSCSRT
Trigger: CGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGA...AACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCTCTTCTCCAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000549296.1
CDS-3UTR CCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLRVRKM*QRMYSV
Trigger: AACACTGTACATCCTCTGCCACATCTTCCTGACCCG...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp AGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTTGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: STQGNCQGKGAQLERNLVCSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...AACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CCA 90 bp TCAGTGAAGAAATATGCAAAGGGCATGAGGAAGATGAGGGACAGGTTGGAGAAGGCGGGCGAGACCCAGTaGAGTACACACCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SVKKYAKGMRKMRDRLEKAGETQ*STHQEQ
Trigger: CTGCTCCTGGTGTGTACTCCACTGGGTCTCGCCCGC...CTTCTCCAACCTGTCCCTCATCTTCCTCATGCCCTTTGCATATTTCTTCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp CCAGCAGGAAGTAGGATTACAGATCCTGCGGGTCAGGGCTGCCTCCTCAAAGGCCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGT +
Preference number: 4 (lower is better)
Translates to: PAGSRITDPAGQGCLLKGPGPKL*LRLCNS
Trigger: ACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGG...GCCTTTGAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATAAAAGCAGGAGGTCCTaGTCCCAAACTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYKSRRS*SQTLAQ
Trigger: CTGAGCCAGAGTTTGGGACCAGGACCTCCTGCTTTT...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTAGTAGAATGGCTGAGAGGCTaGGAACCCAGCAATACACTC +
Preference number: 4 (lower is better)
Translates to: NKVPEAMDEGAVEPLDVVEWLRG*EPSNTL
Trigger: GAGTGTATTGCTGGGTTCCCAGCCTCTCAGCCATTC...TACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR TCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGCCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp ATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCAACAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: MADATHTIPSTSRVRSINKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...GTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCAAGGAAGGAGATGCATaGGTAGAGGTAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLKEGDA*VEVGEI
Trigger: TATCTCCCCTACCTCTACTCATGCATCTCCTTCCTT...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCAAGATGAGTACAACCTaGATGACGGCACCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLKMSTT*MTAPKE
Trigger: CTCCTTTGGTGCCGTCATTCAGGTTGTACTCATCTT...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR TCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACAATTGCCCAGCCAGTTaGAGCGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYNCPAS*SVQSHP
Trigger: TGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATT...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp ACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACAATTGCCCAGCCAGTTaGAGCGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: TLCWPCSCPQWLMPPTPYNCPAS*SVQSHP
Trigger: TGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATT...GTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp AGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAAATTGCCCAGCCAGTTaGAGCGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSSQIPGPEVQVNCPAS*SVQSHP
Trigger: TGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATT...TACTTGGACCTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR TCA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTTTATTGCTGATGGCTaGAGCCTCCTCCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNFIADG*SLLLPI
Trigger: GATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAA...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp AGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGAGAGAAGACAGGAAGTGCTGAGTTGATATCCCAGAATTaGGTAGTCCACTTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: SRSKRVSPRVREKTGSAELISQN*VVHFCA
Trigger: CGCACAGAAGTGGACTACTCAATTCTGGGATATCAA...CTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR GCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACGCTCTGTCCTCCCTTTaGTCCCCACTCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYALSSL*SPLFKV
Trigger: GACCTTAAAGAGTGGGGAGCAAAGGGAGGACAGAGC...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267102.13
ENST00000547382.5
CDS-3UTR GCA 90 bp ATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTACAGTTCCCAATTATCTaGGTCATGGCAGTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: IPLVFQVVQSPSRIAQCLQFPII*VMAVSC
Trigger: GCACGACACTGCCATGACGCAGATAATTGGGAACTG...TAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR GCA 90 bp GTGGAGTACACACCAGGAGCAGCAGAACCCCAAGGAAGGAGATGCATGAGTAGACAGTTCCCAATTATCTaGGTCATGGCAGTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VEYTPGAAEPQGRRCMSRQFPII*VMAVSC
Trigger: GCACGACACTGCCATGACGCAGATAATTGGGAACTG...TCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCTGGTGTGTACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYEACKG*VVEEHN
Trigger: ATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTC...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp GGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCCTCTGGCTCAGATTATaGAATAGTGCAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLSGGPKPLQDSTVLRLCLWLRL*NSADGS
Trigger: AGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG...GCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGCTCTGGCTCAGATTATaGAATAGTGCAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLLWLRL*NSADGS
Trigger: AGAGCCATCTGCACTATTGCATAATCTGAGCCAGAG...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGCCTACCCCACCCTATTaGACATCAAATCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: AQCLGSAGPEARETIYLPPTPPY*TSNHVN
Trigger: GTTTACATGATTTGATGTGCAATAGGGTGGGGTAGG...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp GTCCTGGTCCCAAACTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCAAGATGAGTACAACCTaGATGCCTCGGGGCATGGCA +
Preference number: 4 (lower is better)
Translates to: VLVPNSGSDYAIVQMALLKMSTT*MPRGMA
Trigger: TGCCATGCCCCGAGGCATGCAGGTTGTACTCATCTT...GAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547382.5
CDS-3UTR CCA 90 bp TGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTGCCTCGCGGATCCTCTCGTaGAATAGCTGTTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: CGEACKGCVVEEHNVEIASRILS*NSCSRT
Trigger: CGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGA...GGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp CCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCACGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: PCSCPQWLMPPTPYLAPARVRKM*QRMYSV
Trigger: AACACTGTACATCCTCTGCCACATCTTCCTGACCCG...TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp TGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCACGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: WPCSCPQWLMPPTPYLAPRVRKM*QRMYSV
