RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LLPH-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000239335

Ensembl transcript IDs: ENST00000510317.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAACGAGACTCCGTCTGCAATCCTGGCACCTCGGGAGGCCAAGGCTaGCGGATCACTCGCGGTCAGGGGCTGGAGACCGGCCCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: ERDSVCNPGTSGGQG*RITRGQGLETGPAN
Trigger: GTTGGCCGGGCCGGTCTCCAGCCCCTGACCGCGAGTGATCCGCCAGCCTTGGCCTCCCGAGGTGCCAGGATTGCAGACGGAGTCTCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS GCA 90 bp AAACCCCGTCTCCACCAAGACCAGTCAGGTGTGGCGGCGCGTGCCTaGAATCGCAGGCACTCGGCAGGCTGGGGCCTAACCTTGACCGGA +
Preference number: 5 (lower is better)
Translates to: KPRLHQDQSGVAARA*NRRHSAGWGLTLTG
Trigger: TCCGGTCAAGGTTAGGCCCCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACACCTGACTGGTCTTGGTGGAGACGGGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CCA 90 bp TCAGGTGTGGCGGCGCGTGCCTGCAATCGCAGGCACTCGGCAGGCTaGGGCCTAACCTTGACCGGACACCCGTCAGCATTCTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: SGVAARACNRRHSAG*GLTLTGHPSAFSKS
Trigger: GGATTTGGAGAATGCTGACGGGTGTCCGGTCAAGGTTAGGCCCCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS GCA 90 bp AAATCCCGCCTCTCAAGGCTTCTTGAGACATTTTGTCTCCCGGCGTaGAATGCGTCCGCCCCGGGTGGCCTCCGCCCGGAAGACGGAAGT +
Preference number: 5 (lower is better)
Translates to: KSRLSRLLETFCLPA*NASAPGGLRPEDGS
Trigger: ACTTCCGTCTTCCGGGCGGAGGCCACCCGGGGCGGACGCATTGCACGCCGGGAGACAAAATGTCTCAAGAAGCCTTGAGAGGCGGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS TCA 90 bp AGATCACGCCACTGCACTCCAGTCTGGGCACCATTGAGCACTGAGTaGACGAGACTCCGTCTGCAATCCTGGCACCTCGGGAGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: RSRHCTPVWAPLSTE*TRLRLQSWHLGRPR
Trigger: CCTTGGCCTCCCGAGGTGCCAGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGACTGGAGTGCAGTGGCGTGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CCA 90 bp ACCTGTATGGGACGGACCAAGTTTCTAGGTCCGCGATCACACCAATaGCGGAAGCTCGTCAGCGCCCGGGTTCCAAAATCCCGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: TCMGRTKFLGPRSHQ*RKLVSARVPKSRLS
Trigger: TGAGAGGCGGGATTTTGGAACCCGGGCGCTGACGAGCTTCCGCCATTGGTGTGATCGCGGACCTAGAAACTTGGTCCGTCCCATACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CCA 72 bp GCGGCGCGTGCCTGCAATCGCAGGCACTCGGCAGGCTaGGGCCTAACCTTGACCGGACACCCGTCAGCATTC +
Preference number: 6 (lower is better)
Translates to: AARACNRRHSAG*GLTLTGHPSAF
Trigger: GAATGCTGACGGGTGTCCGGTCAAGGTTAGGCCCCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS GCA 72 bp CTCTCAAGGCTTCTTGAGACATTTTGTCTCCCGGCGTaGAATGCGTCCGCCCCGGGTGGCCTCCGCCCGGAA +
Preference number: 6 (lower is better)
Translates to: LSRLLETFCLPA*NASAPGGLRPE
Trigger: TTCCGGGCGGAGGCCACCCGGGGCGGACGCATTGCACGCCGGGAGACAAAATGTCTCAAGAAGCCTTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CAA 90 bp GCGCGTGCCTGCAATCGCAGGCACTCGGCAGGCTGGGGCCTAACCTaGACCGGACACCCGTCAGCATTCTCCAAATCCGACTTCTACACC +
Preference number: 6 (lower is better)
Translates to: ARACNRRHSAGWGLT*TGHPSAFSKSDFYT
Trigger: GGTGTAGAAGTCGGATTTGGAGAATGCTGACGGGTGTCCGGTCAAGGTTAGGCCCCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CAA 72 bp TGCAATCGCAGGCACTCGGCAGGCTGGGGCCTAACCTaGACCGGACACCCGTCAGCATTCTCCAAATCCGAC +
Preference number: 6 (lower is better)
Translates to: CNRRHSAGWGLT*TGHPSAFSKSD
Trigger: GTCGGATTTGGAGAATGCTGACGGGTGTCCGGTCAAGGTTAGGCCCCAGCCTGCCGAGTGCCTGCGATTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS TCA 72 bp CGCCCGGGTTCCAAAATCCCGCCTCTCAAGGCTTCTTaGGACATTTTGTCTCCCGGCGTGCAATGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: RPGSKIPPLKAS*DILSPGVQCVR
Trigger: GCGGACGCATTGCACGCCGGGAGACAAAATGTCTCAAGAAGCCTTGAGAGGCGGGATTTTGGAACCCGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS TCA 72 bp CACTGCACTCCAGTCTGGGCACCATTGAGCACTGAGTaGACGAGACTCCGTCTGCAATCCTGGCACCTCGGG +
Preference number: 6 (lower is better)
Translates to: HCTPVWAPLSTE*TRLRLQSWHLG
Trigger: CCCGAGGTGCCAGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGACTGGAGTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CCA 72 bp GGACGGACCAAGTTTCTAGGTCCGCGATCACACCAATaGCGGAAGCTCGTCAGCGCCCGGGTTCCAAAATCC +
Preference number: 6 (lower is better)
Translates to: GRTKFLGPRSHQ*RKLVSARVPKS
Trigger: GGATTTTGGAACCCGGGCGCTGACGAGCTTCCGCCATTGGTGTGATCGCGGACCTAGAAACTTGGTCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS CAA 72 bp GCGCCCGGGTTCCAAAATCCCGCCTCTCAAGGCTTCTaGAGACATTTTGTCTCCCGGCGTGCAATGCGTCCG +
Preference number: 6 (lower is better)
Translates to: APGFQNPASQGF*RHFVSRRAMRP
Trigger: CGGACGCATTGCACGCCGGGAGACAAAATGTCTCAAGAAGCCTTGAGAGGCGGGATTTTGGAACCCGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS TCA 72 bp ACGCCACTGCACTCCAGTCTGGGCACCATTGAGCACTaGGTGAACGAGACTCCGTCTGCAATCCTGGCACCT +
Preference number: 6 (lower is better)
Translates to: TPLHSSLGTIEH*VNETPSAILAP
Trigger: AGGTGCCAGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGACTGGAGTGCAGTGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510317.2
CDS TCA 72 bp CGAGATCACGCCACTGCACTCCAGTCTGGGCACCATTaGGCACTGAGTGAACGAGACTCCGTCTGCAATCCT +
Preference number: 6 (lower is better)
Translates to: RDHATALQSGHH*ALSERDSVCNP
Trigger: AGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGACTGGAGTGCAGTGGCGTGATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510317.2