Trigger: AACACTGTACATCCTCTGCCACATCTTCCTGACCCG...TGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CCA 90 bp CCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAGCATGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: PCSCPQWLMPPTPYLAPACSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...TGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQRVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp GGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: GLSGGPKPLQDSTVLRLCRVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...GCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACAATTATCTGCGTCATaGCAGTGTCGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKQLSAS*QCRAIW
Trigger: CCAGATGGCACGACACTGCCATGACGCAGATAATTG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGCCTGGTCCCAAACTCTaGCTCAGATTATGCAATAGT +
Preference number: 4 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLPGPKL*LRLCNS
Trigger: ACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGG...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGATGTGTAAACAGATTTaGGATCAGGGGCTAGACCCA +
Preference number: 4 (lower is better)
Translates to: APRAIARVKVHSSSAILLMCKQI*DQGLDP
Trigger: TGGGTCTAGCCCCTGATCCCAAATCTGTTTACACAT...CAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGATGTGTAAACAGATTTaGGATCAGGGGCTAGACCCA +
Preference number: 4 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQMCKQI*DQGLDP
Trigger: TGGGTCTAGCCCCTGATCCCAAATCTGTTTACACAT...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp GTCCTGGTCCCAAACTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: VLVPNSGSDYAIVQMALLRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...GAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACTTTATTGCTGATGGCTaGAGCCTCCTCCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYFIADG*SLLLPI
Trigger: GATAGGGAGGAGGAGGCTTCAGCCATCAGCAATAAA...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR TCA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAAGATCAACTTTATTGCTaGTGGCTGAAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKDQLYC*WLKPPP
Trigger: AGGAGGAGGCTTCAGCCATCAGCAATAAAGTTGATC...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR GCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR GCA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACACTTCGTAGTCAGGTaGTTCCATACTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLAHFVVR*FHTLLS
Trigger: GCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTG...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR GCA 90 bp ACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCAGTTCCCAATTATCTaGGTCATGGCAGTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: TLCWPCSCPQWLMPPTPYQFPII*VMAVSC
Trigger: GCACGACACTGCCATGACGCAGATAATTGGGAACTG...GTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp TCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTGAGGCCTGCAAAGGCTaGGTTGTAGAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: SLLALFLSTMADATHTIPEACKG*VVEEHN
Trigger: ATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTC...AGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR GCA 90 bp GCATCAACATCACCACTGTCTCATAGACCCGGCCCAGGACACCCTTTCTGGAGCCATTCATCCAGCAGTTaGTCACTTCAGGTTCACAAA +
Preference number: 4 (lower is better)
Translates to: ASTSPLSHRPGPGHPFWSHSSSS*SLQVHK
Trigger: TTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATG...GCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR CCA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTAAACTCGGGGCAGTCTaGGGCTCAGATACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: ECGEACKGCVVEEHNVEIKLGAV*GSDTVV
Trigger: GACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTT...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS-3UTR CCA 90 bp CGTAATGACATTCATCCAGCAGTTGCTCACTTCAGGTTCACAAAGGGCTTTCACCCAGGACACCCTTTCTaGAGCCAGCAAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RNDIHPAVAHFRFTKGFHPGHPF*SQQSPQ
Trigger: CTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...GTGAAAGCCCTTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGTCATTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR CCA 90 bp GCATCTTCATCATCCATCAGGCTCCCCATAAAGAGAAAGGCCACCATCACCAGGTGTTCTTGTCCACAATaGCTGATGCCACCCACACCA +
Preference number: 4 (lower is better)
Translates to: ASSSSIRLPIKRKATITRCSCPQ*LMPPTP
Trigger: TGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACA...CCTGGTGATGGTGGCCTTTCTCTTTATGGGGAGCCTGATGGATGATGAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551169.5
CDS-3UTR CCA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTCAGGCTCCGGAAGAGTaGAGAGCTATAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ECGEACKGCVVEEHNVEIQAPEE*RAIEAH
Trigger: GTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTG...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp GCATCAACATCACCACTGTCTCATAGACCCGGCCCAGGACACCCTTTCTGGAGCATTAACCATCTCCTTTaGTCCACACAATGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ASTSPLSHRPGPGHPFWSINHLL*STQWSR
Trigger: CCTACTCCATTGTGTGGACCAAAGGAGATGGTTAAT...GCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR CCA 90 bp CAGTCATCAGGGAGGTCTCTGGTCCTGGCTGTGGAAGCACTAGGAGAGGAGATGATTAACCATCTCCTTTaGTCCACACAATGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QSSGRSLVLAVEALGEEMINHLL*STQWSR
Trigger: CCTACTCCATTGTGTGGACCAAAGGAGATGGTTAAT...CATCTCCTCTCCTAGTGCTTCCACAGCCAGGACCAGAGACCTCCCTGATGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR TCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYSPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp ACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLCWPCSCPQWLMPPTPYSPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...GTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR GCA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTACCTACCCCACCCTATTaGACATCAAATCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLPTPPY*TSNHVN
Trigger: GTTTACATGATTTGATGTGCAATAGGGTGGGGTAGG...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp TGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTGCCCGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: CGEACKGCVVEEHNVEIARVRKM*QRMYSV
Trigger: AACACTGTACATCCTCTGCCACATCTTCCTGACCCG...GGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATATGTGTAAACAGATTTaGGATCAGGGGCTAGACCCA +
Preference number: 4 (lower is better)
Translates to: RIAQCLGSAGPEARETIYMCKQI*DQGLDP
Trigger: TGGGTCTAGCCCCTGATCCCAAATCTGTTTACACAT...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CCA 90 bp GTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTGCTATTAACCATCTCCTTTaGTCCACACAATGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VEPLDVVVPRQGEQHLIAINHLL*STQWSR
Trigger: CCTACTCCATTGTGTGGACCAAAGGAGATGGTTAAT...AGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000550815.1
ENST00000551169.5
CDS-3UTR TCA 90 bp CCCAAAAGTCATAGAGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGCGAGCGCAATCTTGTTaGCGGTGGCATCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: PKSHRVTLCWPCSCPQWLRAQSC*RWHLHH
Trigger: ATGATGAAGATGCCACCGTCAACAAGATTGCGCTCG...CAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp CTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTACCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LCWPCSCPQWLMPPTPYLPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...TAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR TCA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR TCA 90 bp GAGAGAAGACAGGAAGTGCTGAGCTTAGGACCAGGAGACAGACACAGTTCCCAACCAAAAGTCATAGAGTaGCTCTCTGTTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ERRQEVLSLGPGDRHSSQPKVIE*LSVGLV
Trigger: AACAAGGCCAACAGAGAGTCACTCTATGACTTTTGG...TTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CCA 90 bp AGTACTCCCAAAAGTCATAGAGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAAAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACA +
Preference number: 4 (lower is better)
Translates to: STPKSHRVTLCWPCSCPQSSSRM*MATMST
Trigger: TGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCT...TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGGAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR TCA 90 bp CGTAATGACATTCATCCAGCAGTTGCTCACTTCAGGTTCACAAAGGGCTTTCACAGCCCTCAGACTCAGTaGAGAAATATGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RNDIHPAVAHFRFTKGFHSPQTQ*RNMQRA
Trigger: TGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCT...GTGAAAGCCCTTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGTCATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR GCA 90 bp TGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTGCCCATTCATCCAGCAGTTaGTCACTTCAGGTTCACAAA +
Preference number: 4 (lower is better)
Translates to: CGEACKGCVVEEHNVEIAHSSSS*SLQVHK
Trigger: TTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATG...GGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CCA 90 bp CCCAAAAGTCATAGAGTGACTCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGAGAGTGACTCTCTGTTaGCCTTGTTCTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: PKSHRVTLCWPCSCPQWLRVTLC*PCSCPQ
Trigger: TTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT...CAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS CCA 90 bp CAGGGAAGCCCCAGCTCATGGGATGGGCACAGCCTCGGGCATTCATaGGAACCTGGTCACCTGCCATGTCACATACCCAGGCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QGSPSSWDGHSLGHS*EPGHLPCHIPRLSP
Trigger: TGGGGACAGCCTGGGTATGTGACATGGCAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATGAGCTGGGGCTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 90 bp CCCCACCCTAGCTCTTTACCTCCAGGGAAGCCCCAGCTCATGGGATaGGCACAGCCTCGGGCATTCATGGGAACCTGGTCACCTGCCATG +
Preference number: 5 (lower is better)
Translates to: PHPSSLPPGKPQLMG*AQPRAFMGTWSPAM
Trigger: CATGGCAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATGAGCTGGGGCTTCCCTGGAGGTAAAGAGCTAGGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 90 bp TGCCACCCCACCCTAGCTCTTTACCTCCAGGGAAGCCCCAGCTCATaGGATGGGCACAGCCTCGGGCATTCATGGGAACCTGGTCACCTG +
Preference number: 5 (lower is better)
Translates to: CHPTLALYLQGSPSS*DGHSLGHSWEPGHL
Trigger: CAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATGAGCTGGGGCTTCCCTGGAGGTAAAGAGCTAGGGTGGGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 90 bp CCCTCTGAAGCCCTGGGAGGACCACTCACTGGGGAAACCCCGGAATaGCTGAGAGGCTGGGAACCCAGCAATACACTCGCGGATCCTCTC +
Preference number: 5 (lower is better)
Translates to: PSEALGGPLTGETPE*LRGWEPSNTLADPL
Trigger: GAGAGGATCCGCGAGTGTATTGCTGGGTTCCCAGCCTCTCAGCCATTCCGGGGTTTCCCCAGTGAGTGGTCCTCCCAGGGCTTCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000551115.1
CDS-3UTR CAA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: SPSRIAQCLGSAGPEAREEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS TCA 90 bp ATAGCACTTCGTAGTCAGGTGCTTCCATACTCTGCTCAGCATGACTaGAGCCGAGGTGCCTCTGGGCCCGGGGAGGACGAGCGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: IALRSQVLPYSAQHD*SRGASGPGEDERGG
Trigger: TCCTCCCCGCTCGTCCTCCCCGGGCCCAGAGGCACCTCGGCTTCAGTCATGCTGAGCAGAGTATGGAAGCACCTGACTACGAAGTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000457164.6
ENST00000547382.5
ENST00000547670.5
ENST00000547675.5
ENST00000548983.1
ENST00000549296.1
ENST00000550137.5
ENST00000550815.1
ENST00000550867.5
ENST00000551115.1
ENST00000551535.1
ENST00000551782.5
ENST00000552153.5
ENST00000553204.5
CDS GCA 90 bp CATGGGATGGGCACAGCCTCGGGCATTCATGGGAACCTGGTCACCTaGCATGTCACATACCCAGGCTGTCCCCAGGAATGTGGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: HGMGTASGIHGNLVT*HVTYPGCPQECGPP
Trigger: GGGAGGACCACATTCCTGGGGACAGCCTGGGTATGTGACATGGCAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 90 bp CCCCAGCTCATGGGATGGGCACAGCCTCGGGCATTCATGGGAACCTaGTCACCTGCCATGTCACATACCCAGGCTGTCCCCAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: PQLMGWAQPRAFMGT*SPAMSHTQAVPRNV
Trigger: CACATTCCTGGGGACAGCCTGGGTATGTGACATGGCAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATGAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 90 bp TCCGCCTCTTCTCTGTGCAGGGATGGGAGGCTGTCAGCAAGCACCTaGAACCAGGGGCTACTCTCCTTGGGGAAACCCAGGTATCCCAAG +
Preference number: 5 (lower is better)
Translates to: SASSLCRDGRLSAST*NQGLLSLGKPRYPK
Trigger: CTTGGGATACCTGGGTTTCCCCAAGGAGAGTAGCCCCTGGTTCCAGGTGCTTGCTGACAGCCTCCCATCCCTGCACAGAGAAGAGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551143.5
ENST00000552141.5
CDS CCA 90 bp ATGCCTCGGGGCATGGCAGCCTCATCGATGAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACAGACAGGCCCTGTGTGAGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: MPRGMAASSMSSSRM*MATMSTDRPCVRQG
Trigger: ACCTTGCCTCACACAGGGCCTGTCTGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCATGCCCCGAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547813.5
CDS CCA 90 bp CTTACTCCCTCCCAGCTACCTGCGTCATGGCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGAAGCCCACAA +
Preference number: 5 (lower is better)
Translates to: LTPSQLPASWQCRAI*AAGSGRVESYRSPQ
Trigger: TTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGGTAGCTGGGAGGGAGTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550867.5
CDS-3UTR CAA 90 bp GCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: ALLGQRQGRQSISRACPGSSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...GCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp TGCGTCATGGCAGTGTCGTGCCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAGAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: CVMAVSCHLGRRLRKSGESSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CAA 90 bp GTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCAGGGTTCGGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: VEASKVTQQVKASEPQGSEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...CGAACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CAA 90 bp GGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTGCCTCCTCCCTATCCCCTaGGTCTTTCAGGTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GKGDNLSPEPALAQSFPCLLPIP*VFQVVQ
Trigger: TTGGACCACCTGAAAGACCAAGGGGATAGGGAGGAG...GCAGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS CCA 90 bp ATGGGAGGCTGTCAGCAAGCACCTGGAACCAGGGGCTACTCTCCTTaGGGAAACCCAGGTATCCCAAGCCCTACGAAGCCACATACCCAG +
Preference number: 5 (lower is better)
Translates to: MGGCQQAPGTRGYSP*GNPGIPSPTKPHTQ
Trigger: CTGGGTATGTGGCTTCGTAGGGCTTGGGATACCTGGGTTTCCCCAAGGAGAGTAGCCCCTGGTTCCAGGTGCTTGCTGACAGCCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551143.5
ENST00000552141.5
CDS-3UTR CAA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: SPSRIAQCLGSAGPEARENSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp AGCCCCTCCAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SPSRIAQCLGSAGPEARESSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...CTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CAA 90 bp CAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCTAGGCCTCCTCCCTATCCCCTaGGTCTTTCAGGTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: QIPGPEVQVALGFPPGLGLLPIP*VFQVVQ
Trigger: TTGGACCACCTGAAAGACCAAGGGGATAGGGAGGAG...GCCTAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CAA 90 bp GAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCCCTGGCCCAGTCCTTTCCCTAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: EARETIYLPSLPWPSPFPSSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...AGGGAAAGGACTGGGCCAGGGCAGGCTCGGGAGATAGATTGTCTCCCTTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp AGGCAGCCAGCAGGAAGTAGGATTACAGATCCTGCGGGTCAGGGCTGCCTCCTCCTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: RQPAGSRITDPAGQGCLLLLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...GAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CAA 90 bp TCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGCCACCCACGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: SGSDYAIVQMALLPSATHEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...GTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CAA 90 bp GATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAGGCCCTGGGATCAACTTTATaGCTGATGGCTGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: DLGSGARPSHPALPHAEALGSTL*LMAEAS
Trigger: GGAGGCTTCAGCCATCAGCAATAAAGTTGATCCCAG...GGCCTCAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS TCA 90 bp AAGGGGACAGTGTCCTTGCTTAGCTCAGCACTCACTACCCTGTGCTaGAGAAGCCCCATTTGTCCTGAGGGCGCCTGTGGCTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: KGTVSLLSSALTTLC*RSPICPEGACGFQN
Trigger: GTTCTGGAAGCCACAGGCGCCCTCAGGACAAATGGGGCTTCTTCAGCACAGGGTAGTGAGTGCTGAGCTAAGCAAGGACACTGTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS TCA 90 bp TCTCATAGACCCGGCCCAGGACACCCTACGGGAGGAGGCAACCAGTaGAGAAGGTTAACATCAGGGCAGTGTGGGAACATTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: SHRPGPGHPTGGGNQ*RRLTSGQCGNIGDG
Trigger: GCCATCTCCAATGTTCCCACACTGCCCTGATGTTAACCTTCTTCACTGGTTGCCTCCTCCCGTAGGGTGTCCTGGGCCGGGTCTATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS-3UTR CAA 90 bp AGGTCTTCCAGCAGCCGGGGCTTGACTAGCAGCTTCCCAGTGACGGAGAACATGCTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: RSSSSRGLTSSFPVTENMLLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...CATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CAA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACCCAAAGGAGCCCAGCTaGGAGAAGGAGACCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNPKEPS*EKETWP
Trigger: AGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGG...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR CAA 90 bp AGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCCAAAGGAGCCCAGCTaGGAGAAGGAGACCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RIAQCLGSAGPEARETIYPKEPS*EKETWP
Trigger: AGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGG...ATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547698.5
CDS-3UTR CAA 90 bp GCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAAATTGCCCAGCCAGTaGAAGCGTCCAAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: AQCLGSAGPEARETIYLPKLPSQ*KRPKSP
Trigger: GGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTT...CGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp TCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCAAATTGCCCAGCCAGTaGAAGCGTCCAAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: SSQIPGPEVQVALGFPPGKLPSQ*KRPKSP
Trigger: GGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTT...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR CAA 90 bp GGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCCTCCTCCCTATCCCCTaGGTCTTTCAGGTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GLSGGPKPLQDSTVLRLLLLPIP*VFQVVQ
Trigger: TTGGACCACCTGAAAGACCAAGGGGATAGGGAGGAG...GAGGAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS GCA 90 bp AAAGGTGCACAGCTCGAGCCTGGGCAGAGAAGGGGACAGTGTCCTTaGTTAGCTCAGCACTCACTACCCTGTGCTGAAGAAGCCCCATTT +
Preference number: 5 (lower is better)
Translates to: KGAQLEPGQRRGQCP*LAQHSLPCAEEAPF
Trigger: AAATGGGGCTTCTTCAGCACAGGGTAGTGAGTGCTGAGCTAAGCAAGGACACTGTCCCCTTCTCTGCCCAGGCTCGAGCTGTGCACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS-3UTR CAA 90 bp TTGACTAGCAGCTTCCCAGTGACGGAGAACATGCGGGCGAGACCCAGTGGAGTAAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: LTSSFPVTENMRARPSGVNSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...TACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS-3UTR CAA 90 bp AAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCATGCTGAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: KQIWDQGLDPVTQPYPMLNSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...CAGCATGGGGTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: PRAIARVKVHSSSAILLTNSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
CDS-3UTR CAA 90 bp CTCCCTATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGAAATTGCCCAGCCAGTaGAAGCGTCCAAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: LPIPLVFQVVQSPSRIAQKLPSQ*KRPKSP
Trigger: GGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTT...CTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGATAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR CAA 90 bp CCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCAAATTGCCCAGCCAGTaGAAGCGTCCAAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: PLVFQVVQSPSRIAQCLGKLPSQ*KRPKSP
Trigger: GGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTT...GCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000553040.5
CDS-3UTR CAA 90 bp AGGATAGCACAGTGCTTAGGCTCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGAGGTCCAAGTAGCCTaGGGCTTCCCTCCAGGCCTA +
Preference number: 5 (lower is better)
Translates to: RIAQCLGSSQIPGPEVQVEVQVA*GFPPGL
Trigger: TAGGCCTGGAGGGAAGCCCAAGGCTACTTGGACCTC...TACTTGGACCTCAGGACCTGGAATCTGAGAGGAGCCTAAGCACTGTGCTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553040.5
CDS-3UTR CAA 90 bp CTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTAGGCTCCTCCTCCCTATCCCCTaGGTCTTTCAGGTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: LGLSGGPKPLQDSTVLRLLLPIP*VFQVVQ
Trigger: TTGGACCACCTGAAAGACCAAGGGGATAGGGAGGAG...GAGCCTAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CAA 90 bp TGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTATCTCCCGAGCCTGCTGGGATCAACTTTATaGCTGATGGCTGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: CLGSAGPEARETIYLPSLLGSTL*LMAEAS
Trigger: GGAGGCTTCAGCCATCAGCAATAAAGTTGATCCCAG...CAGGCTCGGGAGATAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS GCA 90 bp CTATTCCTTGTCATTGTGTGCTCTGGGAGGCTGACCTCCGAGGTCTaGATCCCACAAGCTCTTTGCCCTCTGGTTTCGCATCCAACAGGA +
Preference number: 5 (lower is better)
Translates to: LFLVIVCSGRLTSEV*IPQALCPLVSHPTG
Trigger: TCCTGTTGGATGCGAAACCAGAGGGCAAAGAGCTTGTGGGATGCAGACCTCGGAGGTCAGCCTCCCAGAGCACACAATGACAAGGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CCA 90 bp CCTGGTCACCTGCCATGTCACATACCCAGGCTGTCCCCAGGAATGTaGTCCTCCCATACATGCCTATCAGTTATGCCAGGTATGATGCCA +
Preference number: 5 (lower is better)
Translates to: PGHLPCHIPRLSPGM*SSHTCLSVMPGMMP
Trigger: TGGCATCATACCTGGCATAACTGATAGGCATGTATGGGAGGACCACATTCCTGGGGACAGCCTGGGTATGTGACATGGCAGGTGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 90 bp TTTGCATCTCCTTTCCCCAGACCTATTCCTTGTCATTGTGTGCTCTaGGAGGCTGACCTCCGAGGTCTGCATCCCACAAGCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: FASPFPRPIPCHCVL*EADLRGLHPTSSLP
Trigger: GGGCAAAGAGCTTGTGGGATGCAGACCTCGGAGGTCAGCCTCCCAGAGCACACAATGACAAGGAATAGGTCTGGGGAAAGGAGATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS-3UTR CAA 90 bp AGCACCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: STQGNCQGKGAQLERNLVSSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...AACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000550815.1
ENST00000551169.5
CDS-3UTR CAA 90 bp CAGGATAGCACAGTGCTTAGGCTCTGCTGGGCCAGAGGCAAGGGAGACAATCTACTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: QDSTVLRLCWARGKGDNLLLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...TAGATTGTCTCCCTTGCCTCTGGCCCAGCAGAGCCTAAGCACTGTGCTATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp TGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTGCCCCAAAGGAGCCCAGCTaGGAGAAGGAGACCTGGCCT +
Preference number: 5 (lower is better)
Translates to: CGEACKGCVVEEHNVEIAPKEPS*EKETWP
Trigger: AGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGG...GGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS-3UTR CAA 90 bp CCCTCTCAGATTCCAGGTCCTGAGGTCCAAGTAGCCTTGGGCTTCCCTCCAGGCCCCTACCCCACCCTATaGCACATCAAATCATGTAAA +
Preference number: 5 (lower is better)
Translates to: PSQIPGPEVQVALGFPPGPYPTL*HIKSCK
Trigger: TTTACATGATTTGATGTGCAATAGGGTGGGGTAGGG...GCCTGGAGGGAAGCCCAAGGCTACTTGGACCTCAGGACCTGGAATCTGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CAA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTCCTCCCTATCCCCTaGGTCTTTCAGGTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKLLPIP*VFQVVQ
Trigger: TTGGACCACCTGAAAGACCAAGGGGATAGGGAGGAG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CAA 90 bp CAGCCCAAAGGCCCGGATCAGCTCTGCCCGCACAGCTGCAGTGAAGGTCTTCACAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: QPKGPDQLCPHSCSEGLHRGCTV*QTEVLI
Trigger: TATCAACACTTCTGTTTGCAACACTGTACATCCTCT...GTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CAA 90 bp TTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: LALFLSTMADATHTIPSTNSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...GGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CAA 90 bp TGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACCAAGCTCGAGCGCAATCTaGTTGACGGTGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: WPCSCPQWLMPPTPYLAPSSSAI*LTVASS
Trigger: TGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCT...TGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CAA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACCTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNLLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp AGAAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGAAATTGCCCAGCCAGTaGAAGCGTCCAAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: RKTRFQRPWMREPLSHWMKLPSQ*KRPKSP
Trigger: GGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTT...CATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS TCA 90 bp AATCAAGCTCAGTGTGACGACGTCTCCCCTTCATCCAACGTCAGCTaGGTTTGCCCTCAACCCAGTTTGAGAAGCAAACCCATCCTTCCC +
Preference number: 5 (lower is better)
Translates to: NQAQCDDVSPSSNVS*VCPQPSLRSKPILP
Trigger: GGGAAGGATGGGTTTGCTTCTCAAACTGGGTTGAGGGCAAACTCAGCTGACGTTGGATGAAGGGGAGACGTCGTCACACTGAGCTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551854.5
CDS GCA 90 bp CTTCATTTGCATCTCCTTTCCCCAGACCTATTCCTTGTCATTGTGTaGTCTGGGAGGCTGACCTCCGAGGTCTGCATCCCACAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LHLHLLSPDLFLVIV*SGRLTSEVCIPQAL
Trigger: AAGAGCTTGTGGGATGCAGACCTCGGAGGTCAGCCTCCCAGAGCACACAATGACAAGGAATAGGTCTGGGGAAAGGAGATGCAAATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CCA 90 bp CCAGTGAAGAAGGTTAACATCAGGGCAGTGTGGGAACATTGGAGATaGCAGGCAGCCTGCAGGAACCAGAAAGGTTTGGATTCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: PVKKVNIRAVWEHWR*QAACRNQKGLDSGG
Trigger: ACCTCCTGAATCCAAACCTTTCTGGTTCCTGCAGGCTGCCTGCCATCTCCAATGTTCCCACACTGCCCTGATGTTAACCTTCTTCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS-3UTR CAA 90 bp CCCAGCCAGTTGAAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGAGTGAGCCCCAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: PSQLKRPKSPSRSKRVSPRGCTV*QTEVLI
Trigger: TATCAACACTTCTGTTTGCAACACTGTACATCCTCT...GGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CAA 90 bp TGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGCACTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: CWPCSCPQWLMPPTPYLALLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...TGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CAA 90 bp AAAAACAAGGTTCCAGAGGCCATGGATGAGGGAGCCGTTGAGCCACTGGATGTACTGTTGGCCTTGTTCTaGTCCACAATGGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: KNKVPEAMDEGAVEPLDVLLALF*STMADA
Trigger: GGCATCAGCCATTGTGGACAAGAACAAGGCCAACAG...TACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000547670.5
ENST00000551169.5
CDS-3UTR CAA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACTGGGATCAACTTTATaGCTGATGGCTGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKLGSTL*LMAEAS
Trigger: GGAGGCTTCAGCCATCAGCAATAAAGTTGATCCCAG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CAA 90 bp CCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACCTGGGATCAACTTTATaGCTGATGGCTGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PMLRPQLSMEKQEVLVPNLGSTL*LMAEAS
Trigger: GGAGGCTTCAGCCATCAGCAATAAAGTTGATCCCAG...GTTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CAA 90 bp ATCCCCTTGGTCTTTCAGGTGGTCCAAAGCCCCTCCAGGATAGCACAGTGCTTACTGGGATCAACTTTATaGCTGATGGCTGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: IPLVFQVVQSPSRIAQCLLGSTL*LMAEAS
Trigger: GGAGGCTTCAGCCATCAGCAATAAAGTTGATCCCAG...TAAGCACTGTGCTATCCTGGAGGGGCTTTGGACCACCTGAAAGACCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
ENST00000553040.5
CDS-3UTR CAA 90 bp GGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGGTGGCACATTCATCCAGCAGTaGCTCACTTCAGGTTCACAA +
Preference number: 5 (lower is better)
Translates to: GNCQGKGAQLERNLVDGGTFIQQ*LTSGSQ
Trigger: TTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGT...GCCACCGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR CAA 90 bp GCCGTTGAGCCACTGGATGTAGTAGTTCCGAGGCAGGGAGAGCAGCACCTCATTACATTCATCCAGCAGTaGCTCACTTCAGGTTCACAA +
Preference number: 5 (lower is better)
Translates to: AVEPLDVVVPRQGEQHLITFIQQ*LTSGSQ
Trigger: TTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGT...AATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000551169.5
CDS-3UTR CAA 90 bp CCCAGGGCAATTGCCAGGGTAAAGGTGCACAGCTCGAGCGCAATCTTGTTGACGGTTGATATCCCAGAATaGAGTAGTCCACTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: PRAIARVKVHSSSAILLTVDIPE*SSPLLC
Trigger: GCACAGAAGTGGACTACTCAATTCTGGGATATCAAC...CGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547670.5
CDS TCA 90 bp AGAGGCAATGATGGGTTTCCAGAAGGATACAAGATGAGTACAACCTaGATGACGGCACCAAAGGAGCCCAGCTTGGAGAAGGAGACCTGG +
Preference number: 5 (lower is better)
Translates to: RGNDGFPEGYKMSTT*MTAPKEPSLEKETW
Trigger: CCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGGTGCCGTCATTCAGGTTGTACTCATCTTGTATCCTTCTGGAAACCCATCATTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547813.5
ENST00000550867.5
CDS TCA 90 bp TCTCCCCTTCATCCAACGTCAGCTGAGTTTGCCCTCAACCCAGTTTaGGAAGCAAACCCATCCTTCCCCGATTATCAGACTAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SPLHPTSAEFALNPV*EANPSFPDYQTKAD
Trigger: GTCTGCCTTAGTCTGATAATCGGGGAAGGATGGGTTTGCTTCTCAAACTGGGTTGAGGGCAAACTCAGCTGACGTTGGATGAAGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551854.5
CDS CCA 90 bp AGGCAACCAGTGAAGAAGGTTAACATCAGGGCAGTGTGGGAACATTaGAGATGGCAGGCAGCCTGCAGGAACCAGAAAGGTTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: RQPVKKVNIRAVWEH*RWQAACRNQKGLDS
Trigger: TGAATCCAAACCTTTCTGGTTCCTGCAGGCTGCCTGCCATCTCCAATGTTCCCACACTGCCCTGATGTTAACCTTCTTCACTGGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS-3UTR CAA 90 bp ATGGCTGATGCCACCCACACCATACCTAGCACCAGCAGAGTGAGGAGCATCAACCCCTACCCCACCCTATaGCACATCAAATCATGTAAA +
Preference number: 5 (lower is better)
Translates to: MADATHTIPSTSRVRSINPYPTL*HIKSCK
Trigger: TTTACATGATTTGATGTGCAATAGGGTGGGGTAGGG...GTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417750.5
CDS GCA 90 bp GCAAACAGAAGTGTTGATATCCCAGAATTGAGTAGTCCACTTCTGTaGGCAAGGTTCAGTTGTCGCTCTAAGTGGCAGGGAGGGCGTAAG +
Preference number: 5 (lower is better)
Translates to: ANRSVDIPELSSPLL*ARFSCRSKWQGGRK
Trigger: CTTACGCCCTCCCTGCCACTTAGAGCGACAACTGAACCTTGCGCACAGAAGTGGACTACTCAATTCTGGGATATCAACACTTCTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000551115.1
CDS-3UTR CAA 90 bp GAGTGTGGTGAGGCCTGCAAAGGCTGCGTTGTAGAGGAACACAATGTAGAAATTAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: ECGEACKGCVVEEHNVEINSAGF*KRVRKM
Trigger: CATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...AATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417750.5
ENST00000547670.5
CDS-3UTR CAA 90 bp CCCCATGCTGAGGCCACAGTTAAGTATGGAAAAGCAGGAGGTCCTGGTCCCAAACCCTACCCCACCCTATaGCACATCAAATCATGTAAA +
Preference number: 5 (lower is better)
Translates to: PHAEATVKYGKAGGPGPKPYPTL*HIKSCK
Trigger: TTTACATGATTTGATGTGCAATAGGGTGGGGTAGGG...TTTGGGACCAGGACCTCCTGCTTTTCCATACTTAACTGTGGCCTCAGCATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS-3UTR CAA 90 bp TCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCCCCTCTGCCACCCACAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: SGSDYAIVQMALLPSATHRGCTV*QTEVLI
Trigger: TATCAACACTTCTGTTTGCAACACTGTACATCCTCT...GTGGGTGGCAGAGGGGAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp TTGATGTGTAAACAGATTTGGGATCAGGGGCTAGACCCAGTCACCCAGCCCTACCCCTACCCCACCCTATaGCACATCAAATCATGTAAA +
Preference number: 5 (lower is better)
Translates to: LMCKQIWDQGLDPVTQPYPYPTL*HIKSCK
Trigger: TTTACATGATTTGATGTGCAATAGGGTGGGGTAGGG...GTAGGGCTGGGTGACTGGGTCTAGCCCCTGATCCCAAATCTGTTTACACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
ENST00000547698.5
CDS CCA 90 bp TATGACACTAAGACAACAGCTCCTCTCTGGGCAGCTTCACATCCCTaGCTTCAGCTATTAGTGGGTTCTAGAAACCATTTCCTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: YDTKTTAPLWAASHP*LQLLVGSRNHFLPL
Trigger: CAAAGGGAGGAAATGGTTTCTAGAACCCACTAATAGCTGAAGCCAGGGATGTGAAGCTGCCCAGAGAGGAGCTGTTGTCTTAGTGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS TCA 90 bp TTACGCCCATTTTGTAGGATGAAACTGAGGATCAGAAATGTTATATaGCTTGCCCAGCAGACACATCCATCTAGCCGCCCTTGCCCCTAT +
Preference number: 5 (lower is better)
Translates to: LRPFCRMKLRIRNVI*LAQQTHPSSRPCPY
Trigger: ATAGGGGCAAGGGCGGCTAGATGGATGTGTCTGCTGGGCAAGTCATATAACATTTCTGATCCTCAGTTTCATCCTACAAAATGGGCGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551535.1
CDS CCA 90 bp CCTGTGGTGAACTCAGCAGGCTTCTTGAAGCGGGTCAGGAAGATGTaGCAGAGGATGTACAGTGTTGCAAACAGAAGTGTTGATATAATA +
Preference number: 5 (lower is better)
Translates to: PVVNSAGFLKRVRKM*QRMYSVANRSVDII
Trigger: TATTATATCAACACTTCTGTTTGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTTCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000457164.6
ENST00000550137.5
ENST00000551535.1
CDS-3UTR CAA 90 bp GTCCTGGTCCCAAACTCTGGCTCAGATTATGCAATAGTGCAGATGGCTCTGCTCAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: VLVPNSGSDYAIVQMALLRGCTV*QTEVLI
Trigger: TATCAACACTTCTGTTTGCAACACTGTACATCCTCT...GAGCAGAGCCATCTGCACTATTGCATAATCTGAGCCAGAGTTTGGGACCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267102.13
ENST00000417750.5
ENST00000547382.5
CDS-3UTR CAA 90 bp TCTCTGTTGGCCTTGTTCTTGTCCACAATGGCTGATGCCACCCACACCATACCTAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: SLLALFLSTMADATHTIPRGCTV*QTEVLI
Trigger: TATCAACACTTCTGTTTGCAACACTGTACATCCTCT...AGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417750.5
ENST00000457164.6
ENST00000547670.5
CDS TCA 90 bp AACATTTGTGCTCACCACAGGCAGGACATAAAAGTAGGCACTCAGTaGGAAGCAACCACTATTACTGATGATAACCAGGTCCCTGCATTG +
Preference number: 5 (lower is better)
Translates to: NICAHHRQDIKVGTQ*EATTITDDNQVPAL
Trigger: CAATGCAGGGACCTGGTTATCATCAGTAATAGTGGTTGCTTCTCACTGAGTGCCTACTTTTATGTCCTGCCTGTGGTGAGCACAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552141.5
CDS CCA 72 bp TTTCCTCGCAGCCTGCGACAGAAACTCGGGGCAGTCTaGGGCTCAGATACAGTCGTCCGGACGCCCCGCCCT +
Preference number: 6 (lower is better)
Translates to: FPRSLRQKLGAV*GSDTVVRTPRP
Trigger: AGGGCGGGGCGTCCGGACGACTGTATCTGAGCCCCAGACTGCCCCGAGTTTCTGTCGCAGGCTGCGAGGAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000267102.13
ENST00000457164.6
ENST00000547382.5
ENST00000547670.5
ENST00000548983.1
ENST00000549296.1
ENST00000550137.5
ENST00000551115.1
ENST00000551535.1
ENST00000552153.5
CDS TCA 72 bp CAGGGAGGGCGTAAGGAACAGCAGCCAGGTACCCTCTaGAGCCCTGGGAGGACCACTCACTGGGGAAACCCC +
Preference number: 6 (lower is better)
Translates to: QGGRKEQQPGTL*SPGRTTHWGNP
Trigger: GGGGTTTCCCCAGTGAGTGGTCCTCCCAGGGCTTCAGAGGGTACCTGGCTGCTGTTCCTTACGCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000551115.1
CDS GCA 72 bp GGAGAAGGGCAGGAGCAGGACAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAGCTCGAGCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GEGQEQDSTQGN*QGKGAQLEPGQ
Trigger: CTGCCCAGGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS GCA 72 bp TACTCCCTCCCAGCTACCTGCGTCATGGCAGTGTCGTaGCATCTGGGCCGCAGGCTCCGGAAGAGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: YSLPATCVMAVS*HLGRRLRKSGE
Trigger: CTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGGTAGCTGGGAGGGAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550867.5
CDS CCA 72 bp GCCCTGGGAGGACCACTCACTGGGGAAACCCCGGAATaGCTGAGAGGCTGGGAACCCAGCAATACACTCGCG +
Preference number: 6 (lower is better)
Translates to: ALGGPLTGETPE*LRGWEPSNTLA
Trigger: CGCGAGTGTATTGCTGGGTTCCCAGCCTCTCAGCCATTCCGGGGTTTCCCCAGTGAGTGGTCCTCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000551115.1
CDS TCA 72 bp CATAGCCAGGGGGTAGCCCAGGTTCCGTTGCCAGGCTaGAGCCTTCCGCCTCTTCTCTGTGCAGGGATGGGA +
Preference number: 6 (lower is better)
Translates to: HSQGVAQVPLPG*SLPPLLCAGMG
Trigger: TCCCATCCCTGCACAGAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAACCTGGGCTACCCCCTGGCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551143.5
ENST00000552141.5
CDS GCA 72 bp GGAGAAGGGCAGGAGCAGGACAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAGCTCGAGCCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: GEGQEQDSTQGN*QGKGAQLEPVV
Trigger: CACCACAGGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457164.6
CDS CCA 72 bp TCTCTGTGCAGGGATGGGAGGCTGTCAGCAAGCACCTaGAACCAGGGGCTACTCTCCTTGGGGAAACCCAGG +
Preference number: 6 (lower is better)
Translates to: SLCRDGRLSAST*NQGLLSLGKPR
Trigger: CCTGGGTTTCCCCAAGGAGAGTAGCCCCTGGTTCCAGGTGCTTGCTGACAGCCTCCCATCCCTGCACAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551143.5
ENST00000552141.5
CDS CCA 72 bp ATGGGATGGGCACAGCCTCGGGCATTCATGGGAACCTaGTCACCTGCCATGTCACATACCCAGGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: MGWAQPRAFMGT*SPAMSHTQAVP
Trigger: GGGGACAGCCTGGGTATGTGACATGGCAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 72 bp CCCAGCTCATGGGATGGGCACAGCCTCGGGCATTCATaGGAACCTGGTCACCTGCCATGTCACATACCCAGG +
Preference number: 6 (lower is better)
Translates to: PSSWDGHSLGHS*EPGHLPCHIPR
Trigger: CCTGGGTATGTGACATGGCAGGTGACCAGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 72 bp TCCCAGCTACCTGCGTCATGGCAGTGTCGTGCCATCTaGGCCGCAGGCTCCGGAAGAGTGGAGAGCTATAGA +
Preference number: 6 (lower is better)
Translates to: SQLPASWQCRAI*AAGSGRVESYR
Trigger: TCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGGTAGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550867.5
CDS GCA 72 bp CTAAGGAAGGAGCTGTCCAGCTGGGGTTCTACCCACTaGCACCCCACCCTAGCTCTTTACCTCCAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: LRKELSSWGSTH*HPTLALYLQGS
Trigger: GCTTCCCTGGAGGTAAAGAGCTAGGGTGGGGTGGCAGTGGGTAGAACCCCAGCTGGACAGCTCCTTCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 72 bp ACCCTAGCTCTTTACCTCCAGGGAAGCCCCAGCTCATaGGATGGGCACAGCCTCGGGCATTCATGGGAACCT +
Preference number: 6 (lower is better)
Translates to: TLALYLQGSPSS*DGHSLGHSWEP
Trigger: AGGTTCCCATGAATGCCCGAGGCTGTGCCCATCCCATGAGCTGGGGCTTCCCTGGAGGTAAAGAGCTAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 72 bp GGCATGGCAGCCTCATCGATGAGCAGCTCCAGGATGTaGATGGCCACAATGAGCACAGACAGGCCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: GMAASSMSSSRM*MATMSTDRPCV
Trigger: CACACAGGGCCTGTCTGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547813.5
CDS CAA 90 bp GACTTGCCCAGCAGACACATCCATCTAGCCGCCCTTGCCCCTATCTaGCAGAAAGGGAGGCTGAAGAGGCAAAGGCTCCAGAACAGCCCC +
Preference number: 6 (lower is better)
Translates to: DLPSRHIHLAALAPI*QKGRLKRQRLQNSP
Trigger: GGGGCTGTTCTGGAGCCTTTGCCTCTTCAGCCTCCCTTTCTGCAAGATAGGGGCAAGGGCGGCTAGATGGATGTGTCTGCTGGGCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551535.1
CDS TCA 72 bp CCCGGCCCAGGACACCCTACGGGAGGAGGCAACCAGTaGAGAAGGTTAACATCAGGGCAGTGTGGGAACATT +
Preference number: 6 (lower is better)
Translates to: PGPGHPTGGGNQ*RRLTSGQCGNI
Trigger: AATGTTCCCACACTGCCCTGATGTTAACCTTCTTCACTGGTTGCCTCCTCCCGTAGGGTGTCCTGGGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS GCA 72 bp GGAGAAGGGCAGGAGCAGGACAGCACCCAGGGCAATTaGCAGGGTAAAGGTGCACAGCTCGAGCAATACACT +
Preference number: 6 (lower is better)
Translates to: GEGQEQDSTQGN*QGKGAQLEQYT
Trigger: AGTGTATTGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549296.1
CDS CCA 72 bp TGTCAGCAAGCACCTGGAACCAGGGGCTACTCTCCTTaGGGAAACCCAGGTATCCCAAGCCCTACGAAGCCA +
Preference number: 6 (lower is better)
Translates to: CQQAPGTRGYSP*GNPGIPSPTKP
Trigger: TGGCTTCGTAGGGCTTGGGATACCTGGGTTTCCCCAAGGAGAGTAGCCCCTGGTTCCAGGTGCTTGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551143.5
ENST00000552141.5
CDS GCA 72 bp GTCATTGTGTGCTCTGGGAGGCTGACCTCCGAGGTCTaGATCCCACAAGCTCTTTGCCCTCTGGTTTCGCAT +
Preference number: 6 (lower is better)
Translates to: VIVCSGRLTSEV*IPQALCPLVSH
Trigger: ATGCGAAACCAGAGGGCAAAGAGCTTGTGGGATGCAGACCTCGGAGGTCAGCCTCCCAGAGCACACAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CCA 72 bp GTAGCAATCACAGAGCTAAGGAAGGAGCTGTCCAGCTaGGGTTCTACCCACTGCCACCCCACCCTAGCTCTT +
Preference number: 6 (lower is better)
Translates to: VAITELRKELSS*GSTHCHPTLAL
Trigger: AAGAGCTAGGGTGGGGTGGCAGTGGGTAGAACCCCAGCTGGACAGCTCCTTCCTTAGCTCTGTGATTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS TCA 72 bp ACACCCGCCACTAGGCTCGCTACGAGGAAGCGCCGCTaGGGGTCCATCTTTTTAAGAGATCTAGTGACGACA +
Preference number: 6 (lower is better)
Translates to: TPATRLATRKRR*GSIFLRDLVTT
Trigger: TGTCGTCACTAGATCTCTTAAAAAGATGGACCCTCAGCGGCGCTTCCTCGTAGCGAGCCTAGTGGCGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551535.1
CDS GCA 72 bp CATCTCCTTTCCCCAGACCTATTCCTTGTCATTGTGTaGTCTGGGAGGCTGACCTCCGAGGTCTGCATCCCA +
Preference number: 6 (lower is better)
Translates to: HLLSPDLFLVIV*SGRLTSEVCIP
Trigger: TGGGATGCAGACCTCGGAGGTCAGCCTCCCAGAGCACACAATGACAAGGAATAGGTCTGGGGAAAGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CAA 90 bp GTGCTCTGGGAGGCTGACCTCCGAGGTCTGCATCCCACAAGCTCTTaGCCCTCTGGTTTCGCATCCAACAGGAGAATGGAAGGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: VLWEADLRGLHPTSS*PSGFASNRRMEGRK
Trigger: TTTTCTACCTTCCATTCTCCTGTTGGATGCGAAACCAGAGGGCAAAGAGCTTGTGGGATGCAGACCTCGGAGGTCAGCCTCCCAGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS TCA 72 bp CAGTGTGACGACGTCTCCCCTTCATCCAACGTCAGCTaGGTTTGCCCTCAACCCAGTTTGAGAAGCAAACCC +
Preference number: 6 (lower is better)
Translates to: QCDDVSPSSNVS*VCPQPSLRSKP
Trigger: GGGTTTGCTTCTCAAACTGGGTTGAGGGCAAACTCAGCTGACGTTGGATGAAGGGGAGACGTCGTCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551854.5
CDS CCA 72 bp GTGAAGAAGGTTAACATCAGGGCAGTGTGGGAACATTaGAGATGGCAGGCAGCCTGCAGGAACCAGAAAGGT +
Preference number: 6 (lower is better)
Translates to: VKKVNIRAVWEH*RWQAACRNQKG
Trigger: ACCTTTCTGGTTCCTGCAGGCTGCCTGCCATCTCCAATGTTCCCACACTGCCCTGATGTTAACCTTCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CAA 90 bp GGAGGGAGGGAAATCAAAGTACCTGTGGTGAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATGTGGCAGAGGATGTACAGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: GGREIKVPVVNSAGF*KRVRKMWQRMYSVA
Trigger: TGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTTCACCACAGGTACTTTGATTTCCCTCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551535.1
CDS CAA 90 bp GAGGGTATGTTTCCTGTGAGTCCTCCCACGTCTGCCACCATGGTTTaGGCAGTGATTATGACACTAAGACAACAGCTCCTCTCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: EGMFPVSPPTSATMV*AVIMTLRQQLLSGQ
Trigger: CTGCCCAGAGAGGAGCTGTTGTCTTAGTGTCATAATCACTGCCAAAACCATGGTGGCAGACGTGGGAGGACTCACAGGAAACATACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS GCA 72 bp CCCAGGCTGTCCCCAGGAATGTGGTCCTCCCATACATaGCTATCAGTTATGCCAGGTATGATGCCAAAACTA +
Preference number: 6 (lower is better)
Translates to: PRLSPGMWSSHT*LSVMPGMMPKL
Trigger: TAGTTTTGGCATCATACCTGGCATAACTGATAGGCATGTATGGGAGGACCACATTCCTGGGGACAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549587.1
CDS CCA 72 bp AAGGTTAACATCAGGGCAGTGTGGGAACATTGGAGATaGCAGGCAGCCTGCAGGAACCAGAAAGGTTTGGAT +
Preference number: 6 (lower is better)
Translates to: KVNIRAVWEHWR*QAACRNQKGLD
Trigger: ATCCAAACCTTTCTGGTTCCTGCAGGCTGCCTGCCATCTCCAATGTTCCCACACTGCCCTGATGTTAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CAA 72 bp CAAGAAGTGCTCGGTCTAGAGTCCCAGGAGACAGGTTaGCTGAACAGAGGCAATGATGGGTTTCCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: QEVLGLESQETG*LNRGNDGFPEG
Trigger: TCCTTCTGGAAACCCATCATTGCCTCTGTTCAGCAAACCTGTCTCCTGGGACTCTAGACCGAGCACTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547813.5
ENST00000550867.5
ENST00000552449.1
ENST00000552879.5
CDS TCA 72 bp GATGGGTTTCCAGAAGGATACAAGATGAGTACAACCTaGATGACGGCACCAAAGGAGCCCAGCTTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: DGFPEGYKMSTT*MTAPKEPSLEK
Trigger: CTTCTCCAAGCTGGGCTCCTTTGGTGCCGTCATTCAGGTTGTACTCATCTTGTATCCTTCTGGAAACCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547813.5
ENST00000550867.5
CDS CCA 72 bp GGCAGTGATTATGACACTAAGACAACAGCTCCTCTCTaGGCAGCTTCACATCCCTGGCTTCAGCTATTAGTG +
Preference number: 6 (lower is better)
Translates to: GSDYDTKTTAPL*AASHPWLQLLV
Trigger: CACTAATAGCTGAAGCCAGGGATGTGAAGCTGCCCAGAGAGGAGCTGTTGTCTTAGTGTCATAATCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CAA 72 bp GAAATCAAAGTACCTGTGGTGAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATGTGGCAGAGGATGTAC +
Preference number: 6 (lower is better)
Translates to: EIKVPVVNSAGF*KRVRKMWQRMY
Trigger: GTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTTCACCACAGGTACTTTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551535.1
CDS CAA 72 bp GAGGTTGATGAAAACTTGCCCCACTTCCCATCAGCGTaGCTCAGAGTCCCAAAGGAGACAAAGTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: EVDENLPHFPSA*LRVPKETKSKK
Trigger: CTTCTTGGACTTTGTCTCCTTTGGGACTCTGAGCAACGCTGATGGGAAGTGGGGCAAGTTTTCATCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549429.1
ENST00000550867.5
ENST00000552879.5
CDS CAA 72 bp TTTCCTGTGAGTCCTCCCACGTCTGCCACCATGGTTTaGGCAGTGATTATGACACTAAGACAACAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: FPVSPPTSATMV*AVIMTLRQQLL
Trigger: GAGGAGCTGTTGTCTTAGTGTCATAATCACTGCCAAAACCATGGTGGCAGACGTGGGAGGACTCACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552577.5
CDS CAA 90 bp GGAGATGACACAGAGCCTGTGCCCGTAATGACATTCATCCAGCAGTaGCTCACTTCAGGTTCACAAAGGGCTTTCACATTAACCATCTCC +
Preference number: 6 (lower is better)
Translates to: GDDTEPVPVMTFIQQ*LTSGSQRAFTLTIS
Trigger: GGAGATGGTTAATGTGAAAGCCCTTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGTCATTACGGGCACAGGCTCTGTGTCATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000551115.1
ENST00000551169.5
ENST00000551535.1
CDS CAA 90 bp GACAAAGTCCAAGAAGTGCTCGGTCTAGAGTCCCAGGAGACAGGTTaGCTGAACAGAGGCAATGATGGGTTTCCAGAAGGATACAAGATG +
Preference number: 6 (lower is better)
Translates to: DKVQEVLGLESQETG*LNRGNDGFPEGYKM
Trigger: CATCTTGTATCCTTCTGGAAACCCATCATTGCCTCTGTTCAGCAAACCTGTCTCCTGGGACTCTAGACCGAGCACTTCTTGGACTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547813.5
ENST00000550867.5
ENST00000552879.5
CDS GCA 72 bp AGGTTGATGAAAACTTGCCCCACTTCCCATCAGCGTTaGTCAGAGTCCCAAAGGAGACAAAGTCCAAGAAGT +
Preference number: 6 (lower is better)
Translates to: RLMKTCPTSHQR*SESQRRQSPRS
Trigger: ACTTCTTGGACTTTGTCTCCTTTGGGACTCTGAGCAACGCTGATGGGAAGTGGGGCAAGTTTTCATCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549429.1
ENST00000550867.5
ENST00000552879.5
CDS GCA 72 bp AGTGTTGATATCCCAGAATTGAGTAGTCCACTTCTGTaGGCAAGGTTCAGTTGTCGCTCTAAGTGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SVDIPELSSPLL*ARFSCRSKWQG
Trigger: TCCCTGCCACTTAGAGCGACAACTGAACCTTGCGCACAGAAGTGGACTACTCAATTCTGGGATATCAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547670.5
ENST00000551115.1
CDS GCA 72 bp GACACAGTTCCCAATTATCCCACTTCCCATCAGCGTTaGTCAGAGTCCCAAAGGAGACAAAGTCCAAGAAGT +
Preference number: 6 (lower is better)
Translates to: DTVPNYPTSHQR*SESQRRQSPRS
Trigger: ACTTCTTGGACTTTGTCTCCTTTGGGACTCTGAGCAACGCTGATGGGAAGTGGGATAATTGGGAACTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547813.5
CDS CAA 72 bp AGACACAGTTCCCAATTATCCCACTTCCCATCAGCGTaGCTCAGAGTCCCAAAGGAGACAAAGTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: RHSSQLSHFPSA*LRVPKETKSKK
Trigger: CTTCTTGGACTTTGTCTCCTTTGGGACTCTGAGCAACGCTGATGGGAAGTGGGATAATTGGGAACTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547813.5
CDS CAA 72 bp AGCGGGTCAGGAAGATGTGGCAGAGGATGTACAGTGTaGCAAACAGAAGTGTTGATATCAAGTCCCCAGGTT +
Preference number: 6 (lower is better)
Translates to: SGSGRCGRGCTV*QTEVLISSPQV
Trigger: AACCTGGGGACTTGATATCAACACTTCTGTTTGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551854.5
CDS TCA 72 bp GCTCACCACAGGCAGGACATAAAAGTAGGCACTCAGTaGGAAGCAACCACTATTACTGATGATAACCAGGTC +
Preference number: 6 (lower is better)
Translates to: AHHRQDIKVGTQ*EATTITDDNQV
Trigger: GACCTGGTTATCATCAGTAATAGTGGTTGCTTCTCACTGAGTGCCTACTTTTATGTCCTGCCTGTGGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552141.5
CDS GCA 72 bp TTTTCCTTCTTTCTGAACCTGAGGTTGATGAAAACTTaGCCCACTTCCCATCAGCGTTGCTCAGAGTCCCAA +
Preference number: 6 (lower is better)
Translates to: FSFFLNLRLMKT*PTSHQRCSESQ
Trigger: TTGGGACTCTGAGCAACGCTGATGGGAAGTGGGGCAAGTTTTCATCAACCTCAGGTTCAGAAAGAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549429.1
ENST00000550867.5
CDS CAA 72 bp ACAGAGCCTGTGCCCGTAATGACATTCATCCAGCAGTaGCTCACTTCAGGTTCACAAAGGGCTTTCACATTA +
Preference number: 6 (lower is better)
Translates to: TEPVPVMTFIQQ*LTSGSQRAFTL
Trigger: TAATGTGAAAGCCCTTTGTGAACCTGAAGTGAGCAACTGCTGGATGAATGTCATTACGGGCACAGGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417750.5
ENST00000551115.1
ENST00000551169.5
ENST00000551535.1
CDS CAA 72 bp AGTCTAAGGTCACCCCACATACCAGGTGTTCTTCATTaGCATCTCCTTTCCCCAGACCTATTCCTTGTCATT +
Preference number: 6 (lower is better)
Translates to: SLRSPHIPGVLH*HLLSPDLFLVI
Trigger: AATGACAAGGAATAGGTCTGGGGAAAGGAGATGCAAATGAAGAACACCTGGTATGTGGGGTGACCTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552577.5